LOCUS       DAPPKW010000001        77481 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.001, whole genome shotgun sequence.
ACCESSION   DAPPKW010000001 DAPPKW010000000
VERSION     DAPPKW010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 77481)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 77481)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..77481
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.001"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..2791
                     /locus_tag="RPW04_000001"
     CDS             <1..2791
                     /locus_tag="RPW04_000001"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012772.1,HMM:NF020036.1,HMM:TIGR00229.1,
                     HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HDX6294139.1"
                     /translation="ATENQKMIENLNKEKHLLLSSPILIATFKVDENWKIIQISNNVS
                     DILGYNIEDILFKNFSFRSIIHKEDIANLIVDIKHRMKLIDTPYETDNELDRLCRIKL
                     SNGNYDWFKVFIKISKDANGDMFVTVFMFNSTNQKLTEDIFKDKINKYQNLLWATSGM
                     SFEYDIKKRVYTFSNSFINLLGYRNSDDLGVINSENISKIVYKSDLDKVVLAWDNYLK
                     GLSPSINTEIRCIAKDGRYIWVCIKAKTATSNLDGTPNLISGMLEDITIKKESEAQLQ
                     LIASVFSYSREGIMITDLNGLILDVNDAFVQITGYGKEEVRGKYPNMLKSDRHNNKFY
                     AKIWADIKQSGFWRGEIWNKRKNGQIYPEILTISAVKNQLDEVQHYVAIFYDITYIKE
                     NETRLEKIAHYDPLTKLPNRFLLLEKLAIAMNNVKENGKKIAVIYLDLDGFKKANDTY
                     GHNCGDGLLVAISSRMQGIISNGDNLIARFGGDEFVALINDVSDENALIKILDDMLLA
                     ARDKTVINSNKIQVSTSIGVAFYDRHSDISMEDLLKRADWAMYHAKLSGKNRYYIFDE
                     NRDEIFNQYNESLLSKDKFDSDEFFLMYQPVVNIKDAKITSFEVLLRWKHPQKGIMLP
                     VDFLHIFSDKVWFDELTIWIIINALRDSEDIFNKGIKLSINIPFEQLNDEIFFAKFKD
                     LYKNSDLRFDMLEIEITDAMSVKDIENEILNLVIYEDLGIKFVFDDFGSSLSLANTMK
                     TAPTNTYKINKKYALELLDRADNVDMLQTILNICSAFKKRAIIKGVENEYIYNIVANI
                     GFVELQGNFISKPIFKDDISDMINTIYIKRVFNPNLEKIPLYKFIIYQINAIKQIIIS
                     IENYNTSIFDYSTYRKVYDEFDRLKEVPESCKEADKLITLVFSSNFINKEEIAYLLNE
                     LEHKKLNILNTIIGE"
     gene            2794..3645
                     /locus_tag="RPW04_000002"
     CDS             2794..3645
                     /locus_tag="RPW04_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HDX6294140.1"
                     /translation="MNYTNKIIYEHEIPDGSKLYFGNSAKLKRDIENRASVILEKYGF
                     SEIITPYFSYHQHLSVAPQKLLRFSDSTNHEISLRADSTVDVVRIATKRLKDMSTKKW
                     FYIQPVFKYPSSEIYQIGAEILDSNDLLKCINIAAELFDELHIKPHLQISNIEIPKII
                     CKLLDLPISVFENGRLELILNQNLNWLNRLANIKNDKDIDEVIKIVPSELREPLNSIK
                     DLASGYENRVYAPLYYSKMRYYDKLFFRFLCDNYILSGGGSYEIDGKVSVGFAIFSDA
                     LIENLSK"
     gene            3656..4906
                     /locus_tag="RPW04_000003"
     CDS             3656..4906
                     /locus_tag="RPW04_000003"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009650792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDX6294141.1"
                     /translation="MTKADLIVGIQWGDEGKGKIVDMLSQNYDVVCRSGGGHNAGHTI
                     WVDGMRYALHLVPSGILHKNIINIIGNGVVVNPEVLISEMAQFDHLEGRFFISDRAHL
                     NLAHHSLIDQAKERLKGDKAIGTTGKGIGPAYSDKISRSGHRVGELLDPKALCESLMK
                     DFESNKPYFDALSIEIPPKDKILADLVRFKDVLAPFITNTTELLWRAMDDNKKVLLEG
                     AQGTLLDIDHGTYPYVTSSNTVSAGACTGLGLSPKSIGKVIGIIKAYSTRVGNGAFPT
                     EDLGSDGENLCEIGKEFGTTTGRKRRCGWLDVVGIKYSSRLNGVDTYALMKLDVLDGF
                     KNVKICKAYEYKGEVIDYFPSDLQNATPIYEELEGWDSINGIKKYEDLPLNARKYIER
                     IEELTGVKIGFISTSPERNDTIVR"
     gene            4903..5328
                     /locus_tag="RPW04_000004"
     CDS             4903..5328
                     /locus_tag="RPW04_000004"
                     /inference="COORDINATES: protein motif:HMM:NF014144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar FliJ family protein"
                     /protein_id="HDX6294142.1"
                     /translation="MNNKFTQVVKVKEENVNKIELSLAKCRALDKELKKSMGAIIDEL
                     NLHRFPRGGSSADIKINLEEQKLLREQKERIKEKIILNQKEIVHYEFQHKKAYIELEK
                     MKYLEKEETAKEIAKIKKQEAKDLDEIAVQRYSFMKDAK"
     gene            5325..5858
                     /locus_tag="RPW04_000005"
     CDS             5325..5858
                     /locus_tag="RPW04_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleosidase"
                     /protein_id="HDX6294143.1"
                     /translation="MKFALVFCFLFVSLNLIAADDWDAIYEAKKAEITREFERIDSAR
                     QELEAYRAATKSLFDKREAEISKKELDVNRTLDEISKKEENIKNMLAKNEKILEELKT
                     MTSDKVLEVYAKMKDSPAANIISSLPRDEAAKILYALEPKKISSILSKMDPATAAELT
                     EILKKDDLFTDNNSSVK"
     gene            5985..6536
                     /locus_tag="RPW04_000006"
     CDS             5985..6536
                     /locus_tag="RPW04_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF507 family protein"
                     /protein_id="HDX6294144.1"
                     /translation="MRIKLPHAPYIARKVGLDLFNCGFVSFKSGIEPVASVVQSILEN
                     DINKERALEDKVKEVLDQNENEMDFMQVDRKNMFWLIKKKLAKDFGVILSYEDRYSSV
                     SHEILELLWKKDLIDYSVSDNRVKNIIYGAIENYLKSYEDIEDIVVDRLANYKRKLIA
                     GTDEYDLIFEKLYEEELHKKGMI"
     gene            6536..7654
                     /gene="carA"
                     /locus_tag="RPW04_000007"
     CDS             6536..7654
                     /gene="carA"
                     /locus_tag="RPW04_000007"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HDX6294145.1"
                     /translation="MKAYVYIENGVYLEAKAFGKGGSAFGELVFNTSLTGYEEIITDP
                     SYAGQFIIFTMPEIGIVGVNENDEESAKIHASGVFMRNFNQTPSNFRSEKSLEKFFYD
                     QGKFGIYDLDTRYLTKMLRDSGNLRAFVSTEISDKEILKHELENSARIDEINYVSIVS
                     TKKPYIHSKNSWKHQKQSYGNLSSIGKKVAVIDYGVKRNILNELCEAGLEVEVYPHNV
                     KADFLIDKFKKGEINGVFLSNGPGEPKMLVNEIGEIKKLIAADLPIFGICLGHQLLSN
                     AYGYETYKLKFGQHGANHPVLNLETKSIEITAQNHNYNVPETISEVATVTHRNLFDNT
                     IEGVRYNGGKVFSVQHHPEASSGPNESKYIFKNFIEIL"
     gene            7654..8319
                     /locus_tag="RPW04_000008"
     CDS             7654..8319
                     /locus_tag="RPW04_000008"
                     /inference="COORDINATES: protein motif:HMM:NF024778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDX6294146.1"
                     /translation="MDISTVFSIISIALMFSISHCIGMCGGFVMAYNAKLSNKTRKEI
                     VFLSISYHLSRVFAYVCLGIFFGFFGSIVILNLKTKGFVFFIVGVFLVILSIALIKRG
                     NLLAFIENDKIGNLIMRFFKKFSKRNDALSFMILGFLNGLLPCGVVYYFLALSLSSGS
                     IFNGFLVMFIFGLSTLPVMLIFSGTVGLVSAKFKHTMTIATSVIIAIYGVYLSYLGFM
                     AIK"
     gene            8316..9554
                     /locus_tag="RPW04_000009"
     CDS             8316..9554
                     /locus_tag="RPW04_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018137488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HDX6294147.1"
                     /translation="MIDLSERLKQYQAAIDTSNIVSKTDIEGYITFVNDEFCKISGYT
                     REELIGKPHSIVRHPDVPSENFKILWETILAKKVHRAIVKNKAKDGSAFYLNTTIIPI
                     LDEKGNIEEFVAIRHNVTEVVLLNERLLKTQNELTDLNSLLEQKVAEQTKKLIDLNKN
                     LEQRVLQEVAKNEEKTKLMFQQSRLANMGEMLANIAHQWRQPLNELSIDLFRLKQAVN
                     TPNSEFLDIYDHSKTVIKGMSNTIEDFRNFFNSNTKKESFLVSSAVEDAAIMLQRTLE
                     KDGIKLDFSYDKNIFLTGYKNELAQVFVNLFTNARDAFREINIDNKLIKVSVKQSKGF
                     VILKIQDNAGGIKEDIKDKIFEPYFTTKHPIVGTGLGLYMNKKIIEKFNGDISVHNVK
                     FGTCFEIKIPTLVEKGDNDE"
     gene            9547..10227
                     /locus_tag="RPW04_000010"
     CDS             9547..10227
                     /locus_tag="RPW04_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDX6294148.1"
                     /translation="MSDILKSLTVLFVEDEDKIRTSMGSAMEGIFAKVILAGNGDEGL
                     KKFKKFNPDVIVTDISMPIMDGLDMSKEIRDISKDTPIVILSAFSEKEKLLKAIEIGI
                     DKYIIKPIDMEELFEAISVLAQDKISTTNIVEIGGGYSFNKTKRVLVRNQEEIALTKK
                     ELAFISILVKRLGTLVLHEEIKNSVWVGEKVSDAAIRTFIKRIRDKVGANLIKNIPGL
                     GYKIETNL"
     gene            10387..11853
                     /gene="ccoN"
                     /locus_tag="RPW04_000011"
     CDS             10387..11853
                     /gene="ccoN"
                     /locus_tag="RPW04_000011"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HDX6294149.1"
                     /translation="MQPSNALNYDYTVAKYFMFTTIIFGIVGMGIGTLIAFQMAYPDL
                     NYLAGEYGTFSRLRPLHTNGVVYGFMLSGIFATWYYIGQRVLKVSMNESKFLMFIGKL
                     HFWLYVIVIALAVVSLFAGLSTSKEYAELEWPIDILVVIVWVLWGVSIFGLIGIRREK
                     TLYISLWYYIATFLGVAMLYLFNNMEVPTRLVSGMGSWLHSVSMYAGSNDALVQWWWG
                     HNAVAFVFTVAIIAQIYYFLPKESGQPIFSYKLSLFSFWGLMFVYLWAGGHHLIYSTV
                     PDWMQTMGSIFSVVLILPSWGSAINMLLTMKGEWGQLRENPLIKFMVLASTFYMFSTL
                     EGPILSIKSVNALAHFTDWIPGHVHDGTLGWVGFMTMAALYHMTPRVFKRELYSKSLM
                     EAQFWIQTTGIVLYFASMWIAGITQGMMWRATDEYGNLAYSFIDTVTVLIPYYWIRAI
                     GGLLYLIGFFMFSYNIIKSISSSKPVEREPVSASPMAA"
     gene            11864..12529
                     /gene="ccoO"
                     /locus_tag="RPW04_000012"
     CDS             11864..12529
                     /gene="ccoO"
                     /locus_tag="RPW04_000012"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HDX6294150.1"
                     /translation="MFSWLEKNPFFFAVFVFIFIAYAGIIEILPDFADRARPVEGRKP
                     YTVLQLAGRHIYIKDSCNACHSQLIRPFKSETDRYGMYSISGEYAYDRPFLWGSKRTG
                     PDLWRIGNYRSTDWHENHMKDPTSVVPGSIMPAYKHMFNKNADIETAYAEAFTIKKVF
                     NVPYDAEDMPKLGTWEATQAMVKEEAAAIVGQMKDQDVKDAFARGEIREIVALIAYLN
                     SLK"
     gene            12540..12770
                     /locus_tag="RPW04_000013"
     CDS             12540..12770
                     /locus_tag="RPW04_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase, cbb3-type, CcoQ subunit"
                     /protein_id="HDX6294151.1"
                     /translation="MSVETIRELQAYGYFVLLVAMVVLLYGYWFHLKKSEKSGRRDYE
                     KYSNLALKDELRDDILENVSTNNNNAKRSVEK"
     gene            12767..13630
                     /locus_tag="RPW04_000014"
     CDS             12767..13630
                     /locus_tag="RPW04_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDX6294152.1"
                     /translation="MKWFNLEDSVNSLSILGAIAIILLTLIVVGRLFKLMKEKKEGGE
                     LSEDNWDGIGEYKNPLPIGWAIVFVLTIVWAIWYFLLGYPLNSYSQIGEYNEEVKAYN
                     KSFQAKFEGASAEELKAIGEQVFLVQCSSCHGITGDGINGKAADLNIWGSEKAIYDVV
                     VNGSKGLDYPLGEMPGGMVDEPTAKAVAAFVAKEISAIKSTYNENLVAAGREAWPTCA
                     ACHGDDGKGMDGQAPDLTKYGSGSFVVDVLNRGKIGNIGHMPKFTGSGILNETQEKAV
                     GEYVISLSKGE"
     gene            13632..13850
                     /locus_tag="RPW04_000015"
     CDS             13632..13850
                     /locus_tag="RPW04_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4006 family protein"
                     /protein_id="HDX6294153.1"
                     /translation="MENTNRSVFGISGVSGMLIATVLLLTILVVLTYLGILSQQNVMQ
                     KPYKLVDPASVQMKSSTKQASEVMVIKE"
     gene            13966..14550
                     /locus_tag="RPW04_000016"
     CDS             13966..14550
                     /locus_tag="RPW04_000016"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294154.1"
                     /translation="MLKSGFLAALCSFGLNAATIDNAGVLSEPIKSKLNEMGAELKET
                     TGVTLDLITFSNLNAASIDEAIKPFKSNLKPPYVILVLVPKEAGATTGKVDIYTSNDA
                     NSLFDKEAVLSPYPESGSILPILVSNKGKDIYNAAMLNGYADIADRIADSKGVVLKSS
                     IGNSNRNTINIFRYLIYGSIILVIVVFAIRKIKR"
     gene            14554..15087
                     /locus_tag="RPW04_000017"
     CDS             14554..15087
                     /locus_tag="RPW04_000017"
                     /inference="COORDINATES: protein motif:HMM:NF017559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HDX6294155.1"
                     /translation="MQNRKTFWPYGILLSIFAIVCACIYTVYYSLDYPVHLDNFYFDK
                     YQNVENGYNEIQIKQAKFDQDFKFNQNATIYIDGLLNKNEPQKLRRNKIVPVVDKNKN
                     VELVFDTNATNLKAELLLSRPDTNQFNKSLNFKLEDNKFRISDLNLTMPGRWQVMMKL
                     AANDDSVGFFKFELYAK"
     gene            15068..17428
                     /locus_tag="RPW04_000018"
     CDS             15068..17428
                     /locus_tag="RPW04_000018"
                     /inference="COORDINATES: protein motif:HMM:NF024117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HDX6294156.1"
                     /translation="MNYTPNRILNVLSSSRNVREFYIVNSRSNSLVSKAITIARFEQQ
                     IVIVPNLKKASQIDRLLIMQKAAKSVQNISSVINVGSQFFAFLKNSDYLFSFFKELKR
                     EFVSIKDLVRSDTYANYDEHLSILEELLKLYLIMLKEAGFYDDISLPDEYQINYDFIK
                     NYDEIKIKLDGIFSKLDWYILCEISKYVSVIIEFSSSKFNQKTIESISEICETSFEIG
                     FDYVLNLSRKTVISKVKIEKNTDIKLKSFSIRSLQCAYVFDEISNFVRCGIDPKKIAV
                     VLPDESFYEILKNADERNMLNYAMGKSFTTEPVFVLLNTLKSALDQDLVYEYDESYLS
                     KNSSLDSLISALNYFKFDTDLYSNLNKIYNQSCDFDRFNSAISSIISKFTLSIEVKTI
                     LLNEAFLIGALLQNTSLRFGSLFEIFLMNLKEAKLSIVGGAEVTVMGVLESRSGNYDG
                     VIIIDFNDDIVPKRSQKEMFLSSSVRKKAGLISHQDRENLQRFYYESLINRAKKVSIS
                     YLSDEESILSRFARDFSFRIDEKYTQNAYLNSLKSGGIKLSLEKKDIYLRHDFFATEL
                     SFSRLNTYLACKRKYYYRYILGIKEYRGFDKDISSHLGSTIHSALQEYFSKFKTKFVK
                     KEFLELFKKYENTIDTLDSEIFKAGLAKFEESQNTHFNSGFSVFECEKELKNEFCGVK
                     ITGKIDRIDKSADTFMLIDYKSGTVPKKSFQLSFYEALFGHNSISFYYDIKNEYKFIP
                     NDTNTDELAQCINGLKDEFKNEVCFDRNEKACQYCAYFVFCKKELK"
     gene            17425..20190
                     /locus_tag="RPW04_000019"
     CDS             17425..20190
                     /locus_tag="RPW04_000019"
                     /inference="COORDINATES: protein motif:HMM:NF010487.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RecB-like helicase"
                     /protein_id="HDX6294157.1"
                     /translation="MSFSRYLALEASAGSGKTFALSVRFIALILQGNDIAKILALTFT
                     KKAANEMKSRIIDAFCNLHESSKKNELNELEKILELSAVDILSLRDKYMGNFLKNELK
                     ISTFDSFFTMILRQFSLNLGIMPDFKAGTSLNGLTRSEFIKNLKQNHLLESFAFYIKE
                     TNSNKNRVFETLELLYENISLPSFGENSKIPDESYVFAKFSELKSLALEISSDKNFLK
                     NFEANTVSQIAGKPLIKEFDSKKYFEKAALNAKFMMIRDELISNLKKYYLEYEQFKIN
                     ELLKFIYLYKYSRFEAIKKENALDFIDVTRLVYELLGNIDSDMLYFRLDDRIKHILID
                     EFQDTNIIQYDILLPLIEETLSGSGQNDIGSFFYVGDIKQSIYRFRGGRKELFSRLRN
                     SYKQIETLSLESNYRSAKNIVNFVNQTFSNKIKYYKTQLSCLENEGYVEVCEFVSDEF
                     YDTLFQKIEFFVKNGVRYDDIAILCWKNSDIINIKDKLEKSGVPVATGGSNLLINSAN
                     VRVVLNFIKYCLFGDEIYIYSVHEFIGEKKSKLSLNATAELASTLKFVASYLNLECFD
                     KNLLKLYEISLGYADIFDFIFNIQNDQTPSADTSHCGITLLTVHKSKGLEFDHVIVAD
                     RLSRAGSNIDVFITEYNNSEQKWDIKLNDSALQNLGDSEFINLKQKCKDLDYEEDINK
                     LYVALTRAKNSLIVMSKLDSNGLKPSYFKAFTSSKEQICYLDLKPFSVGKIEPSKTSM
                     SFYGGLERLEEFETIKKQAVSDKQNDEYELNLESIYFGEALHYCLEMIFDFEEENLKN
                     AKTALINQFGAILSKNSIEDIINRVLNLINSVEFKNIIKDKNILKEQDIAFNQVIKRL
                     DLLCIGDDEIVVMDYKSSKKFITQNEDQVREYMSILSQIYPQKRVVGKIIYLLNDKVE
                     FLNVDLI"
     gene            20269..20694
                     /gene="rplM"
                     /locus_tag="RPW04_000020"
     CDS             20269..20694
                     /gene="rplM"
                     /locus_tag="RPW04_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDX6294158.1"
                     /translation="MTNITKPSEVKRDWIVLDAAGKRFGRLLTEAATYLRGKHKPGFT
                     PNVDCGDYVIIINASKAEFTGANKAEAKLYHRHSGYFGSVKSEKFGDLLVNKPEKLYK
                     LAVRGMLPKTKLGKEMLKKLKVYAGNEHPHTAQIAKEGK"
     gene            20697..21086
                     /gene="rpsI"
                     /locus_tag="RPW04_000021"
     CDS             20697..21086
                     /gene="rpsI"
                     /locus_tag="RPW04_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDX6294159.1"
                     /translation="MATTYATGKRKTAVAKVWVKPGSGKIIINGMDLNTWLGGHEAIK
                     LKVVQPLLVTKQETSIDITATTIGGGYSAQAEALRHGISRALAAIDADFRAALKPQGL
                     LTRDSRVVERKKCGRRKARRSPQFSKR"
     gene            21386..22423
                     /locus_tag="RPW04_000022"
     CDS             21386..22423
                     /locus_tag="RPW04_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDX6294160.1"
                     /translation="MKKIALAICVASALFGANAYNYEFTPVVGYAHPEGTQGIDDQNF
                     VGLRIARNLDEFLLSQIELGFDYSKNVSFEHKNGVPVGFETDVTRYYLNLVKDFAITD
                     TISVYGLIGVGYQDFTREANDVEDGGFAQAGLGLKYKITDNFALKAEARDALDWNNGS
                     NTFLYTLGFAVGFGESRSAAPAPVLVEEQPAPAPTKIVPAIGDEDGDGVLDNVDRCPG
                     TPKGVVVDEYGCEKVIRLSLKANFAFDSAKVTPEYEAKIKEVADVMVANPEYRVILEG
                     HTDSTGPEDYNKKLSVKRADAVAATLEKMGVSKNKITTVGFGEEQPIASNATKEGRAE
                     NRRVEAKFRNK"
     gene            22429..23253
                     /locus_tag="RPW04_000023"
     CDS             22429..23253
                     /locus_tag="RPW04_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HDX6294161.1"
                     /translation="MDFIQNIDYMSVLALSSKYAIKFIVSILIFFIGKWIISKLAIVL
                     EKIIKRTKIDPMLGNFVINSARTMLFIFVILAALSNLGIETTSFVAVLGAVGLAIGMA
                     FKDTFGNVGAGVLIIFFKPFKLGDNIEIGGSVGVASDLNLFSTCLRTGDNKIIIIPNS
                     QVISSRIINYSLSPTRRVDLVFGIDYKDDLKLARDIILDIAEKKDTILKDPAPFVGVL
                     SLGDNSVNLTAKFWTNNENYWSVYHQMLEEVKLAFDENGISIPFPQVVTHHVYEKQ"
     gene            23262..23912
                     /locus_tag="RPW04_000024"
     CDS             23262..23912
                     /locus_tag="RPW04_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HDX6294162.1"
                     /translation="MPKTTILFDLDGTLIDSTSSILNGFHSAFSKFGFAQPNDEQICS
                     LIGHPLDYMFCSLGVPNSLVLNFVDTYKEAYRKTYLEQTKLLDGAKEAVELASNIADI
                     GVVTTKTSKYSICLLEHLGIGKYFQTVVGKDDVINPKPHPEPILKALSNLNKSNQNAY
                     MIGDTSMDAMAAKGANIISIGVSCGYEKIDNLFKICDWVEKNPKEAVERVNIISNL"
     gene            24102..27656
                     /gene="nifJ"
                     /locus_tag="RPW04_000025"
     CDS             24102..27656
                     /gene="nifJ"
                     /locus_tag="RPW04_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005870812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HDX6294163.1"
                     /translation="MDKVMKTMDGNEAAAYAAYAFTEVAGIYPITPSSPMADYTDIWA
                     SQGKKNIFGMPVKVVEMQSEAGAAGTVHGSLQVGALTTTYTAAQGLLLKIPNMYKIAG
                     QMLPGVIHVAARSIAAQALSIFGDHQDVYACRQTGFAMLATGSVQEVMDLAGVAHLAA
                     IKGRVPFLHFFDGFRTSHEIQKVEVIDYSVFDKLVDKEAIQKFRDESMNPESPKTRGT
                     AQNDDIYFQTRELVNKFYDDLPDVVAHYMDEISKETKREYKPFVYYGDKKPDRVVIAM
                     GSVTQTLEEVVDYLRSKGEKVGIVKVHLYRPFSLKYFFDVIPKSVKKIAVLDRTKEPG
                     SLGEPLYLDIKAAYYGSKKSPTIVGGRYGLSSKDVDPAQMVAVFENLKQDEPKNNFTV
                     GINDDVTNLSLEVGDKISLSDDDCIECLFYGLGADGTVGANKNSIKIIGDKTDLYAQA
                     YFAYDSKKSGGYTRSHLRFGKKPIRSTYLVSNPHFVACSVAAYLDIYDVVDGLRDGGT
                     FLLNSIWDADETVKRIPNKVKRLLAQKKANFYILNATKLAYDIGLGNRTNTIMQSAFF
                     KLANIIDFKDAQNYMKEYAKKTYAKKGDKIVEMNYAAIDQGADKLVEIKVDPKWAKLK
                     DEVISENKYIGDDFIEKVVKPMNAARGDDLPVSVFLGYEDGGFEAGTTEYEKRGVGVM
                     VPKWIEENCIQCNQCAFVCPHAVIRPFLIDEKELSAAPKGVKSHVLDAKGKEIKEFKY
                     KIQVSPLDCTGCELCAQNCPSKEKSLVMVPLGEEMDKGEQENADYLFKNVKYKDDLMS
                     KDSVKGATFAQPLFEFHGACPGCGETPYITLVTRLFGEHMMVANATGCSSIYGGSAPS
                     MPYRKSNKNGHGVAWANSLFEDNAEFGMGMEVATETIRHRIENIMRDTMDKVPNALAA
                     LYKDWIEFKGDITKTAQIRDMLVPLLEANKKVDGVKDLLSLKKYISRKSQWIIGGDGW
                     AYDIGYGGLDHVLASGENVNVLVLDTEVYSNTGGQSSKSSRSGSVAQFTSSGKAVQKK
                     DLGQIAMTYGNIFVAQINSNASQANVVKAIAAAEAYNGPSLVIAYSPCIAHGIKGGLS
                     LSGDQAELATKCGYWPTFIYDPRLVKEGKNPLKITSKEPEWDRYEEFLLNEVRYNSLK
                     KLNPEHAAELFSQNKADSQRRYRQLRRLANADFSDELA"
     gene            27768..28328
                     /locus_tag="RPW04_000026"
     CDS             27768..28328
                     /locus_tag="RPW04_000026"
                     /inference="COORDINATES: protein motif:HMM:NF036646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5416 domain-containing protein"
                     /protein_id="HDX6294164.1"
                     /translation="MDKAFIIEEILDDSATDATTAAYSGNFNEYKITASKHMQGFYII
                     SDIVKNRDETNIFDNSIKMFVFKDCVKSFDELILNLESNPKNKVRFSNSLTIDNGNIS
                     DIKVYIFGFDETKDSFLFDPNKFPRNAVYKYRISKDEFHAHMSLNLDQRLAKNFIESF
                     AFSSDYGFENKKISVIINEIYRYEIL"
     gene            28355..28966
                     /locus_tag="RPW04_000027"
     CDS             28355..28966
                     /locus_tag="RPW04_000027"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-4 component G"
                     /protein_id="HDX6294165.1"
                     /translation="MQIGDFNSNSMFGFLNIKPDSPENIEKIKESASKIDAKNITQNY
                     FLQFQNNTFSNTSGNINVQVGLMSFSLPEPFMPGNSNNSSGLSSGLSDLISKNISQTG
                     YTGKPISSLSQGEAKALISENGYFGVTNTADRIAGFVISGAGDNLEKLQSGLEGVKRG
                     FTEAEKLWGSKLPDISQETMSKAISQINQRISELGGNTLNVTA"
     gene            28953..29381
                     /locus_tag="RPW04_000028"
     CDS             28953..29381
                     /locus_tag="RPW04_000028"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294166.1"
                     /translation="MSLRNMLVISVLSMFAFSGCGVTSAPKPKPTPKPPVAKVIPKYI
                     KGTIAKIEQAEGGWKYDIRGIETSNSKLKFASAISSENGFKVGDLVYAQIEGSKITYI
                     SLIIQNYANPEKSKQILKVHKRDKSKQSKIAAPVAEKLNF"
     gene            29599..30819
                     /locus_tag="RPW04_000029"
     CDS             29599..30819
                     /locus_tag="RPW04_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major outer membrane protein"
                     /protein_id="HDX6294167.1"
                     /translation="MKLVKMSLAAIVAAGALTSVASATPLEEAIKNVDVSGFARYRFD
                     STKVDANGNQGSDTKASHRFTSYVHFKTALDDNFFAVLGLRYDSKDVSGDHITGGQTQ
                     VGVNDAGAGDFGQTFNVRQFLLGYKAGNTTIQAGRQVLGTFFTDDMVGTGIKVLNTDI
                     TGLTLAAVAFDDLQNDPDIGSRGLVVNGSHTYQNNLYGVAAIGSYDPVSFQLWYAMLE
                     NVTDLYAIDVAVNFNATADLALGLHGQFGGSSIDSDFKRGTNNSADDANLWAIEATAE
                     GFGIDFSAGYIDFSADKDKVSVVSYEDAGSFIKPGEDLLDYTLFNGENKYWFITAGYT
                     FLEKYRVGVDYIDGENKTNILKTDKTELVGRVSYAYSKKLNFKAWWSHITEEPDNAGK
                     DKTDHFRFEAKYSF"
     gene            31096..32316
                     /locus_tag="RPW04_000030"
     CDS             31096..32316
                     /locus_tag="RPW04_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major outer membrane protein"
                     /protein_id="HDX6294168.1"
                     /translation="MKLVKMSLAAVVATCALSTVASATPLEEAIKNVDVSGFAMYRFD
                     SAQSDMNGKDTKAYHRFKSDFNFKAALDDNFFGVVGFRYDSRDVSGDHITGGQANVGQ
                     QDVGFDNYGQTFNVRQFLLGYKAGNTTIQAGRQVLGTFFTDDMVGTGIKVLNTDITGL
                     TLAAIAFDDLQLDTNIGTKGLVVNGSHTYQNNLYGVAAIGSYDPVSFQLWYAMLENVT
                     DLYAIDVAINFDATADLNLGLHGQFAGSSIDSDFKKGTNNLADDATFWAIEAMAKAYG
                     VDFRAGYVDLSADDKKVSVVSFEDQGSFIEAGEDLFDTYSFFYGDNHYWFGALGYTFD
                     KFRVGIDYVNGKITKATSNGKVNAYEVVPRVSYAYSKKLKFQAFWSHYQIDEIDGKND
                     FKNDHFRFEAKYVF"
     gene            32440..33009
                     /locus_tag="RPW04_000031"
     CDS             32440..33009
                     /locus_tag="RPW04_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDX6294169.1"
                     /translation="MNFLKKPLLFICLACFMYAADLADDSSYVIEAKGDFGKELKALV
                     EKYAKDENVSINVYKKSPQDNSGGFINIGVDKNRAYNASKGEELYNANCKHCHGDKGT
                     SRAMGVSQRLADMSAEDISASMSGYNSDPTFGGKLKYIMQPMAKNVNFSQVGDIIAYI
                     KGNDAFAIEDNIKNSNISTKPTQQGSYLE"
     gene            33154..34272
                     /locus_tag="RPW04_000032"
     CDS             33154..34272
                     /locus_tag="RPW04_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002853461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDX6294170.1"
                     /translation="MKKISLVASIALVAATSLMAKEIKIGVVMPITGAVAAYGQTAWA
                     GIEMANKLEPTLKNGDTLKLILVDNKGDKVETTTATTRLVSDDKVTGLIGAMVTGNTQ
                     QVLQIADEKKVPMIAPAATADKLLDRAKYGARVTFMDSFQGTSFATYAAKSLGLKTAV
                     VVVDQSTSYSIGLAKAFKKQYEKDGGKVLKELKISSGDKDFKAIVSQIGSLNPSIVYM
                     PFYHPEAALVVRQARQIGLKTQFASGDGVSNDTFIELAGDASNGYFYTDAFDSSNPPT
                     DKSKEFVAAYTKEKGDGNVPGFTALGADSYFLMVDAMNRCENPEDRECVNKKIKETKN
                     FEGVSGIINIDSKGNAIRSVVIKEVKDGRAVYKDTVNP"
     gene            34547..35443
                     /locus_tag="RPW04_000033"
     CDS             34547..35443
                     /locus_tag="RPW04_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HDX6294171.1"
                     /translation="MDSSLFLQQMVNGFSLGSMYALIAIGYTMVYGVLRLINFAHGDI
                     MMVGAYAALFSMTSLSLPFGFALLFAITVAIILGVFTDRIAYKPLRKAPRISLLITAI
                     GISFLLENVFQVIFGGTPRSFPVPSYFEQLVTIGSVNLAMTAILVPIITLFLLSVVLF
                     ILYRTKYGMAIRALAFDISTVHLMGIDANMIISIVFALGSSLAAIGGVFWALNYPSID
                     PLMGVLIGLKAFAAAVLGGIGSVGGAVLGGFIIGFTEVVAVALFPDLAGFKDAFAFIF
                     LILVLLFKPTGILGYNFEKSRF"
     gene            35446..36501
                     /locus_tag="RPW04_000034"
     CDS             35446..36501
                     /locus_tag="RPW04_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HDX6294172.1"
                     /translation="MCICKFRYVLFVALAVGFLFLSNSYFSEYSLRIVNNIAIFIILA
                     ISYNLINGVTGQFSLEPNGFVAIGAYAAALLLLNSDSKLYQFDVTEPSSIILAIHTTN
                     FIFAMLVSGICATILALILAMPVFRVRGDYLAIVTLGFGFIIQLLAVNFPAYTNGSLG
                     LNEVLRVDGDGNISRYTNIFYSGSVAIIAVVAILNLIYSKFGRAMKAVRDDEDAATAM
                     GINTFRVKTLAFCVSAFFEGVGGALLVGLLGSVSPDQFTFMFTFQLLIIIVLGGLGST
                     TGAILGTILVIGGSEWLRFLDEPMNIFGYETPAFPGLRMVVFSVVLIFVMLFARRGIM
                     GQMELGELFNKFKKVGK"
     gene            36498..37262
                     /locus_tag="RPW04_000035"
     CDS             36498..37262
                     /locus_tag="RPW04_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6294173.1"
                     /translation="MILELKDISKSFGGVQAIAKTSFGVSEGEIFGLIGPNGAGKTTM
                     FNIITGAYTPTSGEIRFNSILLNSVKPHKIVSLGIARTFQNIRLFSSLSVLDNVLIGL
                     NNSTKYSFLEAISHIGRFRKSENLAKQRASEILEELGIFKFRNEFANSLSYGQQRKVE
                     IARALATNPKLLLLDEPAAGMNPSETDELAELIFSLRNKNKLSILLIEHDMKFVNRLC
                     DKVLVLDYGKVIFEGLPSDAVQNKDVITAYLGDFLE"
     gene            37259..37954
                     /locus_tag="RPW04_000036"
     CDS             37259..37954
                     /locus_tag="RPW04_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6294174.1"
                     /translation="MINVKNLHVYYGVIEAVKGINFSVETGQIVSLIGSNGAGKTSTL
                     NALINSVKRTGEISFLGYETRRHQTHTIVRQGISLVPEGRRVFINLTVEENLKMGAFN
                     NSENYEHLRDAMYEFFPRLRQKKDQLAGTLSGGEAQMLAISRALMSEPKLLMLDEPSL
                     GLAPKIVGEVFDIILKLKEEGITILLVEQNAFLALKISDYTYVLENGHIVMEGNSKDM
                     IGNDEIKKKYLGA"
     gene            38025..41099
                     /gene="ccsA"
                     /locus_tag="RPW04_000037"
     CDS             38025..41099
                     /gene="ccsA"
                     /locus_tag="RPW04_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDX6294175.1"
                     /translation="MDIFKKLFLSMGSAVILFLIFAISSGVATIIESVYNTQTAWAIV
                     YGAGWFALVQLLLGANLAYNIVRYKLLNLKKLPALIFHVSFIFILLGAALTRYIGFEG
                     QMHIRESGESNEISTSQSYIQLKSFDEGKTYIASEPKYISSAWGNSFKLSLDVDNKPA
                     ILTYKSFMPNATSAWVQSDKGEPVLELIFSNDTNSRSVTLKENESIEVGDISFTFNDT
                     PKQSKFINIVLKDGKFFIKTNQNIDYMQMSDMSRGSIPKDKIVPFEGLRLYSIDGINF
                     APKTMLASAIKGVRQVSDNERGSDAIIATLSYNGDSKEISMLNFMPGDTVVVGGKNFE
                     ATWSPMMIKLPFSLYLKDFELKRYPGSNSPMSYSSDVIVKDGDLNMDYKIYMNHVLDH
                     SGYRFFQSSYDMDELGTILSVNKDPGKIPTYIGYFLLGLGLFLNILNPYSRFRKLAKL
                     VNEANIKNAAVFLIACSVIFGVSDLQAYNSLPTISKEHAQNISTIVVQSADGRMKPFD
                     TVSHEVLNKLYRSDNYNSMNANSVFLSMMVNSSYWRNVPIIKITDKELKKVLEMPINQ
                     KYASFNDFFTKDSSDNMEYKLIKYSELANRKSPGARNQFDKDVIKADEKLNILYMVFM
                     GELFRVIPKKDDVNNTWFSPAGAIMSFSPSEAREVTTLLQNYFDGVAIAQDSGNWEKA
                     DKTLNDIKDYQKKYGAAVMPNQKKIELELAFNKYKIFQNLTPVYLLAGFALLIVVFTR
                     MIRPKIKINSVFKIVYIINILAFAAHTIGLGLRWYIAEHAPWSDSYESMVFIAWSLAF
                     SGMVFARSSAISLALTSILAGVTLFVAHLSWIDPQITTLVPVLQSYWLTIHVSVITAS
                     YGFLGLCSLLGLFTLVLFALQGKKENSELSRNILEATRINEMAMILGLSLLVFGNFLG
                     GVWANESWGRYWGWDSKETWALVSILVYAAIVHMRFVPKVNSQYAFAVASMFGYLSII
                     MTYFGVNFYLSGMHSYAAGDPVPVPNFVWVAFAVMIVISLLAYRNKKYSKNL"
     gene            41166..41606
                     /locus_tag="RPW04_000038"
     CDS             41166..41606
                     /locus_tag="RPW04_000038"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty-acid--CoA ligase"
                     /protein_id="HDX6294176.1"
                     /translation="MNEKLISGIIALIIIALIIIFILVIVMVAKNKPKAKTVHIAINK
                     DSKGLDIEDLISIVSDKKSTKEDIFKASQYFIKNFKIPPKLDGKAPPESKIYLRFIAL
                     VAAHKNSDAKIIAYIDNEIKKSNSKYGNEIDKYERNGIARRTRF"
     gene            complement(41596..42048)
                     /locus_tag="RPW04_000039"
     CDS             complement(41596..42048)
                     /locus_tag="RPW04_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HDX6294177.1"
                     /translation="MQKLFLTFFYVGLMKPAPGTWGSIAGAVIAVLILKYLGAQTLFL
                     ASILLFLASINIINKYEETTKEHDQSHIVIDEVAGVWLAISISSASWLAIILSVIFFR
                     ILDITKPSIIGRVDKNVKGGLGVMGDDMIAGAFAGLMSAICYWVLLKI"
     gene            complement(42069..43247)
                     /locus_tag="RPW04_000040"
     CDS             complement(42069..43247)
                     /locus_tag="RPW04_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002944399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase"
                     /protein_id="HDX6294178.1"
                     /translation="MISQRKNSTILINQEAYGTLVLIQNQILSKFTRLMNEKEAKISE
                     ESGYFEGEPMPYAYTFAPYGKRNQETIKNAKKGDRIDILKDNQIIGHIIVSSIFKLSN
                     ITHSIFRARDIELPENQRAGEFAVSGEFVIYEDDLRQIKQNIHNIIKQKNIKKVTALM
                     LTADPFHRLHERLVRMTIDKADITILFLIRTFGSDRRLSFDLRKRTLELFRDNFLPRE
                     RVIIVPFENTYLFSDHINPVLECLAAHNFGATKLVVGQNHGGIGMFYNDNQANTVLDK
                     YAKDLNIDIIIMPELVYCNQCRTIVSIKTCPHGQHHHIKYHPQTLKELLFEGIIPPAI
                     LMRKEISSMILSELFPNKFKNLQKIYDDLFPNSGILESHSQREFYEELMRLYQTTSLT
                     "
     gene            complement(43225..44115)
                     /locus_tag="RPW04_000041"
     CDS             complement(43225..44115)
                     /locus_tag="RPW04_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDX6294179.1"
                     /translation="MKVLIIENEIYLAQSISSKLADFGYSCEIASCTTDALKDDKFDV
                     VLLSTGLIGQDFYQVIKKHSRSIIILLISYISNDTVSNPIKAGADDYIQKPFMIEELV
                     RKIKLFESYKKYEILNKTYQSLIESFVKTYKTPKYDFKKLRMPFLIVTDKNQYADSFV
                     FNYAKELNLAYEIIDLDSENTADIIKNLKPNSFIYITEFDKLKADSRDEFLNLISNQN
                     VVISSNVDLNILNLDKVIINTNDKGLQADEILTIDEYVKHMILCYQDTFPDTELSKRL
                     GISRKSLWEKRKKHDLTKKK"
     gene            complement(44112..45230)
                     /locus_tag="RPW04_000042"
     CDS             complement(44112..45230)
                     /locus_tag="RPW04_000042"
                     /EC_number="2.7.7.60"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase/2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase"
                     /protein_id="HDX6294180.1"
                     /translation="MLDLSLIMLGAGNSTRFGLQSKKQWLRTGDDPLWLYATKNISSN
                     YLFKDVIVVSNECEYMRKFSSHFKFIKGGETRQDSLRNAISNINSEFVMVSDIARADI
                     PKELITKLIESAHNADCIVPALKISDSVIYQNEYINRDELKLIQTPQLSRTNMLKKAL
                     KTDNIFTDDSSAIKAIGGTVWYIEGDERAKKLTYKDDLKRLNLNSPSNDIFCGNGFDV
                     HAFKEGDFITLCGVKIPYSKAFIAHSDGDVALHALCDALLGAASAPDIGELYPDNDSK
                     FKDIDSKILLQNSVNLIRSIGFDIINADITIIAQSPKISPYKDAMAKIVADILGIPLH
                     KVNIKATTTEHLGFIGRNEGIAANAIVNLKYFNWRNVL"
     gene            45382..46734
                     /gene="thiC"
                     /locus_tag="RPW04_000043"
     CDS             45382..46734
                     /gene="thiC"
                     /locus_tag="RPW04_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HDX6294181.1"
                     /translation="MRKDWCEARKNDPTPTQMYYAKNGVITPEMEYVAKVEMLKPEYI
                     RQLVAEGKLIIPANINHTNQIPMAIGKAVKCKINANIGSSALASDINEEIEKLKVCLK
                     YGADTVMDLSTGGDLDEIRRAIIANSTVPIGTVPIYQIIHDIKDLDNLTPQIMLECIE
                     KQAKQGVSYFTIHAGFLLKFMPLVAKRKMGIVSRGGSLMASWMMKHHKENPFYEAFDE
                     ICDICAKYDASLSLGDSLRPGCLHDASDEAQMSELAVLGELTKRAWEKNVQVMVEGPG
                     HVPFNQIEFNMKEEKRLCHDAPFYILGPLPTDIGAGYDHITSAIGGTMAAFHGASMLC
                     YVTPKEHLGLPNAKDVRDGIISHKIAAHAADIALGRVGAIERDHAMSDARYKFDWNKQ
                     FELALDPDKARELHDESLPQDVFKEAEFCSMCGPKFCAYKISQEIAKIECSDYPKEKK
                     "
     gene            46731..47807
                     /locus_tag="RPW04_000044"
     CDS             46731..47807
                     /locus_tag="RPW04_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HDX6294182.1"
                     /translation="MTNEQILEELKKVIYPGFKKSIVEFGFVKEVDPDIVVEIVSAKP
                     EIATKVKQDIESLNLDRKIIIQTPKLEEEKSNSRSGKNIAPQIKNFVMVSSGKGGVGK
                     STTTLNLAISLAKQGKKVGLLDADIYGPNIPRMLGCQNEQPSVVGQRLKPILTHGIEM
                     MSMGILIEAGQGLMWRGAMIMKAITQLLNEVMWSDLDVLFLDMPPGTGDAQITLAQSV
                     PVTAGICVSTPQTVALDDSARSLDMFEKLHIPVAGIVENMSGFICPDNGKEYDIFGKG
                     GTSELASQYDTEILAQIPIEPSIRVGGDSGKPVSFYEPNSVCAKRYEEAAAKLWEKIE
                     SINADGGADNSAIQPDNSGKAACH"
     gene            48028..49218
                     /locus_tag="RPW04_000045"
     CDS             48028..49218
                     /locus_tag="RPW04_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrahydrodipicolinate N-succinyltransferase
                     N-terminal domain-containing protein"
                     /protein_id="HDX6294183.1"
                     /translation="MSIKNQDELKKFTDEIRSKSGYKDPFAFAIGRVQKGKGGKTISV
                     NYSVVNFKENYGSAAVLTWAIEKNGLKIDFSDTEFTVPLTAPAISDALEVFDFLVPQS
                     EGDKHRNIQNLLVLDEILNEENGSESEFVVTFIYEDAAPKSVESVYLKLYLLSLNKVE
                     IRSINLNGAFGILPNLAWDAHSQPYELDYLRENEIWLKMKGWYPNIISVDKFPRYLSH
                     IIPADNTRILDSAKVRMGAQLAPGTTVMPGAAYINFNSGTTGAVMVEGRVSSCVSVGE
                     GSDVGGGASILGVLSGTNGNAISVGKKCLLGANSVTGVPLGDDCIVDAGVAILEGTKV
                     FIDEKNRYELAKINPDFKFEKEIYKALELSGLNGLHYRQNSQNGQITASISKRAIKLN
                     ADLH"
     gene            49231..50814
                     /locus_tag="RPW04_000046"
     CDS             49231..50814
                     /locus_tag="RPW04_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012140170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDX6294184.1"
                     /translation="MLEVKSLTQRFGQQLLFEDVNLKFNAHNRYGLIGANGAGKSTFL
                     KILSGETDYTSGEIVIENGKKVGVLGQDQFAFESFTLKDAVLYGNKRLYDAVKEKEKL
                     YMSEEFSDEVNERLSELEIISAEEDPTYEYETRIEKILSSLGLYNFDKLMSEVESSDK
                     FKVLLAQVLFPKPDILFLDEPTNNLDLDAISWLERELINHEGTLVVISHDRHFLNRVC
                     THILDVDFKQIREFVGNYDDWYIAANLMSRQAEMERSKLLKEKEELEKFIARFSANAS
                     KAKQATSRSKQLEKLQIGEIKTSSRRDPSILFRTNREIGNELIELSNLNKSFEDKIIL
                     KDFNFKMNKGDKVAIIGSNGVGKSTLCKIIMGELAAQSGKVHIGATIELGYFAQDSSN
                     KITGNLKLYEWLQDAKNKDLDEIRKCLGRMLFSGLEQEKEVGSLSGGEKHRLMLSKLM
                     LQRANVLVLDEPNNHLDLEAIIALGESLYNFSGACICVSHDRELIDAFANRILHIKGN
                     GDIVDFKGTYEEYRLSLES"
     gene            complement(50909..51628)
                     /locus_tag="RPW04_000047"
     CDS             complement(50909..51628)
                     /locus_tag="RPW04_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009650540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase iron-sulfur subunit"
                     /protein_id="HDX6294185.1"
                     /translation="MSRKIKIRAFKYNPLSKVSKPHFAEYELEETDGMTLFIALNQIR
                     EKFDPGLSFDFVCRAGICGSCGMVVNGRPQLACRTLTKDYPSGVIELMPMPAFKLLKD
                     LSVDTGNWMNAMSKKVESWIHTNKETDISKMEEKVDPEAAQETFELDRCIECGICVAS
                     CGTALMRPDFIGAVGLNRVARFKVDPLDNRSDDDFYELVGDDNGVFGCMSLLGCEDNC
                     PKHLPLQSKIAYMRRKLATVK"
     gene            complement(51621..53609)
                     /locus_tag="RPW04_000048"
     CDS             complement(51621..53609)
                     /locus_tag="RPW04_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase flavoprotein subunit"
                     /protein_id="HDX6294186.1"
                     /translation="MNVKYYDALVIGGGLAGLRAAVAAGEKGLSTVVLSLCPVKRSHS
                     AAAQGGMQASLGNSKMSEGDNEDVHFADTVKGSDWGCDQEVARMFVQTAPKAIRELAS
                     WGVPWTRITKGKRSAIINAQKTTIDEKDEVHGLIHSRDFGGTKKWRTCFTADATGHTM
                     LFGVANEALKHNVEVHDRKEAIALIHENNRCYGAIVRDLVTGEITAYVAKGTLIATGG
                     YGRIYKHTTNAVICEGIGAAIALETGVAKLGNMEAVQFHPTPIVPSGILLTEGCRGDG
                     GLLRDVDGYRFMPDYEPEKKELASRDVVSRRIMEHIRNGKGVKSPYGEHVWLDISILG
                     REHIEKNLRDVQEICQIFNGIDPADEGPKGWAPILPMQHYSMGGIRVKPNGESQTLKG
                     LFSCGEAACWDMHGFNRLGGNSVAETVVSGMIVGDYFAQYCDENEIDIQTQTLEKFVN
                     KTESYLKELLNKDGKYNVFEIKNKMKDIMWEHVAIFRTGDGLAKAVKELEELYKESTN
                     VKLSNKELFGNPELEEAYRVPMMLKLALCVAYGALLRTESRGAHYREDYPKRDDLNWC
                     KRTLTSWKEGDTMPTVEYEELDIMKMEMPPAFRGYGAKGNIIENPLSAKRQEEVDSLR
                     AKLEAEGKSRHEIQEALMHYELQPKYKALNERAGIGYE"
     gene            complement(53606..54382)
                     /locus_tag="RPW04_000049"
     CDS             complement(53606..54382)
                     /locus_tag="RPW04_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase cytochrome b subunit"
                     /protein_id="HDX6294187.1"
                     /translation="MSKQIEGFLGISESGKKSRIPARLDLIQSGTGLFLGLFMWLHML
                     FVSTILISDNAFNTIVHLLELRFISDSPNMSYVTSFIAAGVFVIFFIHAALGMRKMPI
                     NFRQWQIYRAHTVRMKHEDTTLWWIQACTGFIMFFLASAHLIIIITNSDKLSADLSSQ
                     RVFSHFMWLFYLVLLFAVELHGSIGLYRLCVKWGWFEGNNAKESRKKLKKAKWILSVF
                     FIVLGLLSLAAFLKIGYNNYTTGNWKTAQVFQIPSNGVRV"
     gene            complement(54643..55473)
                     /locus_tag="RPW04_000050"
     CDS             complement(54643..55473)
                     /locus_tag="RPW04_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDX6294188.1"
                     /translation="MNNLSSWNLIYQNMNPVAFEIFGLSVHWYGIMYVLALIVALMAA
                     KYFAKKDKLNISDSLLDNYFFWVEIGVILGARIGYILIYDPNSSYYLFKPWEIFNPFH
                     NGEFVGIRGMSYHGAVVGFIIATLLFCKKKRQNIWMLLDLVAISVPLGYVFGRIGNFL
                     NQELFGRVTDEPWGIMVAGQLRHPSQLYEAFLEGAIVFAILYFYRKFKKFDGELIAMY
                     AMLYTVARFISEFYREPDFGIGFVAFGMSMGQILSIFMFVFGLAVYLNLKLKRVKTEK
                     "
     gene            complement(55466..56017)
                     /locus_tag="RPW04_000051"
     CDS             complement(55466..56017)
                     /locus_tag="RPW04_000051"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294189.1"
                     /translation="MKVSQAYSIIALIFANNFAKAMNEENLKKLTNSWVIKTENIENE
                     KGLELWQKALQTDDTNSIESDLASFGGACVLKFFKQVSEEKVDEFYKSINFNKPFKEL
                     KSSHISNMLALLSAILKNDTNDKSHALLGLYLSEYLLPSTVLFAKFIRYNAKTYYYKA
                     LGEFLIDYCKILKSTLGLRMEIE"
     gene            complement(56075..57217)
                     /locus_tag="RPW04_000052"
     CDS             complement(56075..57217)
                     /locus_tag="RPW04_000052"
                     /inference="COORDINATES: protein
                     motif:HMM:NF013015.1,HMM:NF023227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HDX6294190.1"
                     /translation="MFLHIDLDCFFVSASRTVNPDLNGKVVAVAGGNKTDIFGDFIES
                     GVIVSASYEARRLGIGCTMHSSIARKIYPNIIILPTNFNLYKTLSNNLFKLLLDYTDE
                     IEKYSIDEFFLNLKGTKFENDPLNFAKILQNRIKNELKLPSSIGISETKFIAKFATNL
                     AKPSKIKIINDISEIQNYEIKMFPGVGASAENFLKSHGVIYIKDVFNAQKIFAKLGKN
                     GLILYSRICGKSRDQIHKNRPRKSLCIARTFKEIRDRNIIEKRLMVLCRYVSFEVFML
                     GVNPTKFELKIKYKNNRNINASVTKHSIFTQKLLETSIKELFLKHDKTSDFAITYLSV
                     GVGGLNEKAQMSLFDIQNKKDKAISDTLAKIRLKYGVNAIKSGGEI"
     gene            complement(57220..59379)
                     /locus_tag="RPW04_000053"
     CDS             complement(57220..59379)
                     /locus_tag="RPW04_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HDX6294191.1"
                     /translation="MANSVKLNITGMTCVNCANAIEKSTKKLDGVISSKVSFAESSAV
                     FEIDDNSRLETIKSKIKKLGYGIVANYDELEAVKQKEVLNLKNKLIIAAIFSTVTMAL
                     EMTGQDNFFKSLFLLLLTSIVIFYCGVGFYKHAISSLKNRNYDMNVLIFLGTLMAYLY
                     SIFTFIIPEAIPQNMRYLYFSGASMIITFVLLGKFLEERSKIKAGNYLKTLMDLSPKT
                     ALILTKDGSSVSIPTSELKIGDIVVVKNGYNIPCDGIIVSGGAEIDTGALTGESLPVY
                     KSVGDNVNAGTLNTNGYINIKVTKRDSDSLLSQILNLLANASSQKMPISRLADRVANI
                     FVPSVISISIATFLIWTMLDTPTRGILAAISVLIISCPCALGLATPIAIISGISVGAK
                     NGILIKNPEVMEVMKDIKYAVFDKTGTLTKGEISVINTNLNSDDLKIAINAEALSEHP
                     ISKAIVRYDPDKVDKSLSFEFKNIPGMGIDANNGEILIGNIKLLNSFDIDISSEHLNE
                     INKILDSGFGIVLVAINKQYKGYITLSDTIKDDAKQSIKEIKDLGIIPVMLTGDNEKT
                     ALVVAKELEIDKVMAGVLPDGKFEIINSLKQDGSKVIFIGDGINDAPPLKAADIGIAM
                     SSGSDIAKDVGDIILIKNDLKSVLFSINLATNTMKVIKENLAWASIYNILCIPVAAGV
                     LYPFFGLLLTPMYAALAMSISSVSVVLNSLRLRIMKF"
     gene            complement(59388..59591)
                     /locus_tag="RPW04_000054"
     CDS             complement(59388..59591)
                     /locus_tag="RPW04_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002799685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal transport/detoxification protein"
                     /protein_id="HDX6294192.1"
                     /translation="MKFVVDNINCEKCAQTIKNSLEDDFGKIEIDLSVNPRILSCDLQ
                     NSDKQKFKSELEDLGYKVIKEID"
     gene            complement(59588..60145)
                     /locus_tag="RPW04_000055"
     CDS             complement(59588..60145)
                     /locus_tag="RPW04_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDX6294193.1"
                     /translation="MIRNATKNDAKRVIELLNLAMDNIAFTLSGTTDIKISNTILEEF
                     FRSTNNRLSYENILVFEFKNEVIGAICIYESKMAKELDIAFINRLKSLGIEPNIKVEC
                     DTQNNELYIDSIAVDENHRGKGVAKQLIEASFLRAKELGINLSLLVDEAKSDVKSYYK
                     RVGFKPCGNKEILNHKYIYMIKEIK"
     gene            60483..61679
                     /locus_tag="RPW04_000056"
     CDS             60483..61679
                     /locus_tag="RPW04_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004276034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HDX6294194.1"
                     /translation="MSLFGTAVGAGILFLPIKAGVGGIWPVFIMAILAFPMTFLSHRA
                     LARFCNASAKKQSDITDVCEEYFGFKWGYIITFLYFFAFFPACIMYGVGITNTVMSFM
                     TYQLGFGEINRFLVCFVVITLMMFVMIFNEDLVIKVCEWLVYPLCALLLMFSLYLIPH
                     WKFEVFSYVPSITDFGITIWFALPVLAFAFEHTPAISTFALSMQRHYGDSHKDYKCNQ
                     ILFYNAGLLLFFVMFFVISCVMSLDRNDFLLAAQQNIPIVSYFANKLNEPVISYFGPI
                     IAILAIATSFFGHYFGAREGLNGLVHKTCVKFGKKEPNKKKIAKITAISFYIVMFVLS
                     YLNPSILGIIDTLAGPVIAAVLFLLPMIGIYNVPALKKYRSKFADLFIVLFGSATVLT
                     VLFKIF"
     gene            61731..62438
                     /locus_tag="RPW04_000057"
     CDS             61731..62438
                     /locus_tag="RPW04_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDX6294195.1"
                     /translation="MGRAFEYRRASKEARWDKMSKLFPKLSKAITVAAKEGGIDPDMN
                     PKLRTAIATAKAQNMPKDNIDAAIKRANGKDSSDIKTIFYDGKAAHGVQIIVETATDN
                     PTRTVANVKSIFSKNGGEMLPSGSLNFMFSRKAIFEVVKPSGDIEELELELIDAGLTD
                     IEENDGTLTIYGDYTSFGTLSEGIEKMGLEVKKGSLQFIPNSTVNLDESAIGELERLL
                     DKLEDDDDVQAVYTNIE"
     gene            62464..62955
                     /locus_tag="RPW04_000058"
     CDS             62464..62955
                     /locus_tag="RPW04_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002949776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDX6294196.1"
                     /translation="MREDLKVYEIDKDELAKLKYAVIKTDKGDMVAELFGDDAPQAVT
                     NFATLAKSGFYDGLNFHRVIPNFVIQGGCPLGTGTGGPGWRIKCECVNQKHRHLRGSL
                     SMAHAGRDTGGSQFFVCHSPQPHLDGAHTVFGVLVDDASKKILDSIRQGDKIQTVEIK
                     ESL"
     gene            63159..64469
                     /locus_tag="RPW04_000059"
     CDS             63159..64469
                     /locus_tag="RPW04_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:dicarboxylase symporter family
                     transporter"
                     /protein_id="HDX6294197.1"
                     /translation="MSTVVKSQRPVFVRTITNLAFWVVLGIVLGVIVGFAWPELGIAS
                     KPGIDWFIKILKWMIGPIIFLTIVSGIIGLESLKEVGSIGFKGFVYFEVVSTLALAVG
                     ISAAYLLQPGVGMNLDVNALDPASVAKYVKDPKEVGSALAILKSAIPTDPITPFIKAN
                     TLQVLFMAIVTAIVLSFMPNNYKKTCMKPLEFAQHYVLKILAWFMWFSPIAAYSAMAY
                     LIGKFGLSSLIGMIQLLAVMAVACIIFIFVVLGIICYVAKVNIFKFMRFIAKEVLVVF
                     ATSSSETALGPLMKKLEAAGISRGCVGLIIPTGYSFNLDCTNIYLSMSIIFLAQAFNI
                     DLSFTHLLSILIILMITSKGAVGVTGSGFIVLAGTLGALHDVIPVVTVAVLLGVDKFM
                     SEMRAVGNLCGNSVACLIVAIWDKKIDMEKFRYALDHPDEFSFN"
     gene            complement(64531..65136)
                     /locus_tag="RPW04_000060"
     CDS             complement(64531..65136)
                     /locus_tag="RPW04_000060"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012257.1,HMM:NF024934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HDX6294198.1"
                     /translation="MKTFRFYSSLSPEHQKLLDDNSTFIKLDVGTELYRQGDTCPNLM
                     FLTKGKVRVVRQHESGQSILLYYFSQGEQCNVNFTSTFNAMPAIGTAIAESDLEGYTI
                     PTSIIAQMFIEDKAFQTYVFEQYAKRMEHMAALIEDIRFLGLDSRILHFLQSKKSKII
                     NLSHEELADIIGTSREVISRILKSFEKNGIVKLSRKKIELV"
     gene            65338..67719
                     /locus_tag="RPW04_000061"
     CDS             65338..67719
                     /locus_tag="RPW04_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001979875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HDX6294199.1"
                     /translation="MLNSRRNFLKGLALSSAAVASMKADELLSPVQKVAHASNFGPFY
                     ALTQDGKIIDILPHPMDKRPTAMTKMWLDRVYSPTRIKYPCVRKSYLEGKLGHEKLRG
                     KEEFVRVSWDKALELAYNKIQETPKENIYNATYIGWSHPGGIHSCPSLCGRFFNVAKR
                     GAIGTAGEYSNGAAGAVNVDIIGDVEKYSLQTTHEQILEHTKTYVLWGADLFKCNKID
                     TKVPSRENDLYYSKYAKSSINFISIDPIYTETAQMLNARWIKIRPNTDIALMLGMMNY
                     LYTSGKYDKEFIAKYTDGFDKFLPYILGKTDGVAKTPKWASKITTIDEKTIMELANLF
                     VKDRTFLAGNWALQRAQHGEMADWCLIVLASMIGQIGLGGGGVGFSMHFGGGGQARAI
                     VGTPAGISQGRNRVEDRIPASRIADAILNPGKKYTYKGKERVYPTVKVAYVAGCSIVG
                     HHPDTNNIIKALRTLDTFIVQEPWWTPTAKMADIVFPACTTLERNDIAMGGVHGKNGV
                     YAMKKAIEPLYESKSDLEIFSLLAQKFGDKVYNKFTDEKPNEMDKIKYEYDISPTAEL
                     MSFENFWEQGYIELPRNEESYKFVRHSKFRNDPVTNKLATISGKIQIVVPKFADLGYK
                     DFKGHPAWIEPDEWLGDKNRKYPLHLLSPHPSYRVHSQGDNTYLRSFYKINDREPVMI
                     NPNDAKKYGIAHGDVVEIYNDRGRVLAGAYVSKNISEGVMALNEGAWYSPENSSEDKP
                     RCVSGHVNVLTSNRPTSSMAQATSVNTNLVGIKKATGVIPPNTAYNPPKIIEA"
     gene            67721..68245
                     /locus_tag="RPW04_000062"
     CDS             67721..68245
                     /locus_tag="RPW04_000062"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294200.1"
                     /translation="MKKIVLILSLSAVVFASSIYVKSDENILQLKDAKVYFGTPGVVI
                     KDGDKSKIVKFEGYFDNANPNTLYATKNFKLPLLESVNLKKDGEKASIELEILNSNLT
                     SDWQIAWEDSGDVFYDKCTKCHGTHAPKEFDMLSWEGLYISMKDRAQPTDNQEMQILR
                     YLYAHANDGILEER"
     gene            68368..70017
                     /locus_tag="RPW04_000063"
     CDS             68368..70017
                     /locus_tag="RPW04_000063"
                     /inference="COORDINATES: protein motif:HMM:NF014567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDX6294201.1"
                     /translation="MKIIDAIYTRIEEFKIYIVISAFTVIFLGITIFSLNKVKDEFVS
                     LAKDYRITITTELASYVTEWMDSRVSSVNSYSAILSSLILEDNITTDRLYNAIDILSK
                     TNPMFDTFQLYLQNDRLLIHAGKYLVIDQKDLDRIAKFAWYKDTKDHNITTIRVMPNH
                     KTLNEKTINICSPLIAHGKFKGVLCGIIRTKNILQQIKGVDKDIVSHLFLMDKNHDII
                     TSYYQPNPFASSLKNIDSNFSSKEFVSGGMKVSVLKTSMQDWAVGVGIDENSIISKSL
                     NVVAKTSIMIFGFFIMLIIVANSLHNYMYKKVKKRKQEYEFILTHQLKMIETGELIGV
                     ISHQLKQPLNSTKLMISSVLQLKEDKNISEEDEKNSLKLCLDSMEHLNKTIENFKNFY
                     KFDPSQNEFSIKKSINNLLEILHINFTKHNVSVSINECDDITITNSQNMFQQVLLVLL
                     QNAKDALIAFYPHEFKKRHIEIEISSDDKNVYIRVIDQAGGISSGIIKKLFSNLKISQ
                     KDGGSGIGLYFAKKIANERLKGDLKLVSARNPTIFELRMQK"
     gene            70014..70697
                     /locus_tag="RPW04_000064"
     CDS             70014..70697
                     /locus_tag="RPW04_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDX6294202.1"
                     /translation="MRLGKLKGVDILVVEDCDMARTALKLGLKPYCRCYYEASNGYEG
                     IEIFKNHKIDIIITDIHMPLLNGLEMIEEIKKIKPQQSFIVITSYDTDENFFRSIKDG
                     AMQFIRKPLVIEDVQNALLLAISKKEDKIFKISSNIRVNLSNETIFDGEKQLFLTNIE
                     NKLLWLFCYNINMVVTYDMIEEYVYDSLDVKKGSIHTAVLRLKKHLDGINIENISAKG
                     YILRKFSEN"
     gene            70766..71455
                     /locus_tag="RPW04_000065"
     CDS             70766..71455
                     /locus_tag="RPW04_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HDX6294203.1"
                     /translation="MRVNLLIKKCIAAAAVFGAINAAAFSEGVDFVKLETPIPNSDGL
                     VTKVYSYDCPFCYKYDKAVTKAVMQKLPEMKFEPMHLATKGKFGKQASELFAVLIAKD
                     NASGTNLLDDKSLFKKAKFAYYKAYHDKKERWGGDANNQENVNAFLSVGFEASGINKA
                     DLEAGLKDEKVKAMLERWGMDANSGYAYGVAKIQGVPAFVVDGKYLIYTKAIKGIDAM
                     AELIKYLHTLK"
     gene            71466..72113
                     /gene="dsbI"
                     /locus_tag="RPW04_000066"
     CDS             71466..72113
                     /gene="dsbI"
                     /locus_tag="RPW04_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide oxidoreductase DsbI"
                     /protein_id="HDX6294204.1"
                     /translation="MEFFKDLKSDPIGKVASLQDERAIWIIMVVAMSGLVIVAHSLFQ
                     NYVYMAPCEQCVYIRFSMLVMALGGVIAAINPKNIILKIIGYVLGFYGAIIGMMYCIK
                     LNSIHHAVHSEDPFGVQGCSAEPSFPFGLPLDMWAPDWFKPTGDCGYDNPIVPDDVSL
                     SWLQQWFVDFYSEGWYLIPSLKFMNMAQACFIAYAVAFILLFAMFICWILKLKRA"
     gene            72281..74071
                     /locus_tag="RPW04_000067"
     CDS             72281..74071
                     /locus_tag="RPW04_000067"
                     /inference="COORDINATES: protein motif:HMM:NF012801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDX6294205.1"
                     /translation="MKKIIAIAVVCGFSLACAKNLADPDVAWRIKPFGLPKPLTNRSI
                     LNPAIENNFDFTQRQSYYYANDVIDKNRDALHISGGFIGKSYSGAATYDIKTDNADAH
                     IGTYYHNLGDYKGGNGKYQGVGYERNAQDFGIKLRPKDNFSLNYTFIRDEIIDDLLPS
                     NALETIRNTRYLNNLKVKIGEQDNSNTLNLGFSYGEIKRYRSNEYKRLPNMVKFDSKT
                     ATYSFLGEYAYKLNDMQNFVGVSYKSKTKDGYRRLANGTITGWGFPGLDIDNYRVYNT
                     FIYELSESHALSLGLNYDWFYSDASKLNSKVSNGKSLNDEYERIYGERMRDNDYSGLS
                     AKLRYDYKNNGYKSYLQLASLYVAPYLYNSLNVYNYMPNSSPYLYNIGAPNLKSSRHN
                     LAQISSSYNDNAGFSFTYDSIEDLVIYDRLRSSDATLDGTIIRRNVNADYLNAKGWVK
                     FDVIDNLSIKSSLTYHYGQNRSDDRPLYQIRPIEFNTNLDYKQNTHFGQWSVGSALRW
                     VGAQSRGDWDKSIGLGSDLKDSAKAFATVDLYSGINIKNRFGVRFGIANIFDEDYSEF
                     INPNHLDVITPSFAIKAPGRTVFMSFNASF"
     gene            74153..75961
                     /locus_tag="RPW04_000068"
     CDS             74153..75961
                     /locus_tag="RPW04_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011992260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aryl-sulfate sulfotransferase"
                     /protein_id="HDX6294206.1"
                     /translation="MKTKILSSILVAGLLLGVGATNALGVGGASGPVTYKSVGKIGAV
                     KMNPYKMAPLTAVILNGGYDLSDAKVTVKAKGEKGIDISYDVSNSQLLTHGGIPVFGL
                     YADYVNKVEVSYKRNGEAMSETYSIYAPPVFMNVTGTNQTSVLPKAEVVKMDPKFKDR
                     LYFINHIVRASTPDSGQAVWNHPVGGAMEWDNEPYNWIVDANGDVRWYMKADEIRDPD
                     NIYKKGNMMGFSQTKDGSLLWGMGQRYMKYDLLGRQIYDRKLPAGYIDFSHHIEEMPN
                     GHILMRVASSDQKRSDGKNVRTVRDVIIEVDESGNVIDEWKLYKILDPYRDVNILALD
                     QGAVCLNVDASKAGTTTDKEALEDPNAAFGDIAGVGAGRNWAHVNSVNYDPNDDSIVV
                     SVRHQSAVVKITRDKKVKWILAPKAGWNKELATKLLTPVDKSGKKLDCDDNGVCENSD
                     FDFIWTQHTAYKINEKSDKSKYALSVFDNGDARHNEQPAIPTMKYSRAVEYAIDEKKM
                     TVKQVWEYGKDRGFDWYSPITSVVEYQKDKDSMFVYSATAGLGKMLQKIGKTEPIINE
                     IDYGTQKVGVEMKFTNMGLTIGYRALPISTKEAFSK"
     gene            76111..>77481
                     /locus_tag="RPW04_000069"
     CDS             76111..>77481
                     /locus_tag="RPW04_000069"
                     /inference="COORDINATES: protein motif:HMM:NF012239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HDX6294207.1"
                     /translation="MGDFLSQIWGISKLYIKNDYKRVVSSDEAAILLCVSPKNYDRYL
                     TLVSFKEIFKRLELDLNEYSVQLMQIAVLNGISSLEIDFDSTKKSLEELAKNDIISFS
                     DFKRITQFLDSLRLAKKRSLDKQGSAFHKNLETLNEICLDLKKYGYKELEKRINLAYD
                     SANNSKFYLAVTGVINAGKSSTLNALMKKQLLGASNIPETANLSIITYSKDEFAKVVF
                     WSEDELIKMGLEPKKLISKKVDIGELKNYTTAANEISRYVKEVILGIDLDILKDGINI
                     VDTPGLDDAVVLREELTKAYMQESDFTLHLMNASQSATKKDISFIINTLKNGKSGGLI
                     IVLTHIDKLSKNDLKEVLNYTKNSIKTELNDYGFSEELARDTQYFMVSAVQNEGIDEL
                     KNYLYESFFGPNSKKATLIIDNYKKELTHIINFITKDLKYRNSVINGDAKEFGQKLAL
                     LENELEK"
BASE COUNT        26394 a        11512 c        14612 g        24963 t
ORIGIN      
        1 cgcaaccgaa aatcaaaaaa tgatagaaaa tttaaataaa gagaaacatc tattgctttc
       61 aagccctata ttaatagcta cttttaaagt agatgaaaac tggaaaataa ttcaaatttc
      121 taataacgta tctgatatat taggatataa catcgaagat attttattca aaaattttag
      181 ttttagaagt ataattcata aagaagatat agcaaattta attgtagata taaaacatag
      241 aatgaagctt atagatacgc cttacgagac ggataatgag cttgataggc tttgtcgtat
      301 aaagctttca aacggcaatt acgactggtt taaagtattt atcaagatat caaaagatgc
      361 aaacggcgat atgtttgtta ctgtgtttat gtttaatagt acaaatcaaa agcttacaga
      421 agatatattt aaagataaga taaataagta ccaaaatcta ctttgggcta cttctggaat
      481 gtcttttgaa tatgatatta aaaagcgtgt atatacattt tcaaatagct ttataaattt
      541 actaggatat cgaaatagtg atgatctagg agttattaac tctgaaaata tatcaaaaat
      601 agtatataaa agcgatttag ataaagtagt tttagcgtgg gataactatc taaaaggact
      661 tagtccaagc ataaataccg agatcagatg tatagctaaa gatggaagat atatttgggt
      721 atgcataaaa gcaaaaaccg cgacatctaa tcttgatgga actccaaatt tgatatctgg
      781 aatgcttgaa gatatcacca tcaaaaaaga gtctgaagca cagttgcaac tcatagctag
      841 tgtattttct tactctagag aaggcattat gataactgat ctaaacggtt tgatattaga
      901 tgtaaatgac gcttttgttc aaatcactgg atacggcaaa gaagaagtaa gaggcaaata
      961 tccaaatatg ctaaaatcag atcgtcataa taataaattc tatgctaaaa tatgggcaga
     1021 tataaagcaa agcggttttt ggcgcggtga aatttggaat aaaagaaaaa acggtcaaat
     1081 atatccagaa attctaacta taagtgcagt caaaaatcag cttgatgaag ttcagcatta
     1141 tgttgctata ttttatgata ttacgtatat taaagagaat gaaacaagat tagaaaaaat
     1201 agctcattat gatcctctta caaagcttcc aaatagattt ttattattag aaaaacttgc
     1261 tatagctatg aataacgtta aagagaacgg caaaaaaata gctgttatat atctggattt
     1321 agacggattt aaaaaagcaa atgatactta tgggcataat tgcggagatg ggcttttagt
     1381 agctatatct agtcgtatgc aaggtattat atcaaatggc gataatttga tagcgcgttt
     1441 cggaggagat gagtttgtag ctctcattaa tgatgtaagc gatgagaatg ctcttattaa
     1501 gatcttagac gatatgcttt tagccgctcg tgataaaacg gttatcaata gcaacaaaat
     1561 tcaagtaagc acaagcatag gcgtagcatt ttatgataga catagtgata tatctatgga
     1621 agatctatta aaaagagcag attgggcgat gtatcatgct aagttatctg gtaaaaatag
     1681 atattatata tttgatgaaa atagagatga aatttttaac cagtataatg agagtttatt
     1741 atctaaagat aaatttgatt ccgatgagtt tttcttgatg taccaaccag tagtcaatat
     1801 aaaagatgcg aaaatcacaa gttttgaagt tcttcttaga tggaaacatc cgcaaaaagg
     1861 tataatgctt cctgtggatt tcttgcatat atttagcgat aaagtctggt ttgatgaact
     1921 tactatatgg attattataa atgctcttag agattctgaa gatattttta ataaagggat
     1981 aaaattaagt atcaatatac cgtttgaaca gctaaacgac gagatctttt ttgctaaatt
     2041 taaagatctt tataaaaata gcgatttaag atttgatatg cttgaaatag agataacaga
     2101 cgctatgtcg gtaaaagata ttgaaaacga gatattaaat ttagtaatat atgaagatct
     2161 aggtataaag tttgtatttg atgattttgg gtcaagctta tcacttgcta acactatgaa
     2221 aactgctcct acaaatacat ataaaataaa taaaaaatat gctcttgagc tgcttgatag
     2281 agcagataat gtagatatgt tgcagactat attaaatata tgtagcgcgt ttaaaaaacg
     2341 tgctataatt aaaggtgtag aaaatgagta tatctacaac atagttgcaa atataggctt
     2401 tgtagagcta caaggcaatt ttataagcaa accgatattt aaagatgata tatcagatat
     2461 gataaataca atttatatta aacgagtttt taatccaaat ttagaaaaga taccgcttta
     2521 taaatttatc atatatcaaa taaatgctat taagcagatt ataatatcta tagaaaatta
     2581 taacacttct atatttgatt actctactta tagaaaagta tatgacgagt ttgataggct
     2641 aaaagaagta ccggaatcct gcaaagaagc agataaactt ataactttgg tatttagtag
     2701 taattttata aacaaagagg agatagcgta tttgctaaat gagttagaac ataaaaaatt
     2761 aaatatttta aacaccataa tcggagaata aatttgaatt atacaaataa gattatttat
     2821 gaacatgaaa ttccagacgg ctcaaagttg tattttggaa atagtgctaa attaaaaaga
     2881 gatatagaaa acagggctag tgtgatttta gaaaagtatg gatttagcga gattataact
     2941 ccgtatttta gttatcatca gcatttaagc gtagcacctc aaaagctatt aagattttca
     3001 gatagtacaa atcacgagat aagtttaagg gccgatagca cggtagatgt agtaagaata
     3061 gctacaaaaa gacttaaaga tatgagtacg aaaaaatggt tttatatcca gcctgttttt
     3121 aagtatccta gtagtgaaat ttatcaaatc ggagccgaaa ttttagattc taatgattta
     3181 ttaaaatgta taaatatagc cgcagaacta tttgacgagc ttcacataaa gcctcattta
     3241 caaatcagca atatagaaat tccaaaaata atatgcaaac ttctggattt gccaattagc
     3301 gtatttgaaa acggaagact tgagttgatt ttgaatcaaa atttaaactg gttaaataga
     3361 ttagcaaata taaaaaacga taaagatatc gatgaggtta taaaaatagt tccatctgag
     3421 ctaagagagc ctttaaattc gataaaagat ttggctagcg gatatgaaaa tagagtgtat
     3481 gcaccgctct attattctaa aatgagatat tatgataagc tattttttag gtttttatgc
     3541 gataattata ttttaagtgg cggcggcagc tatgagatag atggcaaagt ttctgttggt
     3601 tttgctattt ttagtgacgc tttgatagaa aatttaagta aataaaggac tttttatgac
     3661 aaaggcggat ttgattgttg gaatacaatg gggagatgaa ggcaagggca aaatagtaga
     3721 tatgctttca caaaattatg acgtagtatg tagaagcggt ggaggacata atgcaggaca
     3781 tactatatgg gttgatggta tgagatacgc tttacactta gttccaagcg gaattttaca
     3841 taaaaatatt ataaatatta taggaaacgg tgtcgttgta aatcctgaag ttttgattag
     3901 cgagatggct cagtttgatc atttagaagg tagatttttt ataagcgata gagcacatct
     3961 aaacctagct catcactcat taatagatca agccaaagag agactaaaag gcgataaagc
     4021 tataggtact actggtaaag gtataggacc tgcatattca gacaaaatca gcagaagcgg
     4081 acatagagta ggtgagcttt tagatccaaa agcactttgt gagagtctta tgaaagattt
     4141 tgaatcaaat aaaccgtatt ttgacgctct tagtatagaa atacctccta aagacaaaat
     4201 tttagctgat ttggttagat ttaaagatgt tttagctcct tttatcacaa atacaaccga
     4261 gcttttatgg agagctatgg atgataataa aaaagttttg cttgaaggag cgcaaggaac
     4321 tcttcttgat atagatcacg gaacatatcc atacgtgact agctcaaata ccgtatctgc
     4381 aggggcttgc accggtttgg gccttagtcc aaaaagcata ggcaaagtta tcggtatcat
     4441 aaaggcatat tcaactagag tcggaaatgg tgctttccct accgaagatc ttggcagtga
     4501 tggtgaaaat ctatgcgaga taggtaaaga gtttggtact acaacaggta gaaaaagacg
     4561 ttgcggctgg cttgatgttg tcggtataaa atactcttca aggctaaatg gagtagatac
     4621 ttacgctttg atgaagcttg atgttttaga tggatttaaa aatgttaaaa tttgtaaagc
     4681 atatgagtat aaaggcgaag ttatagatta ttttccttca gatctccaaa atgcaactcc
     4741 tatttatgag gaattagaag gttgggatag tataaatggc atcaaaaaat atgaggattt
     4801 acctttgaat gctagaaagt atatagagag aatagaagaa ttaaccggtg taaaaatcgg
     4861 atttatatca acaagtccag agagaaatga tactatcgta agatgaataa caaatttacg
     4921 caagtagtaa aagtaaaaga agaaaacgtt aataaaatag agctaagcct tgctaaatgc
     4981 agggctttag acaaagagct aaaaaagtct atgggcgcca ttatagatga gttaaatttg
     5041 catagattcc cacgtggcgg tagttctgcg gatataaaga taaatctaga agagcagaag
     5101 cttttgagag aacaaaaaga gagaataaaa gagaaaataa tcttaaatca aaaagagatc
     5161 gttcattacg aatttcaaca taaaaaagca tatatagagt tagaaaagat gaaatattta
     5221 gaaaaagaag aaaccgcaaa agagatagct aagataaaaa aacaagaagc aaaagatctt
     5281 gatgaaattg ccgttcaaag atactctttt atgaaagacg caaaatgaaa tttgccttag
     5341 ttttctgttt tttatttgta agtttaaatt tgatagccgc agatgactgg gatgctatat
     5401 atgaagctaa aaaagctgag ataacacgcg agtttgaacg catagacagt gcaagacaag
     5461 agttagaagc ttacagagcc gctacaaaat ccttgtttga taaaagagag gctgaaattt
     5521 caaaaaaaga gcttgatgta aatagaacgc tagatgaaat ttcaaaaaaa gaggaaaata
     5581 taaaaaatat gcttgcaaaa aatgaaaaaa ttttagaaga gttgaaaaca atgacttccg
     5641 ataaagtttt agaagtatat gcaaaaatga aagattctcc tgctgcaaat attataagct
     5701 cacttcctag agacgaagca gctaaaatac tttatgcgct tgagccaaaa aaaatatcgt
     5761 ctatactctc aaaaatggat ccggcgacag cggcggaact taccgaaatt ctaaaaaaag
     5821 acgatctatt tacggacaat aatagttctg ttaaatgaac tttaactttt aaatttataa
     5881 aaaaatatac aaaaattcat atagctttga gtaatgtcac atacctttaa ctaactttta
     5941 cgttttttta gataaaattg ttacaaaata atgaaaggct gtttatgcga atcaaattac
     6001 cacacgcacc ttatatagca agaaaagttg gattagacct ttttaattgt ggttttgtta
     6061 gttttaaaag cggcatcgag ccagttgcca gcgtagtaca aagcatattg gaaaatgata
     6121 ttaataaaga aagagcactt gaagataaag taaaagaggt gctagatcaa aatgaaaacg
     6181 agatggattt tatgcaagtt gatagaaaaa atatgttttg gcttataaag aaaaaacttg
     6241 caaaggattt tggcgtaatt ttatcttacg aggatagata tagtagcgtt tctcatgaaa
     6301 ttttagagct tttatggaaa aaagatctca tagactatag cgtatctgat aaccgtgtta
     6361 aaaacataat ttatggcgca atagaaaatt atttaaaatc atatgaagat atagaagata
     6421 ttgtagtaga taggcttgca aattacaaaa gaaagcttat tgctggtacc gatgagtatg
     6481 atttgatatt tgaaaagctt tatgaagaag agctacacaa aaaaggaatg atataatgaa
     6541 agcttatgtt tatatagaaa atggagttta tttagaagca aaagcgttcg gaaaaggcgg
     6601 aagtgctttt ggcgagcttg tatttaatac ctctttaaca ggttatgaag agataataac
     6661 cgatcctagc tacgccggac aatttataat ttttactatg ccagaaatag gtatagtggg
     6721 agtaaatgaa aatgatgaag agagtgcaaa aatccacgct agcggagttt ttatgcgtaa
     6781 ttttaatcaa accccaagta attttagaag tgaaaaaagc ttagagaaat ttttttatga
     6841 tcaaggtaaa tttggaattt atgatttaga tacaagatat cttacaaaaa tgttaagaga
     6901 cagtggaaat ttaagagctt ttgtatcgac tgagataagc gataaagaga ttttaaaaca
     6961 tgaattagaa aatagtgcgc gtatagacga gataaactat gttagtatag taagtactaa
     7021 aaagccatat attcactcta aaaactcatg gaaacatcaa aaacaaagct atggaaattt
     7081 gagttctatc ggtaaaaaag ttgcggtcat agattatggt gtaaaaagaa atattttaaa
     7141 tgaattgtgt gaagcgggac ttgaggtaga agtttatccg cataatgtta aagctgattt
     7201 tttgatagac aaatttaaaa aaggcgagat aaatggagta tttctaagca atggtccagg
     7261 cgagccaaaa atgcttgtaa atgagatagg cgagataaaa aaacttatag ccgcagatct
     7321 tcctattttc ggaatttgtc ttggacatca attactttca aatgcttatg ggtatgagac
     7381 ttataagctt aaattcggac aacacggcgc aaatcatccg gttttaaatt tagaaacaaa
     7441 aagtatagag ataactgctc aaaatcataa ttataatgtt cctgaaacca taagtgaagt
     7501 agcaactgtt actcatagaa atctttttga caacactata gaaggtgtta gatataacgg
     7561 cggtaaagta ttttcggtgc aacaccatcc agaagccagt agtggtccta acgagagcaa
     7621 atatatattt aaaaacttta ttgaaatact ataatggata taagtacggt atttagcatt
     7681 atcagcattg ctcttatgtt tagtatatcg cactgtatag gaatgtgcgg cggatttgta
     7741 atggcatata atgctaaatt atcaaataaa accagaaaag agatagtttt tcttagtatc
     7801 agttatcatt taagtagagt ttttgcttat gtttgcttgg ggattttttt tggttttttt
     7861 ggttctatcg tgatattaaa tttaaaaacc aaaggatttg tgttttttat cgtcggtgtt
     7921 tttctagtta ttttatctat agctttgata aagcgcggaa atctgttagc ttttatagaa
     7981 aatgataaaa taggaaattt aataatgcgt ttttttaaaa agtttagcaa aagaaatgac
     8041 gctctgtctt tcatgatatt aggtttttta aatggtttat tgccttgcgg ggttgtttat
     8101 tattttttgg cgttatctct tagtagcgga agtattttta acggttttct tgtgatgttt
     8161 atatttggtc ttagtactct acctgttatg ttgattttta gcggtacggt tggtcttgta
     8221 agtgctaaat tcaaacacac aatgacaata gctacttctg ttatcatagc gatttatggt
     8281 gtatatttat catatttagg atttatggct ataaaatgat tgatttaagt gaaagattaa
     8341 aacagtatca agctgctatc gatacaagta atatcgtttc taaaacagat attgagggtt
     8401 acattacttt tgtaaatgac gaattctgta aaatcagcgg ctatacaagg gaagagctta
     8461 tcggaaaacc tcatagtata gtccgccatc cagatgttcc aagcgaaaat tttaaaattc
     8521 tttgggaaac gatcttagca aaaaaagtcc atagagccat agtaaaaaat aaagctaaag
     8581 acggcagcgc attttatcta aatacaacta ttattcctat actagatgag aaaggaaata
     8641 tagaagagtt tgttgctata cgtcataacg taactgaggt cgttctcctc aatgagagac
     8701 ttttaaaaac acaaaacgaa ttgacggatt taaactcgtt actagagcaa aaagtagcag
     8761 aacagaccaa aaaactcata gatctaaata aaaatctcga acaaagagtt cttcaagaag
     8821 tagcaaaaaa tgaggaaaaa accaagctta tgtttcagca aagccgactt gcaaatatgg
     8881 gtgaaatgct agcaaatata gctcatcagt ggagacaacc gttaaatgag ttgagtatag
     8941 atttatttag attaaagcaa gccgtaaata ctcctaatag cgaattttta gatatatatg
     9001 atcactcaaa aacagttata aaaggtatga gtaacactat agaagatttt cgtaattttt
     9061 ttaattctaa tactaaaaaa gagagttttt tagtttctag cgcagtagaa gacgctgcca
     9121 taatgcttca aagaacgctt gaaaaagatg gtataaaact tgattttagc tatgataaga
     9181 atattttttt aaccggatat aaaaatgaac ttgctcaagt ttttgtaaat ctttttacaa
     9241 atgctagaga tgcttttaga gagataaata tagataataa attgataaaa gtttcagtaa
     9301 aacagagcaa aggctttgtg atattaaaaa tacaagataa tgctggaggt ataaaagaag
     9361 atattaaaga taaaattttt gagccgtact ttactacaaa gcatcctata gtaggaactg
     9421 ggcttgggct ttatatgaac aaaaagatta tagaaaaatt taatggcgat ataagtgtgc
     9481 ataacgttaa atttggaact tgttttgaga taaaaatacc gactttagta gaaaaaggag
     9541 ataatgatga gtgatatatt aaagagtctt acggttctat ttgtagaaga cgaagacaag
     9601 ataagaacta gtatgggcag tgctatggag ggaatttttg caaaagtcat cctagctggc
     9661 aacggagatg aaggacttaa gaaattcaaa aaatttaatc cagatgttat agtaaccgat
     9721 atttctatgc ctataatgga cggtcttgat atgtcaaaag agattagaga tatatcaaaa
     9781 gatactccta tagtgatttt aagtgcattt agtgaaaaag aaaaactact aaaagctata
     9841 gaaatcggca tagataaata cataataaaa cctatagata tggaagagtt gtttgaagct
     9901 atatcagttt tggctcaaga taagatcagc actacaaata tagtagaaat aggcggtggt
     9961 tattcattta ataagacaaa aagagtttta gtaagaaatc aagaagagat agctcttaca
    10021 aaaaaagagt tggcatttat ctctatttta gtaaaaagat tgggtacatt agtgcttcat
    10081 gaggagataa aaaatagtgt ttgggttgga gaaaaggtga gtgacgctgc gattagaacg
    10141 tttataaaac gtatccgtga taaagtagga gcaaatttaa taaaaaatat tccgggactc
    10201 ggatataaaa tagaaacaaa tttgtaaaaa atttataagg taaaagtgcg cttttaaggg
    10261 taattataga gttataattt atacaaaatt aatcttttta agaaaattta tattttattt
    10321 accttataat tgcaaagtta tgtttttttc aggataacat aaaaaaatga caggaggaac
    10381 tttttgatgc agccaagtaa tgcattaaat tatgactata cagtcgctaa gtacttcatg
    10441 tttaccacta ttatatttgg tatagtaggt atgggtatag gaactttgat agcttttcaa
    10501 atggcatacc cagatctaaa ctacctagct ggtgaatacg gaacatttag ccgtttaaga
    10561 ccgcttcata caaatggcgt ggtctatgga ttcatgttgt caggtatatt tgctacctgg
    10621 tattatatcg gtcaaagagt gctaaaagtc tcaatgaacg agtcgaaatt cctaatgttt
    10681 ataggaaaat tgcatttttg gttatatgtt atagtaatcg ctttagcagt agttagtcta
    10741 tttgccggat tatctacttc aaaagagtat gccgagctag aatggcctat agatatacta
    10801 gttgttatag tgtgggtatt atggggggtt tcgatatttg gacttatcgg aattcgtcgt
    10861 gaaaaaactc tttacatctc tctttggtat tatatagcta cctttttagg tgttgctatg
    10921 ctttatctat ttaataacat ggaggttcct actcgtctag tttctggcat gggtagttgg
    10981 cttcattcgg tatctatgta tgcaggaagt aacgatgctt tagtacaatg gtggtgggga
    11041 cacaacgccg ttgcgttcgt atttaccgta gctataatag ctcaaattta ttacttttta
    11101 ccaaaagaga gtggacagcc gatattcagt tataagcttt cattattttc attttggggt
    11161 ttaatgtttg tttatctttg ggccggcggt caccacctta tttattctac agttccagat
    11221 tggatgcaaa ctatgggatc gatattctca gtagttttga tacttcctag ttggggttct
    11281 gctataaata tgcttcttac tatgaagggc gagtggggac aattaagaga gaatcctcta
    11341 attaaattta tggttctagc gagtacattc tatatgttct ctactcttga aggacctata
    11401 ctttctataa aatctgtaaa tgctctagct cactttactg actggatacc tggacacgtc
    11461 catgatggaa ctcttggttg ggtcggattt atgactatgg cggcacttta tcatatgact
    11521 ccgcgtgtgt ttaaaagaga gctttatagc aaatctttaa tggaagcaca attttggatt
    11581 caaacaacag gtatagttct atattttgcc tcaatgtgga tcgcaggtat cactcaaggc
    11641 atgatgtgga gagctactga tgagtacggt aatcttgcgt attcatttat agataccgtt
    11701 acggttctaa tcccatatta ctggataaga gctataggcg gattgctata cttaataggc
    11761 ttctttatgt ttagttataa cataatcaaa tcaatttcat caagcaaacc agttgagcgt
    11821 gaaccagtta gtgcttcacc tatggctgcg taaggaggaa tgaatgttta gttggttaga
    11881 aaaaaatcca ttcttttttg cggtatttgt atttatattt atagcttacg ctggtattat
    11941 agagatattg ccagattttg ctgatcgtgc tagacctgta gaaggtagaa aaccttatac
    12001 cgttttacaa ttagcaggtc gtcatatata tataaaagat agttgtaacg catgtcactc
    12061 gcagttaatt agaccattca aatcagaaac agatagatac ggaatgtact caatcagtgg
    12121 cgaatacgct tatgatagac cgtttctttg gggttctaaa agaacaggtc ctgatctatg
    12181 gcgtataggt aactatagaa gtacagattg gcatgaaaac catatgaaag atccaacaag
    12241 cgtagtgccg ggatctatta tgccggcata taaacatatg tttaataaaa atgctgatat
    12301 agagactgct tatgctgagg catttactat caaaaaagta tttaacgtac catatgatgc
    12361 tgaagatatg ccaaaacttg gcacttggga agcaactcaa gctatggtaa aagaagaagc
    12421 ggcggctata gttggacaaa tgaaagatca agatgttaaa gatgcatttg caagaggcga
    12481 aattcgcgaa attgtagcac ttatagcata cttgaatagc ttaaaataag gtttatgtta
    12541 tgagtgtaga aactataaga gagcttcaag catatggcta ttttgtctta ttggtcgcta
    12601 tggttgtatt actttatggc tattggtttc atctgaaaaa atctgaaaag tcaggtagaa
    12661 gagattatga aaagtattcg aatttagctc ttaaagatga gttacgtgat gatatcttag
    12721 aaaatgtttc tactaataac aataatgcta agaggagcgt tgaaaaatga aatggtttaa
    12781 tcttgaagat agtgtaaatt cgctttctat tcttggcgct atagctatca ttttattgac
    12841 acttattgtc gttggtaggc tatttaagct gatgaaagaa aaaaaagaag gcggcgagct
    12901 tagtgaagat aattgggatg gaataggcga atataaaaat ccactaccga ttggctgggc
    12961 tattgtattt gttcttacta tagtttgggc aatatggtat tttttattag gttatccttt
    13021 aaattcatac tctcaaatcg gggagtacaa tgaagaagtg aaagcttata ataagagttt
    13081 tcaagctaaa tttgaaggtg ctagcgctga ggagctaaaa gctataggag aacaagtttt
    13141 tttagtgcaa tgttctagct gtcatggtat cacaggtgat ggtataaacg gcaaagctgc
    13201 agatttaaat atatggggaa gcgaaaaagc tatttatgat gttgtcgtaa atggctcaaa
    13261 agggcttgac tatcctctag gagagatgcc aggcggtatg gtagatgaac ctactgctaa
    13321 ggctgtagca gcttttgttg ctaaagagat ttcagctata aaatctactt ataatgaaaa
    13381 tttagtagca gccggacgag aagcatggcc tacttgtgca gcttgccatg gagatgatgg
    13441 taagggtatg gacggacaag ctccagatct tactaaatat ggttcgggat catttgtcgt
    13501 agatgttctt aatcgcggta aaataggaaa tataggacat atgccaaaat tcaccggctc
    13561 aggaatactt aatgagactc aagaaaaagc tgtcggcgaa tatgtaattt cgctttcgaa
    13621 aggggagtag catggaaaat acaaatagat ccgtttttgg aataagcgga gtatctggaa
    13681 tgctgatcgc tactgtgctt ttgctaacta ttttagtggt tttaacatat cttggtattt
    13741 tatcacaaca aaatgttatg caaaaaccgt ataagttagt cgatcctgca tctgtacaga
    13801 tgaaaagcag tactaagcaa gcctcagaag taatggttat aaaggagtaa aaatgtcaaa
    13861 tgtattagaa tcattgatag ttgttggtct tataatcaca gcggctataa ctgcttggtc
    13921 ggttttaact ccaaatagcc tatttttagg atgaagttaa taactttgtt aaagagcggt
    13981 tttttagccg ctctttgtag ctttggtctt aatgctgcta ccatagataa tgctggagtt
    14041 ttaagcgagc ctataaaatc taaactaaat gagatgggcg cagagttaaa agagacaaca
    14101 ggtgtcactt tggatttgat tactttttca aatttgaacg ctgcaagtat cgatgaagct
    14161 attaagcctt ttaaaagtaa tttaaagcct ccatatgtta ttcttgtatt agttcctaaa
    14221 gaagccggag ctacaactgg caaagtagat atctacactt caaacgatgc caattcgctt
    14281 tttgataaag aagctgttct tagtccttat ccagaaagtg gatctatcct tccgatacta
    14341 gtttcaaata aaggcaaaga tatatacaac gcagctatgt taaatggcta cgccgatata
    14401 gcagatagga tagcagactc caaaggtgta gttttaaaaa gctccattgg aaactcaaat
    14461 agaaacacta ttaatatctt tagatattta atttatggtt cgattatact tgtcatagtc
    14521 gtatttgcaa taagaaaaat aaaaaggtaa tttatgcaaa atagaaaaac tttttggcca
    14581 tatgggattt tgctatctat atttgctata gtatgtgctt gtatttatac tgtctattat
    14641 tcactggatt atccggttca tttggataat ttctattttg ataaatacca aaatgtagaa
    14701 aacggataca acgagatcca gatcaagcag gctaaatttg atcaagattt taaatttaat
    14761 caaaatgcta ctatttatat agacggactt ctaaataaaa atgaacctca aaaactaagg
    14821 cgtaacaaaa tagttccggt agtagataaa aataaaaatg ttgagctagt ttttgataca
    14881 aatgctacaa atttaaaagc cgaacttctg ctttctagac cagatactaa tcaatttaat
    14941 aagagtttaa attttaagtt agaagataat aaatttagaa ttagtgatct aaatttaact
    15001 atgccaggca gatggcaagt tatgatgaaa ctagctgcga atgacgatag tgtaggattt
    15061 tttaaatttg aattatacgc caaataggat tttaaacgtc cttagctcat caagaaatgt
    15121 tcgtgagttt tacattgtaa attcacgctc aaactcttta gtctccaaag ctataactat
    15181 cgctcggttt gaacaacaaa ttgttatagt tccaaattta aaaaaagcta gtcaaataga
    15241 tagactttta ataatgcaaa aggctgcaaa aagcgtacaa aatatctcca gcgtgataaa
    15301 tgtaggatcg cagttttttg catttttaaa aaatagcgat tatttatttt ccttttttaa
    15361 agagttaaaa agggaatttg tgagcataaa agatcttgtt aggagcgata cgtatgcgaa
    15421 ttatgatgag catctaagca tacttgagga gcttttaaaa ctttatctta ttatgcttaa
    15481 agaagccgga ttttacgatg atatctctct tcctgacgag tatcaaataa attatgattt
    15541 tataaagaat tacgatgaga tcaaaataaa actagacggt atattttcaa aattagactg
    15601 gtatatactt tgcgagattt caaaatacgt aagtgttatt atagagttta gttcaagtaa
    15661 atttaatcaa aaaactatcg aaagcataag cgaaatttgt gaaactagtt ttgagatcgg
    15721 ctttgattat gttttaaatt tgagccgaaa aacagttatt tctaaggtga aaatagaaaa
    15781 aaatacagac ataaagctaa aaagtttttc tataagaagt ttgcagtgtg cttatgtttt
    15841 tgacgagatt tctaattttg tacgctgcgg aatagatcca aaaaagatag ccgtggtttt
    15901 accagatgag agtttttatg agattttaaa aaatgcagat gagcgtaata tgctaaatta
    15961 cgctatggga aaaagtttta cgactgagcc ggtatttgtt cttttaaata cactaaaatc
    16021 tgccttggat caagatttag tttatgaata cgatgaaagt tatctatcaa aaaatagtag
    16081 tcttgatagc ttgatttcgg ctttaaatta ttttaaattt gatacggatc tttattcaaa
    16141 tttgaataaa atatataatc aaagttgtga ttttgatagg tttaattccg ctatttctag
    16201 tattatttct aaatttacat tgagtattga agtaaaaact attttgttaa atgaagcgtt
    16261 tttaataggc gcgcttttac aaaatacatc tcttagattt ggaagtttat ttgagatatt
    16321 tttgatgaat ttaaaagaag caaaattaag tattgtaggt ggcgcagaag tcactgtaat
    16381 gggtgtttta gaaagtagaa gcggaaatta tgatggggta attattatag attttaatga
    16441 tgatattgtt ccaaaacgta gccaaaagga gatgttttta agctcatctg tgagaaaaaa
    16501 agcgggactc atcagccatc aagatagaga aaatttacag agattttatt atgaaagcct
    16561 cataaatcgt gcaaaaaaag taagcatatc atatcttagc gacgaagagt ctatattgtc
    16621 gcgttttgct agggattttt cttttagaat cgatgaaaaa tatactcaaa atgcgtatct
    16681 aaactcactt aaatcaggcg gaataaagct tagtttagaa aaaaaagata tctatttaag
    16741 acatgatttt ttcgctacgg agttatcatt tagccgcctt aatacttatc ttgcttgtaa
    16801 aagaaagtat tattaccgtt atattttggg cattaaggaa tatcgtggat ttgataaaga
    16861 tatttcaagt catttaggaa gtacaattca ctctgctttg caagaatatt tttctaaatt
    16921 taaaactaaa ttcgtgaaaa aagagttttt agagttattt aaaaagtatg aaaatacaat
    16981 agatacgcta gatagtgaaa ttttcaaagc cggattagcg aaatttgaag agagtcaaaa
    17041 tactcatttt aactccggat ttagcgtttt tgagtgtgaa aaagagctta aaaacgagtt
    17101 ttgcggtgtt aagatcaccg gtaaaataga cagaatagat aaaagtgcag atacttttat
    17161 gcttatagat tataaaagcg gaacagtgcc taaaaaatct tttcaactat cattttatga
    17221 agctttattc ggacacaata gtatatcatt ttactatgat ataaaaaatg agtataaatt
    17281 tataccaaat gatactaata cggatgagct agcacagtgt ataaacggtc ttaaagatga
    17341 gttcaaaaat gaagtttgtt ttgatagaaa tgaaaaagcg tgccaatact gtgcgtattt
    17401 tgttttttgc aaaaaggaac taaaatgagt ttttctcgtt atttggcttt agaggctagc
    17461 gcaggaagtg gaaaaacatt tgctttgtcc gttagattta tagctcttat tttgcaaggc
    17521 aacgatatag caaaaattct tgctctaaca tttacaaaaa aagcagcaaa tgagatgaaa
    17581 agtcgtatta tagatgcttt ttgcaatttg cacgaaagta gtaaaaaaaa cgaattaaac
    17641 gaacttgaaa agattttaga gcttagtgct gtagatattt tgagtttaag agataaatat
    17701 atgggtaatt ttttaaaaaa tgaacttaaa atttctacgt ttgattcgtt ttttacgatg
    17761 attttacggc agtttagttt aaatctcggt atcatgccag atttcaaagc gggaactagt
    17821 ttaaatggtt taacaaggtc tgaatttata aaaaatttaa aacaaaatca tcttttagaa
    17881 agctttgcat tttacataaa agagacaaat agcaataaaa atagagtatt cgaaacgcta
    17941 gagcttctgt atgaaaacat tagtttgcct agttttggtg agaattcaaa gattcctgat
    18001 gaatcttatg tttttgctaa atttagtgag ttaaaaagtt tagctttaga gatttcatcg
    18061 gataaaaatt tcttgaaaaa ttttgaagct aacaccgttt ctcagatcgc cggtaaaccg
    18121 cttattaaag agtttgattc aaaaaaatat tttgaaaaag ccgctttaaa tgcaaaattt
    18181 atgatgatta gggatgagct tatttcaaat ttaaaaaaat attatttgga gtatgagcag
    18241 tttaaaatca atgagctttt gaagtttatt tatctatata aatatagtag atttgaagcg
    18301 ataaaaaaag aaaatgcgct tgattttata gatgttacaa ggctggttta cgagttatta
    18361 ggcaatatag atagtgatat gctatatttt agacttgatg atagaataaa acatatactt
    18421 atagatgaat tccaagatac aaatataatt cagtatgata tacttttacc ccttattgaa
    18481 gagactctta gcggaagtgg gcaaaatgat ataggaagct ttttttatgt cggagatatt
    18541 aaacagagta tttataggtt tagaggaggc aggaaagagc tattttctag actaagaaac
    18601 agctataaac aaatagagac tttaagtctt gagagtaact atagaagcgc taaaaatata
    18661 gtaaattttg taaatcaaac atttagtaat aaaataaaat attataaaac tcaattatcg
    18721 tgcttagaaa atgaaggtta cgtcgaagtt tgtgagtttg ttagcgatga gttttatgat
    18781 actctttttc aaaagataga attttttgtc aaaaacggtg ttagatatga cgatatagct
    18841 atactttgct ggaaaaatag cgatatcata aatatcaaag ataagttaga aaagtccggc
    18901 gtaccggtgg ctactggagg ctcaaattta cttataaact cagctaatgt tagagtcgtt
    18961 ttgaatttta ttaaatactg tttattcggt gatgagatat atatttatag tgttcacgag
    19021 tttatagggg agaaaaaatc caagctgagc ttaaatgcca cagcagagct tgctagtacg
    19081 cttaaatttg tagcaagtta tctgaattta gagtgttttg ataagaattt acttaaactt
    19141 tatgagatta gcttgggata tgcagatata tttgatttta tatttaatat acaaaacgat
    19201 caaactccaa gtgccgacac tagccattgc ggtattactt tgcttactgt gcataagagt
    19261 aaagggcttg agttcgatca cgttatagta gccgatagac ttagtagagc cggctcaaac
    19321 atagacgtat ttataaccga atacaataat tcagagcaaa aatgggatat aaagctaaat
    19381 gatagtgcac tccaaaatct cggagatagc gagtttataa atttaaaaca gaagtgcaaa
    19441 gatcttgatt atgaagagga tatcaacaaa ctttatgtag cgttaacaag agctaaaaat
    19501 agtttgattg ttatgtcgaa gttggattca aacggcttaa aaccgtcata ttttaaagca
    19561 tttaccagct ccaaagagca aatttgttac cttgatctaa agccatttag cgtcggcaag
    19621 atcgagccta gtaaaacaag tatgagtttt tatggaggac ttgagcgcct agaagagttt
    19681 gaaactataa aaaaacaagc tgttagcgat aaacaaaatg atgaatatga gctgaattta
    19741 gaatctatat actttggaga agcgctgcat tactgtcttg aaatgatttt tgattttgaa
    19801 gaagaaaatt taaaaaacgc aaaaacagct ctgataaatc aatttggagc cattttatcc
    19861 aaaaatagta tagaagatat tataaatagg gttctaaatt tgataaatag cgttgagttt
    19921 aaaaatataa taaaagataa aaatatttta aaagagcaag atatcgcatt taaccaagtt
    19981 atcaaaagac ttgatctgct ttgcatagga gatgatgaaa tagtagtaat ggactataaa
    20041 agttcaaaga aattcataac tcaaaatgaa gatcaagtta gagaatatat gagcatctta
    20101 tctcaaattt atcctcaaaa aagagttgtc gggaaaatta tttatcttct aaacgataaa
    20161 gtagagtttt taaacgtaga tttaatctaa aattattctt aaattcagta aaatttaagt
    20221 aaatcttgat ataattccaa ctctaattaa agaataaaag gcaagattat gacaaatata
    20281 actaagccaa gcgaagttaa acgcgattgg atcgttcttg atgctgctgg aaagagattt
    20341 ggtagattac taacagaagc tgcaacttac ctccgtggca aacataaacc gggatttacg
    20401 ccaaacgttg attgcggtga ttatgtgatt atcatcaatg caagtaaagc cgagttcacg
    20461 ggtgcaaaca aagctgaagc taaactgtat cacaggcatt cgggctattt cggcagtgtt
    20521 aaaagtgaaa aattcggtga tttattagta aataaaccag aaaaacttta taaattagcg
    20581 gttcgcggta tgcttccaaa gacaaaactc ggaaaagaaa tgcttaaaaa acttaaagtt
    20641 tatgcgggca atgaacaccc acatactgca caaatagcta aagaaggaaa ataacaatgg
    20701 caacaacata cgcaacaggt aaaagaaaaa cagcagttgc taaagtttgg gtaaaaccag
    20761 gtagtggcaa aatcataata aatggtatgg atctaaatac ttggcttggc ggacacgaag
    20821 ctattaagct aaaagttgtt caacctcttc ttgttactaa acaagagacg tctatagata
    20881 ttactgctac aactattggc ggaggttact ctgctcaagc agaagcttta agacacggaa
    20941 tttcaagagc tttagctgct attgatgctg attttagagc cgcacttaaa ccacaaggtc
    21001 ttcttactag agatagtcgt gttgttgagc gtaaaaaatg cggacgtaga aaagcaagac
    21061 gtagtccaca attctcaaaa agataatttt tatttcgcaa tattctcaaa tttggaagct
    21121 tttttggctt ccaaaccatc ttttcaaatt tattcatata tttagcaata gtttataata
    21181 aattataatt aagttaaaaa gaactaagta taattctttt gtccaacaga taaaacctcc
    21241 tttttgtaat aatttataga gtcgcttgtc tggcggctct actcccgctt atatttcaaa
    21301 taatttttta aatttttaaa aataaaatct attttttatg aaattcgtgc taaaatatca
    21361 aaaaaatttt aagaaggaaa tgaaaatgaa aaagattgct ttagctatat gtgtcgcgtc
    21421 agctcttttt ggtgccaacg cttataacta tgaatttact ccagttgttg ggtatgctca
    21481 tccagaaggt actcagggca tagacgatca aaattttgta ggtcttagaa tcgcaagaaa
    21541 ccttgatgag tttttactaa gtcaaattga gcttggtttt gattattcaa aaaatgttag
    21601 ttttgagcat aaaaatggtg tgcccgtagg ctttgaaact gatgttacaa gatattattt
    21661 aaatttagta aaagattttg ctattaccga tactatctct gtttatggac taattggtgt
    21721 tggttatcaa gattttacta gagaagccaa tgatgtagaa gatggtggat ttgctcaagc
    21781 tggtttgggc ctaaaataca aaattacaga taattttgct ttaaaagcag aggccagaga
    21841 tgcacttgat tggaataatg gatcaaatac gtttttatac actttaggtt ttgcagttgg
    21901 atttggcgag tctagatcgg cagctccggc tcctgttttg gtagaagagc aaccagctcc
    21961 agcgcctact aaaatagttc ctgccatagg tgatgaagac ggcgatggcg ttttagataa
    22021 cgtagataga tgtcctggaa ctccaaaagg agttgttgta gatgaatatg gatgtgagaa
    22081 agtgatccgt ttaagtttaa aagcaaattt tgcattcgat agtgcaaaag ttactcctga
    22141 atatgaagca aaaattaaag aagttgcaga tgttatggta gcaaatccag aatatagagt
    22201 gattttagaa ggtcacacag atagcactgg acctgaagat tataataaaa aactatctgt
    22261 caaaagagca gatgcagtag cggcaacttt agaaaaaatg ggtgttagta aaaataaaat
    22321 tacaacagtt ggatttggcg aagaacaacc tatagcgtca aacgctacaa aagaaggacg
    22381 tgctgaaaat cgccgcgttg aagctaaatt tagaaataaa tagtttctat ggattttata
    22441 caaaacattg actatatgag cgtacttgca cttagtagta agtacgctat taaatttata
    22501 gtatccattc ttatcttttt tatcggcaag tggatcatat ccaaacttgc cattgttctt
    22561 gaaaaaataa tcaaacgaac aaaaatagac cctatgcttg gtaattttgt aataaatagt
    22621 gctagaacta tgttgtttat atttgttatc ttagcggctc tttcaaattt aggcatagaa
    22681 actacgtctt ttgtggctgt tttgggtgct gtgggtttgg ctataggtat ggcgtttaaa
    22741 gatacatttg gaaatgtagg agcaggagtt cttattatct tttttaagcc gttcaaatta
    22801 ggcgacaaca tcgaaatagg cggttcggtt ggagttgcta gtgatctaaa tttatttagc
    22861 acatgcctta gaaccggaga taataagata ataattatcc caaactcgca agttatatct
    22921 tcgcgcatta taaattattc tttgagtcct actaggagag ttgatcttgt ttttgggata
    22981 gattataaag acgatttaaa gttggcaaga gatattattt tagatatagc agaaaagaaa
    23041 gatactattt taaaagatcc ggcaccattt gtcggcgtac ttagtttagg cgataatagt
    23101 gtaaatttaa ctgcaaagtt ttggacaaac aatgagaatt actggagcgt ttatcatcag
    23161 atgttagaag aagttaagct tgcatttgat gaaaatggca tttctatacc ttttcctcag
    23221 gttgttacgc atcacgttta tgaaaaacaa taggatataa tttgccaaaa accactatat
    23281 tgtttgattt agacggtact ttgatagact ctacaagttc tattttaaat ggattccact
    23341 ctgcgttttc taaatttgga tttgctcagc caaatgatga gcaaatttgc tctttaattg
    23401 gtcatcctct tgattatatg ttttgctctc ttggagttcc aaatagcctt gttttgaatt
    23461 ttgtagatac ctataaagaa gcatatagaa aaacgtattt agagcaaaca aagcttttag
    23521 acggtgctaa agaagccgta gaattagcta gcaatatagc tgatatcggc gttgtaacta
    23581 ctaaaacttc aaaatactct atttgtttat tagagcatct tggtatagga aaatactttc
    23641 aaacagtagt aggcaaagat gatgttataa atccaaaacc tcatccagaa cctatattaa
    23701 aagctctttc aaatttaaat aaatcaaatc aaaatgctta tatgatagga gatacttcta
    23761 tggacgctat ggcagctaaa ggcgcaaata taattagtat aggagttagc tgcggatacg
    23821 agaagatcga taatttattt aaaatttgtg attgggtaga aaaaaatcca aaagaagcgg
    23881 tcgagcgcgt aaatatcatt tcaaatttat aatattattt aaagccattt ttatattaat
    23941 ttttatttca gtatttttat atataattac aataactcta acgataaata agtaagaatt
    24001 aaatttaaaa agcaatttaa attgtaatag gagccaaact ttaagttata tatatgtaga
    24061 attataaaat caagttacac gattgaaagg aaggtaacct aatggataaa gttatgaaga
    24121 caatggacgg taatgaggct gctgcatacg cggcttatgc tttcactgaa gtagcaggta
    24181 tttatcctat aacgcctagt tcccctatgg ctgattatac tgatatttgg gcttctcaag
    24241 gtaaaaaaaa tatttttggt atgcctgtta aagttgtgga gatgcaaagt gaagcaggag
    24301 ctgctggaac tgtgcatgga agcttgcaag tcggtgccct tactactact tatactgctg
    24361 ctcaaggttt attattaaaa attccaaata tgtataaaat agcaggacag atgcttccgg
    24421 gcgttattca tgtggctgca cgttctatag ctgctcaggc tctttctata tttggcgatc
    24481 atcaagatgt gtatgcctgt agacaaacag gttttgccat gcttgcaaca ggttcggttc
    24541 aagaggtgat ggatctagca ggagttgccc acttggctgc tattaaaggt cgcgtaccgt
    24601 ttttacattt ctttgatgga tttagaacaa gccatgaaat tcagaaagtt gaagttattg
    24661 attactctgt ttttgataag ttagtagata aagaagctat tcaaaaattt cgcgacgaaa
    24721 gtatgaatcc agagagtcca aaaacaagag gaactgctca aaatgatgat atatactttc
    24781 aaacaagaga gttggtaaat aaattttatg atgatcttcc agatgtggta gctcactata
    24841 tggatgaaat ttcaaaagag acaaaacgag agtataaacc atttgtatat tatggagata
    24901 aaaagcctga tcgtgttgtt atagctatgg gttcggttac gcaaacttta gaagaagttg
    24961 ttgattattt aagaagcaaa ggcgagaaag taggtatagt aaaagtacat ctatatagac
    25021 cttttagttt gaaatatttc tttgatgtga ttccaaaatc tgttaaaaaa atagctgttt
    25081 tagatagaac aaaagagcca ggaagtcttg gagagccgct atatcttgat ataaaagcag
    25141 cgtattatgg aagtaaaaaa tccccaacta tagtcggagg tagatacgga cttagctcaa
    25201 aagacgtaga tcctgctcag atggtggcag tatttgaaaa tttaaaacaa gatgagccaa
    25261 aaaacaactt cacagtaggt ataaatgatg atgtaacaaa tttatcttta gaagttggag
    25321 ataaaatatc acttagcgac gatgactgta tagagtgctt attttatgga cttggcgcag
    25381 atggaactgt cggagcaaat aaaaactcaa tcaaaattat aggcgataaa accgatcttt
    25441 atgcacaagc ttactttgca tatgatagta aaaaatcagg cggctataca agaagtcact
    25501 taagattcgg taaaaaacct atccgctcaa cttatctagt atcaaatcct cattttgtag
    25561 cgtgctccgt tgctgcatat cttgatattt atgatgttgt agatggatta agagatggag
    25621 gaacgttttt acttaactca atctgggatg ccgatgaaac agtaaaaaga attccaaata
    25681 aagtaaaacg tttattagct cagaaaaaag caaatttcta tatacttaat gctacaaaat
    25741 tggcttatga tataggtctt ggtaatcgta caaatacaat tatgcaatcg gcgtttttta
    25801 aacttgcaaa tattatcgac tttaaagatg ctcaaaacta tatgaaagag tatgctaaaa
    25861 aaacatatgc taaaaaaggc gataagatag ttgagatgaa ctatgcagcc atagatcaag
    25921 gcgctgataa attagttgaa attaaagtag atccaaaatg ggcaaaatta aaagatgaag
    25981 ttataagtga aaataaatat ataggtgacg attttataga aaaagtagta aaacctatga
    26041 acgcagcacg cggagacgat cttcctgttt cggtattttt gggttatgaa gacggtggat
    26101 tcgaagctgg tacgacagaa tatgaaaagc gcggcgtagg tgttatggtt ccaaaatgga
    26161 tagaggaaaa ttgtatccag tgtaatcaat gcgcttttgt gtgtcctcac gcagttatta
    26221 gaccttttct tatagatgaa aaagagctaa gcgctgctcc taaaggtgta aaatctcatg
    26281 ttttagatgc aaaagggaaa gagataaaag agttcaagta taaaattcaa gtaagtcctc
    26341 ttgattgtac aggttgcgaa ctttgtgctc aaaactgccc tagcaaagag aaatctcttg
    26401 ttatggttcc acttggtgaa gagatggata aaggtgagca agaaaatgcc gattatctat
    26461 ttaaaaatgt aaaatataaa gatgacttga tgagtaaaga cagcgtgaaa ggagctacat
    26521 ttgctcagcc gttgtttgaa tttcacggtg catgccctgg atgtggagag actccttata
    26581 taactttggt cacaagatta ttcggagagc atatgatggt agcaaacgct actggatgca
    26641 gctcgattta cggaggttct gcaccatcta tgccttatcg taagtcaaat aaaaacggtc
    26701 atggcgtagc ttgggcaaat tcgctttttg aagataatgc tgagttcggt atgggcatgg
    26761 aagtagcaac tgaaactata cgccaccgca tagaaaatat tatgcgagat accatggata
    26821 aagtgccaaa tgcacttgca gctctttata aagattggat tgagtttaaa ggagatatca
    26881 caaaaacagc tcaaataaga gatatgttag tgccgcttct tgaagcgaat aaaaaagttg
    26941 atggagtaaa agatcttctt agcttgaaaa aatatatatc tcgcaaatct caatggataa
    27001 taggcggcga tggttgggct tatgatatag gatatggcgg acttgatcat gttttagcaa
    27061 gcggtgagaa tgtcaatgtt ttagttcttg atactgaagt ttattcaaac actggaggac
    27121 aaagctcaaa atctagccgt agtggttctg tcgcacaatt tacatctagc ggtaaagcgg
    27181 ttcaaaagaa agatttagga caaatcgcta tgacatacgg aaatattttc gtagcacaaa
    27241 tcaattcaaa cgcaagtcaa gcaaatgtag taaaagctat agctgcggca gaagcttata
    27301 atgggccaag ccttgttata gcgtattccc cttgtatagc tcacggtatt aaaggcggct
    27361 tatctttatc tggagatcaa gcagaacttg ctacaaaatg cggttattgg cctacattta
    27421 tctatgatcc gcgtttagta aaagaaggaa aaaatcctct taagatcacg tctaaagaac
    27481 cagagtggga tagatatgaa gagtttttac taaatgaagt tcgctataat tcgcttaaaa
    27541 agctaaatcc agaacatgca gctgaattat ttagtcaaaa taaagcagat tcgcaaagaa
    27601 gatatcgtca gttaagacgt cttgcaaatg ctgatttcag cgatgaatta gcataatatt
    27661 tagtagcttc cttatcttgg aagctactcc tttcaaattt aaaaaaatcc aaattttacc
    27721 gatatacaaa atgcttaagt taaactaatc tatgaaaaga gataaatatg gacaaagcat
    27781 ttatcataga agaaatttta gatgatagcg caacagacgc tacaactgcc gcttatagcg
    27841 gaaattttaa tgagtataaa atcaccgctt caaagcatat gcaagggttt tatatcattt
    27901 cagatattgt taaaaataga gatgagacaa atatttttga taattctata aaaatgtttg
    27961 ttttcaaaga ttgtgtgaaa agttttgatg agttgatttt aaatttagaa tcaaatccta
    28021 aaaacaaagt acgattttcc aatagtttga ctatagataa tggtaatatt tcagatatca
    28081 aagtctatat ttttggtttt gatgagacca aagatagctt tttatttgat ccaaataaat
    28141 ttccacgcaa tgctgtttat aagtatagga tctcaaaaga tgagtttcat gctcatatga
    28201 gtctgaattt agatcaaaga ttggctaaaa actttataga atcttttgct tttagtagcg
    28261 attatggatt tgaaaataag aaaatatctg ttataataaa tgaaatttat agatatgaga
    28321 tattataata ttttaaatat aaaaaggaga gaatatgcaa ataggtgatt ttaattccaa
    28381 tagtatgttc ggttttttaa acataaaacc ggattcaccg gaaaatatag agaaaattaa
    28441 agaaagtgct tcaaaaatag atgcaaaaaa tattacccaa aattattttt tacagtttca
    28501 gaataacact ttcagtaata cttcagggaa tataaatgtt caagttgggc ttatgtcatt
    28561 tagccttcca gagccattta tgccgggcaa tagcaataat tctagcgggc ttagcagcgg
    28621 tttaagtgat ttaatatcta aaaatatatc acaaacaggc tataccggaa aacctatatc
    28681 tagtttaagt caaggtgaag ctaaagcttt gatatcagaa aatgggtatt ttggagttac
    28741 aaatactgct gatagaatag caggttttgt tataagcggt gctggagata atcttgaaaa
    28801 gcttcaaagt ggattagaag gagttaaaag aggttttacc gaagccgaga aactatgggg
    28861 ctcaaaactt cctgatatat cgcaagaaac tatgtctaag gcaatttctc agataaatca
    28921 acgcatatcc gaattaggag gtaacacctt aaatgtcact gcgtaatatg cttgtaattt
    28981 cagttttaag tatgtttgct ttttctgggt gcggagttac ttccgcacca aaaccaaaac
    29041 caacgccaaa acctccggtc gcaaaagtaa ttccgaaata tataaaagga actattgcta
    29101 aaattgaaca agccgaagga ggttggaagt atgatatacg cggtattgaa acatcaaatt
    29161 caaagcttaa atttgcaagt gctatttcta gtgaaaacgg gtttaaagta ggtgatttgg
    29221 tgtatgctca gatagaaggc agcaagatta cctacataag tcttatcata caaaattatg
    29281 caaatcctga aaaatcaaaa caaattttaa aagtacataa aagagataaa agcaaacagt
    29341 ctaaaatcgc agctcctgtg gcggaaaaac taaatttctg atttatttat ataattaccg
    29401 agcatttact aaatttattt ataatttcag aagcaatccg aattttaact cctttctaaa
    29461 atttctaggt gagattagta acaaatctca cctaaaaata tattttggta gatattatca
    29521 ataaaatgta tgaaatttat ctttttttaa gcaaattaca attaaaatta cccataacac
    29581 attttagaag gagaaaaaat gaaattagtt aaaatgagct tagccgctat agtagctgcc
    29641 ggtgctctta caagtgttgc gtctgcaact ccacttgagg aagctataaa aaatgttgat
    29701 gtatctggtt ttgctagata tagatttgat agcacaaaag ttgatgcaaa tggtaatcaa
    29761 ggcagtgata caaaagctag ccatagattt acatcttacg tacatttcaa aactgcttta
    29821 gatgacaatt ttttcgctgt tttaggtctt agatatgata gcaaagatgt ttcaggtgat
    29881 catataacag gcggacaaac acaagttggt gttaatgacg caggtgctgg ggattttggt
    29941 caaactttca atgttagaca attcttatta ggatacaaag ccggtaatac aactatccaa
    30001 gctggtcgcc aagttcttgg aacattcttt actgatgata tggtaggaac aggtattaaa
    30061 gtacttaata cagatatcac aggtttaact cttgctgccg ttgcttttga tgatttacaa
    30121 aatgatccag atatcggaag tagaggtcta gtagtaaatg gctcacatac ttaccaaaat
    30181 aacctttatg gcgtagctgc tatcggttct tatgatccag ttagcttcca actatggtat
    30241 gctatgcttg aaaatgttac tgatctatac gctatagacg ttgcagtaaa tttcaatgca
    30301 actgctgatc tagctcttgg tttacatggt caatttggcg gctcaagcat agatagcgat
    30361 ttcaaaagag gtacaaacaa ctcagcagat gatgctaatt tatgggctat cgaagcaact
    30421 gccgaaggat ttggtataga ctttagcgct ggttatatag acttctcagc tgataaagat
    30481 aaagtttctg ttgtatctta tgaggatgct ggttcattta taaaaccagg cgaggatcta
    30541 ttagactata cattattcaa tggtgagaac aaatactggt tcattactgc aggatatact
    30601 ttcttagaga aatatagagt aggtgttgat tacatcgatg gtgaaaataa aacaaatatt
    30661 cttaaaacag acaaaacaga gttagtcggt agagttagct atgcatatag caaaaaactt
    30721 aattttaaag cttggtggtc acatataact gaagagccag acaatgctgg taaagataaa
    30781 actgatcact tcagatttga agctaaatac tcattctaat ttctatgacc cgacttgttc
    30841 gggtctttct taatatttaa atttaaactt atttttatta aaaagtaact cttttattat
    30901 agtatttgta caaattacat atagctttac tttattatat ttaactgatt tttaaattta
    30961 tatactaaaa tatagtacaa aatgtctcga aatttctcat ttggtaaata atcggtaact
    31021 attttttaaa aatttatcta ttcttaagtt aattacaact aaaattgcct tgacaacttt
    31081 ttagaaggag aaaaaatgaa attagttaaa atgagtttag ctgccgttgt agctacatgt
    31141 gctttatcta ccgttgcatc tgcaactcca cttgaggaag ctataaaaaa tgttgatgta
    31201 tctggttttg caatgtacag atttgatagt gctcaatctg atatgaatgg taaagataca
    31261 aaagcatacc atagatttaa atctgacttc aactttaaag ctgcactaga tgataacttc
    31321 tttggtgtag taggctttag atatgatagt agagatgttt caggtgatca tataacaggc
    31381 ggacaagcaa atgttggaca acaagatgta ggttttgata actatggtca aactttcaat
    31441 gttagacaat tcctattagg atacaaagcc ggtaatacaa ctatccaagc tggtcgccaa
    31501 gttcttggaa cattctttac tgatgatatg gtaggaacag gtattaaagt acttaataca
    31561 gatatcacag gtttaactct tgctgctatt gcttttgatg atttgcaact tgatacaaac
    31621 ataggaacta aaggtctagt agtaaatggc tcacatactt accaaaataa cctttatggc
    31681 gtagctgcta tcggttctta tgatccagtt agcttccaac tatggtatgc tatgcttgaa
    31741 aatgttactg atctatacgc tatagacgtt gcaataaatt ttgatgcaac tgctgattta
    31801 aatcttggat tgcacggaca attcgctggc tcaagcatag atagcgattt caaaaaaggc
    31861 acaaataatt tagctgatga cgctactttc tgggctatcg aagctatggc taaagcttat
    31921 ggtgtagatt tcagagctgg ttatgttgat ttatcagctg atgataaaaa agtttctgtt
    31981 gtgtcttttg aagatcaagg ttcattcata gaggctggtg aagatctatt tgatacttac
    32041 tcattctttt acggcgacaa ccactactgg tttggagctc ttggatatac ttttgataaa
    32101 ttcagagttg gtattgatta tgtaaatggt aaaattacta aagctacttc aaacggtaaa
    32161 gttaatgctt acgaagtagt tcctagagtt agctatgcat acagcaaaaa acttaaattc
    32221 caagctttct ggtctcatta ccaaatagat gagatagatg gcaaaaacga tttcaaaaac
    32281 gatcacttca gatttgaagc taaatacgta ttctaatctc tatgacccga cttgttcggg
    32341 tctattatcc ttaaatcttt ttaaatttaa atactctttt tatcaactat taaaaaaata
    32401 ttctgtataa ttaaataaat ttaatccata aggaatatta tgaattttct taaaaaaccg
    32461 ttacttttca tctgtctcgc atgttttatg tatgctgctg atctagctga tgatagtagc
    32521 tatgttatag aagctaaagg tgattttggc aaagagctta aggctcttgt ggaaaagtac
    32581 gcaaaagatg aaaacgtatc gataaatgtc tataaaaaat ctccacaaga taatagcggt
    32641 ggatttataa atataggagt agataaaaat agagcttaca atgctagtaa aggtgaagag
    32701 ctttataatg caaattgcaa gcattgccat ggagacaaag gaacaagtag ggctatggga
    32761 gtatctcagc gtttagccga catgagtgca gaagatattt ctgcatctat gtctggttat
    32821 aattcagatc ctacttttgg cggtaaatta aaatatatta tgcagcctat ggcaaaaaat
    32881 gtaaattttt ctcaagtcgg agatataata gcctatataa aaggaaatga cgcatttgcc
    32941 attgaagata atataaaaaa tagcaatata agtacaaagc ctactcaaca aggaagttat
    33001 cttgagtagc attatggtca attgaccata attcggttct gtatttcgaa ttgttacact
    33061 gctttaaatt ttttaaaaat ttatatctaa ttatctgtta tattaagata aatttatgta
    33121 ttatctaaaa ttatagcaaa acaaggagta tatatgaaga aaatttcact tgtagcatct
    33181 attgctttag tagctgctac ttcgttgatg gcaaaagaga ttaaaatagg cgttgttatg
    33241 cctatcacag gagctgttgc agcatatggt caaacagcgt gggcaggtat agagatggcg
    33301 aataaattag agccaacttt aaaaaacgga gatacgctaa agttaatttt ggtagataat
    33361 aaaggtgata aggtagaaac cacaacagct actacaagac tagtaagtga tgataaagtt
    33421 actggcttaa taggagccat ggtcactgga aatactcagc aagtgcttca aatagcagat
    33481 gagaaaaaag tacctatgat agctccagca gcaactgccg ataaactgct tgaccgcgca
    33541 aaatacggtg ctcgagttac ttttatggac tcttttcaag gtactagctt tgctacttac
    33601 gctgctaaaa gtttaggctt aaaaactgca gtggttgtag tagatcaatc gacttcttat
    33661 tcgatcggac ttgcaaaagc atttaaaaaa cagtatgaaa aagatggcgg aaaagtttta
    33721 aaagaactta agataagtag cggagataaa gatttcaaag ctatagtatc tcaaatagga
    33781 agtttaaatc caagtatagt gtatatgccg ttttaccatc ctgaggcagc tttggtagtg
    33841 cgccaagcaa gacaaatagg cttaaaaact caatttgcaa gcggcgatgg cgtatcaaat
    33901 gatacgttta tagagcttgc tggagatgct tcgaatggat acttttatac ggatgcgttt
    33961 gatagttcaa atcccccaac agataaaagc aaagagtttg tggctgctta tactaaagaa
    34021 aaaggcgatg gaaatgttcc tggatttact gctttaggtg ctgattcata ttttttgatg
    34081 gtggatgcca tgaatagatg cgagaatcca gaagatagag aatgtgttaa taaaaagatc
    34141 aaagagacca aaaattttga aggtgtttct ggtattataa acatagattc taaaggaaat
    34201 gctatccgtt cagtcgttat aaaagaggta aaggatggga gagctgtata taaagatacc
    34261 gtgaatcctt aattttcaca tattgtttct tgagttattt tagtggaaat tcatataata
    34321 agtttatgta ctagaagtaa gccttctagt atagattttt actttatagc tgctaaaata
    34381 atctcaagat acttctgtta ataatttagt ttaggtttct tttgtggcat ttataacgat
    34441 aaatttttta gtggtaaaag catatgaaat ttactttttt aattatcaaa tttggtattt
    34501 aaaaaagtaa attaaatttg aagttttaaa taaaagtagg aaaattatgg atagctcact
    34561 ttttctccaa cagatggtaa atggttttag tttaggctct atgtatgctc ttatagcgat
    34621 aggttatact atggtttatg gagttttaag acttataaat tttgctcatg gggatataat
    34681 gatggttgga gcgtatgccg ctcttttttc tatgactagt cttagccttc cttttggatt
    34741 tgcgcttttg tttgctataa cagttgctat tattttagga gtatttacag atagaatagc
    34801 ttataaaccg cttagaaaag ctcctagaat ctcacttctt atcacggcta tcggtattag
    34861 ttttttactg gaaaatgttt ttcaagtgat atttggcgga actcctcgat catttccggt
    34921 accgtcttat tttgaacaat tagttactat aggatctgtt aacttagcta tgactgctat
    34981 tttagtaccg attatcacac tttttttact ctctgtcgta ctttttatac tttatagaac
    35041 aaaatacgga atggcaatta gagctcttgc gtttgatata agcacggttc atcttatggg
    35101 aatcgatgca aatatgatta tatctatagt atttgctctt ggttcgtctt tggctgccat
    35161 aggcggtgta ttttgggctt taaattaccc tagtatagat ccgcttatgg gagttttgat
    35221 aggactaaag gcgtttgcgg ctgctgtgtt aggcggtata ggaagtgttg gaggagcagt
    35281 gctgggtgga tttatcatag gatttacaga ggtcgtagcg gttgctttat ttcctgattt
    35341 agctggattt aaagatgcgt ttgcgtttat atttttgata ttagttttac tttttaaacc
    35401 aactggaatt cttggatata attttgaaaa aagtaggttt taataatgtg tatttgtaaa
    35461 tttagatatg ttttatttgt agctttggca gtcggttttc tttttctaag caatagttat
    35521 tttagtgaat attccctaag aatagtaaat aatatcgcta tttttataat cctagccata
    35581 agttataacc tcataaatgg agtaactggt caatttagtc ttgagccaaa tggttttgtt
    35641 gcgatcggag cttatgcggc agctcttttg cttttaaact cagattcaaa actctatcag
    35701 tttgacgtaa ctgaaccttc aagtatcatt ttagctattc atactacaaa ttttattttt
    35761 gctatgctag ttagtggtat atgcgctact atcttagcgt taattctagc tatgcctgtt
    35821 tttcgggtaa gaggggatta tcttgctata gttacgcttg gatttggttt tattatccag
    35881 cttttagctg taaattttcc tgcttataca aatggctctc ttggcttaaa tgaagtttta
    35941 agagtagatg gggatggaaa tattagcaga tacacaaata tattttatag cggatcggtg
    36001 gcgataatag ctgttgtcgc tattttaaat ttaatatact caaaattcgg aagagctatg
    36061 aaagcagtaa gagatgatga ggacgccgca actgctatgg gtataaatac attcagagtc
    36121 aaaacattgg ctttttgtgt gagcgcattt tttgaaggcg tagggggtgc tcttttggtc
    36181 gggcttttag gcagcgtaag cccggatcaa tttacattta tgtttacgtt ccaacttctt
    36241 atcattatag ttcttggagg tcttggaagt acgaccggag caatactagg aacgattttg
    36301 gttataggag gaagcgagtg gttgagattt ttagatgaac ctatgaatat atttggctat
    36361 gaaactcctg cttttccggg tcttagaatg gtggtatttt cagtagtgct aatatttgta
    36421 atgctgtttg ctagacgagg aattatggga caaatggagc ttggagaatt atttaataaa
    36481 tttaaaaagg tcggtaaatg atacttgaac taaaagatat cagtaagagt tttggtggag
    36541 ttcaagctat cgcaaagaca agttttggtg tttcagaagg tgaaattttc ggtcttatag
    36601 gaccaaatgg cgccggaaaa accactatgt ttaatataat aaccggagca tacactccaa
    36661 ctagcggtga aataagattt aattctattt tattaaatag tgttaaacct cataaaatag
    36721 ttagtttagg tatagcaaga acatttcaaa atatcagact ttttagctct cttagtgttt
    36781 tagacaatgt tttgataggt ttaaacaact ctacaaaata cagcttttta gaagcaattt
    36841 ctcatatagg acgttttaga aagtctgaaa atttagccaa acaaagagct tcggagattc
    36901 ttgaagaact tggtattttc aaatttagaa atgaatttgc aaatagcctt agctacggtc
    36961 agcagcgtaa agtcgaaata gcaagagctt tagctacgaa tcctaagcta ttattattag
    37021 atgagccagc cgccggtatg aatcctagcg aaacggacga attagcagag ttgatattta
    37081 gtttaagaaa taaaaataag cttagtattt tattgattga gcatgatatg aaatttgtaa
    37141 atagactatg tgataaagtt ttagttttgg attatggtaa agtgatattt gaagggcttc
    37201 ctagtgatgc cgtacaaaat aaagatgtta taactgctta tttgggagat tttttagaat
    37261 gataaatgtt aaaaatttac acgtatatta cggtgttata gaagcagtca aaggtataaa
    37321 tttcagcgtt gaaaccggtc aaatagtaag tttgataggc tcaaacggag ctggtaaaac
    37381 atctacttta aacgccctta taaactcagt taaaagaacc ggagaaataa gttttttggg
    37441 ttatgaaaca agacgccacc aaacgcacac catagtaaga caaggaatat cgttagttcc
    37501 tgaaggaaga agagttttta taaatttaac agtagaagaa aatttaaaaa tgggagcttt
    37561 taataattca gaaaattatg aacacttaag agatgcgatg tatgagtttt ttccgcgtct
    37621 taggcagaaa aaagatcaat tagccggtac tttaagcggt ggtgaggctc agatgttggc
    37681 tatatcgcga gctttaatga gcgagccaaa acttcttatg ctagatgagc caagtttagg
    37741 actagctcca aagatagtcg gcgaagtttt tgacataatt ttaaagctaa aagaagaagg
    37801 tataactata cttttagttg aacaaaatgc ttttttggca cttaaaatta gtgattatac
    37861 atatgtgctt gaaaatggtc atatagttat ggaaggtaac tcaaaagata tgataggcaa
    37921 tgatgaaatt aagaaaaaat atttaggtgc ttgaaagtat tagcaaaata tttatttttt
    37981 ggtaatagaa tttagccaga cgtgacaaaa ttttaaggat tttaatggat atttttaaaa
    38041 aattattttt aagtatgggc tccgctgtta tacttttttt aatatttgct attagtagcg
    38101 gtgtagcaac tattatagaa agtgtttata atactcaaac tgcatgggct atagtttatg
    38161 gtgctgggtg gtttgcttta gttcagcttt tgcttggcgc aaatcttgca tacaatatag
    38221 ttagatacaa gcttttaaat ttaaaaaaac tacctgcgct tatattccat gttagtttta
    38281 tttttatact tttaggcgct gctcttacta gatatatcgg ttttgaaggc caaatgcata
    38341 taagagaaag cggcgagagt aatgaaattt caacttctca aagctatatt cagctaaaaa
    38401 gttttgatga gggaaaaact tatatagctt cagagccaaa atatatctca agcgcttggg
    38461 gaaatagttt taaattatct cttgatgtag acaataaacc agctatttta acctataaaa
    38521 gttttatgcc aaatgctacc tcggcatggg ttcaaagtga taaaggtgag cctgttttgg
    38581 agcttatatt ttctaatgat acaaatagta gatcagttac tttaaaagaa aatgaaagta
    38641 tcgaagtagg cgatatcagt tttacattta atgatactcc aaagcaatct aaatttataa
    38701 atatagtttt aaaagacggt aagtttttta ttaaaacaaa tcaaaatata gattatatgc
    38761 aaatgagcga tatgagtaga ggctctatac caaaagataa aatagtacct tttgagggat
    38821 taagattgta tagtatcgac ggtataaatt ttgctcctaa aaccatgctt gcttcagcca
    38881 taaaaggagt tagacaagta agtgataatg agcgaggctc agacgctatc atagctactt
    38941 taagttataa tggagatagt aaagaaatat ctatgcttaa ttttatgcca ggcgataccg
    39001 tagttgtagg cggtaagaat tttgaggcta cttggtctcc tatgatgata aaacttccgt
    39061 tttctcttta tcttaaagat tttgaattaa aaagatatcc aggttcaaac tctcctatga
    39121 gttatagtag cgatgttata gttaaagatg gggatttaaa tatggattat aaaatttata
    39181 tgaaccacgt tttagatcat agtgggtata gattttttca aagcagttat gatatggatg
    39241 agttaggaac tattctttca gtaaataaag acccgggtaa aattccaact tacataggat
    39301 attttttact aggtttagga ttatttttaa atattttaaa tccgtattca agatttagaa
    39361 aattagctaa attagttaat gaagcaaata ttaaaaatgc cgctgtattc ttgatagcct
    39421 gtagcgtaat atttggagtt agtgatctac aagcttataa ttcgcttcct actatatcta
    39481 aagaacatgc acaaaatatc tcaactatag ttgttcaaag tgccgatggt agaatgaaac
    39541 cttttgatac ggttagtcat gaagtattaa ataaactata cagaagtgat aattacaact
    39601 ctatgaacgc aaattctgtt tttttgtcta tgatggtaaa ttcgtcttat tggagaaatg
    39661 tacctattat caaaataaca gataaagagc tgaaaaaagt attagaaatg cctataaatc
    39721 aaaaatatgc aagttttaac gatttcttta ctaaagatag cagtgacaat atggagtata
    39781 agctgataaa atacagcgaa ctagcaaata gaaaatctcc tggagctaga aatcagtttg
    39841 ataaagatgt tataaaagcg gatgaaaaat taaatatact ttatatggta tttatgggcg
    39901 agttatttag agtaatacct aaaaaagatg atgtaaataa tacatggttt tctccggctg
    39961 gagctataat gagtttctct cctagcgaag caagggaagt gactacttta ttgcaaaatt
    40021 actttgatgg agtggctata gcgcaagata gcggaaattg ggaaaaagcg gataaaactt
    40081 taaacgatat aaaagattat caaaagaagt atggcgcggc tgttatgccg aatcagaaga
    40141 aaatagaact tgaacttgct ttcaataaat acaagatatt ccaaaattta acgcccgtat
    40201 atcttttagc cggttttgct cttcttatag ttgtattcac aagaatgata agaccaaaaa
    40261 ttaagataaa ttcagtattc aagatagttt atattataaa tattttagct tttgcggctc
    40321 atactatagg tcttggactt agatggtata tagctgagca tgctccatgg agcgatagct
    40381 atgaaagtat ggtgtttata gcttggtcat tagcatttag cggtatggtt tttgctagaa
    40441 gttctgctat atctttggct ttgacttcta ttttagcggg tgtgactcta tttgttgctc
    40501 acttaagctg gatagatcct cagatcacta ctttagttcc tgtgcttcaa agctactggc
    40561 ttactataca tgttagcgtt ataactgcta gttatggatt tttaggtctt tgttcgcttc
    40621 ttggattatt tactcttgtt ctatttgcct tacaaggtaa aaaagaaaat agtgaacttt
    40681 caagaaatat cttagaggct actaggataa atgagatggc gatgatactt ggattaagcc
    40741 ttcttgtgtt tggtaacttt ttaggcggag tttgggcaaa tgaaagctgg ggtagatatt
    40801 ggggttggga tagtaaagag acttgggctt tggttagtat attagtttac gctgccatcg
    40861 ttcatatgag atttgtccct aaagtaaact ctcagtatgc atttgcagtg gcatctatgt
    40921 ttggatattt gtctattatt atgacttatt ttggcgtaaa tttctatttg tctggtatgc
    40981 atagttatgc tgcaggagat ccagttccag ttccaaattt tgtttgggta gcatttgctg
    41041 taatgatagt tataagttta ttagcttata gaaataaaaa gtatagtaag aatttataaa
    41101 gttcttacta tcttacttga agcccatttt gggctttttt aaaattttac aaaaaaggta
    41161 ttagcttgaa tgaaaaattg atatctggaa ttatagcttt aattatcatt gctttaatta
    41221 ttatttttat attagttata gttatggttg caaaaaacaa accaaaagca aaaactgtac
    41281 atatagctat aaataaagat agcaaaggtc ttgatataga agatcttata tctattgttt
    41341 cagataaaaa atctacaaaa gaggatattt tcaaagcgtc tcaatacttc attaaaaact
    41401 ttaaaatacc tcctaagcta gacggcaaag ctcctccaga atcaaagata tatctgcgtt
    41461 ttatagcact tgttgcagca cataaaaact cagatgctaa aataatagca tatatagaca
    41521 acgagattaa aaaatcaaac tctaaatacg gaaatgagat tgataaatat gaaagaaacg
    41581 gtatagcaag gcgaactaga ttttaagtaa tacccagtag caaatggcgc tcattaatcc
    41641 ggcaaacgct cctgctatca tatcatcacc cataacgcca agaccgcctt ttacgttttt
    41701 atcgactctt cctattatgc taggctttgt tatgtcaagt attctaaaaa atataaccga
    41761 taaaattatg gccaaccaac tagcagaact tatgctgata gctaaccaaa cacctgctac
    41821 ttcatctata actatatggc tttgatcgtg ctctttggtt gtttcttcgt atttatttat
    41881 tatatttata gaagctaaaa atagtaaaat agaagctaaa aatagagttt gtgcgcctaa
    41941 atatttcagt attaaaactg caataaccgc gcctgctata cttccccaag ttcctggagc
    42001 cggcttcata agtccaacgt aaaaaaatgt taaaaatagc ttttgcacta aaatatcctt
    42061 attttaattt aagttaaaga tgttgtttga tagagcctca taagctcttc ataaaactct
    42121 ctttggctat gactctctaa tataccggaa tttggaaaca gatcatcata aattttttgt
    42181 aggtttttaa atttatttgg aaaaagttcg cttaaaatca tagatgaaat ctcttttctc
    42241 ataagaatag caggaggtat gataccttca aatagtagtt ctttaagagt ttgaggatga
    42301 tattttatat gatgatgctg tccgtgaggg caggttttaa tgctcactat agtacggcac
    42361 tgattacaat aaactagctc aggcataatg ataatatcga tatttaaatc ttttgcatat
    42421 ttgtctaata ccgtgtttgc ttgattatca ttataaaaca ttcctattcc gccgtgattt
    42481 tgtcctacta caagttttgt agcaccgaaa ttatgtgcag ccaagcactc taaaacagga
    42541 tttatatgat cactaaacag atatgtattt tcaaaaggaa ctataataac tctttctctg
    42601 ggtaaaaaat tatctctaaa tagttcaagt gttctttttc taagatcgaa actgagtcgt
    42661 ctatcgcttc caaatgttcg tataagaaat aaaattgtga tatctgcttt gtctatggtc
    42721 attctcacaa gtctttcatg aagtctgtga aatggatctg ctgtgagcat aagagcggtt
    42781 acttttttga tatttttttg tttgattata ttatgaatgt tctgttttat ctgtcttaaa
    42841 tcatcttcgt atatcacaaa ctcgccactt accgcaaact caccggctct ttggttttct
    42901 ggtagttcga tatctcttgc tctaaatatg ctgtgagtaa tattgctcag tttaaatatc
    42961 gatgaaacaa tgatatggcc tattatttgg ttatctttta aaatatctat tctatcgcct
    43021 tttttggcat tttttatggt ttcttgattt ctttttccat atggcgcaaa cgtatatgcg
    43081 taaggcatcg gttcgccttc aaagtatccg ctttcttcag atatttttgc ttctttttca
    43141 ttcataagtc ttgtaaattt acttagaatt tgattttgga ttaataccag cgttccatac
    43201 gcttcttgat ttattaaaat cgtactattt tttctttgtg agatcatgct tttttctctt
    43261 ctcccagagt gattttctag aaataccaag tcttttagaa agttcggtat ctggaaatgt
    43321 gtcttgatag caaagtatca tatgttttac atattcatct attgtcaaaa tctcatcggc
    43381 ttgcaaacct ttatcgtttg tatttatgat aactttatct aaatttaaaa tattcagatc
    43441 cacgtttgaa gatatgacta cattttgatt tgatattaag tttaaaaact cgtctctact
    43501 atctgctttt aatttatcaa attccgttat atatataaat gagttcggtt ttaaattttt
    43561 tattatatct gcagtatttt cactatctaa gtctatgatt tcataagcca aatttaactc
    43621 ttttgcataa ttaaaaacaa agctatccgc atattgattt ttgtccgtta ctatcaaaaa
    43681 cggcattctt agctttttga agtcgtattt tggtgttttg tatgttttaa caaacgactc
    43741 tataagactt tgatatgttt tgtttagtat ttcatatttt ttgtatgatt caaatagctt
    43801 tatttttctt actaactctt ctatcataaa tggtttttgt atataatcat cagccccggc
    43861 ttttatcgga ttagataccg tatcgttgct aatgtaactt ataagaagta ttattataga
    43921 tcttgagtgt tttttaataa cttgataaaa atcttgtccg ataagtcccg tagagagtaa
    43981 cacaacatca aatttatcgt cttttagcgc atctgttgtg caagacgcaa tctcacagct
    44041 atatccaaag tcggctagtt tgctagatat gctttgagct aggtatattt cgttttctat
    44101 gattaaaact ttcataaaac gttccgccag ttaaagtatt ttaaatttac aatcgcattt
    44161 gcagcgattc cctcgtttct tcctataaat ccaagatgtt ctgttgttgt agcttttata
    44221 tttactttat gcaaaggaat gcctaatata tcggcaacta tttttgccat agcatctttg
    44281 tatggtgata ttttcggact ttgtgctatt atggtgatat ctgcgtttat gatatcaaaa
    44341 cctatgcttc ttattaaatt tacgctattt tgcaaaagta tttttgaatc tatgtcttta
    44401 aatttagagt cgttatctgg ataaagctca cctatatcag gagcgctagc agctccaaga
    44461 agcgcatcac aaagcgcgtg taaagcaacg tctccatcgc tgtgagctat aaaagctttt
    44521 gaatacggta ttttgacacc gcaaagagtt ataaaatcac cttctttaaa agcatgcacg
    44581 tcaaaaccgt ttccgcaaaa tatgtcattt gatggagaat tcaagtttag gcgttttaag
    44641 tcatctttat aagtaagttt ttttgctctt tcatcgcctt ctatatacca gactgttccc
    44701 cctatagctt ttatagcaga gctgtcatct gtaaaaatat tatctgtttt taatgctttt
    44761 ttaagcatat ttgtgcgtga tagttgagga gtctgaatca gttttaattc atctctgttt
    44821 atgtattcgt tttgatatat tacgctatca gaaattttaa gggccggaac tatgcaatct
    44881 gcattatgag ccgattctat aagtttagtt ataagctctt ttggtatatc cgctcttgct
    44941 atatcgctta ccattacgaa ctcgctattt atattggaaa tagcatttct aaggctatct
    45001 tgccttgttt ctccgccttt tataaattta aaatgactac tgaatttgcg catatattca
    45061 cattcatttg agacaactat gacatcttta aataagtagt ttgaactaat attttttgtg
    45121 gcataaagcc aaagtggatc atcgccggtt cttagccact gtttttttga ttgcaaacca
    45181 aaacgagtgg aatttccggc gccaagcata atcaaagaga gatcaagcaa agcttttcct
    45241 ttagtaaagt gttacgaaat tatacacttt tttatcttac attgcaatta ttttattttc
    45301 aaatttaaaa ttgtaagtta aattgctttt caattatatt tcagtacaat agcaaaatct
    45361 aaaaataagc aaggaaaaaa tatgagaaaa gattggtgcg aagcccgtaa aaacgaccct
    45421 acgccaactc aaatgtatta tgctaaaaat ggagttataa ctcctgagat ggagtatgta
    45481 gcaaaagtag agatgctaaa acctgagtat attagacaat tagttgcaga aggaaaactc
    45541 attatccctg ctaatataaa tcatacaaat caaattccaa tggcaatagg taaagccgta
    45601 aaatgtaaaa ttaatgcaaa tatcggctca agcgcacttg ctagcgatat aaacgaggag
    45661 atagaaaagc ttaaagtatg tttaaaatac ggagcggata ctgttatgga tctaagcacc
    45721 ggcggagatt tagatgagat aagacgcgct attatagcaa actcaaccgt gcctatcgga
    45781 accgtgccta tatatcagat aattcatgat ataaaagatc ttgataatct aactcctcaa
    45841 attatgcttg aatgtataga aaaacaagct aagcaaggcg ttagttattt tactatccat
    45901 gccggatttt tacttaaatt tatgccttta gtagcaaaaa gaaaaatggg gatagttagt
    45961 cgcggtggaa gtcttatggc tagttggatg atgaagcatc ataaagaaaa cccattttac
    46021 gaagctttcg atgagatatg cgatatttgt gctaaatatg acgcttcgct aagtcttgga
    46081 gatagtttaa gacccggctg tttgcatgat gctagcgatg aagctcagat gagtgagctt
    46141 gctgttttag gtgaacttac taaacgagca tgggagaaaa acgttcaagt tatggtagaa
    46201 ggcccaggtc atgttccatt taatcagatc gagtttaata tgaaagaaga gaaacgcctt
    46261 tgtcacgatg cgccgtttta tatacttgga ccgcttccta ctgatatcgg agcaggttat
    46321 gatcatatca cgagtgcgat aggcggaacg atggctgcat ttcatggagc tagtatgctt
    46381 tgttatgtta ctccaaaaga gcatcttgga ttgccgaatg caaaagatgt aagagatggt
    46441 ataatatcac ataaaatagc agctcacgca gcagatattg ctcttggtag agtaggagct
    46501 atagagcgag atcatgctat gagtgatgct agatataaat ttgattggaa caagcagttt
    46561 gagcttgctc ttgatcctga taaagcaaga gaacttcatg atgagagttt gcctcaagac
    46621 gtatttaaag aagctgagtt ttgctctatg tgtggaccta agttttgtgc ttataaaatt
    46681 agtcaagaaa tagcaaaaat agagtgcagt gactatccaa aggagaaaaa atgacaaatg
    46741 aacaaatttt agaagagtta aaaaaagtaa tatatcctgg atttaaaaaa agtatagttg
    46801 agtttggctt tgtaaaagaa gttgatccgg atatcgtagt tgagatagtt tctgctaagc
    46861 cagaaatcgc aactaaagta aagcaagata tagaatcttt aaatttagat agaaaaatta
    46921 ttattcaaac accaaaacta gaagaagaaa aaagtaattc tagaagcggt aaaaatatag
    46981 cgcctcagat taaaaatttt gttatggtaa gcagcggtaa aggcggtgta ggtaaatcaa
    47041 caacaacttt aaatttagct atctctttag ctaaacaagg taaaaaagta ggacttttag
    47101 atgcagatat ttatggtcca aatataccta gaatgcttgg atgtcaaaat gaacagccaa
    47161 gtgtagttgg ccaaagatta aaacctatac tgactcacgg tatagagatg atgagtatgg
    47221 gaattcttat tgaggctggg caaggactta tgtggcgtgg agctatgata atgaaagcta
    47281 taactcagct tctaaatgaa gttatgtgga gcgatcttga tgttttgttt ttggatatgc
    47341 ctccaggaac gggagatgcg cagataactt tagctcaaag tgttcctgta actgctggaa
    47401 tatgcgtaag tactccgcaa accgttgctc ttgacgactc agcaagaagt cttgatatgt
    47461 ttgaaaagct tcatatacca gtagcgggaa ttgttgaaaa tatgagcgga tttatctgcc
    47521 ctgataacgg taaagagtat gatatatttg gtaaaggcgg aactagtgag ttggctagtc
    47581 agtatgatac tgagatttta gctcagatac ctatagagcc atcgataaga gtaggcggag
    47641 atagcggaaa accggtaagt ttttatgagc caaactcagt ttgcgcaaaa agatatgaag
    47701 aagcagccgc aaaactttgg gaaaaaatcg agtccataaa tgcagatggt ggagccgata
    47761 attctgctat tcaaccagat aatagcggta aagcagcttg tcattaaacg gcattttatt
    47821 ttgagtaatt ttaaggaaat tgtaaattat aaatttggtt caaaatcctt aaaattacct
    47881 ataatgatac tttgaaagta ctattcaaat ttatttatat tgtaaatacc gaccacgaca
    47941 gttaaaaaat caaaataatt tattaaattt agttctaata tacttttagc tataatcagc
    48001 caaaaattac aaatttaaag gggcattatg agtatcaaaa atcaagatga gcttaaaaaa
    48061 tttacagatg agattcgctc taaaagtggc tataaagatc cgtttgcttt tgccatcggt
    48121 agagtacaaa aaggcaaggg cggcaagaca ataagcgtaa attactctgt tgtaaatttc
    48181 aaagaaaatt acggaagtgc cgcagtttta acatgggcta tagaaaaaaa tggtcttaaa
    48241 atagacttta gcgataccga gtttactgtg ccacttacag ctcctgctat cagcgatgca
    48301 ttagaagttt ttgacttttt agtgccgcag agcgagggcg ataaacatag aaatatccaa
    48361 aatttactag ttttagatga aattttaaat gaagaaaacg gctcagaaag cgagtttgta
    48421 gtaacgttta tatatgagga tgcggcgcca aaaagcgtag aaagtgtata tttaaaactg
    48481 tatcttttat ctctaaacaa ggttgaaatt agaagtataa atttaaacgg tgcatttgga
    48541 atacttccaa atttagcatg ggacgcgcat tctcagcctt atgaattaga ctatttaaga
    48601 gaaaatgaaa tttggttaaa gatgaaaggt tggtatccaa atataataag cgtagataaa
    48661 tttcctcgct acttaagcca tattatcccg gcggataaca ctaggatttt agatagtgca
    48721 aaagtacgta tgggagctca gttagcacca ggaacaacgg ttatgccagg agctgcgtat
    48781 ataaatttta actcaggaac gactggagca gttatggttg aaggcagggt tagtagctgc
    48841 gttagcgtag gtgagggaag cgatgtcggc ggcggcgcgt ctattttagg cgtgttaagc
    48901 ggaacaaacg gaaatgctat aagcgtcggt aaaaaatgtc tgctcggtgc aaattcagtt
    48961 actggagtac cacttggcga tgattgtata gtggacgccg gagttgctat tttagaagga
    49021 actaaggtat ttatagacga gaaaaacaga tacgagttgg ctaaaataaa ccctgatttt
    49081 aaatttgaaa aagaaattta taaagcgtta gagttatccg gtttaaatgg gcttcattat
    49141 cgtcaaaata gccaaaacgg tcagatcaca gcaagtatca gcaaaagagc tatcaagcta
    49201 aatgctgact tgcattaaag cgaggcgaat atgttggaag ttaaaagttt gactcagaga
    49261 tttggtcaac aactactttt tgaagatgta aatttaaagt tcaatgcgca caaccgttac
    49321 ggacttatcg gtgcaaacgg tgccggaaaa tcaacatttc ttaaaatttt aagtggcgaa
    49381 actgattata caagcggtga aattgttata gaaaacggta aaaaagtagg cgtactgggc
    49441 caagatcagt ttgcttttga gagttttact ctaaaagatg ccgtactata tggcaataaa
    49501 agactttatg atgcagtgaa ggaaaaagaa aaactctata tgagcgagga atttagcgat
    49561 gaggtaaatg aacgtttaag tgaacttgaa attatctcag ctgaggaaga tcctacttat
    49621 gagtatgaaa cgaggataga aaagattttg agttcattag gactgtataa ttttgataag
    49681 cttatgagtg aagtggaaag ctcggataaa tttaaagtgc ttttggctca agttttattt
    49741 cctaaaccag atattttgtt tcttgatgaa ccgacaaata accttgattt ggatgctatt
    49801 tcatggttgg agcgagagct tataaaccat gaaggaacac ttgtagttat cagtcatgat
    49861 agacactttt taaatagagt ttgtacacat attttagatg tcgatttcaa acaaattcgt
    49921 gagtttgtag gtaattacga cgattggtat attgctgcaa atttgatgag tcgacaagca
    49981 gagatggagc gttctaagtt gcttaaagaa aaagaagagt tggaaaaatt tatcgctcgt
    50041 tttagtgcga atgccagcaa ggcaaaacaa gcaactagtc gttctaaaca gctagaaaag
    50101 cttcagatag gcgagataaa aacgtcaagt agaagagacc ctagtatact gtttcgtaca
    50161 aatcgcgaaa taggaaatga gctgatagag ctttcaaatt taaataaaag ttttgaagat
    50221 aagataatct taaaagattt taattttaaa atgaataaag gtgataaagt agccattatc
    50281 ggaagcaacg gtgtgggaaa atccactctt tgtaaaatta taatgggaga acttgctgcc
    50341 caaagcggca aagtacatat tggcgctact atagagcttg ggtattttgc tcaagatagt
    50401 tcaaataaga tcaccggaaa tttaaaacta tacgagtggc tgcaagatgc gaaaaacaaa
    50461 gatcttgatg agattagaaa atgtcttggc agaatgcttt ttagcggttt agaacaagaa
    50521 aaggaagtcg gtagtttaag cggtggcgaa aaacacagac tcatgctttc taagcttatg
    50581 ttgcaaaggg caaatgtatt agtacttgat gaaccaaata accatcttga tcttgaagcc
    50641 attatcgctc ttggcgaatc actttataat tttagtggag cttgtatctg tgtaagccat
    50701 gatagagagc ttatagatgc atttgcaaat agaattttgc atataaaagg caatggcgat
    50761 atagttgatt ttaaagggac ttatgaagag tatcgcttaa gtttagaatc ttaaataaac
    50821 ctttgtttag tgaagatttt taaatttaac ggaaatttaa aaaagcttta tacgataagg
    50881 ctggaaactc cagccttata aatgaaaatt attttacagt tgcaagtttg cgtctcatat
    50941 atgctatttt gctttgaagt ggaaggtgct taggacagtt gtcttcacaa cctagtaagc
    51001 tcatacaacc aaacacgcca ttatcatcac ctactagctc atagaagtca tcatcgcttc
    51061 tgttgtctag cggatcaact ttaaatctag ctacgcggtt aagccccact gcaccgataa
    51121 aatcaggtct cataagtgca gttccgcagc tcgctacgca tataccgcac tctatacagc
    51181 gatcaagttc aaaagtttct tgagcagctt ctggatcaac cttctcttcc attttgctga
    51241 tatcggtttc tttgtttgtg tgtatccagc tttctacttt tttactcata gcattcatcc
    51301 agtttccagt atcgacgcta agatctttta gtagtttaaa tgccggcata ggcataagct
    51361 ctataacgcc gcttggatag tcttttgtaa gagttctaca agcaagttga ggtcgaccgt
    51421 ttacgaccat accgcagctt ccgcagatac ctgcacgaca tacgaagtca aagctaagac
    51481 ccggatcaaa tttttctctg atttggttta gcgcgataaa aagcgtcata ccgtctgttt
    51541 cttctagctc atactcagca aagtgcggtt tgctgacttt gcttagcgga ttatacttaa
    51601 atgctcttat ttttattttc ctactcatag ccaattcctg ctctttcatt taatgcttta
    51661 tattttggtt gaagctcata atgcataaga gcctcttgaa tctcatgtct tgattttccc
    51721 tcagcttcta gttttgctct taagctatct acttcttctt gacgttttgc cgataacgga
    51781 ttttctatga tattgccttt tgcaccgtat ccacggaatg caggtggcat ctccattttc
    51841 atgatatcaa gctcttcgta ctcgaccgta ggcatagtat cgccttcttt ccaactagtt
    51901 agagttcttt tacaccaatt aagatcatca cgttttggat agtcttctct ataatgagca
    51961 ccacgacttt cagttctaag aagtgcgccg tacgcaacgc aaagcgcaag tttaagcatc
    52021 ataggaacac ggtaagcttc ttcaagctca ggattgccaa ataactcttt gttgcttagt
    52081 tttacgtttg ttgattcttt gtaaagctct tcaagctctt ttacagcttt tgcaagtccg
    52141 tcgcctgttc taaagatagc aacgtgttcc cacattatat ctttcatttt atttttgatt
    52201 tcaaatacgt tgtattttcc gtctttattt aaaagctctt ttaagtagct ttctgttttg
    52261 tttacaaatt tttctaatgt ttgagtttgt atatctatct cattttcatc gcaatactga
    52321 gcaaaataat ccccgactat cataccgcta actacggttt cagcaacgct gtttccgcca
    52381 agtctgttaa atccgtgcat atcccagcaa gccgcttcac cgcaactaaa tagacctttt
    52441 agagtttgac tctcaccatt tggttttact cggataccgc ccatagagta gtgttgcata
    52501 ggaaggatcg gagcccagcc ttttggacct tcatcggcag gatctatacc gttgaaaatt
    52561 tggcaaattt cttgaacgtc acgtaagttt ttctcgatat gctcacgtcc aagtatgctg
    52621 atatctagcc atacgtgttc accataaggg ctttttacgc ctttaccgtt tctgatgtgc
    52681 tccattatac ggcggctaac aacgtcacgg ctagcaagtt cttttttctc aggctcgtaa
    52741 tcaggcataa agcgatatcc atcgacatct cttaatagtc cgccatcgcc tctacaacct
    52801 tcagtcaaaa ggataccaga tgggacgata ggagtcgggt ggaactgaac tgcttccata
    52861 tttcctagtt ttgcaacacc tgtttcaaga gcgatagcag caccgatacc ttcgcatata
    52921 accgcgtttg tagtgtgttt ataaattcta ccgtagccac cggttgctat aagagttcct
    52981 tttgcaacat aagcagttat ctctcctgtc acaagatcgc gaactatagc accataacaa
    53041 cggttgtttt catggatcag agctatagct tcttttctat catgaacttc aacattatgt
    53101 tttaaagctt catttgcaac gccaaataac attgtatgtc cggtagcgtc agcagtaaaa
    53161 catgttctcc attttttagt accaccgaaa tcacgactat ggataagccc atgaacttca
    53221 tctttttcat caatagttgt tttttgtgcg tttataatag cacttctttt gccttttgtg
    53281 attctagtcc acggcactcc ccagctagca agttcacgta tagcttttgg agctgtttga
    53341 acaaacattc tagcaacttc ttgatcgcag ccccagtcgc taccttttac ggtatctgca
    53401 aagtgaacat cctcgttgtc tccctcactc atttttgagt tgccaagact cgcttgcata
    53461 ccgccttgag cggctgccga gtgacttctt tttacaggac aaagacttaa aactaccgta
    53521 ctaagtcctt tttctccggc tgcaacagca gctctaagac cagctaaacc gccgccgatt
    53581 actagtgcat cataatattt tacattcata ctcttactcc gttgctaggt atttgaaaaa
    53641 cttgcgctgt tttccaattt ccagttgtgt agttgttata gcctattttt aagaaagctg
    53701 ctaaactaag tagcccaagg actatgaaaa atacgcttaa gatccatttt gcttttttaa
    53761 gtttttttct agactctttt gcgttgtttc cttcaaacca accccatttt acacatagtc
    53821 tatatagacc tatgcttcca tgaagttcaa cagcaaaaag cagtactaaa taaaacaacc
    53881 acataaagtg actaaacact ctttgtgagc taagatccgc actgagtttg tcagagtttg
    53941 taatgattat gataaggtgg gcagatgcta ggaagaacat tataaaacct gtacaggctt
    54001 gtatccacca aagcgtcgta tcttcatgtt tcatacgtac agtatgagca cgataaattt
    54061 gccactgtct aaagtttatc ggcatttttc tcataccaag tgcagcgtgt ataaaaaata
    54121 taacaaatac accagctgct atgaagctag taacatagct catatttgga gaatcagaga
    54181 taaatcttag ctctaataag tgaacgatag tgttaaacgc attatcacta atcagtattg
    54241 tagatacaaa aagcatatgt aaccacataa aaagcccaag aaataatccc gtgccacttt
    54301 ggataaggtc gagtctggca ggaattctac tttttttgcc actctcgctt ataccaagaa
    54361 acccttcgat ttgcttactc ataagctccc cttttggaaa aaattatcta atcgcgataa
    54421 ttatactcta tgcaaacttg aagtaaaatt aaatatttat ttaatttatc tattaaaagt
    54481 taccgctata tagtattttt agttgaattt tatattgagc ttaaaaaccg taatataata
    54541 tattttaatt aattttattt taaagaatta tttaatgttg aaaataatta attcagatta
    54601 aaaaatcggt atcataataa aataaatttt ataaactaaa atttattttt cagtttttac
    54661 tctttttaat ttcaaattta aatataccgc aagaccaaat acaaacataa aaatcgataa
    54721 aatttgaccc atactcatac caaaagcaac aaatcctata ccaaaatccg gttctctata
    54781 aaattcgcta ataaatctag caacagtgta aagcatcgca tacatagcta tcaattcacc
    54841 gtcaaatttc ttaaattttc tataaaaata gagtatagca aatactatgg cgccttctaa
    54901 aaatgcttca taaagttggc ttggatgtct taactgtcca gctaccatta tcccccacgg
    54961 ttcatccgta actcttccga ataactcttg atttaaaaag ttgcctattc gaccaaaaac
    55021 atatcctaaa ggtacagaaa tagccacaag atctagcagc atccaaatgt tttgtctctt
    55081 ttttttacaa aataatagcg tagctatgat aaatccgaca actgctccat gataactcat
    55141 accgcgaatt cctacaaact cgccattatg aaatggatta aaaatttccc acggtttaaa
    55201 tagatagtag ctgctgtttg gatcataaat taagatatat ccgattctcg cgcctagtat
    55261 cacgcctatt tccacccaga agaagtaatt atcaagaagc gagtctgata tatttaattt
    55321 atcttttttt gcaaaatatt tggctgccat tagagctact atgagagcta aaacgtacat
    55381 tatgccatac caatgaacac ttagaccaaa tatctcaaat gccactggat tcatattttg
    55441 atagattaaa ttccagctac ttaaattatt caatttccat ccttaagcct aatgtagatt
    55501 ttaaaatttt gcaatagtct atcaaaaatt ccccaagagc cttataataa tatgtttttg
    55561 cgttgtatct tataaattta gcaaataaaa cagtacttgg caatagatat tcgcttaaat
    55621 aaagtcctaa aagtgcgtga gatttgtcat tcgtatcgtt ttttaagata gcgcttagta
    55681 aggccagcat atttgatata tgagatgatt ttagctcttt aaaaggtttg ttgaagttta
    55741 tggatttgta aaactcatct actttttctt cgctaacttg tttgaaaaac tttagcacac
    55801 acgctccgcc aaatgacgca aggtcacttt ctatactatt agtatcatct gtttgcagtg
    55861 ctttttgcca aagttccaga cctttttcat tttcgatatt ttctgttttt ataacccagc
    55921 tatttgtgag tttttttaaa ttttcttcat tcatagcttt tgcgaaatta tttgcgaaga
    55981 taagagctat gatagagtaa gcttgtgata ctttcatttt tgccaccttt ttataaattt
    56041 aaaactctat ttatgaaatt atacaaaacc ttgcttaaat ctcaccaccg cttttgatcg
    56101 catttactcc gtactttagc cgaatttttg ctagagtatc gcttatggct ttatcttttt
    56161 tattttgaat atcaaaaaga gacatttgcg ctttttcgtt taaacctcct accccgacac
    56221 taagatatgt tatagcaaaa tcacttgttt tatcatgctt gagaaataat tcttttatac
    56281 ttgtttctaa gagtttttgc gtgaaaatag agtgctttgt aacgcttgca tttatgtttc
    56341 ggttgttttt atatttgatt ttgagttcaa atttagtcgg atttacacct agcataaata
    56401 cttcaaaact aacatatctg caaagcacca ttagtctttt ttctatgata tttctatctc
    56461 ttatctcttt aaaagttctt gctatgcaaa gtgattttcg cggtcggttt ttatgaattt
    56521 gatctctgct ttttccgcaa attctactat ataatatcaa accgtttttg cctagttttg
    56581 caaatatttt ttgggcgtta aatacatctt ttatatagat gacgccgtga gattttaaga
    56641 aattttcagc acttgcgcca actcccggaa acatttttat ctcgtagttt tgtatctcag
    56701 aaatatcgtt gataattttg attttagacg gttttgctaa atttgttgca aatttagcta
    56761 taaatttagt ttcgcttata cctatgctag atggaagttt gagctcgttt tttattctgt
    56821 tttgtagaat ttttgcgaaa tttaatggat cgttttcaaa tttagttcct ttcaaattta
    56881 gaaaaaattc gtctatgcta tatttttcaa tctcgtccgt atagtctaaa agtaacttaa
    56941 aaaggttatt tgaaagagtt ttgtatagat taaaatttgt aggtagtata attatatttg
    57001 ggtatatttt tctagctatg cttgagtgca tagtacaacc aataccaagt cttctagctt
    57061 cataactagc acttactata actccgcttt ctataaaatc accaaatata tctgttttgt
    57121 ttcctcctgc tactgctacg actttaccgt ttaaatcagg atttacagtc ctggaggcgg
    57181 aaacaaaaaa acagtctaaa tctatatgta aaaacataat tagaatttca taattcttag
    57241 tctaagcgaa tttaaaacta cactaaccga gcttatactc atagcaagtg ccgcatacat
    57301 aggagttaaa agtagtccaa aaaacggata taaaactcct gcggctactg ggatacaaag
    57361 tatgttgtaa atagacgccc atgctagatt ttcttttatt actttcatcg tatttgtggc
    57421 taaatttata gaaaataaaa ccgatttcaa gtcgtttttt ataagtatga tatcgcctac
    57481 gtcttttgct atatcgcttc cgctactcat agctatacct atatctgcag cttttagagg
    57541 aggtgcgtcg tttataccgt ctcctataaa aataactttt gagccatctt gttttagaga
    57601 gtttataatc tcaaatttac catctggtaa aactcccgcc atgactttgt ctatctcaag
    57661 ttcttttgct acgacaagcg ctgttttttc attgtctcct gttagcataa ctgggattat
    57721 gccaagatct tttatctctt ttatactctg tttcgcatcg tcttttatgg tatcgctaag
    57781 agttatataa cctttgtatt gtttgtttat cgctactaat actattccaa aaccgctatc
    57841 taaaatcttg ttaatctcat ttagatgttc gctgctgata tctatatcaa atgagtttaa
    57901 aagctttata tttcctatta aaatttcccc attgtttgcg tctattccca ttcccggaat
    57961 atttttaaat tcaaaactta agcttttatc taccttatca ggatcgtatc tgactatagc
    58021 ttttgaaata ggatgttcac ttaaagcttc ggcgtttata gctattttta gatcatcgct
    58081 atttaaattt gtatttatca ctgaaatctc accttttgta agagttcctg ttttatcaaa
    58141 tactgcgtat tttatatctt tcattacttc cataacttct ggatttttga ttaaaattcc
    58201 attttttgca cctactgata ttccagaaat gatagctata ggcgttgcta aaccaagcgc
    58261 gcacgggcac gatatgataa gtacgcttat agcggctaaa attcctctag taggagtatc
    58321 tagcatcgtc catatcaaaa aagtcgctat acttatgctt ataaccgaag gaacaaatat
    58381 atttgctact ctatcagcca gtcttgatat aggcattttt tggctacttg catttgctaa
    58441 tagatttaaa atttgcgata acaaagagtc gctatctcgt tttgtaactt tgatatttat
    58501 ataaccgttt gtgttgagag taccagcatt tacgttatct ccgacacttt tatagacagg
    58561 caaactctct cctgttagcg ctcccgtgtc gatctctgca cctccgctta ctatgattcc
    58621 atcacaaggt atattgtatc cgttttttac tactactata tctcctattt ttagctcgct
    58681 agtcggtata gatacgctgc ttccgtcttt tgtcagaata agagctgttt ttgggctaag
    58741 atccataagc gtttttagat aatttccggc tttgattttt gatctttctt ctaaaaattt
    58801 accgagcagt acaaatgtta ttatcattga tgctccgcta aaatataaat atctcatatt
    58861 ttgcggtatt gcctcgggta ttataaatgt aaaaatagag tataaataag ccattaaagt
    58921 acctaaaaat ataagtacgt tcatatcgta gtttctattt ttcagcgaag agatcgcatg
    58981 tttataaaag ccaactccgc agtaaaatat aacaatactt gttaaaagta gcaaaaatag
    59041 agatttaaaa aaattatctt gtccggtcat ttcaagagcc atagtaactg tgctgaaaat
    59101 cgcggctata attaacttat tttttaaatt tagaacttct ttttgtttta cggcttcaag
    59161 ctcgtcataa tttgcgacga tcccgtatcc tagctttttt atttttgatt ttatagtctc
    59221 taatctgcta ttatcatcta tttcaaatac ggcgctagat tctgcaaagc taactttaga
    59281 acttataact ccatccaatt tttttgtact tttttctatg gcgttagcac aatttacaca
    59341 cgtcattcca gtaatgttta atttaacact atttgccaaa ataactccta gtctatttct
    59401 ttgatgactt tatatcctaa gtcttctaat tcggatttaa atttttgctt atcgctattt
    59461 tgcaaatcac aacttagtat tcgcggattt acgctaagat ctatttctat tttgccaaaa
    59521 tcgtcttcta atgaattttt tattgtttgt gcacactttt cgcaatttat attatccact
    59581 acaaatttca ttttatctcc ttaatcatat agatatattt gtggtttaga atttctttat
    59641 ttccgcaagg tttaaatcca actcttttat aatagctttt gacatctgat ttggcttcat
    59701 ctactaaaag agacagattt atgccaagtt cttttgctcg taaaaaacta gcttctataa
    59761 gttgtttcgc cactcctttt cctctatgat tttcatctac tgctatacta tctatataca
    59821 gctcattgtt ttgggtatcg cattcaacct taatatttgg ctcaattccc agacttttta
    59881 atctatttat aaatgcgata tcaagttctt ttgccatttt tgactcatat atacaaatag
    59941 ctcctataac ttcattttta aactcaaaaa ctaaaatatt ttcataactt aaacgattat
    60001 ttgttgatct aaaaaactct tctaaaatag tatttgaaat tttaatatct gtagttccgc
    60061 taagagtaaa tgctatattg tccattgcta aatttagtag ttctataact cttttcgcat
    60121 catttttcgt agcatttcgt atcattcttc atccttgatt cggtattata ttttttttga
    60181 ttaaattaat gattaatata aaacattact aaatttaata tagtttaata tcgcatcaaa
    60241 taggcgattt ttgggctatt tttattaaaa ttatacaaac ttgctttatg tttggttaaa
    60301 atattcaata tataaagata attttataag agttctacga cgatataaca gatactaaat
    60361 ttagcatata gatatttttg atttttaaaa gttttgtttt gatacaatag cgcaattttt
    60421 aattaaaaag gtaaattttg tataagtttg ataaatttaa taaatatgat cttagatgga
    60481 cgatgtcgct ttttggtact gcggtcggag ctggaatttt atttttgcct ataaaagccg
    60541 gagtaggcgg catatggcct gtttttatca tggctatttt ggcttttccc atgacttttt
    60601 taagccatag ggctttggct agattttgca atgcttctgc taaaaaacag agtgatataa
    60661 cagatgtttg cgaggagtat tttggtttta agtggggtta tatcatcact tttttatatt
    60721 tttttgcgtt ttttccggct tgtataatgt atggagtggg tataacaaat acggttatga
    60781 gctttatgac ttatcagctt ggatttggtg agattaaccg ttttttagtc tgttttgtag
    60841 tcataacttt gatgatgttt gttatgattt ttaatgaaga tttggttata aaagtttgtg
    60901 aatggctggt ttatccactt tgtgctttgc ttcttatgtt ttctttgtat cttataccac
    60961 actggaaatt tgaagttttt tcgtatgttc ctagcataac ggattttggc ataactatat
    61021 ggtttgcgct tcctgtttta gcttttgctt ttgagcatac gccggctatt tcaacgtttg
    61081 ctcttagtat gcaaaggcat tacggagata gtcataaaga ttataaatgc aatcaaattt
    61141 tattttacaa cgccggactt ttgttatttt tcgtaatgtt tttcgtgatt tcttgcgtga
    61201 tgagcctaga tagaaatgat ttcttattag ctgcccagca aaatatacct atagtaagtt
    61261 attttgcaaa taaactaaac gaaccagtaa ttagctattt tggtcctatt atcgctattt
    61321 tagctatcgc tacgagtttt ttcggacatt atttcggcgc tagagaggga ttaaacgggc
    61381 ttgtacataa aacttgcgtt aaattcggta aaaaagaacc caataagaaa aagatcgcca
    61441 agataactgc catatctttt tatatagtta tgtttgtttt atcgtattta aatcctagca
    61501 ttttgggtat tatagatact ttagcaggtc cggtgatcgc ggcggttctg tttttactgc
    61561 ctatgatcgg tatatataac gtgcctgctc ttaaaaaata tagaagcaaa tttgcggatc
    61621 tgtttatagt gctttttgga agcgcgactg tactaactgt tttgttcaaa atattttaaa
    61681 ttttattgga tataatttta agcttaaaaa atagatttct aaggattata atgggacgag
    61741 catttgaata tagacgcgct tcaaaagaag ctcgttggga taaaatgagt aagctttttc
    61801 caaagctatc aaaagcaatt acagtagcgg caaaagaagg cggaatcgac cctgatatga
    61861 accctaaact tcgcaccgcg atagcaacgg caaaagctca aaatatgcca aaagacaaca
    61921 tagacgcggc tataaaaaga gcaaacggaa aagatagcag cgatataaaa actatatttt
    61981 atgacggaaa agcagctcat ggagttcaga ttatagtaga aacggcaacc gataatccaa
    62041 ctcgcaccgt agcaaacgta aagtcgatat ttagtaaaaa cggcggagag atgctgccta
    62101 gcggaagttt gaattttatg ttttctagga aagctatttt tgaagtagtt aaaccaagcg
    62161 gcgatataga agagcttgag cttgagctca tcgacgccgg acttaccgat atagaagaaa
    62221 atgatggaac tctaaccata tacggagatt atactagttt tggtacgctt agtgaaggca
    62281 tagaaaaaat gggacttgaa gttaaaaaag gtagtttgca gttcatacca aactcgactg
    62341 taaatttaga tgaatctgcg attggtgagc ttgagagatt gcttgataag cttgaagatg
    62401 acgacgatgt tcaagctgtt tatactaata tagagtaaat taaatttaaa gagaggtgaa
    62461 gatatgagag aagatttaaa agtttatgaa atagacaaag atgagttagc aaagctaaaa
    62521 tacgctgtga taaaaacaga taaaggcgat atggttgcag agctttttgg agacgacgca
    62581 cctcaagccg taacaaattt tgctactttg gcaaaaagcg gattttatga cggattaaat
    62641 ttccatagag ttataccgaa tttcgttatc caaggcggtt gccctttagg taccggcaca
    62701 ggcggtcctg gctggaggat aaaatgcgaa tgcgtaaatc aaaaacatag gcatctaaga
    62761 ggaagtctat ctatggcgca tgctggacgc gacacaggcg gaagccagtt tttcgtgtgt
    62821 cacagcccac aaccgcatct tgatggagct catactgttt ttggagtatt ggttgatgat
    62881 gcaagcaaaa aaattttgga ttctattagg caaggcgaca aaattcaaac agttgaaata
    62941 aaagaaagct tataaaaata gttaaatttt aaaaataatt attagcttct tacagaggct
    63001 aataattaaa taaaacatta ataaagagtt attttttcgt gactatgtta caatattaaa
    63061 catatcaata atttatattt ctgtttttgt agttatttta tacttattac ttttactttg
    63121 tggtattctt acatcgttaa aattattaag gagatgtttt gagtactgtt gtaaaaagtc
    63181 aaagaccagt ttttgtaaga actataacga atcttgcatt ttgggtcgta cttggtatcg
    63241 tattgggtgt catcgtaggt tttgcatggc cagaacttgg tatagcttca aaaccgggaa
    63301 tcgactggtt tattaaaatt ctaaaatgga tgatcggtcc tattatattt ttgactatcg
    63361 tgtctggtat cataggcctt gagagtttaa aagaagtagg cagcatcgga tttaaaggtt
    63421 ttgtatattt tgaagtagtt agtactttag cgcttgctgt tggtatcagc gcggcatatt
    63481 tacttcagcc tggagtcgga atgaatcttg atgtcaatgc tcttgatccg gctagcgttg
    63541 caaaatacgt gaaagatcca aaagaggtcg gatctgcgct tgctatttta aaaagcgcta
    63601 ttcctacaga tcctataacg ccttttataa aagcaaatac tttgcaagtt ctttttatgg
    63661 cgatcgtaac tgcgatagtt ctatctttta tgcctaataa ctacaaaaaa acttgtatga
    63721 agccgcttga atttgctcaa cattacgtat taaaaatcct agcatggttt atgtggttta
    63781 gccctattgc tgcgtattct gctatggcat atttgatagg taagttcggt ctatcatcgc
    63841 ttataggtat gattcagttg cttgctgtta tggctgtagc gtgtattata tttatatttg
    63901 tcgtgcttgg tatcatatgt tacgttgcta aggtaaatat atttaaattt atgcgtttta
    63961 tagcaaaaga agttttagta gtatttgcta caagctctag tgaaactgct cttgggccgc
    64021 taatgaaaaa gctagaagcc gctggtatat caagaggttg cgttgggctt atcataccga
    64081 ctggatattc gtttaacttg gattgtacga atatctatct ttcgatgagt atcatattcc
    64141 tagctcaagc tttcaacata gatcttagtt ttactcatct tcttagtata cttatcattc
    64201 ttatgatcac ttctaagggt gcagtcggcg taactggttc agggtttatc gtacttgcag
    64261 gaacattagg ggcattgcac gacgtgattc ctgtcgtaac cgtcgcagtg ttgctcggag
    64321 tggataaatt tatgagcgag atgagagccg taggaaatct ttgtggaaat tccgttgctt
    64381 gtctaatagt cgctatttgg gataaaaaga tagatatgga aaaattccgt tacgctctag
    64441 atcatccaga tgagtttagt tttaattgat tatttaaact tttaccggtg attgcgtgta
    64501 tttcgctcac cggtagaatt taaatttagt ctaaacaagt tctatttttt ttcttgataa
    64561 ttttactatt ccatttttct caaaactttt tagtattctg ctgataactt ctcttgaagt
    64621 accgatgata tctgctaact cttcgtgcga taaatttatt attttgcttt ttttagactg
    64681 taaaaagtgc aaaattcttg aatctaaacc taaaaatcta atatcttcta taagagctgc
    64741 catatgctcc attctttttg catattgttc aaaaacatat gtttgaaacg ctttatcttc
    64801 tataaacatc tgggcaatta tacttgtagg tatggtatat ccttctaaat cactctctgc
    64861 gatagctgtt cctatagccg gcatagcgtt aaacgtgcta gtaaaattta cgttacactg
    64921 ttcgccttgt gaaaaatagt agagtagtat gctctgtccg ctctcatgct gacgcaccac
    64981 tctaacttta ccttttgtaa gaaacatcaa atttgggcat gtatcgcctt gtctgtaaag
    65041 ctcggttcct acatccagtt taataaatgt agaattatca tctaaaagct tttgatgctc
    65101 agggctaagt gatgaataaa atcggaaagt tttcatattt taacctttat attagataat
    65161 ggtttgcttg tacaataata tacaaataat attaacaatt agattaatat attaaattaa
    65221 cactaaaata tataaattta tatttaaaat ttaaaattaa ttctgtgatt tatgtcacat
    65281 acataaattt taattcaata tataattaac aaatattttg taattaaagg agaaaagatg
    65341 ctaaactcta ggcgaaattt tttaaaaggc ttagcattaa gtagtgcagc agtagcctcc
    65401 atgaaagctg acgagctttt aagtccggtt caaaaagtcg ctcacgcaag taactttgga
    65461 ccattttatg ctctaactca agacggaaaa atcatagata tacttcctca tcctatggat
    65521 aaacgtccta ctgcgatgac aaaaatgtgg ctagatcgcg tttattcacc gacgaggatt
    65581 aaataccctt gcgttagaaa atcgtattta gaaggtaaac tcggtcacga aaagctaaga
    65641 ggcaaagaag aattcgtgcg cgttagttgg gataaagcgt tagaacttgc ttataacaaa
    65701 attcaagaaa ctccaaaaga aaatatttat aacgcaacat atatcggctg gagtcatcca
    65761 ggaggaattc actcttgtcc ttcgctttgc ggtagatttt ttaatgtagc aaaacgcgga
    65821 gccataggca cggccggaga gtatagtaac ggcgccgcag gagcggtaaa cgtcgatata
    65881 ataggagacg ttgaaaaata ctcgcttcaa accactcacg aacagatatt agaacatacg
    65941 aaaacctatg ttttatgggg agccgatctt tttaaatgta acaaaataga cacgaaagtt
    66001 ccaagccgtg aaaacgatct ttactattca aaatacgcaa aaagcagtat aaatttcata
    66061 tcaatagatc caatctacac cgaaactgct caaatgctaa atgcaaggtg gataaaaatc
    66121 agaccgaaca cggatatcgc gttgatgcta ggcatgatga actatcttta tactagtggt
    66181 aaatatgata aagaatttat agcaaaatac actgatggat ttgataagtt tttaccttat
    66241 attttaggaa aaacggacgg agttgcaaaa acgccgaaat gggctagtaa aatcactaca
    66301 atagatgaaa aaaccatcat ggagcttgca aatttatttg ttaaagatag aacgttttta
    66361 gcaggaaact gggcgcttca aagagcgcag catggagaga tggcggattg gtgtttgata
    66421 gttttagcta gtatgatagg tcaaataggg cttggcggcg gcggagtcgg gttttctatg
    66481 cattttggcg gcggaggaca agctagagcc atagtaggaa ctccagcagg aatatctcaa
    66541 ggaagaaata gagtagaaga cagaattcct gcttcaagaa tagcagacgc catcttgaat
    66601 ccgggtaaaa aatatacgta taaaggcaaa gaaagagtat atccaacagt aaaagttgct
    66661 tatgtggcag gatgtagcat agtaggtcat catccagata caaataatat tataaaagct
    66721 cttcgcactt tagatacgtt tatcgtacaa gagccatggt ggacgccgac tgctaagatg
    66781 gcagatatcg ttttcccggc ttgtacgact ttagagagaa atgatatagc tatgggtgga
    66841 gttcatggta aaaacggcgt ttatgctatg aaaaaagcta tcgaacctct ttatgagtcg
    66901 aagagtgatt tagagatatt ttcacttctt gcacaaaaat ttggagataa agtttataac
    66961 aaatttacag atgaaaaacc aaacgagatg gataagataa aatacgagta tgatatatct
    67021 ccaactgcag aactcatgag ttttgagaat ttttgggagc aagggtatat cgaacttcct
    67081 agaaacgaag agtcttataa attcgttcgt cactctaaat ttagaaatga tccagtaaca
    67141 aataaattag caactataag cggtaaaatt caaatcgtag taccgaaatt cgcagatcta
    67201 ggatacaaag atttcaaagg acatcccgcg tggatagagc ctgatgagtg gctaggcgat
    67261 aaaaatcgca aatatcctct tcacttgcta agtccgcacc caagctatag agtgcattct
    67321 caaggcgata acacttatct taggagcttt tataagataa atgatagaga accagttatg
    67381 ataaatccaa atgacgctaa aaaatatggc atagctcacg gcgacgtagt tgaaatttat
    67441 aacgacagag gcagagtttt agccggagct tatgtaagta aaaatatatc tgagggcgtt
    67501 atggcgttaa acgaaggtgc gtggtatagt cctgaaaata gttctgaaga taagccaaga
    67561 tgcgtaagcg gtcacgtaaa tgtactaact agcaatcgtc cgacttcaag tatggctcaa
    67621 gcaactagcg taaatacgaa tttagtcggt atcaaaaaag ctacaggagt cattccgcca
    67681 aacacggctt ataatccacc aaaaatcata gaggcgtaac atgaaaaaaa tagttttaat
    67741 cttaagtcta tcagccgttg tttttgctag tagcatatat gtaaaaagtg atgaaaatat
    67801 acttcagcta aaagatgcaa aggtgtattt cggaactccg ggagtcgtta taaaagacgg
    67861 tgataaatct aaaatagtta aattcgaagg gtattttgat aacgcaaatc caaatactct
    67921 ttacgcaact aaaaacttta aacttccact tttagaaagt gtaaatttaa aaaaagacgg
    67981 tgaaaaagct agcatcgaac ttgaaatttt aaactcaaat ttgactagtg attggcagat
    68041 cgcatgggaa gatagcggcg atgtatttta cgataaatgt acaaagtgtc atggaacgca
    68101 cgctccaaaa gagtttgata tgcttagttg ggaagggctt tatatcagta tgaaagatag
    68161 agctcagcca acagataatc aagaaatgca aattctaaga tatctctatg ctcatgcaaa
    68221 tgacggtatt ttagaagaga gatgatctta aatttaaaaa gatgtgagcg tcgacttgta
    68281 tctttttaaa tattttaagc aatctataat ttttatgtta gaatttagtg atgagttttt
    68341 aataaaattt aaaaaaagga gctaaatttg aagattatag atgctattta tactcgtatt
    68401 gaagagttta aaatttacat cgttatatct gcttttacag tgatattttt gggtattact
    68461 atatttagct taaacaaagt taaagatgag ttcgtatctt tagctaaaga ttataggatc
    68521 actattacaa ccgagctagc tagttatgtt actgagtgga tggactcaag agtttctagc
    68581 gtgaattcct attcagccat actctcaagc ttgattttag aagacaatat taccaccgat
    68641 agattgtata atgctataga tattttaagt aaaacaaatc ctatgttcga tacttttcaa
    68701 ctctatttgc aaaacgacag acttcttata cacgccggga aatatcttgt gatagatcaa
    68761 aaagaccttg atagaatagc taagtttgca tggtataaag atactaaaga tcacaacata
    68821 actactatta gagttatgcc gaatcataaa acgttaaatg aaaaaacgat aaatatctgc
    68881 tctcctctca tagcccacgg taaatttaaa ggagttttat gcggcattat acgaaccaaa
    68941 aatattttgc agcagataaa aggagtggat aaagatatcg tttcacatct ttttttaatg
    69001 gataaaaatc acgatataat cacttcatac taccagccaa atccatttgc gagtagtttg
    69061 aaaaatatag atagcaactt tagttctaaa gagtttgtaa gcggcggtat gaaagtaagt
    69121 gttttaaaaa catctatgca agattgggca gtaggcgtag gaatcgatga aaacagcatt
    69181 atttcaaaaa gtttaaatgt ggttgcaaag acgtctatta tgatattcgg cttttttata
    69241 atgctgatta tagtggcaaa ttctttgcat aattatatgt ataaaaaggt taaaaagaga
    69301 aaacaagagt atgagtttat acttactcac cagctaaaaa tgatagaaac aggcgagtta
    69361 ataggagtta taagccatca gttaaagcag cctttaaact cgactaaact aatgataagc
    69421 tctgttttac aactaaaaga agataaaaat attagcgaag aagatgagaa aaatagttta
    69481 aaactctgtt tggattctat ggagcattta aacaaaacca tagagaattt caaaaacttt
    69541 tacaaatttg atccgtctca aaatgagttt agtatcaaaa agtccataaa taacttgttg
    69601 gaaatacttc atataaattt tactaaacat aacgtaagcg taagtataaa tgagtgcgat
    69661 gatataacta taacaaattc acaaaatatg ttccagcaag ttcttttagt gctgctgcaa
    69721 aatgcaaaag acgctcttat cgctttttat ccgcacgaat ttaaaaaacg ccatatcgaa
    69781 atagagataa gcagcgatga taaaaatgtc tatataagag ttatcgatca agcaggcggg
    69841 atatcaagcg gcattatcaa aaaactattt tcaaatttga aaattagtca aaaagacgga
    69901 ggaagtggaa taggtttgta ttttgctaaa aagatagcaa atgagagatt aaaaggagac
    69961 ttaaagctag ttagtgctag aaatcctact atatttgagc taaggatgca aaaatgagac
    70021 taggaaagtt aaaaggcgtt gatatcttag ttgttgaaga ttgcgatatg gcaagaaccg
    70081 ctttaaagct gggattaaag ccgtattgtc gttgctatta tgaagcaagt aacggatatg
    70141 agggtataga aatatttaaa aatcataaga tcgatatcat tatcacagat attcatatgc
    70201 cgctgctaaa tggacttgag atgatagaag agataaaaaa gataaagcct caacagagtt
    70261 ttatagtaat tacttcatat gatactgacg agaatttttt tcgctctata aaagatggcg
    70321 ctatgcagtt tatcagaaaa ccgcttgtca tagaagatgt gcaaaatgct ctacttttgg
    70381 caatatctaa aaaagaggat aagatattta aaatatcatc aaacataagg gttaatttat
    70441 ctaacgaaac gatatttgat ggcgaaaaac agctattttt gacgaatata gaaaataaac
    70501 ttctttggct attttgttat aatataaata tggtcgtaac ttatgatatg atagaagagt
    70561 atgtttatga tagtcttgat gttaaaaaag gctctatcca tacggcggtt ttaagactca
    70621 aaaagcatct tgatggtata aatatcgaga atatatcggc aaaagggtat attcttagaa
    70681 aatttagtga aaattaaatt taatgtaaga gtttggttag aggtcaaatg tataatttca
    70741 ttaaatttaa aacaaaggat tcaaaatgag agttaattta ttaattaaaa aatgtatagc
    70801 cgccgccgcg gttttcggtg ctataaatgc agctgcgttt agcgagggag tggattttgt
    70861 aaagttagaa acacctattc caaactccga tggtttagtt acgaaagttt atagttatga
    70921 ttgtccgttt tgctataaat atgacaaagc ggtcacaaaa gcggttatgc aaaaactacc
    70981 cgagatgaaa ttcgagccta tgcatcttgc cacaaaaggt aaattcggca agcaagccag
    71041 tgagcttttt gcggttttga tagctaagga taacgcttca ggaacaaatt tattagacga
    71101 taaatcacta tttaaaaaag ctaaattcgc atactataaa gcctaccacg acaaaaaaga
    71161 gagatggggc ggagatgcta acaatcaaga aaacgtaaat gcatttttaa gcgtaggatt
    71221 tgaagcttct ggtataaata aagctgattt agaagccgga ttgaaagatg aaaaagtaaa
    71281 agctatgctt gagagatggg gaatggacgc aaatagcgga tatgcgtatg gtgtagcaaa
    71341 gatccaaggc gttcctgcgt ttgtcgtaga tggaaaatat cttatctata caaaagctat
    71401 caaaggtata gacgctatgg ctgaacttat aaaataccta catacattaa aataaggtcg
    71461 ttaaaatgga gtttttcaag gacttaaaaa gtgatccgat aggcaaagta gcctctttgc
    71521 aagatgaaag ggctatttgg ataattatgg tcgtggctat gagcggacta gttatagtcg
    71581 ctcatagttt gtttcaaaac tatgtctata tggcgccttg cgaacagtgc gtttatataa
    71641 ggttttctat gcttgttatg gctcttggcg gcgtgattgc cgctataaat cctaaaaata
    71701 ttatcctaaa aattatcgga tatgttttgg gattttatgg agccattata ggaatgatgt
    71761 attgtataaa gctaaactct atacatcacg cagttcatag cgaagatcct tttggcgtac
    71821 aaggctgctc agccgagcct agttttcctt ttggacttcc gcttgatatg tgggcgcctg
    71881 attggtttaa accgaccggg gattgcggat atgataatcc tatagttcct gatgacgtga
    71941 gcctttcatg gcttcaacaa tggtttgtgg atttttatag cgagggttgg tatcttatcc
    72001 cttcgcttaa gtttatgaac atggcacaag cttgctttat agcttacgct gttgctttca
    72061 tacttctttt tgctatgttt atttgctgga ttttaaaatt aaaaagagca taataaattt
    72121 atctgtctaa attcatttac tacattttat aagcccgtaa attcgggctt ttctcctttt
    72181 aaatttaaaa tatactactt tataattttt taagttctaa gtgatgtttt agaaagactt
    72241 tctctttata atatgataaa tttattcaaa aggagaaata atgaaaaaaa tcattgccat
    72301 agcggttgtt tgtggattta gcttagcttg tgcgaaaaat ttagcagatc cggacgtcgc
    72361 ttggaggata aagccgtttg gacttccaaa gccgcttaca aaccggtcta ttttaaatcc
    72421 ggcgatagaa aataacttcg attttactca gcgccaaagc tattattacg ctaatgatgt
    72481 gatcgataaa aacagagatg ctctgcatat aagtggcggt tttataggta aaagctactc
    72541 gggggcagct acttacgata taaaaacaga caacgcggac gcacatatcg ggacgtatta
    72601 tcataatctt ggagattata aaggcggaaa cggcaaatat caaggcgtag gatatgaaag
    72661 aaatgctcaa gatttcggta taaaacttag accaaaagat aattttagtt taaactacac
    72721 ttttataaga gatgagatca tagacgattt gcttccgtca aacgctttag aaacgattag
    72781 aaacacgaga tatttaaata atctaaaagt aaaaataggc gaacaagaca actcaaatac
    72841 tctaaattta ggttttagtt acggcgagat caagcgttat agaagtaacg aatacaaacg
    72901 tctaccaaat atggtcaaat tcgatagcaa aacagccact tactcgtttt taggcgagta
    72961 cgcttataaa cttaacgata tgcaaaactt tgtaggcgtg agctacaaat ctaaaaccaa
    73021 agatggatac agacgccttg caaacggaac tataacgggc tggggatttc cggggcttga
    73081 tatagataat tatagagttt ataacacgtt tatctatgag cttagcgagt ctcacgcact
    73141 tagtttggga ttaaattacg actggtttta cagtgacgcg agtaagctaa actccaaagt
    73201 atcaaacggt aaaagtctaa atgacgagta tgagagaatt tacggtgaaa gaatgagaga
    73261 taacgactat agtggactta gcgcaaagtt aaggtatgat tacaaaaata acggatataa
    73321 gtcttatttg caacttgcaa gcttatacgt tgctccatac ttgtataatt cgctaaatgt
    73381 ttataactat atgccaaact catctcctta tttatacaat ataggagcac caaatttaaa
    73441 atcatcaagg cacaacctag ctcagatcag tagcagttat aatgataacg caggctttag
    73501 ctttacttat gatagcatag aagatctcgt gatctacgat aggctacgct caagtgatgc
    73561 aactcttgat ggaacgatca ttagaagaaa tgttaatgct gattatctaa atgcaaaagg
    73621 ttgggtaaag tttgacgtca tcgataatct tagtataaaa tcaagcctga cttatcacta
    73681 tggtcaaaat agatcagacg atagaccgct ttatcaaatt cgccctatag agtttaatac
    73741 aaatttggat tataagcaaa atacgcattt tgggcagtgg agcgtaggtt cggctttaag
    73801 atgggtcgga gctcaaagca gaggcgattg ggataaaagc ataggacttg gaagcgatct
    73861 aaaagatagc gcaaaagctt ttgcgaccgt tgatctgtat agcggaatca acataaaaaa
    73921 cagattcggc gtgagatttg gcatagcaaa tattttcgat gaagactaca gtgagtttat
    73981 aaatccaaat catttagacg tcataactcc gagttttgct ataaaagcac caggtagaac
    74041 tgtttttatg agttttaacg ctagttttta aatttaattt attttaattt tgatgtaaga
    74101 gatatgtgac aacacgtaga taaaatactt taaaatcttt aaaggagaag agatgaaaac
    74161 aaaaatatta agttcgattt tagtagccgg actactttta ggcgttggcg ctacgaatgc
    74221 tttaggcgtt ggcggagcta gcggtccggt cacttataaa tcagtaggaa agataggcgc
    74281 ggtaaaaatg aatccgtata aaatggctcc tcttactgcg gtaattttaa atggcggata
    74341 tgacttgagc gacgctaaag ttacggtaaa agcaaaaggc gaaaaaggta tagatataag
    74401 ctacgacgtt tcaaattcac agcttctaac tcacggtgga attccggtat ttggacttta
    74461 cgcagattat gtaaataaag tagaggtttc atataaaaga aacggtgagg ctatgagcga
    74521 gacttatagc atatacgcgc ctcctgtttt tatgaacgta acaggaacaa atcaaacaag
    74581 cgtacttcct aaagcagaag tagtaaagat ggatcctaaa tttaaagata ggctttattt
    74641 tataaatcat atcgtcagag ccagcactcc tgatagcgga caagcagttt ggaatcatcc
    74701 ggtaggcggc gctatggaat gggataatga gccgtacaac tggatagtgg atgcaaatgg
    74761 tgatgtgaga tggtatatga aagcagacga gataagagat cctgataata tctataaaaa
    74821 aggtaatatg atgggcttta gccaaaccaa agacggctcg cttctttggg gaatgggtca
    74881 aagatatatg aagtatgatc ttttaggaag acaaatttat gatagaaaac ttcctgctgg
    74941 ttatatagat ttttctcacc atatagaaga gatgccaaac ggtcatatac ttatgcgcgt
    75001 tgcaagtagc gatcaaaaaa gaagcgacgg taaaaacgta agaacagtaa gagacgtgat
    75061 catagaagta gatgagagtg gcaacgtaat agatgagtgg aaactttata aaatacttga
    75121 tccttataga gacgtcaata tcttagctct tgatcaaggc gcggtttgct taaacgtaga
    75181 tgcgagcaaa gcaggaacta caaccgataa agaagctctt gaagatccaa atgcggcttt
    75241 tggcgatata gcaggagtcg gcgcaggtag aaactgggct cacgtaaata gtgtaaatta
    75301 cgatccaaac gatgatagca tagtagtttc agtacgtcac caaagtgcgg ttgtaaaaat
    75361 cactcgcgat aaaaaagtaa aatggatact agctccaaaa gcaggctgga acaaagagct
    75421 tgctactaag cttttaactc ctgtagataa gagcggtaaa aagttagatt gtgacgacaa
    75481 cggagtttgc gaaaacagcg attttgactt tatttggact caacataccg cttataaaat
    75541 aaacgaaaaa agtgataaaa gcaagtatgc tctaagtgtg tttgataacg gcgatgcaag
    75601 acataacgaa caaccagcca ttcctactat gaagtatagc cgcgcagtcg agtacgctat
    75661 agatgagaaa aaaatgaccg tcaaacaagt atgggaatac ggtaaagacc gtggatttga
    75721 ctggtacagc ccgataactt cagttgtaga gtatcaaaaa gataaagatt ctatgtttgt
    75781 gtattctgct actgcaggac ttggaaaaat gctacaaaaa ataggaaaaa cagagcctat
    75841 cataaatgag atagattacg gtacgcaaaa agtcggcgta gagatgaaat ttacgaatat
    75901 gggcttaacc ataggctata gagcgcttcc tatcagtacg aaagaagctt ttagcaaata
    75961 gctatttact tacaaaaaac atcttagaag agcttgttca tctaagatgt ttaatctatt
    76021 ttttaaattt ataccttaaa aacatatttt ctacattttt taaatttaaa tatgataaaa
    76081 ttagtataaa ttaaatcaaa aggtcgtttt gtgggtgatt ttttaagtca aatttggggt
    76141 atatctaaac tctatataaa gaacgattat aaaagagtag tttctagcga tgaagctgct
    76201 attttgctct gtgtttcgcc gaaaaattat gatagatact taactcttgt tagttttaaa
    76261 gagatattta aaagacttga gctagatctt aacgagtata gcgttcagct tatgcaaatt
    76321 gcggttttaa acggtatttc tagccttgag atagattttg atagtacaaa aaaatcttta
    76381 gaagagttgg ctaaaaacga tattatatct tttagtgatt ttaaacgcat aacccagttt
    76441 ctagactctt tgagattagc taaaaagcga tctttagata aacaaggctc agcttttcac
    76501 aagaacttag aaacattaaa cgaaatttgt ttagatttga aaaaatacgg ctacaaagag
    76561 cttgaaaaac gcataaattt ggcttacgat agtgcaaata attcgaaatt ttacctagct
    76621 gttaccggag ttataaatgc aggaaagtca agtactctta acgctcttat gaaaaaacag
    76681 ctgcttggcg cttcgaatat tccagaaacc gcaaatttaa gcatcattac atacagtaaa
    76741 gatgagtttg caaaggttgt attttggagc gaagatgagc tgattaaaat gggactggag
    76801 ccaaaaaaac ttatttcaaa aaaagtagat ataggtgagc taaaaaacta tactaccgca
    76861 gcaaacgaga taagcagata tgtaaaagag gtcattttag gtattgattt agatatttta
    76921 aaagacggaa taaatatagt agatactcca ggacttgatg atgccgttgt gcttagagag
    76981 gaacttacaa aagcatatat gcaagagagc gattttactt tgcatcttat gaacgcgtct
    77041 caaagcgcta caaaaaaaga tataagtttt ataataaata ctcttaaaaa cggtaaaagc
    77101 ggcggactta ttatagtgct aactcatatt gataaactta gtaaaaatga tttaaaagag
    77161 gttttaaact acacaaaaaa tagcataaaa acagagctta acgattatgg atttagtgaa
    77221 gagcttgcta gagatacaca gtattttatg gtatcagcgg tgcaaaatga aggtatagac
    77281 gaattaaaaa actatcttta tgagagcttc tttggcccaa attcaaaaaa agcgaccctt
    77341 ataatagata attataaaaa agagctaact catataatta attttataac aaaagatcta
    77401 aaatatcgta atagcgtgat aaacggcgat gctaaagagt tcggccaaaa actcgcttta
    77461 cttgaaaatg agctagaaaa a
//
LOCUS       DAPPKW010000002        70528 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.002, whole genome shotgun sequence.
ACCESSION   DAPPKW010000002 DAPPKW010000000
VERSION     DAPPKW010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 70528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 70528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..70528
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.002"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            108..422
                     /gene="trxA"
                     /locus_tag="RPW04_000070"
     CDS             108..422
                     /gene="trxA"
                     /locus_tag="RPW04_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDX6294208.1"
                     /translation="MGKYIELTSENFNVAKEGVALVDFWAPWCGPCRMLAPVIDELAA
                     EFDGKAKICKVNTDEAQDLAVEYGVRSIPTLLFFKDGQIVDQMIGAQSKIAIADKINS
                     LL"
     gene            540..1484
                     /gene="trxB"
                     /locus_tag="RPW04_000071"
     CDS             540..1484
                     /gene="trxB"
                     /locus_tag="RPW04_000071"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDX6294209.1"
                     /translation="MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQITSSS
                     EMENYPGVATVMDGLSFMTPWTEQCTRFGLKHEMANVQRVSKNSDGSFSIFLEGNKVE
                     TAKAVIVCTGSTPKRAGFKGEDEFFGKGISTCATCDGFFYKNKEVAVLGGGDTALEEA
                     EYLANICSKVYLIHRRDSFRAAPITVEKVKKNPKIELITNARVDEVYGDSVAGVKGVK
                     VKLQDGSVRDLAVPGIFTFVGLDVRNDVLKDENGNFICDTLSTGQVRVNLKMQTNIPG
                     LFAAGDLREDAPKQVVCAAADGATAALSAMSYIESLHY"
     gene            1576..2355
                     /locus_tag="RPW04_000072"
     CDS             1576..2355
                     /locus_tag="RPW04_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002840159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complement resistance protein TraT"
                     /protein_id="HDX6294210.1"
                     /translation="MKILSSKTILGSIAVLLFLTGCATTNLQTSSKMTQSIFIDPVSK
                     DKRLVFVNIKNTSGHDVNLENRIIQGLQSKGYQIVDDPDVATYILSTNVLYCDKKSEN
                     NAAGGAVALGATGAAISGYNSGGAGSMIAAGAAGALVGGVLGKITEDTIWQMQVDINI
                     KQKSKGMVLSSTGSVSGQASVSDSSKSGFLNSFGGNIKNDNASGSLRSNQVDTSSQSY
                     ESDYIEKKTIIFAEATKMGLDLAEATPILEDKIASQIVGLF"
     gene            2550..3314
                     /locus_tag="RPW04_000073"
     CDS             2550..3314
                     /locus_tag="RPW04_000073"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDX6294211.1"
                     /translation="MIRIGIHGASGKMGYEIISNLKNNEQAILSVAYTIEPMPFDVGD
                     AIVTNDLKTLFDNSDVIIDFSIKDGAVNLINYARTNPKPLIIGTTGLGSEGDELIKLA
                     SSVMPILQATNMSLGVAVLNRLTELASRVLDGFDIEIVEMHHRRKVDAPSGTALTLAT
                     HAAKARNLTLDSVRVSGRDGMIGARSKDEIAVMSLRGGDIVGRHTVGFYNDGEFIELN
                     HTATSRATFAKGAIKAAIWIKSKEPKLYSIYDCLGL"
     gene            3316..4656
                     /locus_tag="RPW04_000074"
     CDS             3316..4656
                     /locus_tag="RPW04_000074"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDX6294212.1"
                     /translation="MCAIVGIINSKDAAKTAYYGLFSMQHRGQEASGISASNNHNIKT
                     IKNRGLVTEVFNHDSFEVLKGEMAIGHNRYSTAGSDSVLDAQPVSAKYSLGQISIVHN
                     GNLINKNEVRERLVEDGAIFQSNMDTENILHLIAKSKKEHLQDRIVEAVRQIIGAYCL
                     LILSRSKMFVLRDPYGVRPLSLGRLKDGGYIVASETCAFDLVGATFIRDVKPGEMLIF
                     EEGKSEFKSIQLFGQVDPRICAFEYIYFARPDSVIDGKNVYDIRKKLGETLAKKSNIK
                     ADFVVPVPDSGVPAALGYSQFSKIPFEMAIVRNHYVGRTFIEPTQEMRNLKVKLKLNP
                     MSSVLNGKSVVVIDDSIVRGTTSKKIVELLRHAGVKEIHMKIAAPEIKHPCRYGIDTP
                     SYAELISANMNVEEVRKFIGADSLEFLSIDELTSSLGNERKYSLVSFDGDYFIK"
     gene            complement(4715..5248)
                     /locus_tag="RPW04_000075"
     CDS             complement(4715..5248)
                     /locus_tag="RPW04_000075"
                     /inference="COORDINATES: protein motif:HMM:NF021163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 domain-containing protein"
                     /protein_id="HDX6294213.1"
                     /translation="MGYFTIYHIIALVIIFILFLAFLFLSIKEKKVSVVLSMVLLNIF
                     VMTSVSILAMLIIDEYTKIARIVQLDQNRVLINESIVFTGTIQNTGSHTITNCKFNIR
                     LVNSPVEKGKLDPTIFQTRGFFEIFKRKDTQSSTQNASFTIGHGLKAGETRAFSVSMN
                     YPAHFRSPSVYHTLSCH"
     gene            complement(5248..5781)
                     /locus_tag="RPW04_000076"
     CDS             complement(5248..5781)
                     /locus_tag="RPW04_000076"
                     /inference="COORDINATES: protein motif:HMM:NF021163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2393 domain-containing protein"
                     /protein_id="HDX6294214.1"
                     /translation="MLALDSIKQGIKFYISHFGFIDYFAIIWVLLVFLVVLFLVIILI
                     FKRPGLASILLIADIVFVFLGIFYTHKFIDETLRKREIMISDIKQLNYSDTMIVDLNL
                     TNKSNKAFKYCNVNLKFYKVAPNKFKNYINSLKPFYKKNSVIEDGVNIGQTKNLRLVI
                     NDFRPTDYNTTVTSECF"
     gene            complement(5765..6496)
                     /locus_tag="RPW04_000077"
     CDS             complement(5765..6496)
                     /locus_tag="RPW04_000077"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002951848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HDX6294215.1"
                     /translation="MCVNWDKVAGLLPVSVQEYSSNEVLMMAYMNEAALNLSIETGFA
                     HYFSRTKNRIWKKGEESGNFQIIKFMALDCDNDALLIKVKQIGDNACHTGAKSCFFNE
                     ISANKANLNNNQKTYKYDILDHLYHIALDRKLNRSENSYISKLYQKGENSYLKKICEE
                     AGEFSFAIKDLSKFKKYADLNKESFGEHIDGKPDYDVVYEAADILFHLIVALADFDIH
                     PARVLDELKRREGISGIEEKNARSR"
     gene            complement(6506..7600)
                     /locus_tag="RPW04_000078"
     CDS             complement(6506..7600)
                     /locus_tag="RPW04_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HDX6294216.1"
                     /translation="MPADLNDYFNKKNGNGGGNGGDNKPNFNFKKPNMPSLPSGFGKF
                     SGIIYAIVVIIAVLVIAKPFIIINSGEVGIKSTAGKFDPTPLGPGFHFFVPFVQEVRV
                     VDTKVRIINYTSSEGRNEANYRGSGIETKDTISVLDSRGLPVSMDITVQYRLNPQNAP
                     QTIAAWGFSWESKIIDPVVRNVVRNVTGKYTAEELPERRNDIAVAIDNGIRTDIDSQQ
                     NKPVELLSVQLREIILPPKVKEQIERVQIAKQEAERTKYEVERANQEALKKAALAKGN
                     AEAVKIEAQGRADALKIEANAQAYANKEVAKSLDNNLLQLKQIQTQKEFNEALKVNTD
                     AKIFLTPGGAVPNIWVDTKDKPKQSALEQK"
     gene            complement(7618..8541)
                     /locus_tag="RPW04_000079"
     CDS             complement(7618..8541)
                     /locus_tag="RPW04_000079"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transaminase"
                     /protein_id="HDX6294217.1"
                     /translation="MAIPEAEHIWFDGKLIKWKDATVHVLTHSLHYGNAVFEGVRAYK
                     TPKGLAIFKLKEHTKRLFESAKACGITIPFSQDEINKAHIDLLKSNTYNSNVYIRPLV
                     FLGYGKMGVSHIGCPVNTAIAAWQWGAYMGDDALENGIKVTISSWIKPAPFSMMAKAK
                     ASANYFNSQMANYEAQLSGYDEALLLDPQGFIAEGSGECFFIVKNGAIITPPNDTSLE
                     SITQKTVIDIAKDLGYEVVRQRITRDEAYTADEAFFTGTAAEVTPISNIDGRIIGSGK
                     RGVIATQLQAAYFDVVMGKNAKYEHFVTYIK"
     gene            complement(8624..8884)
                     /locus_tag="RPW04_000080"
     CDS             complement(8624..8884)
                     /locus_tag="RPW04_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDX6294218.1"
                     /translation="MQSEFSNASDEEIAAFYRQLSQNVKHLREQSKISQLELALEIGI
                     KSVAFYSNCENNRYGKHFNIEHIFKISKALNVDIEELFKFKN"
     gene            8974..9231
                     /locus_tag="RPW04_000081"
     CDS             8974..9231
                     /locus_tag="RPW04_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294219.1"
                     /translation="MKFLFCLFVCLSFLNAELYKVYVKRVDSNLYRTSDEIFIETKFC
                     YHYTYGSEAILKYDNYSYDNALIFDYDMTIPSKCDVKRIFK"
     gene            9239..9637
                     /locus_tag="RPW04_000082"
     CDS             9239..9637
                     /locus_tag="RPW04_000082"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294220.1"
                     /translation="MWVIFFILFVIFCVFMIYSQMPDAVKKERTLYDELVDANIELLK
                     STKNPYVGMFAKEEIINLLKTISDEFDKVAVERNEVVSGNQKLFILNEIIFASGMKNK
                     EFGIEHLHYELERYRKYGMREDNQGLIRGN"
     gene            9639..9866
                     /locus_tag="RPW04_000083"
     CDS             9639..9866
                     /locus_tag="RPW04_000083"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294221.1"
                     /translation="MKFVAFALALVIGLALWFFPAGLFLAVFKGATSNGQSVGAIIYM
                     LVLGGVAWALIFIVKKLYKFFLKKFGYKVKE"
     gene            9868..10374
                     /locus_tag="RPW04_000084"
     CDS             9868..10374
                     /locus_tag="RPW04_000084"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294222.1"
                     /translation="MAILWIIAIILSFFTYGISILVALVITFFIYNGKQDDVGEYLLG
                     QYVRYYSTVKGSKNHFWINHANDSEGRIELKKLLNYTYSVAYTHYIYDKSIVGNDQYL
                     RMILNITFSTVYTYCNVFGLENWKIYEVDKYIKDQISLLNLAAKKYGMEDNIHQDDID
                     MLLNKIMK"
     gene            10514..10714
                     /locus_tag="RPW04_000085"
     CDS             10514..10714
                     /locus_tag="RPW04_000085"
                     /inference="COORDINATES: protein motif:HMM:NF013522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HDX6294223.1"
                     /translation="MPIINIKLAGSMPSREKLDEIAVKITDIMVKDLGKNPDRVVINF
                     DEIRPEATYFGAKSVQTIKEGK"
     gene            10790..11275
                     /gene="bcp"
                     /locus_tag="RPW04_000086"
     CDS             10790..11275
                     /gene="bcp"
                     /locus_tag="RPW04_000086"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018137451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HDX6294224.1"
                     /translation="MPEDVERKVTLKAGDIAPSFELENADGVKISLKDFKGKNVVLYF
                     YPKDNTPGCTTEACEFSANYDDFIANDTIIIGISPDSVKSHSNFIEKQSLKHILLSDP
                     EKEIAKAYGVWQVRKNYGKEYLGIVRTTFVIDKTGKIAKVYKSVKAAGHAMKVLADLA
                     K"
     gene            complement(11352..14420)
                     /locus_tag="RPW04_000087"
     CDS             complement(11352..14420)
                     /locus_tag="RPW04_000087"
                     /inference="COORDINATES: protein motif:HMM:NF017197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF748 domain-containing protein"
                     /protein_id="HDX6294225.1"
                     /translation="MKTAKITAYIICLVFLFYTVLGYFAAPKLIMNYVPKIAAQYDAN
                     LSIKNIKLNPFTYEANITGVEFSRKSPIFKFDEININFDPINLITKTIKIANLKISKP
                     EIFIQKEENGEFNFSFLLSQKDTNSSSDAEKTTRFEYEIGELEIINANLNYEDFSNDF
                     KLSLKDMDYKLSNLSTKNGSLGAHSLLASSNLANKIVIDANASLNPLKIDGNIQINEL
                     KTKPIWISFFKNMPLTINSAVVSSDVNYSFNFDNNISIKANAKTDIKDINITQNKNTF
                     IITSLIIPDLNANFINSYNNFDMKMSISNVNIGSFKTKFDEFNANFDKLSLAAIRLGF
                     DQNLDLNLDINDINLKKLNVKKDSSKLSIDTFALNKINLKKDDLKIKNMSIASTSLNL
                     DKQNYLDINGTELSNFNLKNNSLTLENIIINKPNFATFIDESGSKFINNLFSLLPKNS
                     DKKDESKKDEFNYNISNFILNNGYLHLSNEISKNSIKNIELSAKNISNKDSLTLNLNA
                     KDDNLNLKSSAKININKNELGGDINLNLNNLNFAKPYIKRYLNIADLNAKINFNAKIN
                     YTDKLSAKADLNVNNFYIKDDRNEILGSFKTLSQNINLNDKNILISNVKLENPHLKFV
                     VSKQKELNILNLIKNQDSKTSNEEQSDNFKLSLKNLTLKNGSLEFKDDSLALPFDTNI
                     TKISTTINELSNDKISNIALHGVVANYGFSEILVTTLPFDPRSNTDLIVRFKNINLKN
                     ITPYSVKFLGYEIDNGRLSVNLNYKIKNSILSGANSLNFDNLTLGREIPSKDAVSLPL
                     KLAISILKDSNNQIDINLPIWGDLNSPEFSYSGIVIQAIFQLFSDVVTSPFRFIGNVL
                     GINTDEISSVDFAPGTAFLLETNESKIKKLADIAKKKPEIIFTLTPTYSQIPDSYAIA
                     DRSVSKDILLVMNTKDLSYENALKEMFKKKFNNSEFINEKDAKEKLISLVKINQDRIL
                     AIAQKRVENLRKKLMENGVKEGQIEILNIKDVKGQANDKKVSMQINIRTR"
     gene            14525..15592
                     /locus_tag="RPW04_000088"
     CDS             14525..15592
                     /locus_tag="RPW04_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HDX6294226.1"
                     /translation="MLVHICCSVDSHYFLQELKKAYPSQNIIGYFYDPNIHPYSEFLL
                     RYQDVKRSCKKLGVKLICGDYDYESWLKGTKGLENEPEKGKRCEYCFDFRVGKSAQIA
                     VELGCKKITTTLLMSPKKDFTQLENALKNAVIGTNLEPIAVDFRKNGGTTKQFELAKN
                     DKLYHQNYCGCIFGLSAQKRENEIIDELFEPLGGQVQFGSIKSRLKLYKKVRKYEKNG
                     LEFELIREKILNYRLKFAKVCVDGVTLPSYFLFYSHFNRNLVKFKVNENSELLNTNKD
                     DIKLISLAKFNELGGFFYKSVSELMANPPKLKRELKIRKWLCGNFSLSPIIVLDEINI
                     GKFEVRANSVMYTQSIEKLVL"
     gene            16240..16686
                     /gene="fabZ"
                     /locus_tag="RPW04_000089"
     CDS             16240..16686
                     /gene="fabZ"
                     /locus_tag="RPW04_000089"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009649448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDX6294227.1"
                     /translation="MIDVVEIQKILPHRYPFLLIDRVCELETGKSVYAYKNITIAEQI
                     FEGHFPGHPIYPGVMIIEGMAQAGGILAFKSAEDPSGLSIENKVVYFMSIDRAKFRNP
                     VKPGDKLEYRLEVLKHKGNVWVLDGKAYVDDKLVAEAELKAMIVDK"
     gene            16696..17481
                     /gene="lpxA"
                     /locus_tag="RPW04_000090"
     CDS             16696..17481
                     /gene="lpxA"
                     /locus_tag="RPW04_000090"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HDX6294228.1"
                     /translation="MSIHSTAVIEDGAILGEGCIIEPYSFIGSKVVLGDGVTIKQGAR
                     IIGDTKIGSGSKIYSYAIVGDAPQDVSYRPEENTGVIIGKNATIREFCTINSGTHKGD
                     GITRIGDNVFIMAYVHIAHDCILGNNIILANNATLAGHVEIGDFSVVGGLTPIHQFVR
                     IGESCMIAGASALSQDVVPYCLAEGNRAYIRSLNLVGIRRRFDKEVVEEINKAYKFLF
                     RSGGGLKDRAQELLNLNPNEYAKKMCEFIINTTRGIPLEKGKY"
     gene            17481..18701
                     /gene="clpX"
                     /locus_tag="RPW04_000091"
     CDS             17481..18701
                     /gene="clpX"
                     /locus_tag="RPW04_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HDX6294229.1"
                     /translation="MARKCSFCGESEAEDRKLLANETDSAFICEYCIDAGYAAVHGDE
                     SLNSSEKTSKDYKDITPKLLKDVLDSYVIGQEKAKKVFSVGVYNHYKRIFKQDAIEDD
                     TEISKSNILLIGPTGSGKTLMAQTLARFLDVPIAICDATSLTEAGYVGEDVENILTKL
                     LSAAGGDVQRAQQGVVFVDEIDKIARMGENRSITRDVSGEGVQQALLKIIEGSTVNIP
                     PKGGRKHPNQDFIQIDTTNILFVCGGAFDGLNEIIERRIGKNVLGFGQIKRGRDDKQN
                     LISLVEPDDLVHFGLIPELIGRLHAIATLNEITTDDMVKILTEPKNALLKQYQKLFAI
                     DGANLKFDNDAIKEVATQAINRKTGARGLRSIMEDIMMDIMFNLPDLKGYDVIISKDV
                     AIGKAKPLLIKAQN"
     gene            18715..19752
                     /locus_tag="RPW04_000092"
     CDS             18715..19752
                     /locus_tag="RPW04_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HDX6294230.1"
                     /translation="MILDQIIGFFSSDMGIDLGTANTLVLVKDKGIVINEPSVVAVQR
                     EKYGKQKILAVGHDAKEMVGKTPGDIEAIRPMRDGVIADFDMTEKMIRYFIEKTHRRK
                     SFLRPRIIISVPYGLTQVERKAVRESALSAGAREVFLIEEPMAAAIGANLPIREPQGS
                     LVVDIGGGTTEIGVVSLGGLVISKSIRTAGDKIDSSIVNYIKEKYNLLIGERTGEEIK
                     IKVGSATQLPKELSIVVKGRDQVGGLLSRVELTSEDVREAMREPLKEIADALKTVLEM
                     MPPDLAGDIVERGVVLTGGGALIRGLDRYLADIVKLPVYVADEPLLAVAKGTGKALEE
                     IGLLQQLMNEE"
     gene            19742..20494
                     /gene="mreC"
                     /locus_tag="RPW04_000093"
     CDS             19742..20494
                     /gene="mreC"
                     /locus_tag="RPW04_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012662094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDX6294231.1"
                     /translation="MKNKIKFILTIGCLTFVSFYFSDYARRFFVDSTSSSIGFYQNFT
                     GFLKDKITEHFRQAEEIRALRAQNLELERSAALLSAFAYELNNILSDKNSTIYAPEVK
                     LVSALSYVNMGDYNKVWLDFKEFNEDKIYGLIYKGRSAGIVVNKDRKPLGLLQTDPES
                     MFSVFIGENKISGIAKGNNKNIVIKYISQWLNPKVGDEVYTSGLDGIFFGGIPVGKIV
                     EIKEQDLYKSAIVEPDNKIEVPSYLYVVTKEN"
     gene            20494..23748
                     /gene="carB"
                     /locus_tag="RPW04_000094"
     CDS             20494..23748
                     /gene="carB"
                     /locus_tag="RPW04_000094"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009649467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDX6294232.1"
                     /translation="MPKREDVKTILLIGSGPIVIGQACEFDYSGTQAAKTLKELGYRV
                     VLINSNPATIMTDPDFADATYIEPITKESISRIIKKENVDAILPTMGGQVALNVAMEL
                     HEASMLGNVKFLGANPAAIKKGEDRVAFKEAMLKIGMDLPKSMYAYNMEEAMVAAGDI
                     GFPLIIRASYTLGGAGSGVAYNIDEFRDLAEAGIDASPINEILIEESLLGWKEFEMEV
                     IRDKNDNCIIVCSIENFDPMGVHTGDSITVAPALTLTDKEYQHMRDASFKILREIGVD
                     TGGSNVQFAINPKNGRMTVIEMNPRVSRSSALASKATGYPIAKVATMLAVGFTLDEIK
                     NDITGTPASFEPVIDYIVTKIPRFTFEKFPGSNPYLGTAMKSVGEVMAIGTSFKESIQ
                     KALCSLEKDYAGFNFLSLDEEKLIFGLRNAHEKRILYVAQAFRNGKNVDEVYELTKID
                     PWFLNQIYEITEFEKSVDMDILNNKDLLRKAKTWGFSDKMLAQLINEKDNLELSQNDI
                     YYARIKHKINLEYREVDTCGGEFKALTPYLYSSTNITPNLPNLKVENKNKKVLIIGGG
                     PNRIGQGIEFDYCCVHASYALRDLGVTTIMYNCNPETVSTDYDTSDILYFEPIDFEHL
                     RAVIEAEQPDGIIVHFGGQTPLKFSKRLTMIGAKIIGTSARVIDVAEDRKKFSEFISK
                     IGVKQPQNDTATSESEAVQKAAVIGYPVLVRPSYVLGGRAMRRVHSESELKEYMSEAV
                     KVSNHSPVLLDKFLQDATELDVDAISDGKNVYIGAIMEHIEEAGIHSGDSASILPPQN
                     LSKEIINQVEICTKDIALNLGVVGLMNIQFAVYQNELYIIEVNPRASRTVPFVSKATG
                     IPMAKVATRVMWQGNLPEALKFYDQFDVVTKNSSVYKPNIKNIVCVKESVFPFNKLSG
                     ADLILGPEMKSTGEVMGISDSFAKSFVKSQIAAKNSLPSSGKVFISLADADKQRGIEL
                     AKEFVTLGFVVLATGGTYKFLKDAAIECEMVYKISEGRPNIEDKLKNGEVSLAVNTSD
                     NKSSSSDAHKIRQAVLRFKIPYFTNMNAALVAAKSISANEAALEVKSLQEYLEK"
     gene            23745..24584
                     /locus_tag="RPW04_000095"
     CDS             23745..24584
                     /locus_tag="RPW04_000095"
                     /inference="COORDINATES: protein
                     motif:HMM:NF013857.1,HMM:NF014769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294233.1"
                     /translation="MIKFSNSELEELVKSDIPFNDLTTELMEVQAKAKLCIITREDIT
                     LSCLDAVSQICKVRELEFYSNFKNSMQARSGTQILSVIGDFNTLHATYKTIQNLLEYA
                     CGIATSANLMLKSVREISQNCEILVTRKVFPFAKKLCLKAALEGGAKVHRLGLSDTVL
                     FFENHTNAYINLDEFLSDISKFKNRLCERKIIVEASDLEFAKAALKAGSDGVQCDKMS
                     VDEVQNLVEFKNANFPNSIILAAGGINESNAAQYTKTGINAIVTSAVYKGVANLGARI
                     TLL"
     gene            24581..25003
                     /locus_tag="RPW04_000096"
     CDS             24581..25003
                     /locus_tag="RPW04_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002831033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5 YciO YrdC YwlC family protein"
                     /protein_id="HDX6294234.1"
                     /translation="MIYLAQTDTTAGFLSQNLEELNKLKNRPLDQPCLICVSKFEMLK
                     NFTRVPCKFKNLVRRAKKTTFIYPNTKAIRVIKDHPHSKFLDELGWAYSSSANIHGQK
                     FDLQYAKSSCDVIVGEVFSETKPSNIYKLSKCSIKKIR"
     gene            25190..26392
                     /locus_tag="RPW04_000097"
     CDS             25190..26392
                     /locus_tag="RPW04_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004316681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HDX6294235.1"
                     /translation="MAVIEFSTEGIIIDANENFLRTMGYTLDEIKDKHHSMFCLPDVV
                     RSMEYDNFWIDLRAGKSKSGLFRRIAKGGKDIYLEANYIPILDVNGRVYKIIKFANDI
                     TTRHYELMDLKNTIYAANRSMAIIEFRPDGTIINANENFLRTMGYTLDEIKDKHHSML
                     CDSSFSNSKEYVGFWTKLRNGEFQSGKYVRYGKGGKVVYLEASYNPVRNEDGKIYKVI
                     KFATDISEQVIKDQEKLKLISDLADKNDNLTQDGDRVIENTVSNVQNIADMMSQSSTL
                     VASLNQQSDEIKSIIQTISDIADQTNLLALNAAIEAARAGDHGRGFAVVADEVRSLAE
                     RTEHSVSEISTTISSIRDVTSQVVQSIKDGLEDVNQSVELAKEAKDCMQKIRASSAEV
                     ANAMSQGV"
     gene            complement(26419..26667)
                     /locus_tag="RPW04_000098"
     CDS             complement(26419..26667)
                     /locus_tag="RPW04_000098"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294236.1"
                     /translation="MINGKKTRLPKHFRVNHELNWNRKKPISFINSLFGRRKKLKIKS
                     KIFKVKPNDSVAFLQAGKNRVGLIKFGIIEKIVKDDIS"
     gene            complement(26808..27305)
                     /locus_tag="RPW04_000099"
     CDS             complement(26808..27305)
                     /locus_tag="RPW04_000099"
                     /inference="COORDINATES: protein motif:HMM:NF019976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NERD domain-containing protein"
                     /protein_id="HDX6294237.1"
                     /translation="MLNFWQNFKLLANPTKTTPDLSSVAGSLAESEFAIELSKIKRIC
                     VFKNKRIKDCLASLHEIDFIILDGKKIYLIEIKNWSGTVSINENDEWIQINKQKIINH
                     SNPLKKLLRNTTFFVNHLRSSGFDLSGYEIYPQVVFMSSNLKFDSGFKNNIYISKKVE
                     SFYIV"
     gene            complement(27298..27945)
                     /locus_tag="RPW04_000100"
     CDS             complement(27298..27945)
                     /locus_tag="RPW04_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HDX6294238.1"
                     /translation="MQINDRFTRARWLFGDNFEKLSKAKVLVCGCGGVGGVCIDALYR
                     SGVVNLTVIDCDKFDITNQNRQIGSQFVGELKADVFTRLYPGILGLNLKLTKEIVEEF
                     DFSKFDVVIDCIDDVPAKVEIAKKCHKKLLSSMGGAKRLDPTRIQVASIWKTTNDPFA
                     RKIRYELKKAGFKNDYKVVFSTEMPNCKDLGSFIGVTASFGLNLASLCVQKITHA"
     gene            complement(27948..28718)
                     /gene="surE"
                     /locus_tag="RPW04_000101"
     CDS             complement(27948..28718)
                     /gene="surE"
                     /locus_tag="RPW04_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDX6294239.1"
                     /translation="MKEILITNDDGFEALGIRALRNALKDIAKVTVVAPSSEKSACAH
                     SITLTRPLRFIQLDDGFFKLDDATPSDCIYLALETMYKHKKPDLIISGINHGANLGED
                     ITYSGTCGGAMEGTLQGVASMAISLLYKNDSIDKYGFDLACEISADIVKNIFENGFPL
                     NGREFLNLNIPAVPKNEYKGLKIVPAGHQAYNTNAELHRNPRGLEYYWLGTPNIHYLK
                     ENDNECDLAVTFDGYASLTPIKLDMTAHHSINRLKSWI"
     gene            28797..29828
                     /locus_tag="RPW04_000102"
     CDS             28797..29828
                     /locus_tag="RPW04_000102"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HDX6294240.1"
                     /translation="MKILVSCLEASANLHLEEVLKYLGDTEICGIFDKKFGEPLYDSK
                     EFSAMGFVEILPLIFKAKKALKQMVKLAKNCDKVLLIDSPAFNLPLAKAIKEAGLKCK
                     VTYYILPQVWAWKRGRAAKVEKYCDNLASILPFDASFYSRSYYVGHPLLDEIKVQKKE
                     LLNSGVIAFLPGSRKSEITRLMPIYKEVASSLNNKKLLVVPLNLKNDIDEIYGDVSEF
                     QIIFDTHAALLQSEFAFVCSGTATLEAALIGTPFVLCYKAKAIDIWIARKLVKLKHIG
                     LANIMFDFMDKEALNVELIQEQVSKKALLDEYKNCDRSKFLGACGELRSYLKHGSAKI
                     VADMVLSQN"
     gene            29865..30350
                     /gene="greA"
                     /locus_tag="RPW04_000103"
     CDS             29865..30350
                     /gene="greA"
                     /locus_tag="RPW04_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDX6294241.1"
                     /translation="MTEPMTLYGYEKLSSELKDLKLVQRPAIVEEIDIARSHGDLKEN
                     AEYHAAREKQAFIENRIAELSDILSRAKVINPSEYEHDRVKFGSTITIMDVDTELETT
                     YTIVGISESNLERGLISINTPLAKQLIGKSEGDNVTLSLPNGISEIEIVSVCYKPIKF
                     D"
     gene            30359..31387
                     /locus_tag="RPW04_000104"
     CDS             30359..31387
                     /locus_tag="RPW04_000104"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HDX6294242.1"
                     /translation="MKISVGIIGISGYTGLELVKLLINHPNFELVYAGATSQNELEDL
                     FPSLKNVLNLKVEVADTNEVKKRCKLVFLALPHTEGMKVVKELKGSDVKIVDLSADYR
                     VSLENYEKNYCPHLDKSGLKEAVYGLVEINRDLIKTANLIANPGCYPTCSLLALLPFV
                     DMLEPKFGVMIDAKSGLSGAGKSLKSTSHFVSVNENVNAYSPLTHRHSDEIKEHLNKN
                     LKNGLKDDIEIMFVPHLVPLTRGMLVSSFLLLKDEFKDIDPLQILRDFYKNEKFIRIR
                     TEPVNTKFVSGTHFCDIFVINKNGKLWINSSIDNLLRGASSQALANANLMFGFDESLG
                     LPFVGNSI"
     gene            31384..32103
                     /locus_tag="RPW04_000105"
     CDS             31384..32103
                     /locus_tag="RPW04_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018713603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HDX6294243.1"
                     /translation="MKEILDGALFIADAHDNANKKSFLNFLKALKSGAILAPPQLFIM
                     GDMFDFLANTTYSQLFYSEQIELLNELGKDIDIYYFEGNHDFNLKNIFPNLKVFDIYS
                     QPQIFNANGEKISLAHGDIFLKPFETFVLRSLRNKIFLWFMDKIDGFFKFKISKSILK
                     AQENKNLNYKIIDFTFVIGAKIHNYQTSKIIEGHYHQGVNLKIEDKIYINLPCFASEQ
                     RYFIVEYDHEIKFQIVRSPNV"
     gene            32096..33052
                     /locus_tag="RPW04_000106"
     CDS             32096..33052
                     /locus_tag="RPW04_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheV"
                     /protein_id="HDX6294244.1"
                     /translation="MFDDNILKTGSNEMELVDFRIFKQGKDKVYEGIYGVNVAKVKEI
                     IKMPNLTELPGVPDYIEGIFDLRGVVIPVINLAKWMNIAEPRDNILKPRVIIAEFSDI
                     FIGFIVHEAKRIRRISWKDIEPANFAGGAGSGTLDKSKITGVTRIENDEVLLILDLES
                     IVEELGIYQPKIEMEIDEMRQLSGIALVLDDSLTARRLVGDALAKMGLRVVEAKDGSE
                     GIEKMNDLYSLYKDDLDQNLKVIISDIEMPQMDGFHFAASLKEDKRFANIPIIFNSSL
                     SNEFSEIHGKEAGADGYLTKFNATQLYKEVIKVIDAHKKYIS"
     gene            33063..35402
                     /locus_tag="RPW04_000107"
     CDS             33063..35402
                     /locus_tag="RPW04_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDX6294245.1"
                     /translation="MDDMQEILEDFLVEAFELIEQIDHDLVELEANPEDLELLNRIFR
                     VAHTVKGSSSFLNFDILTKLTHHMEDVLNKARHGDLKITPDIMDVVLESVDMMKALLR
                     SIRDNGSDTSAGISIDDICIRLTAISEGEAPQSSQQETNDAPKQEPKEEANTNEPKEE
                     EQVDESANDVDVNSLSEAEVEAEIERLLKVRKAEDQARKEQRKNEHHEDPKPAPKPEP
                     APSKPAASETKNAPAQSSGSAIEQTIRVEVKRLDNLMNLIGELVLGKNRLLKIYDDVE
                     ERYEGEKFLEELNQVVSALSLVTTDIQLAVMKTRMLPIAKVFNKFPRMVRDLSRELGK
                     QIDLEISGEETELDKSIVEEIGDPLVHIIRNSCDHGIEDPKDRAQAGKPEKGVIQLKA
                     YNEGNHIVVEIVDDGKGIDPLSVKMKAVERGIITDREADAMSDKEAFALIFKPGFSLA
                     KQVTNVSGRGVGMDVVKTNIEKLNGIIDIDSEVGKGTIMKLKIPLTLAIIQSLLVGSQ
                     EEYYAIPLASVKETVRVPVDNIYTIEGKNVLRLRDEVLSLVRLSDLFGVKQVFESGDQ
                     TYVVVINVAESKLGIIVDNLIGQEEIVIKSLGNYLQNIRGIAGGTIRGDGKVTLIVDV
                     GMIMDMAKELKIDIRASIESSIKAVSKDKPSDYKVLIVDDSKMDRTIMQKSLEPIGVT
                     VIEATNGVEALNIIKSGDHVIDAVLIDIEMPRMDGYTLAGEIRKYSKYRNLPLIAVTS
                     RTSKSDRLRGVEVGMTEYITKPYSPEYLENVVRKNIKLM"
     gene            35412..35909
                     /locus_tag="RPW04_000108"
     CDS             35412..35909
                     /locus_tag="RPW04_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000070768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-binding chemotaxis protein CheW"
                     /protein_id="HDX6294246.1"
                     /translation="MNDKLGQVLQKQKQQISEPTAKDRDEIEQLVGFIVGEEEFAIPI
                     LYIKEIIKPIEYTRVPSVPDYVLGVFNLRGNVIPLIDLRIKFNLNPSKMTANTRYIVM
                     KDDDNIAGFVIDRLTEAIRINKDRIDQPPETLAKDKGMIQGIGKRDNNILTILKVEAL
                     LKRDF"
     gene            35918..36541
                     /gene="serB"
                     /locus_tag="RPW04_000109"
     CDS             35918..36541
                     /gene="serB"
                     /locus_tag="RPW04_000109"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HDX6294247.1"
                     /translation="MIKLCVFDFDSTLMDGETITILSSAVGKDKEVSDITKRAMAGEL
                     DFYESLVKRVKFIEGLKLQDAIKITSNLPFIDGAGEIISYLKAKDIKIIVFSGGFHIA
                     TDAAQAKLKFDINFANELHHKNSILTGSVGGEMMFGDSKGKMLARLKSFLNLKDDEIV
                     CVGDGANDVSMFKEAGMGIAFCANEILKKAATHIVDTKDLRELKQIL"
     gene            36554..37549
                     /locus_tag="RPW04_000110"
     CDS             36554..37549
                     /locus_tag="RPW04_000110"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDX6294248.1"
                     /translation="MYRDIKFSLWCDFLERDFINGEFLNLIENSVINGATSNPSIFKS
                     AICSSCAYALLKDEYKRKSPKELYEILATTDIKMAANKLLKNYANDDDGFVSLEVDPN
                     LYDDSEGTYKEGKRLFNIIKMPNVMIKVPATDSGYEAMSDLMKKGINVNATLVFSISQ
                     VKECLEAFSEGSRAYAKRFPGTPLPKGVISIFVSRFDRLLDKSLKNAGLETSKFGIYN
                     ATKAYKIIEQQDNKNIRALFASTGVKGDELPADYYIKELLYKNSINTAPLNTIKEFIK
                     DMSEPKSPLECSIIDEYFDRTKKADINYEKSCKILLEDGLKAFCEAFDDILTSLK"
     gene            37559..38755
                     /locus_tag="RPW04_000111"
     CDS             37559..38755
                     /locus_tag="RPW04_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HDX6294249.1"
                     /translation="MTYDVNIDQLDFKLRDELNTYLLELINSSGSDLHVKAEGIIRKR
                     VKGEIVPISNRRVLSSKEAITLAKELLRGRFNELVEKKSVDFTYKFNDDYRFRVNTFF
                     QMDGVSFVFRTIPTKLPTFDELGLPNAVEHMCKEIYRGIILVTGPTGSGKTTTLASMI
                     NYINKNRKSHIITIEDPIEFVYKDENCIINQRSIGQDTTNFADALRGALREDPDIILV
                     GEMRDLETIEIAMHAAETGHLVLSTLHTVDAKDTIGRIISMFPGNEQNRIKLSLASVL
                     KGIISQRLCKRADGSGRVAALEIMLATPRIKNLILENRASDMIYDAIAESSANSGMQT
                     FDTHLLKLFIDGIITKEEALEISSRRNDLEIRIKAAELESSLGKATQNKDNRTIDDLI
                     ALKDIG"
     gene            38816..39352
                     /locus_tag="RPW04_000112"
     CDS             38816..39352
                     /locus_tag="RPW04_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HDX6294250.1"
                     /translation="MLEGIVRESIDKRSTKALRKDGYLIANIYAKGVENINAAFKVND
                     FIKAVKVKSDLKFQVSVGGKTYDVVVVDYQKHPVTSALKHVDLKVVLDDEVSKYMIPV
                     KPFGTPIGFKNKGVLLQSKKRLAVKCKGKDLINSFDVDVSGLDVDDTILVRDIKTVPG
                     VRILDADRVAVLGVIKAK"
     gene            39352..39897
                     /locus_tag="RPW04_000113"
     CDS             39352..39897
                     /locus_tag="RPW04_000113"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDX6294251.1"
                     /translation="MTLVAGLGNIGKEYENTRHNVGFMLIDTMLKDGGFNSVSSGKFQ
                     GELFKKGSLLLLKPSTFMNLSGNSLKAVNDFYKPDNIIVIHDDLDLPFGTVRFKRGGS
                     SGGHNGIKSIDNLIGNDYDRVRIGIGRGNNSVISYVLGEFIDDEKDRLKDVLAHCKNA
                     VLELISCGDITQISSKFTLKA"
     gene            39971..41104
                     /gene="nspC"
                     /locus_tag="RPW04_000114"
     CDS             39971..41104
                     /gene="nspC"
                     /locus_tag="RPW04_000114"
                     /EC_number="4.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxynorspermidine decarboxylase"
                     /protein_id="HDX6294252.1"
                     /translation="MKLNDIKTPAYVCEEAALENNLKILKNISDESGAKVLCALKGFA
                     FSGAMELVSKYLNGATCSGLHEAKYAKYHGFKEIHTYSPAFSDDDIDEVLSISHHVVF
                     NSFAQWNKFRSKSIKSGKSIGLRVNPNTSASPTDMYNPCGEFSRLGITKDNFDFSNLD
                     GVEGLHFHALCEESAKSLEFVLKAFEEQFRTIIPKMKWINFGGGHHITKSGYDINLLI
                     NLIKSFKEKYGTQIFIEPGEAVGWRCGFLISSVLDIVTNGEKTCIIDASAECHMPDTI
                     LMPYRPSIRGENKNGKFAYRFGGATCLAGDIVGAAAGEPIFKFDNEIKVGDKVIFEDQ
                     IHYTIVKNTTFNGVKLPNLVMMNKNGDVKIIRDFGYDEYSRRN"
     gene            41188..41787
                     /gene="yedF"
                     /locus_tag="RPW04_000115"
     CDS             41188..41787
                     /gene="yedF"
                     /locus_tag="RPW04_000115"
                     /inference="COORDINATES: protein motif:HMM:TIGR03527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDX6294253.1"
                     /translation="MQIDCRGLECPKPIIKTRDALNELSIGDKLEIVVNSPASLANVQ
                     KFLSANGLEFNISQNGSEYTVTAVKSCDLTEIDIQNYSCETDFKKHKVLFLKYDKVGS
                     DPIGKGLLTKFLSAISAVQANKRVTHIICVNEAVLMTTNRSHPSFAVLKDLSSLGINV
                     LSCGSCLESFGLVDRLGVGQISNAFEIMSLMLENETVYL"
     gene            41768..42799
                     /gene="selD"
                     /locus_tag="RPW04_000116"
     CDS             41768..42799
                     /gene="selD"
                     /locus_tag="RPW04_000116"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013553277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:41825..41827,aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HDX6294254.1"
                     /translation="MKQFIYNNKNLTKFIKSAGUAAKLDPLGLTQSIGSILEPHSKLL
                     SSINSNEDAGVFLLEDGRAIVQTLDFITPVVDDPFLYGMIAAANSLSDIFAMGAKAIT
                     AMNIVGFDSCHFENEILHEIMAGGKNKIKECGAVLVGGHSIESKETIYGLSVTGSVDS
                     SKFWSNNSAKINDILILTKPLGSGVLTTALKADMLSLDEIREISNLMSQLNFYAVDAL
                     SGLKVNAVTDVTGFGFLGHLSEMLRDDISFDLYKNGIPLLASAKKFANLGFIPEGSYK
                     NSVFTAKICNIKPDILLSDAQTSGGLIISINEDDAYKALSNLKNAGYESSCIVGTVKS
                     KSEYKINLI"
     gene            42809..43435
                     /locus_tag="RPW04_000117"
     CDS             42809..43435
                     /locus_tag="RPW04_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDX6294255.1"
                     /translation="MNFKEALNFRHACKVFDENRKIDSADFNDILEAGRLSPSSMGMQ
                     PWEFEVIEDKELLKKMREACWNQAQITTASKVIVIYAKIDDLRASSNYVKSIICSRKD
                     KSEDEQKAYLQRYANMIEYNEGTSDKELFSWARAQCYLAAQNMMMQAAFLGIDSCPME
                     GFERDKLESVLSINIKQKRVALVLPFGYRKNPASKKQRRDIKDIVKYG"
     gene            43443..44519
                     /gene="flhB"
                     /locus_tag="RPW04_000118"
     CDS             43443..44519
                     /gene="flhB"
                     /locus_tag="RPW04_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002778215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhB"
                     /protein_id="HDX6294256.1"
                     /translation="MVADDQEKTEEPTGKKLEDARNKGNVAKSQDVSGFVTLLVGFAV
                     LVGLMGFMGERLVNLYLYYQGLIGVEITRELFFKITIHSMLQTFLIILPIAICIMIAG
                     IISNIMQFGFLFTVEPIMPNFSKIDPIKGIANLFSLKKLIDAVKIILKVSAVFGVAFY
                     FFLQFVKELPHTIFFSMFNQLLWLKEKMLILAGVMLLLFLIIAIADVFIVRYQYFKGL
                     RMSKQEVKDEFKQMEGDPKVKGRIRQLQMQAARKRMMQNIPTADVVITNPTHYAVALR
                     YDKEKEKAPVVLAKGVDHLALRIRKIATENGIQIVENPPLARELYKLCDIDDQIPGNL
                     FQAVAEVLSFVYLGNRAKFESKLK"
     gene            complement(44565..45737)
                     /gene="nhaA"
                     /locus_tag="RPW04_000119"
     CDS             complement(44565..45737)
                     /gene="nhaA"
                     /locus_tag="RPW04_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDX6294257.1"
                     /translation="MNIIKNFLQKESASGILIILAMILALILANNGVLNKFYSEILRL
                     DSGIIFGEFKLIKPTILWVNDGLMAIFFFFIGLELKYEFLEGELNSISKVALPSIAGI
                     GGVIVPAVIFYVLNHANRFDVNGWAIPTVSDTAFALAVLFLLGSRIPISLKLFLLSLA
                     IIDDVAAIIIIAIFYTKTLSIISLFISFCAIVILTILNYKNNQNIYIYLLCGIVLWVS
                     VLMSGIHATLAGIIASMFIPLRDEDGDPEHGMLQSVMHFLHPIVAFLILPIFAFSNAG
                     VVFSEDSILNLTHPVPLGIIFGLFIGKQIGVFSFAFLAIKCKLAELPNGCGWLHLYGL
                     SILTGVGMSMSLFIDGLAYAESDAFLYANKIAILLASTMCAVTGYFVLRKASKSQN"
     gene            complement(46091..48922)
                     /gene="uvrA"
                     /locus_tag="RPW04_000120"
     CDS             complement(46091..48922)
                     /gene="uvrA"
                     /locus_tag="RPW04_000120"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDX6294258.1"
                     /translation="MNETIKITGAKEHNLKNISLEIPKNRLVVFTGLSGSGKSSLAFD
                     TLYAEGQRRYIESLSSYARQFLDRIGKPDVDHIEGLTPAIAIDQKSTSKNPRSTVGTI
                     TEIYDYLRLLYARIGVQHCHKCGKIVSKMSASDIIDQITKLPDGAKITILAPMVREKK
                     GSFADELEKLANKGYVRAMIDGVMVRLDEEIELSKTKKHTIKVVIDRVVVSKENSSRI
                     ASDVEKALHESFGEVEIDISNASELNLEKSLIHFSEHNACFDCKISFNALEPLSFSFN
                     SPKGACPSCDGLGIRFSLDLNKIIDENLSVEQGAIKVMYGFNKSYFYKFTLAFCEQNG
                     INTKTPYGELNEDEKRLILYGNVKNINFLWKRHKISKTFEGVLKIAYEILKDDKDFSD
                     YMTEKQCEVCNAKRLKQESLAVKVAGKTIGDIIDMSIEDCTKFFSDSSNFTHLNEQQK
                     MIATPILKEINERLFFLYDVGLGYLSLGRDARTISGGEAQRIRIASQIGSGLSGVMYV
                     LDEPSIGLHERDTLKLIKTLRNLQEKGNTVIVVEHDKKTIEAADFIVDIGPGAGVHGG
                     EVVFAGTYEKLLKSNTQTANYINGKKSINYYKGRKQSDYISISSVNLNNISNLNVKFP
                     LRNLVGVTGVSGSGKSSLVLQTLLPTALEELNRAKKVQKIKGVKIEGLEHLDKVIYLD
                     QSPIGRTPRSNPATYTGVMDEIRGLFASTKEAKLRGYKIGRFSFNVKGGRCEKCSGEG
                     EIKVEMHFLPDINVVCDICKGSRYNAQTLEIEYKGKNIAEVLNMSVDEALTFFKAVPK
                     IYAKLKTISDVGLGYVTLGQPATTLSGGEAQRIKLSKELSRSDTGNTLYVLDEPTTGL
                     HFADVDRLVKVLHHLVDLGNSVIVIEHNLDVIKNCDYLIDMGPEGGAGGGKVVAKGTP
                     IEVAKKYKKTGSFTGEFLENELKDMGLLK"
     gene            49159..50817
                     /locus_tag="RPW04_000121"
     CDS             49159..50817
                     /locus_tag="RPW04_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HDX6294259.1"
                     /translation="MANPNIPVDKKTSTVQIIGLFGGILAALLVYYMMPSSAGDIANA
                     AANGKKLNIEGLPIVAAVAVLMGIWWMSEAIALPATALLPMVLFPLLGVDSFKSAAAP
                     YASDTIYLFMGGFVLALAMQKWNLHTRIALGIVLLIGTSPRRLVAGFMVATGFMSMWV
                     SNTATAVMMLPVGLSVLHLVSKLTTGKDDGTVEGDMRHLDEIARKGTQGGIASAVIHK
                     GKDIVEEVKARTSSFTSNFGIALMLGIAYAASIGSLGTIIGTPPNALLVAHMKNEFGV
                     EIGFGQWMIMGVPLAVTMLAICWAILVYWLFPPEIDEIPGGKEIIHEEYKKLGNMSSA
                     EWLVGGVFISAALCWIFLGFILKAYGIKVGSLDTIVAMSVAVLLFIIPANKSGERLID
                     WDSAKKLPWDILILFGGGLALSAQFSKTGLSLWIGHQVSALGTMPILAVIVAVTALVI
                     FLTEITSNTATAAAFLPVIAGVAIGLGYEGSNVMLFTVPVALAATCAFMLPVATPPNA
                     IAYGSGYVRISDMIKAGLWLNIVGIFLITLTVMFLTTTVFGLKI"
     gene            complement(50840..51583)
                     /locus_tag="RPW04_000122"
     CDS             complement(50840..51583)
                     /locus_tag="RPW04_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDX6294260.1"
                     /translation="MSEFLLLSFFGIFVGFASGFFGIGGGGIIVSVLVFLGYDIKYAI
                     GISVMQMIFSSLFGSYINYKKGMFKFGEGFYVGIGGIFGAFLSGFIVKYTPSLWLECM
                     FASLLFIMIIKAFIKKSFASEEKKLSKPILIIIGIFVGIMGVSVGIGGGMLISLIFFG
                     FLGYDIKKAVSMGLFFVVFAGVSGFISLSINGLVDYYHGFALGIGAIIGVYFGTNASI
                     KIDRTKQKRLNLGFNMILFLLTIKKIFLG"
     gene            complement(51605..52333)
                     /locus_tag="RPW04_000123"
     CDS             complement(51605..52333)
                     /locus_tag="RPW04_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDX6294261.1"
                     /translation="MILLPVFGILIGFISGFFGIGGGTVLVPIMLALGYDIKEAIGIS
                     ILQMVLSATFGSFINYKSSNFILKDGFIVGLGGFVGASLSGFVVSNIQERVLEWGLLI
                     ILAISISKFFYVNTAAKPKDPPKYILFIVGFFTGVIAISMGAGGGILLTPILVGFLGM
                     DIKKSVYISLFFVLFSSISGFVSLAFHDLINYKAGLLIAVGSLIGVYFGTKTSHKIDK
                     QAQKWWLVALYISMFGLMVKKIFF"
     gene            52461..52901
                     /locus_tag="RPW04_000124"
     CDS             52461..52901
                     /locus_tag="RPW04_000124"
                     /inference="COORDINATES: protein motif:HMM:NF015581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HDX6294262.1"
                     /translation="MKKILPLASLLVGFAFAGDKMLVTGFSPLGVDETAAKLQNILKE
                     KGLKVFGVFEHSKLAKEVNLEMRDTVVVAFGAPKAGTPLMQCEPSIALELPLKMVIYK
                     DNDSKTVVAYRDIKDIAKSYGANCDEVVNKLSAAQSNFFKAITK"
     gene            53093..54352
                     /locus_tag="RPW04_000125"
     CDS             53093..54352
                     /locus_tag="RPW04_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I family
                     protein"
                     /protein_id="HDX6294263.1"
                     /translation="MLLQEPVVYLREILSSYPNSYLAEDTTQAIIGIDCEYIWGDDLS
                     KLKFAYENGNKICDFAGLFGVMGYDVVYKFENIGDKKESIYEFPTYFYADAKAYLHYD
                     KQSKIYSFYGNDAYFSNLKDAKPHKPEFKNGFYKVNTDLNLEKEHFKNAIKKAKEYIK
                     NGDIFQVVLSEILELESNLKALDFYETLKVKNPSPYMFYFPTLFGVVAGSSPELVMRI
                     KKGEIFAAPIAGTRGRGKDANEDEVLKKNLLSDEKELSEHKMLIDLARNDISKFAKQG
                     SIKVKNPMHVEYFESVMHIVSEVYGQKRDDKSAFDVLSVVFPAGTLSGSPKIRAMQII
                     SELELSSRGIYGGGIGFWHFNGDVQMAILIRSAIFIAKDDEISKVFIGAGAGIVWDSN
                     SENEYSEICKKRRSCVKVFEQSCKEIR"
     gene            54349..55944
                     /gene="trpD"
                     /locus_tag="RPW04_000126"
     CDS             54349..55944
                     /gene="trpD"
                     /locus_tag="RPW04_000126"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HDX6294264.1"
                     /translation="MILMIDNYDSFVYNIYQYILETTDEEIRCVRNDEITIDGINALN
                     PSKIILSPGPKHPKDSGVCLDILSSNLDIPILGICLGHQAIGLSFGADIKRLENPMHG
                     KSSVIKVVNNSGIFKELPNEFNVMRYHSLYVDNIPECLEITAFSDDGIIMGLKHKSKP
                     IYGIQFHPESYFTEYGKKIIENFVNLNKPKTKEKEVVDFAPFMTKLQKGFPLESGDYE
                     VICKEINDKNYDIVQLAGLLVLISEKSLYPDSLAALVKNILKYSITYSDTTPMFDIVG
                     TGGDKLKTINISTTVAFILASMGVKVAKHGNKAITSKSGSSDLLNTLGVSLNSDIGEL
                     RETLNSKNLAFFHAPFFHKITAEVKEVRNRLGIGTVFNMLGPLLNPNLNLTNQIAGNY
                     LEEVNELMARTLLNLGRKHALVVHGMDGMDEITLCDETLIHEVKDGKILEYRITPEQF
                     GFTRAFHADIEGGDAENNAKIFESTIKGELSGARFDIVLINAMFGLYAADFVSSPMDA
                     KPLILEALRSGRVWEFYKDYIGK"
     gene            55941..56546
                     /locus_tag="RPW04_000127"
     CDS             55941..56546
                     /locus_tag="RPW04_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002817473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HDX6294265.1"
                     /translation="MKIKICGIKTLSEAKSVCECELNGVRVDFIGLIFADSKRKVSIE
                     TAKDISNLAHKFGIKVVGVFAGIKFDEITKIVKFADLDAVQIYEKIEDKTKLGCEVWQ
                     VFSVGENLPDLQGSYDKILFDTQGVLKGGNGVKFNWNLLQGLDAKFGLAGGIGVENLR
                     DAMKLKPSFVDINSRIEDENGIKDSDKIMEILKIVSLGDLK"
     gene            56543..57724
                     /gene="trpB"
                     /locus_tag="RPW04_000128"
     CDS             56543..57724
                     /gene="trpB"
                     /locus_tag="RPW04_000128"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDX6294266.1"
                     /translation="MNVKAYFGKYGGQFVPETAMNALLELEEAYESIANTKEFRDELD
                     SLLKDYVGRPSPLYHAKRLSEYYGHEIYLKREDLNHTGAHKINNALAQALLAKKMGKR
                     KVMAETGAGQHGVATATAAALLGLECDVYMGECDTKRQALNVYKMHLLGANVVSITDG
                     LATLKEATTAAIQAWVNEIEARFYVIGSAVGPHPYPKMVRDFQSVIGREAKAQLNEKG
                     VKPDYIIACVGGGSNAIGIFSAFLGDENVKIIGVEAAGLGADTPYHAATLTKGKDGII
                     HGMKTVVLQDEYGRILPVHSISAGLDYPGVGPEHAHLKDIKRVEYYAVSDDECINALK
                     LCTRLEGIIPAIESSHALAYLEKLCPNLKTKSNIVINVSGRGDKDMNTIMEYKKGTIY
                     G"
     gene            57717..58466
                     /locus_tag="RPW04_000129"
     CDS             57717..58466
                     /locus_tag="RPW04_000129"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDX6294267.1"
                     /translation="MDKIQKAFEGKKANIGYIVAGYPNLEYTKEFLNLLDESCLDIIE
                     IGIPYSDPLADGKLISMASFSACQSGVTTDTVFDMLKDVKTDKALVFLVYYNLILAYG
                     EDKFLAKAKEVGISGLIVPDMPHDESSEFRVKTSKFKLCLIPLISPTSSKRTKDILSD
                     ANGFIYAVGSLGVTGGEQSPVDRLKDMIKDIKSSTSLPVAVGFGIKTNEDVKKTKLYA
                     DGAIVGTEIVKLTNKYSPNEINYHIEEIFKK"
     gene            58615..59034
                     /locus_tag="RPW04_000130"
     CDS             58615..59034
                     /locus_tag="RPW04_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HDX6294268.1"
                     /translation="MMSAVCYATKHFCTDTLGFELKDGSKLGKDVYGASIPVYKDNEE
                     YQFFLYFKRDTLKYFAKVLLNVSDEKHVDLGDLSREVANQIIGYAKNLLNDRHDGKYK
                     LGTPEFLGKVESFPVKLAESKLFKMKNRTFKIGYKKA"
     gene            59031..59336
                     /gene="fliN"
                     /locus_tag="RPW04_000131"
     CDS             59031..59336
                     /gene="fliN"
                     /locus_tag="RPW04_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HDX6294269.1"
                     /translation="MSDEELSPNGLFHGYDELLDIGVEFISELGTTSITVKELLKLEV
                     GSVIDLEKPAGESVELYINNRIFGKGEVMVYEKNLAIRINEILDSKSVIQYFKRELL"
     gene            59333..60280
                     /locus_tag="RPW04_000132"
     CDS             59333..60280
                     /locus_tag="RPW04_000132"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294270.1"
                     /translation="MRFIILLFATLPLFGVNLLTYNIYERGDRVDIMLSFDSPYDGSI
                     KQQVAGDKTSLILSDLNVEEQIDKSINSSILQNIFISSPNKLSTLVELKSNLPIAITA
                     SKTPDKFGLRIRVANIKTNQNQAAIPSNIQTKDNTVVSADIDSRYISVIVVLLILFFI
                     SFIIKKRLAKPKNDILFTIGDNIDKKPIQPSEPKEPIKQDINRNSAFSVSDPSPTKTE
                     EIKTPSWELKTDDGGVEVIYEKSIDNTNKVTLLSYENRKYLVLVGSSNVLLDKFGEDK
                     IRDKEDFEVFFEENRQKLGRYLEDRKNSLSSYKDMMSKE"
     gene            complement(60320..60889)
                     /locus_tag="RPW04_000133"
     CDS             complement(60320..60889)
                     /locus_tag="RPW04_000133"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294271.1"
                     /translation="MKKIPFFIIILFSIIGCANSVQNVYVSTSSPLFITDKLSEKKVN
                     IQTRNSEGNLTDIIKFELVKNGYEISDLNNSNIHIKANINYFRKNSSVKPNSNFFIGS
                     NFGMGRHFMSRGIGFSYLHSFDDDYFDTEYFYDSQVSLFINIKNGSSYQTNLNIQSEK
                     SPINFDRDRTILNFNENIAKKIAEILNGY"
     gene            complement(60915..61580)
                     /gene="modB"
                     /locus_tag="RPW04_000134"
     CDS             complement(60915..61580)
                     /gene="modB"
                     /locus_tag="RPW04_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDX6294272.1"
                     /translation="MIDWTPFLLSFKLALISSLILFTFSLPLAYIIARTEFKAKPMVE
                     AVISLPLVLPPSVLGFYMLIFLSPYSFLGKFLEANFDVRLVFNFTGLIIASCVYSLPF
                     MFQPLLAGFKSMPNSLIEASYSLGKSKFKTLIYVAMPNIKPSLLTAFIVSFAHTLGEF
                     GVVLMIGGSIGGETKVASIAIYDAVELLDYDLAHIYSGVMLAISFTVLFLVYYINHKI
                     AKK"
     gene            complement(61577..62428)
                     /locus_tag="RPW04_000135"
     CDS             complement(61577..62428)
                     /locus_tag="RPW04_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6294273.1"
                     /translation="MIDISCQKSLSDSFHLDVNFQIKKGDFVAFYGKSGSGKTTILRI
                     IAGFLKPDNGYIKNGSLVYCDKNYYLEPQKRNIGYLFQDYALFPNMSVIKNLLFANND
                     KKLANELLNLAGLDEHKNSSINALSGGQKQRVALARALMRKPDILLLDEPLSALDNEI
                     RQKLQDYLLKIHENFGMTIILVSHDVGEIYKLANVVYELNNGKMINIGTPSEIFLKPS
                     GSQKFSFHAKILEIQKRDTIYVVIAECANQISEVVLTKNEVLNLKTGDIVTLSAKAFK
                     ISIKGIK"
     gene            complement(62425..62799)
                     /locus_tag="RPW04_000136"
     CDS             complement(62425..62799)
                     /locus_tag="RPW04_000136"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294274.1"
                     /translation="MQAVVREIKIAHQVCEIKFSSQVGELFMLGLELQDDIKIGSKVL
                     LGFKNSDIALSSHKQISTRNNFCVSITNINAGEIISTINLNSNGFIFETVLSSNLINE
                     FKIGEEIWACLNETSLYISEIL"
     gene            complement(62799..63539)
                     /gene="modA"
                     /locus_tag="RPW04_000137"
     CDS             complement(62799..63539)
                     /gene="modA"
                     /locus_tag="RPW04_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDX6294275.1"
                     /translation="MKKLLLIVAFVIVGFASELNVAAAANTTYAFEDIKKEFKKLYPD
                     ANLNVSLGSSGKLVAQIKNGAPFELFMSADMNYANTLYKDGFALNDAVIYAKGKVAML
                     SVRGFDVTKGLEVLKDPKIKTIVIANPKTAPYGAASIEAFKNAGIYDAIKDKIVEAGS
                     IGEALSQTLKAGDIGFVAASAMYSPKMAEYKEGKEFNLVDSKLYTTIDQGIVILKNGE
                     KNKLAKDFYDFILGEKGKEIFAKYGYEF"
     gene            complement(63682..64473)
                     /locus_tag="RPW04_000138"
     CDS             complement(63682..64473)
                     /locus_tag="RPW04_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HDX6294276.1"
                     /translation="MKADVSLELFLNSDTAILEKHIRLLKAIEKTKSITKAAQAEDIS
                     YKNAWDSLDFLNNRSKFPLIVRVNGNRKNSGSELSDYAKKLIKTYEVILKAQKIFLDE
                     ICKNEDINEDIINNLQRMNMKLSARNQLLVEITDIKTGAVNSEITAKLSNGNKLRATI
                     TVESEKDLGLKVGKEVLFIFKAPSVVLGKQDGEKDIKISAANKIKGKVTEAKLGAVNA
                     EITIEINDQQKITAIITNESAQDMRINVGDDILVFIKASNILIGA"
     gene            64637..65350
                     /locus_tag="RPW04_000139"
     CDS             64637..65350
                     /locus_tag="RPW04_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HDX6294277.1"
                     /translation="MRFLMAVLLFFHISWANDIQMDSFEDEFKSPSFIDPLSGYNRAM
                     TNFNDMIYKNIFIPTFKGYDFIIPNEAQMAISNFFDNILYPLRFVNNILQFKFKNAGE
                     ETLRFIANTIVGFGGISDAATNVYGLAKHDEDFGQTLGYWGVGSGFPVVLPIFGQSNL
                     RDMFGLVGDCYASPITYMNVWWAKDSKFINFAAFTFQKVNEGSKDPELYERIIKDAID
                     LYPFIKNTYEQRRDALIKE"
     gene            65353..65952
                     /locus_tag="RPW04_000140"
     CDS             65353..65952
                     /locus_tag="RPW04_000140"
                     /inference="COORDINATES: protein motif:HMM:NF017319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDX6294278.1"
                     /translation="MRKFIFLNLIFFSLGFSLELSQIEPVMREDLKKAVLVMQNKAIS
                     EADKPKKMFELFDGYFDYDLMAKLALSKQYKTLDKEQQIQFKNVFEKKLKQSFTDKLA
                     YYTDQVIEIQSTTMPNKNRFFVNSIIVNEADKYNIVFKFHRASGDNFLIYDVDILGVS
                     IIQTYRSQFEDLSQNVSFDDILKRLEVTSLLDNNETKAK"
     gene            65952..68417
                     /locus_tag="RPW04_000141"
     CDS             65952..68417
                     /locus_tag="RPW04_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RND family transporter"
                     /protein_id="HDX6294279.1"
                     /translation="MKKAFKTVVAFPKTVLTLSIIICLFFGYFTTKLEIDASTQTLLL
                     ENDRELFVYREVSKRYETPNFLVAAYTPNNDLLSDKTLEKIKIISDELEKINGVISVF
                     SILNAPLLQNSNVPLSDLIKHIPNLMDKDINKTAAKNEFLTSALYKNSLVSSDFSTTA
                     IVINLKTNEKYNEYIQKKDFLNLKDKNGTINKYEKQELLNLNKEFKIYRDELREKEHE
                     NIENIKSVLRKYSGDEKLFLGGINMIADDMVGYVKNDLITYGISVLLLLIFCLWLFFR
                     QIRFIIIPVLVCFLSVVSASGIFGFFGYEITVISSNYVALQLIITISVVIHLIVAYRE
                     LYLLHPKYTQIQLIYLTLQSRANPCFFAIFTTVIGFFSLCLSDIKPIIMLGAMMSFGI
                     SVSLIISFVVFGSLLVLLGKKEPKRSFENSFKLTIWCAQAAINYRKTIYLVSFVIVMV
                     GIYGIAQLRVENSFIGYFKQNTEIYRGMEVIDKKLGGTVPLDITIKFKDSSALNSDHQ
                     NDILDDFESEFNAKVGDPEYWFSSYKMDIVKKVTKFLEDRNFIGNVSSLGTLLEVGKN
                     LNGGKELDSLSLAILYNGLPDKYKKVLLTPFVSIEDNEVHFVIRTIDSDENLRRDEFI
                     KSLKKDLEILLANDEVSANVSGVMVLYNNMLQNLFSSQVDTFVFVVLALFIVFVFIFK
                     SIKLSIIGIVSNLVPLCMVFGVMGIANIPLDIMSITIAAISLGIGVDDIIHYIHRYKI
                     EIRTKDKIEAIKSSHASIGYAMYYTSFAVFLGFSVMSFSNFWPTIYFGVLTDLVMVMM
                     LLGALVLLPALILSFHSKTIKKE"
     gene            complement(68390..68964)
                     /locus_tag="RPW04_000142"
                     /pseudo
     CDS             complement(68390..68964)
                     /locus_tag="RPW04_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848534.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
     gene            69093..69190
                     /locus_tag="RPW04_000143"
     tRNA            69093..69190
                     /locus_tag="RPW04_000143"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:69127..69129,aa:Sec,seq:tca)
     gene            69224..>70528
                     /locus_tag="RPW04_000144"
     CDS             69224..>70528
                     /locus_tag="RPW04_000144"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HDX6294280.1"
                     /translation="MFVDKGDVSLSSGLLKRAYLIFILCVGSIVCFLSFIIFVELYKL
                     EDGLKRSNSYHMMRVMSKLETIHSELAYLLEDNISDEEFYETIADNDILDGIFLTDNN
                     FTIIKSYSKFQNDLSSLKLFNYKDHFNKYGFFISKFIYLEPDHPNIFIILPYVNGVNL
                     VGMLDASKLASFALLDDANKYSYMMDSEGFIVLDSIGSNIYDTFNIDYDWKNSQKMHL
                     SVDYSTKQLSFYSVEFNKGLNLAIISKEPFFDIFNSYLVVIAVAIILLVFACLVLIDN
                     IIFLKRNVISPISKLKSLLSGLEIGEIDVNKFKSNKDFDDICYEILNLYTSQVIAKND
                     LRDYKEQYALIFQKSSIKILFVDAKNGQIIEASESAIEFYGYDKDMLLTMNVFDLQAT
                     SLYDYSYSKLADMNDDENIYCSHRLANGDLKIVQIKITPVSSY"
BASE COUNT        23481 a        10643 c        13323 g        23081 t
ORIGIN      
        1 ataaggttaa atttatacaa aacgttagct tttaattcac tattgtcttt taatttaagc
       61 tttttaatgt ataatttgac taaatttatt aaggagatga gaaacaaatg ggtaaatata
      121 tagagcttac ttcagaaaat tttaatgttg ccaaagaagg cgttgcatta gtagattttt
      181 gggctccttg gtgcggacct tgtagaatgt tagctccagt tattgatgag cttgctgctg
      241 agtttgatgg caaggctaaa atttgtaaag ttaatacgga cgaggcacaa gatttagctg
      301 ttgagtatgg cgttcgttcg ataccaacgc tactattttt taaagatggt caaatagtag
      361 atcaaatgat cggcgcgcaa tcaaaaatag caattgctga taaaattaac tcgcttttat
      421 aatccaaatg gggttttacc ccattatctg tctgtatata ttcaatcaaa aatttaaaat
      481 ttatttttat gtgatttatt atttaatttt atagatataa atttatttag gagcaaatta
      541 tgttagatgt agcgataatt ggaggaggtc ctgccggact atccgcaggt ttgtatgcaa
      601 ctcgcggcgg tcttaaaaat gttgtgatgt ttgaaaaagg aatgcccgga ggtcagataa
      661 caagtagttc tgagatggaa aactatcccg gagtcgcgac agttatggat ggtcttagtt
      721 ttatgactcc ttggactgag caatgtacta gatttggttt aaaacatgaa atggcaaatg
      781 ttcaaagagt atcaaaaaac agtgatggaa gttttagtat ttttttagaa ggtaataaag
      841 tagaaaccgc aaaagcagtt atagtttgca ccggttcaac gccaaaaaga gctggattta
      901 aaggagaaga cgagtttttc ggtaagggaa tttctacttg tgcgacttgt gatggatttt
      961 tttataaaaa taaagaagtt gcggttttag gtggcgggga tacagcgctt gaagaggccg
     1021 aatatctagc aaatatctgt tctaaggttt atttgataca tagaagagat agttttagag
     1081 cagctccgat cacggtagaa aaagttaaaa aaaatccaaa aatagagctt ataacaaatg
     1141 cgagagtaga tgaggtttat ggagatagcg tagctggagt aaaaggggta aaagttaagc
     1201 ttcaagatgg ctcagtgcgt gatttggcag tgcctggtat atttactttt gttggtttgg
     1261 atgttagaaa cgatgtttta aaagatgaaa acggcaattt tatatgtgat actttatcaa
     1321 caggtcaagt tagggtaaat ttaaaaatgc aaacaaatat tcccggtctt tttgctgctg
     1381 gagacttaag agaagatgct ccaaaacaag ttgtgtgtgc agctgccgat ggtgctactg
     1441 cagcactttc agctatgagc tatatagaga gccttcatta ttaaagtcag tttttactga
     1501 ctttaataaa ttcatttaag cgatttttat aaactttttt gttattatgc aataaattta
     1561 taaataaggt ttcatatgaa aattttaagt tcaaaaacta tcttaggcag tattgccgtg
     1621 ctgctttttt taacaggttg tgctactacg aatttgcaga ctagctctaa aatgactcaa
     1681 agtatattta tagatccggt ttctaaagac aagagacttg tttttgtcaa tatcaaaaac
     1741 acaagcggtc atgatgtgaa tttggaaaat agaatcatac aaggtttgca gtctaaaggt
     1801 tatcagatag tagatgatcc agacgttgct acatatatac ttagtacaaa tgtattatat
     1861 tgcgataaaa aatcagaaaa taacgctgca ggcggcgctg tagctttagg agccaccgga
     1921 gcagctataa gcggatataa tagcggaggg gccggtagta tgatagctgc tggtgctgct
     1981 ggtgctttgg ttggtggagt tttaggcaag attaccgaag atactatttg gcaaatgcaa
     2041 gtagatataa atataaaaca aaaatcaaaa ggaatggttc ttagctctac aggaagcgtg
     2101 agcggacaag cttcagttag cgattcaagt aaatctggat ttttaaattc gtttggcgga
     2161 aatatcaaaa atgataatgc aagcggttcg ctaagaagta accaagttga cacctctagc
     2221 caaagctatg aaagcgatta tatagagaaa aagacaatta tatttgccga agctactaaa
     2281 atgggattag atttggctga agctactcct atattagaag ataaaattgc ttctcaaatt
     2341 gttggattat tttaattttt aaatttaggc tcaaataagt ttttatttga gcctagtttt
     2401 ttaaatttaa aatatcaaat ttcgaattat attaatatct caaatcttca catttactca
     2461 aatttcaatt tcaaattttc tataacataa ccattttgta attaaaaatt tgataaaatg
     2521 agaaaaaatt caaaccaaaa aggtgtatga tgatacggat aggaattcac ggtgcaagcg
     2581 gtaaaatggg atatgagata atttcaaatt taaaaaacaa tgaacaagca attttaagcg
     2641 ttgcttatac gatagaacct atgccttttg atgtcggtga tgctatcgtt acaaatgatt
     2701 taaaaacact ttttgataat agcgatgtga taattgattt tagtattaaa gatggtgctg
     2761 tcaatttaat aaactatgca agaacaaacc caaaaccttt gatcataggt acaaccggtc
     2821 tgggaagcga aggtgatgag ctcataaaac ttgctagctc tgttatgcct atacttcaag
     2881 ctacaaatat gagtttaggc gtagcagtgt taaatagact tactgaactt gcaagtagag
     2941 ttttagatgg atttgatata gagatagtcg agatgcatca tcgccgtaaa gtagatgccc
     3001 caagcggcac ggctcttaca ctagcaacgc atgccgcaaa agctagaaac ttgactttag
     3061 atagcgtaag agttagcggt agagacggga tgataggagc tagaagcaaa gacgagatag
     3121 ctgttatgtc tctaagaggc ggcgatatag tcggtcgtca tactgtagga ttttataatg
     3181 atggagagtt tatcgaactc aatcacactg ctacatctag agctacattt gcaaaaggcg
     3241 ctataaaagc tgccatttgg ataaaatcaa aagagcctaa gctttactct atttatgatt
     3301 gtttaggact ataaaatgtg tgcgatagta ggaattataa attcaaaaga tgccgctaag
     3361 actgcttatt acggtctatt ttctatgcag catcgcggtc aagaagcaag cggaatcagc
     3421 gctagcaata atcacaatat caaaaccatt aaaaatcgcg gtttagtaac agaagttttt
     3481 aatcatgata gttttgaagt tttaaaaggt gaaatggcaa taggtcacaa tcgttattca
     3541 accgcaggaa gcgatagcgt tttggatgct cagccagtta gcgcaaaata ctctttgggt
     3601 cagattagca tagtgcataa cggaaatttg ataaataaaa atgaagttag agagaggctt
     3661 gtcgaggacg gtgcgatatt tcagtcaaat atggatacgg aaaatattct tcatcttatt
     3721 gcaaaaagca aaaaagagca tctgcaagat cgcatagttg aagccgttcg tcagattata
     3781 ggagcgtatt gtcttcttat actgagtcgt tcaaagatgt ttgttttgcg cgatccttac
     3841 ggcgtacgac cacttagtct tgggagatta aaagatggcg gatatatcgt agctagcgag
     3901 acttgtgcgt ttgatcttgt aggagcaact tttataagag acgtgaagcc aggagagatg
     3961 cttatatttg aagagggtaa aagcgagttt aaaagtatcc agctttttgg acaagtcgat
     4021 cctagaattt gcgcttttga gtatatatat tttgctagac cagatagtgt catagacggt
     4081 aaaaatgtat atgatataag aaaaaaactc ggcgagactt tggctaaaaa atcaaatatc
     4141 aaagctgatt ttgtagttcc ggtgccagat tctggagttc ccgcggcgct tggatattct
     4201 cagtttagca aaataccgtt tgagatggct atagtgagaa atcactatgt gggtcgtaca
     4261 tttatagaac ctactcaaga gatgagaaat ttaaaagtta agctgaaatt aaaccctatg
     4321 agttctgttt taaatgggaa aagcgttgtt gttatcgatg atagtatagt aagaggaact
     4381 actagtaaaa aaattgttga gcttttaagg catgccggag taaaagagat tcatatgaaa
     4441 atagctgctc cagaaatcaa acatccttgt agatacggta tcgatacgcc aagttacgct
     4501 gagcttataa gtgcaaatat gaacgtagaa gaggtgcgta agtttatagg cgctgatagt
     4561 cttgagtttc ttagtatcga tgagcttact agcagccttg gcaatgagcg aaaatattct
     4621 ctcgtgagct ttgatggtga ttattttata aaataaattt atttaaaacc agagtttcaa
     4681 agcctggttt tatgtgattt tatcttgctg attatcagtg gcaagataaa gtatgatata
     4741 cacttggact tctaaaatgc gccggataat tcatagaaac gctaaatgct ctagtttcac
     4801 ctgcttttaa accatgtccg attgtgaagc tagcattttg tgtgctggat tgagtatctt
     4861 ttcttttaaa tatttcaaaa aatcctcttg tttgaaatat agtaggatca agctttcctt
     4921 tttcaacagg agaattaaca agtcttatat taaatttgca attagtgatc gtatgtgaac
     4981 ccgtgttttg gatagtgccc gtaaatacta tactttcatt gatgagtact ctgttttggt
     5041 ctaattggac tattctggct atttttgtat attcgtctat tataagcatt gcaagtatgc
     5101 taacagaggt catgacaaat atatttagca gcaccatact tagcactact gaaacctttt
     5161 tttcttttat ggacagaaat aaaaaagcta aaaatagtat aaatataatc actagtgcga
     5221 ttatgtgata aatagtaaaa taacccatca aaaacactcc gaagtcacag ttgtattata
     5281 atcagtcggt ctaaagtcat ttatgacaag ccttaagttt ttggtttgac ctatatttac
     5341 tccatcttct atcacgctat tttttttgta aaatggctta agagaattta tgtagttttt
     5401 aaatttatta ggcgctactt tgtaaaactt caaatttaca ttgcaatatt taaacgcttt
     5461 atttgacttg ttagtcaaat tcagatcgac tatcattgta tctgagtagt ttagctgttt
     5521 tatatcactt atcataatct ctctctttct taaagtttca tctataaatt tatgcgtata
     5581 gaatatacca agaaatacaa atactatatc ggctataagt aggattgagg caagacctgg
     5641 gcgcttaaaa atgagtatta taacaagaaa aagcaccact aaaaacacta ataaaaccca
     5701 aattatcgca aaataatcga taaaaccgaa atgcgatata taaaatttaa taccttgttt
     5761 tatgctatct agagcgagca tttttctcct caataccgct tattccttcg cgtcttttca
     5821 gctcatctaa aactctagcc ggatgtatat caaaatcagc taaagcgact ataagatgaa
     5881 ataaaatatc tgctgcttca tatactacgt cgtaatctgg tttgccatct atatgttcgc
     5941 cgaaactctc tttgtttaga tctgcatatt ttttaaattt agaaagatct ttgatagcaa
     6001 aactgaactc tccggcttcc tcgcatattt tttttaagta actattttca cctttttgat
     6061 atagtttaga tatatacgag ttctcgctcc tatttaattt tctatcaaga gctatatgat
     6121 aaagatgatc taaaatatcg tatttatagg ttttttgatt gttatttaaa tttgctttgt
     6181 tggctgaaat ttcattaaaa aaacaagatt ttgctccggt atgacaagca ttgtcgccta
     6241 tttgtttgac tttaataaga agcgcgtcgt tatcgcaatc aagagccata aatttaataa
     6301 tctgaaaatt tccgctctct tcaccttttt tccagattct attttttgtg cgtgaaaagt
     6361 agtgagcaaa accagtttct atactaagat taagtgctgc ttcattcata taagccatca
     6421 taagaacttc atttgagcta tactcttgta cacttactgg taaaagtcca gctactttat
     6481 cccaattcac acacatattt tatccttact tttgctctag agcgctttgc ttgggtttgt
     6541 cttttgtatc cacccagata tttggtacgg ctcctcctgg agttaaaaat atcttagcat
     6601 cggtatttac ttttaatgct tcattaaact ctttttgggt ttgaatttgt tttagttgca
     6661 gtaagttatt atctaaactt tttgctactt ctttgtttgc gtatgcttga gcgtttgctt
     6721 ctatttttaa agcgtcggct ctaccttgag cttctatttt tacggcttct gcgttacctt
     6781 ttgcaagagc tgctttttta agagcttctt gattcgctcg ttctacttcg tattttgttc
     6841 tttcggcttc ttgttttgct atttgaactc gttcgatttg ctcttttact tttggcggaa
     6901 gtattatctc gcgaagttgt acacttaaaa gctctaccgg tttattttgt tggctatcga
     6961 tatctgttct tataccatta tctatagcta ctgctatatc attacgacgc tcaggaagct
     7021 cttcggcggt gtacttacca gttacgtttc taacaacgtt tctaacaact ggatcaatta
     7081 tcttactttc ccagctaaat ccccatgcgg ctatagtttg aggagcattt tgcggattta
     7141 gtctgtactg aacggtgata tccatgctga ctggaagacc gcgagaatca agaaccgata
     7201 tagtatcttt tgtttctata ccgctaccac ggtaatttgc ttcgtttctg ccttcgcttg
     7261 aagtatagtt tatgatacga actttagtat ctactactct tacttcttgt acaaaaggta
     7321 caaagaaatg aaatcctgga ccaagaggtg tcggatcgaa tttacccgct gttgatttga
     7381 tacccacctc acctgaattt attattataa atggttttgc tatgactaaa acagctatga
     7441 taacgacgat agcgtaaatt ataccgctaa atttaccaaa gccgctagga aggctcggca
     7501 tatttggttt tttaaagttg aaattcggct tattatctcc gccgtttccg cctccattac
     7561 cgtttttctt gttgaaataa tcatttaaat ctgctggcaa gtttattcct tttaaattta
     7621 ttttatatat gttacaaaat gctcgtattt tgcattttta cccattacta catcaaaata
     7681 tgcggcttga agctgtgtgg ctataacgcc cctttttcct gagccgataa tcctaccgtc
     7741 gatgttgctt ataggcgtta cttccgcggc tgttcctgta aaaaatgcct catctgccgt
     7801 atatgcttca tctcttgtga ttctttgacg gaccacttcg tagcctagat cttttgcgat
     7861 atctataacc gttttttgag ttatactttc taaactcgtg tcatttggag gagtaatgat
     7921 cgcgccgttt tttactatga aaaagcactc tccgcttcct tcagctataa atccttgagg
     7981 atcaagaagc aaagcttcat cgtatccaga taattgcgct tcgtagttcg ccatttgaga
     8041 gttgaagtaa ttcgcgcttg cttttgcttt tgccatcata gaaaacggtg ccggttttat
     8101 ccaagatgag atcgttactt ttatcccgtt ttcaagagca tcatcgccca tgtaagctcc
     8161 ccattgccat gcggctatag ccgtatttac tgggcagccg atgtggctaa ctcccatttt
     8221 tccgtaccct aaaaatacaa gtggacggat ataaacgttg ctgttataag tgttgctttt
     8281 tagtaaatct atatgcgctt tatttatctc atcttgtgaa aatgggatag taatcccgca
     8341 ggcttttgct gattcaaaaa gtctttttgt atgttctttt agtttaaata tagctaagcc
     8401 ttttggtgtc ttataagccc taactccctc aaaaacagca tttccataat gaagtgaatg
     8461 agttaaaaca tgaaccgtgg catctttcca cttgattagt ttcccatcaa accatatatg
     8521 ctctgcttct ggtattgcca ttttgttgcc tttcgtggtt ataaaatttg cctgatttta
     8581 tccaaaattt gattaatatc ttttgaatat tactaaattt agcttaattt ttaaatttaa
     8641 atagttcttc tatatccaca tttaaggctt ttgaaatttt aaaaatatgt tcgatgttga
     8701 agtgttttcc atagcgatta ttttcacaat tggagtaaaa tgcgactgat ttgataccta
     8761 tttctaaagc taattcaagc tgagaaattt tactttgttc tcttaagtgt tttacgtttt
     8821 gtgataattg tctgtaaaaa gcagcgattt cctcgtcact tgcattgcta aattcactct
     8881 gcatatttat cctatgggat taattttctt ttaaatttat accgatacaa ttatattttc
     8941 tatatcctat gggataaatt taaggagggt tgtatgaaat ttttattttg tctatttgtt
     9001 tgtctttcat ttcttaatgc agagttgtat aaagtttatg taaaaagagt tgatagtaat
     9061 ttatacagaa catctgatga gatatttatc gaaacaaaat tttgttatca ctacacatat
     9121 ggaagcgaag caattttgaa atatgataat tattcttatg ataatgcttt gatttttgat
     9181 tacgatatga caattccaag taaatgtgat gtaaagagaa tatttaagta ggttaatgat
     9241 gtgggtaata ttttttattt tatttgttat attttgtgtt tttatgattt attctcaaat
     9301 gccagatgct gtaaaaaaag agcgaacttt atacgatgag ctggtggatg caaatataga
     9361 gcttttaaaa tctacaaaaa atccttatgt aggtatgttt gcaaaagagg aaatcataaa
     9421 tttgcttaaa actatatcag atgaatttga taaagtagca gttgagagaa atgaagtagt
     9481 aagtggaaat caaaagctat ttatactaaa tgaaattata tttgccagtg gaatgaaaaa
     9541 taaggaattt ggtatagagc atttgcatta tgagcttgaa agataccgta aatacggaat
     9601 gagagaagat aatcaaggtt taataagggg gaattagaat gaaatttgtt gcatttgctt
     9661 tggctttagt gattggatta gccttatggt ttttccctgc tggattattt ttggcagttt
     9721 ttaaaggtgc tacatcaaac ggacaaagcg taggagcgat aatctacatg ctggtattgg
     9781 gcggtgttgc ttgggctttg atttttatcg taaaaaaact ttacaaattt ttcttgaaaa
     9841 aatttggata taaagtaaag gaataaaatg gctattttat ggattattgc tataatatta
     9901 agttttttca catatggaat ttctatttta gtcgctttag tgataacatt ttttatatat
     9961 aatggtaaac aagatgatgt tggcgaatat ttattgggtc agtatgttag atattattca
    10021 actgttaaag gttctaaaaa tcatttttgg ataaatcatg ctaacgattc agaaggtaga
    10081 atagaattaa aaaaattgct taattataca tattctgtag cttatacgca ttacatatat
    10141 gataaaagta tagttggtaa cgaccagtat ttacgtatga ttttaaatat aactttttca
    10201 actgtttaca catattgtaa tgtatttggt cttgaaaatt ggaaaatata cgaagtggat
    10261 aaatacataa aagatcaaat atcattgcta aatttggcgg caaaaaagta tggtatggaa
    10321 gacaatattc atcaagatga tattgatatg ttgcttaata aaattatgaa ataataatct
    10381 aggcagtatg ctaaaaaatt gattaatatc ttttgaatgg cagtaaattt gtggagtaaa
    10441 tttgagagat atgaataatt tgattaattt aaattcgcta taatcacgca ttaaatttaa
    10501 ataaggaaat aaaatgccta ttataaatat aaaattagca ggttccatgc caagccgtga
    10561 aaaactagat gaaatcgcag tcaaaatcac ggatataatg gtaaaagatt taggaaaaaa
    10621 tccagataga gtcgtgataa atttcgatga aattcgccct gaagcgacgt attttggtgc
    10681 aaaatctgtt caaactataa aagagggtaa ataaatggcg tgcaacgata aaaaagagtc
    10741 aaatttatgc gctcctaaaa caaaagaatc agctcaaact acagtttttt tgcctgaaga
    10801 cgttgagaga aaagttacat taaaggccgg cgatatcgct ccaagctttg agctagaaaa
    10861 cgcagatgga gttaaaatct cactcaaaga ctttaaaggt aaaaacgtag ttttatactt
    10921 ttatccaaaa gacaacacgc ctggttgtac gactgaagcg tgcgagttta gcgcaaatta
    10981 cgatgatttc atagcaaacg atactatcat tataggtatc agtccagaca gcgtaaaatc
    11041 acactcgaat ttcatagaaa aacagagtct taaacatata cttttaagcg acccggaaaa
    11101 agaaatagca aaagcttatg gcgtatggca agtacgtaaa aactacggta aagagtatct
    11161 tggtatagtg cgaacgactt ttgttataga taagacagga aaaatcgcaa aagtgtataa
    11221 aagcgtaaaa gccgcaggtc acgctatgaa agttttagct gatttggcaa agtaaattta
    11281 aaaagcaacg ctttgcataa tcttaatata tttttatatg caaggtcggt gctttttgct
    11341 atttttatca attatcttgt tcttatattt atctgcattg agactttttt atcgtttgct
    11401 tgacctttta cgtctttgat atttaaaatc tctatttgac cttctttaac tccgttttcc
    11461 atcaattttt tacgtagatt ttctactctt ttttgcgcta tggctagtat cctgtcttgg
    11521 ttgattttta ctagagatat aagcttttct ttcgcatctt tttcatttat aaattcagaa
    11581 ttattaaatt ttttcttaaa catctctttt agtgcatttt catagcttag atcttttgtg
    11641 ttcataacaa gaagtatatc tttagatacg cttctatctg ctatagcgta ggaatctggt
    11701 atttgagaat aagtcggcgt gagagtaaat atgatttctg gttttttctt cgcgatatct
    11761 gctagttttt ttatctttga ttcatttgtt tctagtaaaa acgccgttcc tggagcaaaa
    11821 tcaacactac tgatctcatc tgtatttata ccaagaacat ttcctataaa tctaaatgga
    11881 gaagtgacga cgtcactgaa aagttggaaa atagcttgaa taacgatacc tgagtagcta
    11941 aactccggac tgttcaaatc gccccatata ggaagattta tatcaatttg attattgcta
    12001 tcttttagta tagaaatcgc aagctttaaa ggaagactta ccgcgtcttt gctaggaatt
    12061 tcgcgtccta gagttaggtt atcgaaattt agtgagtttg cgccgcttaa tatagagttt
    12121 tttattttgt aatttaaatt tacacttagt ctaccattat caatctcata tcctaaaaat
    12181 tttaccgaat acggagttat attttttaaa tttatatttt taaaacgtac gataagatcc
    12241 gtgttagatc ttggatcaaa tggcaaagta gtaactaaaa tctcgctaaa tccatagttt
    12301 gccacaactc cgtgaagcgc gatattgctt attttgtcat ttgataactc gtttatcgtg
    12361 gtagatattt tagttatatt tgtatcaaaa ggaagagcca aactgtcatc tttaaattcc
    12421 aaactaccat tttttaacgt taaatttttt agacttagtt tgaagttatc gctttgttct
    12481 tcattgctag ttttgctatc ttgatttttt attaaattta aaatatttaa ctctttttgt
    12541 tttgaaacta caaattttaa atgtggattt tcaagcttta catttgatat caagatattt
    12601 ttatcgttca aatttatatt ttggctaaga gttttaaaag aacctaatat ctcgtttcta
    12661 tcatctttta tatagaagtt atttacgttt aaatcggctt ttgcgcttag tttatcggta
    12721 taatttatct ttgcattgaa atttatcttt gcatttaaat ccgcgatgtt tagataccgt
    12781 tttatgtatg gttttgcgaa gtttagattg tttaaattta agtttatatc tccgcctaat
    12841 tcgtttttat ttatatttat ctttgcgctg ctttttaaat ttaaattatc atcttttgca
    12901 tttaaattca gtgttagact gtctttattt gagatatttt tggcactcag ttctatattt
    12961 tttatgctgt ttttgctgat ttcgttgcta agatgcaagt atccgttatt taggatgaaa
    13021 tttgaaatat tatagttaaa ctcatctttt ttggattcat cttttttatc gctgttttta
    13081 gggagcaagg agaataaatt gtttatgaac ttagatccgc tctcgtcgat gaaagtcgca
    13141 aaatttggct tatttataat tatattttct agtgttagac tgttgttttt taaattgaaa
    13201 ttactaagct cggttccatt tatatccagg taattttgct tatctaagtt taagctcgta
    13261 cttgcaatcg acatattttt tatttttaaa tcatcttttt ttaagtttat tttatttaat
    13321 gcgaatgtgt ctatgcttag ctttgaacta tcttttttga catttaattt ttttaaattt
    13381 atatcattta tatctaaatt taaatccaag ttttgatcaa aacctaacct aattgcagcc
    13441 aaactcaact tatcaaaatt agcattaaat tcatcaaatt tagttttaaa actgcctata
    13501 tttacatttg atatagacat tttcatatca aaattattat agctatttat gaaatttgcg
    13561 tttaaatccg gtatgattaa gctagttatt ataaaagtat ttttattttg agttatattt
    13621 atatctttga tatctgtttt tgcgtttgct tttatgctga tattgttatc aaaattaaaa
    13681 ctataattta catcagagct cacaaccgcg ctatttatag ttagcggcat attcttgaaa
    13741 aacgatatcc aaatcggctt cgtttttagc tcgtttatct gtatatttcc atctattttg
    13801 agtggattta aactagcatt tgcatctata actattttat ttgctagatt tgagctagct
    13861 agcaaagagt gtgctccaag acttccattt ttagtagata aatttgaaag tttataatcc
    13921 atgtctttta aactaagttt aaaatcattg ctaaaatctt catagtttaa gtttgcgttt
    13981 attatctcga gttcgcctat ttcatactcg aatcgggttg ttttttcggc atctgaacta
    14041 ctatttgtat ctttttggct tagtaaaaat gagaaattaa actcaccgtt ttcttctttt
    14101 tggataaaaa tttcaggttt agaaattttt aaatttgcga tttttatggt ttttgttatc
    14161 aaatttatag gatcgaaatt tatatttatt tcgtcaaatt taaatatagg agatttacgg
    14221 ctaaactcca ctccagtaat gtttgcttcg tatgtaaaag ggtttaattt tatatttttt
    14281 atgcttaaat tcgcatcata ttgcgcggca atttttggca cataattcat aatgagtttt
    14341 ggagctgcaa aatatcccaa aacagtataa aacagaaata caagacagat tatataagca
    14401 gttatcttag cagttttcat aatgactcct tttatattat tatataaaaa attatctatt
    14461 taagtaataa aatttactaa aaattcacta ttattttgat aatataaaaa taaaaggtca
    14521 aattttgcta gttcatatct gctgcagtgt tgatagtcac tactttttac aagagcttaa
    14581 aaaagcctat cctagccaaa acatcatagg ctacttttat gatccaaata tccatccgta
    14641 tagtgagttt ttgttgcgtt atcaagacgt aaaaagaagt tgtaaaaagc taggtgttaa
    14701 acttatttgt ggagattacg attacgagag ttggcttaag ggcacaaaag gtcttgaaaa
    14761 tgagcctgaa aaaggaaaaa ggtgcgagta ttgttttgat tttcgtgtgg gaaaatcggc
    14821 gcaaatagca gttgagttag gatgtaaaaa gataactaca acgcttttaa tgagccccaa
    14881 aaaggatttt actcagttag aaaatgcatt aaaaaatgca gttattggta caaacttaga
    14941 gcctatagct gtggattttc gcaaaaatgg cggcactaca aagcagtttg aactagctaa
    15001 aaacgataaa ttgtatcatc aaaattactg cggttgcatt tttggattga gtgcacaaaa
    15061 aagagaaaat gaaatcatag atgaactttt tgaacctctt ggtggacaag ttcagtttgg
    15121 atctataaaa agtcgtttaa agctatataa aaaagtaaga aaatatgaaa aaaatggttt
    15181 ggaatttgag ctgataagag aaaaaatctt aaattatcgc ttaaaatttg caaaagtttg
    15241 cgttgatggc gtaactttgc ctagttattt tcttttttat tcgcatttta ataggaattt
    15301 agttaaattt aaagtaaatg agaactcaga gcttttaaat acaaataaag acgatataaa
    15361 gcttattagt cttgctaaat ttaacgagct tggcggattt ttttataaga gcgtttcgga
    15421 gcttatggca aatccgccga agctaaagcg cgagttaaaa attcgcaaat ggctttgtgg
    15481 taatttttct ctttctccta tcatcgtgct tgatgagata aatatcggca aattcgaggt
    15541 tagagcaaat agcgttatgt atacgcaaag catagaaaag cttgttctgt agattttgcg
    15601 cacttttttt gaggcgcaaa tctatatctt taacaagcta aatatttaaa ttatctctct
    15661 aaaatcagct taaatttaca atgcgcaaca gtaatagaaa gtaaccttaa aaattaaagt
    15721 taaatgaagt ttaaatttga ttaaatatat tttacgaatt tcaaaaagga gagagtacga
    15781 aaaaaaatca tttttggttt ggtgatcgta gcttcagcaa tgattttgat ggtgggcttg
    15841 aagcttatct aagcgaaaat tatgcaaaag cgcaagataa aattatttca aattcaaaga
    15901 gctacagtag agtttacgat ataggaaact gacgatataa gaaatcagtt tggctgcgaa
    15961 attacgctag gctaaatgtg ctggctacta accaaaggcg aagcggcaaa tacggtatct
    16021 atggatatat cattatttat ttaaatttaa gatagaatat ttctccaaat tgcttgcttg
    16081 attctgcaaa gtttaaaaaa atattaaatt tattaagcac gcttatatat aattaaaatt
    16141 aaacgacaaa caaattttga tttttttatt tcgttttatc taactatttg ctaatttttg
    16201 ctaaaatttg gagtttatat caacgtaagg gcaaaattta tgatagacgt agtagaaatt
    16261 caaaaaattt taccacatag gtatccgttt ttgttaatag acagagtttg tgaattagaa
    16321 acgggtaaaa gtgtttatgc gtataaaaat ataactatcg cagaacaaat ttttgaagga
    16381 cattttcctg ggcatccgat atatccaggt gttatgataa tagaaggaat ggctcaagca
    16441 ggtggtattt tggcatttaa aagtgcagaa gatccaagcg gtttgagcat agaaaataaa
    16501 gtcgtatatt ttatgagtat cgatagagct aaatttagaa atcctgtaaa gccaggagat
    16561 aagttagagt atcgtttaga ggtattaaaa cataaaggaa atgtttgggt tttagacggg
    16621 aaagcttacg tggacgataa attggtagct gaggctgagc taaaagctat gatagttgat
    16681 aagtagcggc gcgatatgag tattcattca acagcggtta tagaagacgg cgctatttta
    16741 ggcgaaggct gcattataga accatactcc tttataggct ccaaagttgt tttaggagac
    16801 ggcgttacta taaagcaagg cgctaggatc ataggcgata cgaaaattgg cagcggaagc
    16861 aaaatttata gttatgctat agtaggagac gccccacaag acgttagtta ccgtccagaa
    16921 gaaaatacag gtgttataat aggcaaaaat gctactatac gcgagttttg tactataaac
    16981 tcaggtacgc ataaaggcga tggaattact cgtataggag ataatgtttt tataatggcg
    17041 tatgtgcata tcgcacatga ttgcatactt gggaataata ttatattagc aaataacgct
    17101 actttagcag gacatgtaga aataggcgat tttagcgtag taggaggact tactcctatt
    17161 catcagtttg taagaatagg tgaaagctgt atgatagcag gcgcttcggc tttgtctcaa
    17221 gatgttgtgc cgtattgttt agcagaggga aatagggctt atataagaag tttaaattta
    17281 gtaggaattc gtcgtagatt tgataaagaa gttgttgaag agataaataa ggcttataaa
    17341 tttttattta gaagcggtgg aggattaaaa gatagagctc aggagctttt aaatttaaat
    17401 ccaaatgaat atgcaaaaaa aatgtgtgag tttataataa atacaacaag gggaattccg
    17461 cttgaaaaag gaaaatatta atggctagga aatgtagttt ttgcggtgag agtgaagccg
    17521 aagatagaaa attactagca aatgaaacag atagcgcttt tatatgcgag tactgcattg
    17581 atgctggata tgctgctgtg catggtgatg aaagtttaaa tagtagtgaa aaaacaagta
    17641 aagattataa agatataaca ccaaaacttt taaaagatgt tttagatagt tatgttatag
    17701 gtcaagaaaa agctaaaaaa gtatttagcg taggcgttta taaccattat aaaaggatat
    17761 ttaaacaaga tgctatagaa gatgatactg aaatttcaaa atcaaatatc ttgcttatag
    17821 gtccaacagg aagcggtaaa actcttatgg cgcaaacttt agctagattt ttagatgtgc
    17881 cgatcgcgat ttgtgatgct acgagcttaa ctgaggcagg atatgtaggc gaagatgtgg
    17941 aaaatatcct tacaaaacta cttagcgcag ctggcggaga cgtacaaaga gctcagcaag
    18001 gagttgtatt tgtcgatgag atagataaaa tagcaagaat gggtgaaaat cgctctataa
    18061 ctcgcgatgt aagcggcgaa ggagttcagc aagcacttct taaaataata gaaggaagta
    18121 ccgtaaatat ccctccaaaa ggcggtagaa agcatccaaa tcaagatttt attcagatag
    18181 atacaacaaa tattcttttt gtatgcggcg gagcttttga tgggttaaat gagattatag
    18241 aaagaagaat aggaaaaaat gttcttggat ttggtcagat aaaacgcggt cgcgacgata
    18301 agcaaaattt aataagctta gttgagccag atgatttagt tcattttggc cttatccctg
    18361 agcttatagg acgtttgcat gctattgcta ctttaaatga gataacaacc gatgatatgg
    18421 taaaaatttt aacggaacca aaaaatgctc ttttaaaaca gtatcagaaa ttatttgcga
    18481 tagatggcgc aaatttaaaa tttgataatg atgctataaa agaggttgct acacaagcta
    18541 taaatcgtaa aacaggagca agaggtctta gaagtatcat ggaagatatt atgatggaca
    18601 taatgtttaa tcttccagat cttaaaggat atgatgttat catctcaaaa gacgttgcca
    18661 taggcaaggc aaaaccatta ttaatcaaag cacaaaacta aaagaaggga aattatgata
    18721 ttagatcaga ttattggatt tttttcaagc gatatgggga tagatcttgg tacggcaaac
    18781 acgctagttt tagtcaaaga taaaggtatt gttataaatg agccgagtgt ggtagcagtc
    18841 caaagagaaa agtatggaaa gcaaaaaata ctagctgtag gtcatgatgc taaagagatg
    18901 gtcggtaaaa ctccgggcga tatagaagcc atccgcccta tgagagacgg cgtgatagct
    18961 gattttgata tgactgaaaa gatgataagg tattttatag aaaaaactca tagaagaaaa
    19021 agctttttgc gtcctcgtat aattatatcc gtgccttacg gtttaactca agtagaaaga
    19081 aaagcggttc gtgaaagtgc tttgagcgca ggagcaagag aggtattttt gatagaagag
    19141 cctatggctg ctgcaatagg agcaaattta cctataagag agccgcaagg aagtttagta
    19201 gttgatatcg gcggcggaac taccgagata ggggttgtat ctttaggggg tttggttata
    19261 agtaaaagta tccgcacggc cggcgataag atagattcta gtatagtaaa ttacataaaa
    19321 gaaaagtata atcttttaat cggtgaaaga accggagaag agataaaaat aaaagtcggt
    19381 tcggcaactc agcttccaaa agagctttct atcgttgtaa aaggaagaga tcaagtaggc
    19441 ggacttttaa gcagagttga actaacgagc gaagatgtta gagaggctat gagagagcca
    19501 ttaaaagaga tagccgatgc tttaaaaaca gttttagaaa tgatgccgcc tgatctagcc
    19561 ggagatatag ttgagcgcgg agttgtgcta actggtggtg gagcgcttat tcgtggtctg
    19621 gatagatatc tagccgatat cgtaaaactt ccggtttatg tagcagatga accgctttta
    19681 gcagtggcta aaggaaccgg aaaagcatta gaggagatag gcttacttca gcagcttatg
    19741 aatgaagaat aaaattaaat ttattttaac aatcggttgt ttaacttttg tgtcatttta
    19801 ttttagcgac tatgcaagaa gattttttgt agattctact agttcaagta taggctttta
    19861 tcaaaatttc acagggtttt taaaagacaa gataacagag cattttaggc aagctgaaga
    19921 gatcagagct ttaagagctc aaaatttaga gttagagcgt tcagctgctc tactttcagc
    19981 gtttgcttat gagctaaata atattttaag tgacaaaaac tcaactatct atgctccgga
    20041 agtaaaatta gtaagtgcgc tatcatatgt aaatatgggc gattataata aagtatggtt
    20101 ggattttaaa gagttcaatg aagataaaat ttatggtctt atatataaag gtaggagtgc
    20161 cgggatagta gtaaataaag atagaaaacc tttagggctt ttgcagaccg atcccgagtc
    20221 tatgttttcg gtatttatag gggaaaataa aatttcaggc atcgcaaaag gaaataataa
    20281 aaatatagtt ataaaataca tttcgcagtg gttaaatcca aaagtaggag atgaagttta
    20341 tacaagtggg cttgacggta tattttttgg cggaataccc gttggtaaaa tagttgagat
    20401 aaaagagcaa gatctgtata aaagtgcaat agttgagcct gacaataaaa tagaggttcc
    20461 atcatatctg tatgtagtga caaaggaaaa ttaatgccaa aaagagaaga tgttaagaca
    20521 attttactta taggaagcgg tcctatagtt atcggtcagg cgtgtgaatt tgactatagc
    20581 ggaactcaag cagctaaaac gttaaaagaa ctaggctata gagtcgtact tataaactca
    20641 aatccggcta ctataatgac cgatcctgat tttgcggacg ctacttatat agaaccgata
    20701 accaaagaaa gtataagtcg tataataaaa aaagagaacg tagatgctat acttcctact
    20761 atgggtggtc aagtagcgct aaatgtggct atggagcttc atgaagcaag tatgcttgga
    20821 aacgtcaaat ttctaggtgc gaatccggct gcaatcaaaa aaggcgaaga tagagtcgca
    20881 tttaaagaag ctatgttaaa gataggtatg gatcttccaa aatcaatgta cgcttacaat
    20941 atggaagagg ctatggtcgc agccggcgat atcggatttc cgcttatcat aagagctagt
    21001 tatacccttg gaggcgccgg aagcggcgta gcttataata tagacgaatt tagagatcta
    21061 gccgaagcag ggattgatgc aagtcctata aatgagattt tgatagaaga gagtttgctt
    21121 ggctggaaag agtttgagat ggaagttatc agagacaaaa acgataactg tataatagtc
    21181 tgttctatag agaattttga tccgatgggc gtacataccg gagatagtat cacggtagct
    21241 ccggctttga ctcttacgga taaagagtat cagcatatga gggacgccag ttttaaaatt
    21301 ttacgagaaa tcggtgtaga tacgggcgga agcaatgttc agtttgctat aaatccaaaa
    21361 aacggcagaa tgaccgtgat cgagatgaat ccgcgcgtta gtagaagctc cgctcttgcg
    21421 tcaaaagcta ctggatatcc gatagccaaa gtcgctacta tgcttgcagt tggatttact
    21481 cttgatgaga taaaaaacga tataacaggt actcctgcta gctttgagcc tgtgattgac
    21541 tatatagtta ctaaaattcc tagatttaca tttgaaaaat tccctggctc aaacccgtat
    21601 ttaggcacgg ctatgaaaag tgtgggcgaa gtaatggcga taggaactag ctttaaagag
    21661 agtatccaaa aagcgctttg ttctttagaa aaagattacg ccggatttaa ttttttaagc
    21721 ttggatgagg aaaagctcat tttcggtctt agaaatgcgc atgaaaaaag aattctttac
    21781 gttgctcaag cttttagaaa tggtaaaaat gtagatgaag tttatgagct caccaaaatt
    21841 gatccgtggt ttttaaatca aatttatgag ataaccgaat ttgaaaaaag cgttgacatg
    21901 gatattttga ataacaaaga tcttctaaga aaagctaaaa cttggggctt tagtgataaa
    21961 atgcttgctc agcttataaa tgaaaaagac aacctcgagc ttagtcaaaa cgatatatat
    22021 tacgctagaa taaaacataa aatcaactta gagtacagag aagtagatac ttgtggagga
    22081 gagtttaaag ctcttactcc gtatctttat agcagtacga atatcactcc aaatttaccg
    22141 aatttaaaag tagaaaataa aaataaaaaa gttcttatca tcggcggcgg tccaaatcga
    22201 ataggtcagg gtatagagtt tgactactgc tgtgtgcatg cgagctatgc tttgcgcgat
    22261 cttggcgtta ctacgataat gtataactgt aatccagaaa ccgtctcgac cgattatgat
    22321 actagtgata ttttgtattt cgaaccgatt gattttgagc atttaagagc cgtgatagaa
    22381 gcagaacaac cagatggcat tatagtgcat tttggtggtc aaactccact taaattttca
    22441 aagcgactta ctatgatagg cgctaagata atcggaacta gcgctagggt tatcgacgtt
    22501 gcagaagata gaaagaaatt tagcgagttt ataagcaaaa tcggtgtaaa acagccgcaa
    22561 aacgataccg caactagcga atcagaagcc gtgcaaaaag ccgctgttat aggatatccg
    22621 gttcttgttc gtcctagcta tgttttaggc ggacgcgcta tgagaagagt acatagcgaa
    22681 agtgaactca aagaatatat gagcgaagcc gtaaaagtta gcaatcactc tccggtgctt
    22741 ttggataaat ttttacaaga cgctaccgag ctagatgttg atgctataag tgatggtaaa
    22801 aatgtttata tcggcgctat tatggagcat atagaagaag cgggaattca tagcggtgat
    22861 agtgcgagta tacttccgcc tcaaaattta agtaaagaga ttataaatca agttgaaatt
    22921 tgcactaaag atatcgcttt gaatttgggc gtagtcgggc ttatgaatat acaatttgca
    22981 gtgtatcaaa atgagcttta tattatcgaa gtcaatccgc gtgcaagtcg tacggtaccg
    23041 tttgtaagca aagctacagg cattcctatg gcaaaggttg caactagagt tatgtggcaa
    23101 gggaatcttc ccgaagctct taaattctat gatcagtttg atgttgtgac aaaaaacagc
    23161 agcgtatata aaccaaatat taaaaatata gtttgcgtaa aagagagcgt atttccgttt
    23221 aataaactaa gcggagccga tctgatctta ggtcctgaga tgaagagtac cggcgaagtt
    23281 atgggcatta gcgatagttt tgcaaagagt tttgttaagt ctcagatcgc agcaaaaaat
    23341 agtcttccaa gcagcggaaa agtatttatc agtttagctg acgccgataa acaaagagga
    23401 atagagcttg caaaagagtt tgttactctt ggttttgtag ttctagcaac tggtggaacg
    23461 tataaattct taaaagacgc agcaatagag tgcgaaatgg tctataagat aagcgaaggt
    23521 cgtccaaata tagaagataa attgaaaaac ggcgaagtca gcttagcggt aaatacgagc
    23581 gataataaat caagctcaag cgacgcacat aaaattcgcc aagccgtgct tagatttaag
    23641 attccgtatt ttacaaatat gaacgcagct ttagtcgcag ctaaatccat aagtgcaaac
    23701 gaagcagctt tggaagtaaa aagcttgcaa gagtatctag aaaaatgatt aaatttagta
    23761 attcggagct agaagaactt gtaaaaagcg atattccttt taacgatctt accaccgagc
    23821 ttatggaagt tcaagcaaaa gctaaacttt gcataattac tagagaagat atcacgctta
    23881 gttgtttaga cgcggtgagt caaatttgca aggtaagaga gcttgagttt tattcgaatt
    23941 ttaaaaactc tatgcaagct agaagcggca ctcaaatttt aagcgtgatc ggagatttta
    24001 acactcttca cgctacatat aaaactattc aaaatttact tgagtatgct tgtggtatcg
    24061 caactagcgc aaatttgatg ttaaaaagcg taagagaaat tagtcaaaac tgtgaaattt
    24121 tagttactag aaaagttttt ccgtttgcaa aaaaactctg cttaaaagcg gcgcttgaag
    24181 gtggagcaaa agtgcataga ctggggctta gcgacactgt tttgtttttt gaaaaccata
    24241 caaatgctta tataaattta gatgagtttt tatctgatat ctctaaattt aaaaatagac
    24301 tttgcgagag aaaaatcatc gtcgaagcta gtgatttaga atttgcaaaa gctgctttaa
    24361 aagccggaag cgacggtgtt cagtgtgata aaatgagcgt ggacgaagtt caaaacttag
    24421 tagagtttaa aaacgcgaat ttcccgaatt ctatcatttt agctgctggg ggtataaatg
    24481 agtcaaacgc cgcgcagtac acaaaaacag gcataaacgc catagtaaca agtgcagttt
    24541 ataaaggcgt tgcaaattta ggagctagaa taactctttt atgatttatt tagcacaaac
    24601 cgatacgacg gccggatttt taagccaaaa cttagaagag ttaaataagc ttaaaaatcg
    24661 tccattagat cagccttgtc ttatttgcgt aagtaaattt gaaatgttga aaaactttac
    24721 tcgcgtgccg tgtaaattca aaaatcttgt acgaagagct aagaaaacta cgttcatata
    24781 tccaaacacg aaagcaataa gagttataaa agatcatcct cattcaaaat ttcttgatga
    24841 gcttggttgg gcgtattcaa gtagtgcaaa tatccatgga caaaaatttg atttacaata
    24901 tgctaagagt agttgtgatg tcatagtagg tgaagttttt agtgaaacta agccatctaa
    24961 tatatataaa ttatctaaat gttctataaa aaaaattaga taatattata atataattat
    25021 ttttttattg taattttatt atttttactt cattattatt ttgcaatctt actatttatg
    25081 aaaattaact agaaagggta gaagatgttt ggaaaagcaa agcaaattca acaaacagat
    25141 acacactgta cggagttgca agatatatta agagcccatt aaacatacga tggctgttat
    25201 agaattttca acagagggaa ttataatcga cgcaaacgaa aacttcttgc gtacgatggg
    25261 ttatactttg gacgagatta aagacaagca tcatagtatg ttttgtcttc cagatgttgt
    25321 gagatctatg gaatacgata atttttggat tgatttgaga gccggaaagt caaaaagcgg
    25381 actatttaga agaatcgcaa aaggcggcaa agatatttat ctagaagcaa attatatacc
    25441 aattttagat gtaaatggaa gagtatataa aattataaaa tttgcaaatg atatcacaac
    25501 tagacattat gagcttatgg atcttaaaaa tactatatat gctgcaaatc gctctatggc
    25561 tattattgaa tttagaccag atggcactat aattaatgca aacgaaaact tcttgcgtac
    25621 gatgggttat actttggacg agattaaaga caagcatcat agtatgcttt gtgattctag
    25681 cttttctaac tctaaagaat atgtgggatt ttggactaaa ttaagaaacg gagagttcca
    25741 gtctggaaaa tacgtcagat atggtaaggg tggaaaagtc gtatatttag aagctagtta
    25801 taatcctgtt agaaatgaag atggaaagat atataaagta attaaatttg ctactgatat
    25861 aagcgaacaa gtaatcaaag atcaagaaaa attaaaacta attagtgatt tggcagataa
    25921 aaatgataat cttactcaag atggagatag agttatagaa aatacagtgt caaacgtaca
    25981 aaatatagca gatatgatgt ctcaaagtag tactttagta gcgtcgctta atcaacaatc
    26041 agatgaaatc aaatctatca ttcaaacaat tagcgatatc gcggatcaga caaatttatt
    26101 agcgttaaat gcggctatag aagctgcaag agccggagac cacggacgcg gatttgctgt
    26161 tgttgccgat gaagtcagaa gtttggccga aagaacagaa cactctgtaa gcgagatatc
    26221 aactactatt agttctatta gagatgttac ttcacaagtg gttcaaagta taaaagatgg
    26281 attagaagat gtaaatcaaa gcgtcgaatt agctaaagag gctaaagatt gtatgcaaaa
    26341 aatcagagca agttcggcag aagtggctaa cgcaatgtct caaggagttt aaagaacctt
    26401 tttaggttct ttaaatattt aagaaatatc gtctttgact attttttcta ttattccaaa
    26461 tttaattaat ccgactctat tttttcctgc ttgtaaaaat gctacgctat cattcggttt
    26521 tactttaaat attttagatt ttattttcag cttttttcgt cttccaaata gtgaatttat
    26581 aaaacttata ggcttttttc tattccaatt taattcgtga tttactctaa aatgttttgg
    26641 aagtcttgtt tttttaccgt ttatcacgaa gtatctgatg cttccagtaa gtacgcttcc
    26701 tccatagaga tgcagtctag accagaccgt gagcgaactt agaatttcta ctaatttttg
    26761 actatttgga tcgggttttt taaatttaaa aaacctatct cgtctattta aactatgtaa
    26821 aaactctcta ctttttttga tatatatata ttgtttttaa atccagaatc aaactttaaa
    26881 ttcgaactca taaaaacaac ttgcggatat atctcatagc cgcttaaatc aaagcctgaa
    26941 gatcttagat gatttacaaa aaacgttgta tttctaagta attttttaag tggatttgaa
    27001 tgatttataa ttttttgctt atttatttgt atccattcat cattttcatt tatacttact
    27061 gttccagacc agttttttat ctctataaga tatatttttt tgccatcaag tatgataaaa
    27121 tctatctcgt gcagacttgc taaacaatct tttattcttt tatttttaaa tacgcatatt
    27181 ctttttattt tgcttagttc tatcgcaaat tcgctctcag ccaagcttcc agctacgctg
    27241 cttaaatcag gtgtcgtttt tgtaggattt gctagaagct taaagttttg ccaaaaatta
    27301 agcatgagtt atcttttgta cgcaaagact agctaaattt aatccaaaac tcgcagttac
    27361 gcctataaaa cttccaagat ctttgcaatt tggcatttcg gtagaaaaaa caactttgta
    27421 gtcgttttta aatccggctt tttttagctc gtatcttatt tttctagcaa acggatcatt
    27481 tgttgttttc caaatgctcg ctacttgtat tcttgtagga tcgagtcttt ttgctcctcc
    27541 cattgagcta agcagttttt tatgacattt ttttgctatt tctactttgg ctggaacatc
    27601 atctatgcag tctataacaa catcaaattt agaaaaatcg aattcctcta caatctcttt
    27661 tgtaagtttt aaattcaatc ctaaaatacc tggatatagc ctagtaaata cgtccgcttt
    27721 tagctctcct acaaactggc ttcctatttg gcggttttga tttgttatat caaatttatc
    27781 gcagtctata actgttaaat ttactactcc gcttctatac agcgcgtcta tacatacccc
    27841 gcctacaccg ccacagccgc acacaagaac ttttgctttg cttaattttt caaaattatc
    27901 tccaaagagc catcttgctc ttgtaaatct atcattaatc tgcattatta tatccaactc
    27961 tttagtctat ttatactatg atgagcggtc atatcaagct ttatgggagt tagtgacgcg
    28021 tatccgtcaa aagtaacggc taaatcacat tcgttatcat tttctttaag gtaatgtata
    28081 ttcggcgttc ctaaccagta atactctaac cctcttggat ttctatgaag ttcggcgttt
    28141 gtgttgtacg cctgatgacc tgctgggact atttttagcc ctttgtactc attttttgga
    28201 actgctggaa tatttaaatt taaaaactct ctgccattta gcgggaaacc attttcaaat
    28261 atgtttttta ctatatcagc actgatctca caagctaaat caaaaccgta tttatctatg
    28321 ctatcgtttt tatataaaag agatatcgcc atagacgcca cgccttgcaa agtaccttcc
    28381 atagcgcctc cgcaagttcc tgaatacgtg atatcttcgc ctaaatttgc gccgtgattt
    28441 ataccgctta ttataagatc tggttttttg tgtttataca tagtttcaag cgcaagatat
    28501 atgcagtcgc tcggcgttgc gtcatcaagc ttaaaaaaac cgtcatcaag ctggataaat
    28561 ctgagtgggc gagttaatgt tatagagtgt gcgcaagctg atttttcact gcttggagcg
    28621 actaccgtta cttttgcgat gtcttttaaa gcgtttctta aagctctaat tcctaaagct
    28681 tcaaaaccgt catcgtttgt tattaaaatt tctttcaaat ttgacccctt tgcattaatt
    28741 ttatccgaac tttttaaatt tttgatataa tgaaataaaa agataggatg ccttttatga
    28801 aaattttagt ttcttgcctt gaagcttcgg caaatttaca tttagaagag gttttaaaat
    28861 atcttggcga tactgaaatt tgcggaattt tcgataaaaa attcggtgaa ccgctttatg
    28921 atagtaaaga gttttcagct atggggtttg tagagatttt accattgatt tttaaggcta
    28981 aaaaagcttt aaaacagatg gttaaacttg ctaaaaactg cgataaagtt ttattgatcg
    29041 atagccctgc gtttaaccta cctttagcaa aagccataaa agaagctggg ctaaaatgca
    29101 aagtaactta ctacatactt cctcaagtct gggcgtggaa aagaggacgc gcggctaaag
    29161 tagaaaaata ctgcgataat ttagcttcta tcttgccttt tgatgcttcg ttttattcgc
    29221 gctcatatta tgtaggtcat cctttgcttg atgagataaa agtacaaaaa aaagagcttt
    29281 taaatagcgg agttatagca tttttacccg gttcaagaaa gtctgagata actagactta
    29341 tgcctatata caaagaggtt gcgtcaagcc taaacaataa aaagcttcta gtagtaccac
    29401 tgaatttaaa gaatgatata gatgaaattt atggcgacgt gagcgaattc caaataattt
    29461 ttgacactca cgcagctctt ttacaaagcg aatttgcctt tgtttgttcg ggaaccgcta
    29521 ctcttgaagc ggctcttata ggaactccgt ttgtgctttg ttataaagca aaagcgattg
    29581 atatatggat tgctagaaaa ctcgtaaaac taaaacacat cggccttgca aatataatgt
    29641 tcgattttat ggataaagaa gcactaaatg tcgagttgat ccaagagcaa gttagcaaaa
    29701 aagctttact tgatgagtat aaaaattgcg atagaagtaa gtttttagga gcttgtggtg
    29761 agcttagaag ctatttaaaa cacggaagcg ctaaaatagt cgctgatatg gttttaagcc
    29821 aaaattagat aaaatcatta aaaaatgggt tcaaaggaga caaaatgaca gagccgatga
    29881 cgctatatgg ttatgaaaaa ttatcatctg agttaaagga tctaaaactc gtccaaagac
    29941 cagccatcgt tgaagagatc gatatagcaa gaagccatgg agatctaaaa gagaacgccg
    30001 agtatcacgc cgcaagagag aagcaggctt tcatagaaaa ccgcatagcc gagcttagcg
    30061 atatattaag cagagcaaag gtgataaacc cgagtgaata cgaacacgac agagtaaaat
    30121 ttggatctac tatcaccata atggacgttg ataccgagtt agaaacgact tatactatag
    30181 taggaatcag cgaaagcaat cttgaaaggg gtcttataag tatcaatacg cctcttgcaa
    30241 aacagttaat cggtaaaagt gagggcgata atgtaacttt aagcttacca aatggaataa
    30301 gcgagataga gatagtttcg gtatgctata aaccgatcaa atttgattaa ggttgaagat
    30361 gaaaataagc gtcggcataa taggaatcag tggatatacc ggacttgaat tagtaaagct
    30421 tttgataaat catccaaatt ttgagctagt ttatgcagga gcaactagcc aaaatgagct
    30481 tgaagatctg tttccaagtc ttaaaaacgt gctaaattta aaagtcgaag tcgcagatac
    30541 aaatgaagta aaaaagcgtt gtaaacttgt atttttagca cttccgcata ctgaaggtat
    30601 gaaggtagta aaagagctaa aaggctcaga cgtaaagata gttgatcttt ctgctgatta
    30661 ccgcgtgagc ttagaaaatt atgaaaaaaa ttactgtccg catttggata aaagcgggtt
    30721 aaaagaagcc gtttatggac tagtagagat aaatagggac ttgataaaaa ccgcaaattt
    30781 gatagcaaat ccgggatgct atccgacttg ttcgctttta gctttactac cgtttgtaga
    30841 tatgctagag cctaaatttg gtgtaatgat agacgcaaaa agtggtctta gcggtgctgg
    30901 aaaaagtcta aaatccacta gccattttgt aagcgtaaat gaaaatgtaa atgcttatag
    30961 tcctcttact cataggcaca gtgatgagat aaaagagcat ctaaacaaaa acctcaaaaa
    31021 cgggttaaaa gatgatatcg aaataatgtt cgtgccgcat ttagtgcctc ttactcgcgg
    31081 aatgttagtg agtagttttt tgcttcttaa agatgagttt aaagatattg atccactaca
    31141 aattttaaga gatttttata aaaatgagaa gtttatccgc attcgtaccg aaccagttaa
    31201 tacgaaattt gtaagcggaa cgcatttttg cgatattttt gtgataaata aaaacggtaa
    31261 actctggata aactcaagta tcgacaatct tcttcgcggc gcttctagtc aagctttggc
    31321 aaatgcaaat ttgatgtttg ggtttgatga gagtttagga cttccttttg tcggcaattc
    31381 tatatgaaag aaattttaga cggcgcacta tttatcgcgg acgctcacga taatgcaaat
    31441 aaaaaaagct ttttaaattt cctaaaggct ttgaaaagtg gagctattct ggctccgccg
    31501 cagcttttta taatgggaga tatgtttgat tttcttgcta atactacgta ttcacaacta
    31561 ttttattctg agcaaataga gcttttaaat gagcttggta aagatattga tatatattat
    31621 tttgaaggca atcacgattt taatctaaaa aatatatttc caaatttaaa agtatttgac
    31681 atctactctc agccgcaaat ttttaatgca aacggtgaaa aaataagtct tgctcacggc
    31741 gatatatttt taaaaccgtt tgaaaccttt gttttaagat ctcttagaaa taagattttt
    31801 ttatggttta tggataaaat agatggattt tttaaattta aaatctcaaa atcaatttta
    31861 aaagcacaag aaaataagaa tctaaattat aaaattattg attttacttt tgtgataggc
    31921 gctaaaattc ataattatca aacctcaaaa atcatcgaag gtcactatca ccaaggtgta
    31981 aatttaaaga ttgaagataa aatttatatt aatttacctt gttttgcgtc tgaacaaagg
    32041 tattttatag tagaatacga ccatgaaata aaatttcaaa tcgtaaggag cccaaatgtt
    32101 tgatgataat attcttaaaa cgggttcgaa tgagatggaa cttgttgatt ttcgtatatt
    32161 taagcaaggc aaagataagg tctatgaagg tatttatgga gtgaatgttg ctaaggttaa
    32221 agagattatc aaaatgccaa atcttaccga acttccaggt gtgccagatt atatcgaggg
    32281 gatttttgat ctacgtggag tagttatccc tgttataaat ctagccaaat ggatgaatat
    32341 agcagaacca agagataaca tattaaagcc gcgcgttata atagcagagt ttagtgatat
    32401 ttttataggt tttattgttc atgaagcaaa aagaattcgt cgtataagct ggaaagatat
    32461 agaaccggca aattttgcag gtggtgcagg aagcggaacg cttgataagt caaaaataac
    32521 aggcgtaact agaatcgaaa atgacgaagt tcttttgatt ttggatttag aaagcatagt
    32581 tgaagagctc ggaatttatc agccaaaaat tgagatggaa atcgatgaaa tgagacaatt
    32641 aagcggtatc gctcttgtgc tagatgatag cttaactgct agacgtctag ttggagacgc
    32701 tcttgctaag atgggtctta gagtagttga agcaaaagac ggatctgaag gaatcgagaa
    32761 aatgaatgat ctttattcgc tttataaaga tgatttagat cagaatttaa aagtcatcat
    32821 aagcgatata gagatgcctc agatggacgg ttttcacttt gcagccagct taaaagaaga
    32881 taaaagattt gcaaatattc ctattatctt taactcttcg cttagcaatg agtttagcga
    32941 gattcatgga aaagaggctg gagctgatgg gtatttgacc aaatttaatg ctacacagct
    33001 ttacaaagag gtcattaaag ttattgatgc tcataaaaaa tatattagtt aagaggtgat
    33061 ttatggatga tatgcaagaa atacttgaag actttttagt cgaagctttt gagcttattg
    33121 aacagattga tcacgatctt gtagagcttg aggcaaaccc tgaggattta gagcttttaa
    33181 acagaatttt ccgtgtagct catacggtta aaggaagttc atcattttta aattttgata
    33241 ttttaacaaa acttactcat catatggaag atgttttaaa taaagctcgc cacggtgatt
    33301 tgaaaataac tcctgatata atggatgttg ttttagaatc tgttgatatg atgaaagctc
    33361 ttttaagaag tataagagat aacggtagcg atactagcgc aggaataagc atagatgata
    33421 tttgtattag acttactgct ataagtgaag gcgaagcacc gcaatctagc caacaagaaa
    33481 caaatgatgc tccaaaacaa gagcctaaag aagaagccaa tactaacgag cctaaagaag
    33541 aagagcaagt agatgaatcg gctaatgatg ttgatgtaaa tagtttaagt gaagctgaag
    33601 tggaagctga gatagaaagg cttctaaaag ttagaaaagc agaagatcaa gccagaaaag
    33661 agcagagaaa aaatgagcat catgaagatc caaaacctgc tccaaaacct gaacctgctc
    33721 caagcaaacc ggctgcttct gagacaaaaa acgctccggc tcaatcaagc ggttcagcta
    33781 tagagcagac tattcgcgtt gaagtaaaaa gacttgacaa tcttatgaac ctcataggcg
    33841 agttggtttt aggcaaaaac agacttctta aaatttatga tgacgtagaa gagagatacg
    33901 agggagagaa attcctagaa gagctaaatc aggtagtttc ggctttaagt cttgttacga
    33961 ctgatattca attagctgtt atgaaaacaa gaatgctccc tatagcaaaa gtatttaata
    34021 aatttccaag aatggtaaga gatcttagcc gtgagctagg taagcaaata gatttagaaa
    34081 ttagtggtga ggaaactgag cttgataaat ctattgttga agagatagga gatcctttag
    34141 ttcatattat cagaaactct tgcgaccacg gaatcgaaga tccaaaagat agggctcaag
    34201 caggaaagcc agaaaaaggc gttatccagt taaaagctta taacgagggc aatcacattg
    34261 tagttgagat agtagatgat ggtaagggaa tcgatccttt atcagtaaaa atgaaagctg
    34321 tcgagcgcgg tatcatcaca gatagagaag cggacgcaat gagtgataaa gaggcatttg
    34381 ctttaatatt taaacctgga ttttcacttg caaaacaagt tacaaacgta agtggtcgcg
    34441 gtgtcggaat ggatgttgta aaaacaaata tcgaaaaact aaacggtata attgatatag
    34501 atagcgaggt aggtaaaggt actattatga agctcaaaat acctttaact cttgctatta
    34561 tccagtcttt acttgtagga tcacaagaag agtattacgc tatacctttg gctagcgtta
    34621 aagagaccgt tagagttcca gtggataata tctacaccat agaaggtaaa aacgttctta
    34681 gactaagaga tgaagtttta agtctcgtta gacttagtga tctgtttggt gtcaaacagg
    34741 tatttgaaag tggtgatcag acgtatgtgg tagttataaa cgtggctgaa agcaagctcg
    34801 gtatcatagt agataatcta ataggacaag aagagatcgt tattaaatct cttggtaact
    34861 atttgcaaaa tatacgagga attgccggcg gaacgatcag aggagacgga aaagttactc
    34921 tgatagttga tgtgggaatg attatggata tggcaaaaga gcttaagata gatatcagag
    34981 ccagtataga atctagcatc aaagccgttt caaaagataa accaagcgat tataaggttt
    35041 taattgttga tgactcgaaa atggatagaa caattatgca aaaatcactt gaacctatag
    35101 gcgtaacggt tatagaagca acaaacggtg ttgaggctct aaatataata aaatcaggcg
    35161 atcatgttat agacgctgta ctgatagata tagagatgcc gcgaatggat ggatatactc
    35221 tagccggtga gattagaaag tattcaaaat ataggaattt acctcttatc gcagttacga
    35281 gtagaactag taaaagcgac cgtttaagag gtgttgaggt tggtatgact gagtatataa
    35341 caaaacctta ctctccagag taccttgaaa atgttgttag aaaaaacatt aagctcatgt
    35401 aaggaagtaa aatgaacgat aaattaggtc aagttttaca aaaacagaag caacaaatat
    35461 ctgagcctac tgcaaaagac agagatgaaa tagagcagct ggttggattt atagttggtg
    35521 aagaggaatt tgctattccg attttatata tcaaagagat tataaaaccg atagaatata
    35581 ctagagttcc tagtgttccg gattatgttt taggtgtttt taatctaaga ggaaatgtta
    35641 tacctcttat agatttaagg attaaattca atctaaatcc atctaaaatg acggcaaata
    35701 ctcgctatat cgttatgaaa gatgatgata atatagcagg atttgttatc gacaggctta
    35761 ctgaggctat taggattaac aaagatagga tcgatcagcc acctgagact ttagcaaaag
    35821 ataaaggcat gattcaagga atcggcaaaa gagataacaa catacttacg atactaaaag
    35881 ttgaagcact tttaaaacgt gatttttaag ggttgatatg ataaaacttt gtgtttttga
    35941 ctttgactct actttaatgg atggtgagac tatcaccatc ctttcaagtg ctgttggaaa
    36001 agataaagag gttagcgata ttacaaaaag agctatggcc ggagagcttg atttttatga
    36061 aagtctagta aaaagagtaa aatttataga aggattaaaa cttcaagatg ctataaaaat
    36121 aacttcaaat ttaccgttta tagacggtgc tggtgaaatt atctcatatt taaaagcaaa
    36181 agatatcaaa attatagtat ttagcggcgg attccatata gcaactgatg ctgctcaagc
    36241 taagcttaaa tttgatataa attttgcaaa cgaacttcat cataaaaata gtattttaac
    36301 aggatctgtc ggcggagaaa tgatgtttgg agactcaaaa ggaaagatgc ttgcacgtct
    36361 aaaaagtttt ttaaatttaa aagatgatga gatagtttgc gttggagatg gcgcaaatga
    36421 tgtttctatg tttaaagaag caggtatggg catagcgttt tgtgcaaatg agatcttgaa
    36481 aaaagccgca actcatatag tagatacaaa agatttaaga gaattaaaac aaattttata
    36541 aggtggttat attatgtata gggatatcaa attttcactt tggtgtgatt ttttggagag
    36601 agattttata aatggcgagt ttttaaattt aatagaaaat tcggttataa acggcgctac
    36661 gagcaatccg tctatattta aatctgctat ttgttcatct tgtgcttacg cacttttaaa
    36721 agatgaatac aaaagaaaaa gcccaaaaga gttatacgaa attttagcta cgacagatat
    36781 aaaaatggct gcaaataaac ttctaaaaaa ttatgcaaat gatgatgacg gttttgttag
    36841 cttagaagtc gatccaaatt tatatgatga tagcgaaggc acttataaag agggaaaaag
    36901 actatttaat attatcaaaa tgccaaacgt aatgataaaa gtccctgcca ctgatagcgg
    36961 atatgaagct atgagtgatc ttatgaaaaa gggaattaac gtaaatgcta ctcttgtatt
    37021 ttcgatctct caagtaaaag agtgcttaga agcttttagt gaaggaagca gagcttatgc
    37081 taaaaggttt ccaggaactc cgcttccaaa aggcgttatt agtatctttg tgagtcgttt
    37141 tgataggctg cttgataaga gtcttaaaaa cgccggacta gagacttcta agtttggaat
    37201 ttacaatgct acaaaagctt ataaaataat agaacaacaa gataataaaa atataagagc
    37261 tttatttgcc agtaccggag taaaaggtga tgagttgccg gcggactact atataaaaga
    37321 gcttttatat aaaaatagta taaataccgc tcctcttaac actataaaag agtttatcaa
    37381 agatatgagt gagccaaaat ctccgcttga atgcagcatt atagacgagt actttgatag
    37441 gactaagaag gctgatataa actatgaaaa aagttgtaaa atacttttag aagatggttt
    37501 aaaagcattt tgtgaggcgt ttgacgatat tttaacaagc ttaaaataaa gtaaaatgat
    37561 gacttatgac gtaaatatcg atcagcttga ctttaagcta agagacgagt taaatacata
    37621 tttattagag cttataaact cttcaggaag tgacctacac gtaaaggctg aaggtatcat
    37681 aagaaaacgc gtaaaaggtg agatagttcc tatatccaat agacgcgttt taagctcaaa
    37741 agaggcgatt acccttgcaa aagagctttt aagaggtaga tttaatgagc tggttgagaa
    37801 aaaaagcgtg gattttacct ataaatttaa tgatgattat agattccgtg taaatacatt
    37861 ttttcagatg gatggcgtaa gttttgtgtt tcgtactatt cctacaaaac ttcctacatt
    37921 tgatgagtta gggcttccaa atgcggttga gcatatgtgt aaagagattt atagaggtat
    37981 aattctagta acaggaccta ctggaagcgg taaaactaca actcttgcta gtatgataaa
    38041 ttacataaat aaaaatagaa aatcacatat cataactata gaagatccta tagagttcgt
    38101 gtataaagat gaaaattgta ttatcaacca aagaagtatc ggtcaagata ctacaaattt
    38161 tgcagatgct cttagaggtg ctttgagaga ggatccagat attatattgg tcggagagat
    38221 gagagatctt gaaactatag aaatagctat gcacgcagct gaaaccggac accttgtttt
    38281 atctactttg catactgtag atgctaaaga taccattggt agaataatta gtatgtttcc
    38341 cggaaatgaa caaaatcgta taaaattaag tttagcttct gtattaaaag gtattattag
    38401 tcaaaggctt tgtaaaagag ccgatggaag cggtagggtg gctgctcttg agataatgct
    38461 tgcaactcct agaataaaaa atttaatttt ggaaaacaga gcatctgata tgatatatga
    38521 cgccatagca gaaagttctg caaatagcgg tatgcagacg tttgatacgc atttgttgaa
    38581 actttttata gacggtataa tcacaaaaga agaagcttta gaaatttcaa gtagaagaaa
    38641 tgatctagaa attcgtataa aagctgctga acttgaatct agtttaggta aagcaacgca
    38701 aaacaaagat aatagaacaa tcgacgattt gatagcgttg aaagatatcg gctaagctta
    38761 aatttaacag tttctaggta taatcgccaa ctattttatt tcataaggaa acataatgtt
    38821 agaaggtatc gttagagaga gtattgacaa gagaagtaca aaagctctta ggaaagatgg
    38881 ttatctaatc gctaacattt acgcaaaagg tgttgaaaat attaacgctg catttaaagt
    38941 aaatgatttt ataaaagctg taaaagtcaa gagcgatctg aaattccaag ttagcgtagg
    39001 cggaaaaacc tatgatgtcg tagttgttga ttatcaaaaa cacccagtaa caagcgcatt
    39061 aaagcacgtt gatttaaaag tcgtgcttga tgatgaagta tcaaaatata tgattcctgt
    39121 taaacctttt ggaacaccta tcggttttaa aaacaaaggc gttttacttc aatctaaaaa
    39181 acgtttggcc gtaaaatgca aaggtaaaga tttgataaat agtttcgatg ttgatgtaag
    39241 cggacttgac gtagatgata ctatacttgt acgtgatata aaaacagttc cgggcgttcg
    39301 tatcttagat gccgatcgcg ttgctgtact aggcgtaatt aaagctaaat aatgactctt
    39361 gtagccggac ttggcaatat aggcaaagag tatgaaaata ctcgccataa tgtcggtttt
    39421 atgttgatag acactatgct taaagacggc ggatttaaca gcgtaagctc cggtaaattt
    39481 caaggcgaac tttttaaaaa gggttcgctt cttcttctta aaccatctac ctttatgaat
    39541 ttaagcggta attctttaaa agccgttaat gacttttata agccagataa tataatcgtt
    39601 atacatgatg atcttgatct tccttttgga actgtgagat ttaaacgcgg cggaagcagc
    39661 ggagggcaca atggtatcaa atccatagat aatcttatag ggaacgacta tgatcgtgtt
    39721 cgtatcggaa taggacgtgg aaataatagt gttatcagtt atgttttagg cgaatttatc
    39781 gatgatgaaa aagatagatt aaaagatgtt ttagcacatt gtaaaaatgc tgttttagag
    39841 cttatatctt gcggtgatat aactcaaatt tcttcaaaat ttacacttaa agcttgattt
    39901 taaattttca aatttatatt ttatccaatt cttgatataa ttgtttttac ataaatataa
    39961 agatgagaaa atgaaattaa acgatataaa aaccccggct tatgtttgcg aagaagctgc
    40021 tcttgaaaat aatttgaaaa ttctaaaaaa tattagcgat gaaagcggcg caaaggtact
    40081 ttgcgcttta aaaggttttg catttagcgg tgctatggag ttggtttcaa agtatttaaa
    40141 cggagctact tgtagtggtt tgcacgaagc aaagtatgct aaataccatg gatttaaaga
    40201 gatccatacc tactctccgg cttttagcga tgatgatata gatgaagttt taagcatatc
    40261 tcatcacgtg gtgtttaaca gttttgcaca gtggaataaa tttagatcaa aatctataaa
    40321 aagcggaaaa agtataggtc ttagagtcaa tccaaacaca tcggctagcc caactgatat
    40381 gtacaatcct tgcggagagt tttcgaggct tggcatcact aaagataatt ttgatttttc
    40441 aaatttagat ggtgttgagg gtttgcattt tcacgcactt tgcgaagaga gcgctaaaag
    40501 tttagagttt gttttaaaag catttgaaga gcagtttaga accattattc caaagatgaa
    40561 atggataaat ttcggcggcg gtcaccacat cacaaaaagc ggttatgata taaatttact
    40621 tataaatctc attaagagtt ttaaagaaaa atatggcact cagattttta tagagccagg
    40681 agaagccgta ggttggcgat gcggatttct tatttctagc gtactagata tagtaacaaa
    40741 cggtgaaaaa acatgtatta tagatgcgtc agctgagtgc catatgccag atactattct
    40801 tatgccttat cgtcctagta ttcgcggtga aaataaaaat ggtaagtttg cctaccgttt
    40861 tggcggtgcg acttgtcttg cgggagatat cgtaggagca gccgcaggtg agccgatttt
    40921 taaatttgac aatgagataa aagtaggcga caaggttatt tttgaagatc aaattcacta
    40981 tactatagtt aaaaatacga cttttaacgg tgttaaactt ccaaatttgg ttatgatgaa
    41041 taaaaatgga gatgtaaaaa ttattcgaga ttttggttat gatgagtata gtcgtagaaa
    41101 ttaaatttgt ttgttaaaac aataattcaa taaattaggt ataatttata aattcaaggt
    41161 ttgaatacta caaagcaagg agaaattatg cagattgatt gtcgtggact tgagtgccca
    41221 aagccgatta ttaaaactag agacgcttta aatgagctta gtatcggaga taagctcgaa
    41281 atagtcgtaa atagtcctgc ttcattggca aacgtacaga agtttttaag cgcaaacggt
    41341 ttagagttta atatctctca aaatggaagt gaatataccg ttactgctgt taagagttgc
    41401 gatcttacgg aaatagatat tcaaaattat agttgtgaaa cggattttaa aaagcataag
    41461 gtgttatttt taaaatacga taaagttggc agcgatccta taggaaaagg acttttaact
    41521 aaatttttaa gtgcgatatc tgctgttcaa gcgaacaaaa gagtgactca tattatctgt
    41581 gttaatgaag ctgttcttat gactacaaat agatctcatc ctagctttgc tgtattaaaa
    41641 gatctttcat cgcttggaat aaacgtgctt agttgcggca gttgtttaga atcttttggt
    41701 cttgttgata gacttggagt aggtcagatc agcaatgctt ttgaaataat gagtttaatg
    41761 ttggaaaatg aaacagttta tctataataa taagaacctt actaaattta taaaatccgc
    41821 aggatgagct gccaaactag acccgttggg tttaacacaa agcatcggca gtatcttaga
    41881 gccccatagt aagcttctat catctataaa tagcaacgaa gatgccgggg tatttctgct
    41941 agaagacggt agagctatcg tgcagacttt ggattttata actccggtag tcgatgatcc
    42001 gtttttatat ggaatgatag cagccgcaaa ctctttaagc gatatattcg ctatgggtgc
    42061 taaagctata acggctatga atatagtcgg ttttgatagt tgccattttg aaaatgaaat
    42121 tttgcatgag ataatggctg gaggaaaaaa caagataaaa gagtgcggcg cggttttagt
    42181 cggcggacat agtatagaat ctaaagaaac tatttacgga ctaagcgtaa caggaagcgt
    42241 agatagtagc aagttttggt caaacaactc agcaaaaatc aatgatatat tgatactaac
    42301 aaaacctctt ggaagtggtg ttttaacaac tgctttaaaa gcggatatgc ttagtttaga
    42361 tgagatacgc gagatttcaa atttaatgtc tcagctaaac ttttatgccg ttgatgcttt
    42421 atctggttta aaagttaatg ctgttaccga tgttaccgga tttggatttt tgggtcattt
    42481 aagcgaaatg ttaagagacg atatcagctt tgacctatat aaaaacggta ttcctttgct
    42541 agctagcgcc aagaagtttg caaatttagg ctttattcct gagggaagtt ataaaaatag
    42601 tgtttttact gctaaaattt gcaatatcaa accagatatt ttgctaagtg atgcccaaac
    42661 tagcggagga cttatcatca gcataaatga agatgatgct tataaagcac tttcaaattt
    42721 aaaaaatgca ggatatgaga gctcttgtat agttggaacc gtaaaaagca agagtgaata
    42781 taaaataaat ttaatctagg agtaataaat gaattttaaa gaggctttaa attttcgtca
    42841 tgcatgtaag gtttttgatg aaaatagaaa aatagacagt gcggatttta atgatatttt
    42901 agaagcgggt cgtttatccc catcttctat gggtatgcag ccgtgggaat ttgaagtgat
    42961 agaagataag gaactcttaa aaaaaatgag agaagcatgc tggaatcaag ctcagatcac
    43021 gactgcctca aaagtcatcg tgatctatgc taagatagac gatctaagag ctagctcaaa
    43081 ctatgttaaa tctataattt gcagtagaaa agataaaagc gaagatgagc aaaaagcata
    43141 tttgcaaaga tatgcaaata tgattgaata taacgaaggc actagcgata aagagctttt
    43201 tagttgggct agggcacagt gctatttggc ggcgcaaaat atgatgatgc aggccgcttt
    43261 tttaggaata gacagttgcc ctatggaagg atttgaaaga gataaactag aaagtgtttt
    43321 aagtataaac ataaaacaaa aaagagtagc tctcgtactt ccttttggtt ataggaaaaa
    43381 tcctgctagt aaaaaacaga gacgagatat aaaagatatc gtaaaatacg gataagtaaa
    43441 atatcgtggc agacgatcaa gaaaaaaccg aagaacccac cgggaaaaag ttagaagacg
    43501 ctagaaataa aggcaacgtc gcaaaatctc aagacgtgag cggttttgtg acgttactag
    43561 taggatttgc ggttcttgta ggacttatgg gatttatggg agagagatta gtaaatcttt
    43621 atctttacta ccaaggtctt atcggcgtag aaattactcg tgaactattt tttaagataa
    43681 ctatccactc aatgcttcag acgtttttga taattttgcc tatagctatt tgcattatga
    43741 tagcaggtat aatatcaaat ataatgcagt ttgggttttt atttaccgtt gagcctatta
    43801 tgccgaattt cagtaaaatc gatccgataa aaggtatcgc aaatctgttc tcactgaaaa
    43861 aacttattga tgctgttaaa atcatattaa aagtaagcgc cgtttttggc gttgcatttt
    43921 actttttctt gcagtttgta aaagagcttc ctcatactat atttttctca atgtttaatc
    43981 aacttttatg gcttaaagag aaaatgctta tattagctgg agttatgttg ttgctatttt
    44041 tgataattgc tatagcagat gtttttatcg tacgttatca gtacttcaaa ggtcttagaa
    44101 tgagcaaaca agaggtaaaa gatgagttta aacagatgga aggagatcca aaagtaaaag
    44161 gtcgcataag acaacttcag atgcaagcag caagaaaaag aatgatgcaa aatatcccta
    44221 ccgcagatgt cgtcataaca aaccctactc attacgccgt ggctcttcgt tatgataaag
    44281 agaaagaaaa agctccggtt gttttagcaa aaggcgtaga tcatctagcg cttcgcatta
    44341 gaaagatagc tacagaaaac ggtattcaaa tagtagaaaa tccgcctctt gctagagaac
    44401 tttataaatt atgcgatatt gacgatcaga taccgggaaa tttatttcaa gccgttgccg
    44461 aggtgctaag cttcgtttat ctcggcaata gggctaaatt tgaaagcaag ttaaaatagc
    44521 taaattgctg tttcaaattt ttaaaactag ttctaaattt aaaactagtt ttgagactta
    44581 ctagcttttc taagtacaaa atatccggtt actgcacaca tagtactagc taatagtata
    44641 gcgattttat ttgcgtataa aaacgcatca ctctcggcgt acgctaaacc atctatgaaa
    44701 aggctcatac tcataccaac tccggttagt atggacaatc catataaatg tagccatcca
    44761 cagccattag gaagctctgc taatttgcat tttatagcta aaaacgcaaa gctaaatact
    44821 cctatttgct taccgatgaa tagtccaaat attattccaa gcggcacggg atgcgttaag
    44881 tttaaaatag agtcttcgct aaacacgact ccggcatttg aaaaagcaaa tataggaagt
    44941 atcaaaaacg ctacaatcgg atgcaaaaag tgcattacgg actgcagcat tccatgctca
    45001 ggatctccat cttcatctcg taaaggtatg aacatacttg ctataatgcc agctagagta
    45061 gcatgaattc cgctcataag cacagatacc cacagtacga taccgcataa taaatagata
    45121 tatatgtttt gattattttt ataatttaaa atagttagaa taactatagc gcaaaacgat
    45181 ataaaaagag atattatgct caatgtttta gtataaaata tagctatgat gattatagca
    45241 gctacgtcat ctatgatggc aaggcttagt aaaaacagct tcaagctaat aggaattcta
    45301 cttccaagca aaaacaacac tgctaaagca aacgcagtat cgctaaccgt aggtatagcc
    45361 caaccattta catcaaaacg atttgcgtga tttagtacgt aaaagatgac cgccggaact
    45421 atcacgccgc cgattcccgc tatgctagga agagctactt tactaatcga gtttagttcg
    45481 ccttctaaaa actcgtattt aagctcaagt cctataaaaa agaaaaatat tgccataagt
    45541 ccgtcattta cccataaaat cgtaggcttt attagcttaa attcgccaaa aattataccg
    45601 gagtcaagtc ttaatatctc gctgtaaaat ttgtttaaaa caccgttatt agctaagata
    45661 agagccaata tcatagctaa tattatgagt ataccgcttg ctgattcctt ttgtaagaaa
    45721 tttttaatta tattcatctt tgacctttat ggtattattg gcaaattaaa ttaaaatata
    45781 tgtaaagtga tttaaatgcg tgatgtagct gaattttatc tggaatttat taacaaatta
    45841 ctaaaaatta tatatttttt taaatttttg taattgttga aatatagtta agtcgtggat
    45901 ataccgctac aatttataga ttattttata cgtttttaaa atattatact ttataataaa
    45961 tcacaattat atttaaacta aatttaaata taattaaata ttttataaat atatttttaa
    46021 atttataact ataaatttag atcaaatttt attagccggt tttttaaatt taaactcggc
    46081 taacgtaaat ttatttcaaa agccccatat cttttagttc gttttctaaa aactcacctg
    46141 tgaatgaacc tgttttttta tattttttag ctacttctat aggggttcct ttggccacca
    46201 cttttccacc tccagctccc ccctcaggtc ccatatctat cagataatcg cagtttttta
    46261 taacatcaag attatgttct ataactatga cggaatttcc aaggtctact aaatgatgta
    46321 gcacttttac tagcctatcg acatcggcaa aatgaagtcc tgtcgtaggc tcgtcaagca
    46381 cgtacaaagt gtttcccgtg tcgcttctgc tgagttcttt cgaaagcttt atgcgttgtg
    46441 cttctccgcc gcttagagtg gttgccggct gacctaaagt tacgtatcca agtcctacgt
    46501 cgcttatagt ctttagtttt gcgtaaattt tcggtactgc tttgaaaaaa gtaagtgctt
    46561 catcgacgct catatttaaa acttcggcta tatttttgcc tttatactct atctctaaag
    46621 tctgggcgtt gtagcgagag cctttgcaga tatcgcaaac cacgttgata tccggtaaaa
    46681 agtgcatttc tacttttatc tctccttcgc cgctacattt ttcgcatcta ccgcctttta
    46741 cgttgaaact aaatcttcct attttgtatc ctctgagttt tgcttctttc gtagaggcaa
    46801 aaagccctct tatctcatcc ataactccgg tataagttgc agggttgctg cgcggcgtac
    46861 gaccgatagg actttggtct agatagataa ctttatcgag atgttctaaa ccttctatct
    46921 tgacgccttt tatcttttgt acttttttag ctcggtttag ctcttcaaga gcagtcggaa
    46981 gtagggtttg aagtacgagc gagctttttc cgctaccgct tactcctgtc actccgacta
    47041 aatttctaag tggaaatttg acgtttaaat ttgatatatt gtttaaattc acactgctta
    47101 tactgatata atcgctttgt tttctgcctt tatagtaatt tatggatttt ttaccgttta
    47161 tatagtttgc cgtttgtgtg tttgatttta aaagcttttc gtaagttcct gcaaatacga
    47221 cttctccgcc gtgcactccg gctccaggac cgatgtcgac gataaaatca gccgcttcta
    47281 tggttttttt gtcgtgttcg actacgatta ccgtatttcc tttttcttgc aaatttctta
    47341 gcgtttttat aagttttaaa gtgtctcttt catgaagtcc gatactaggc tcgtcaagta
    47401 cgtacattac gccgctaagt ccgcttccta tctggcttgc gatacgaatt ctttgggctt
    47461 ctccgccgct tatggttcta gcgtctctac caagacttag atacccaagt ccgacgtcgt
    47521 aaagaaaaaa tagtctttcg tttatctctt ttaagatcgg tgtagctatc atcttttgtt
    47581 gttcgtttaa atgagtaaaa tttgagctat cgctaaaaaa tttagtacag tcttcgatgc
    47641 tcatatctat gatatcgcct atggttttcc ccgcgacttt gactgctaaa ctctcttgtt
    47701 ttaaacgctt ggcgttacat acttcgcact gtttttcggt catataatca ctaaaatctt
    47761 tatcatcttt caatatctca taggcgattt ttaagacacc ttcaaaagtt ttacttatct
    47821 tatgtctttt ccataaaaaa tttatatttt taacatttcc ataaagtatg agcctttttt
    47881 cgtcttcatt tagttccccg taaggagttt tggtatttat accgttttgt tcgcaaaaag
    47941 caagcgtaaa tttataaaaa taactcttgt taaatccgta catcactttt atggcgcctt
    48001 gttctacgct gagattttca tcgatgattt tgtttagatc taagctaaaa cggattccaa
    48061 gcccgtcgca gctaggacaa gcgccttttg gagagttgaa gctaaagctt aggggttcaa
    48121 gagcgttaaa tgatatttta cagtcaaaac aagcgttatg ttcactaaaa tgtattaagc
    48181 ttttttctaa atttagctca ctcgcattgc ttatatcaat ctctacttca ccaaaacttt
    48241 catgaagcgc tttttcgacg tcgcttgcta tccttgaaga gttttccttg cttacaacta
    48301 ctctatctat cacgactttt atggtgtgtt ttttggtttt gctgagttct atctcttcat
    48361 ctagtcttac catgactcca tctatcatgg ctcttacgta gcctttgttg gctaattttt
    48421 ctagttcgtc cgcgaaactt cctttttttt cacgtaccat aggagctaag atcgtgattt
    48481 tagcgccatc aggaagcttt gtgatctgat ctatgatatc actcgcgctc atttttgaga
    48541 cgattttgcc gcatttatgg cagtgttgaa ccccgatcct agcgtataaa agtcttaaat
    48601 aatcataaat ttcagttata gttcctacgg tagagcgagg atttttactt gtcgattttt
    48661 gatcgattgc gatagctgga gtaagacctt cgatgtgatc gacgtctggt ttccctatgc
    48721 ggtctaaaaa ctgtcttgcg taagaagaaa gactctctat atagcgtctt tgaccctctg
    48781 cgtaaagcgt gtcaaaagcg agcgagcttt ttccgctacc gctaagccca gtaaatacta
    48841 caaggcggtt ttttggtatt tctaagctga tatttttaag attgtgctct ttcgcacctg
    48901 ttatttttat agtttcattc ataacttgtc cattaaattt aaaatcaatg attatatcaa
    48961 aaattgtttt aatcttaaag aaatgagaaa aaatctaaat ttaaaaatta aatttcaaat
    49021 aatttttata tttgcatatt aggtgttact tttattcaca tatttttcaa aataacataa
    49081 atttagttga aatttacaac aaactaattt tattcttatt aatatgtgta tgttgataaa
    49141 atattatgag gaggttatat ggcaaatcca aacattcctg tggataaaaa gaccagtact
    49201 gttcagatta tcggtctttt tggtggtatt ttggctgctc ttttggtgta ttatatgatg
    49261 ccaagtagtg ctggagatat agcaaacgcc gctgcaaacg gcaaaaagtt aaatatagaa
    49321 ggtcttccta tagtagctgc tgtggctgtg ctgatgggta tatggtggat gagcgaggct
    49381 atagcacttc ctgctactgc tcttttgcct atggttttgt ttccgctttt aggtgtcgat
    49441 agctttaaat cagctgcggc tccgtacgct tcagatacta tatatctgtt tatgggtggg
    49501 ttcgttttag ctcttgctat gcaaaagtgg aatctgcata ctaggatagc tcttggtatt
    49561 gtgttactaa tcggaacaag tccgcgccgt ttggttgctg gatttatggt ggcgaccgga
    49621 ttcatgtcta tgtgggttag caacactgcg accgcggtta tgatgcttcc agtaggactt
    49681 tctgttttgc acttagtcag taaacttact accggtaagg atgacggtac agtggagggc
    49741 gatatgagac atcttgatga gatagctcgt aaaggcactc aaggcggtat agcaagtgct
    49801 gtgatccata aaggtaaaga tatagtagaa gaagtaaaag caagaacaag ctcatttact
    49861 tcaaatttcg gcattgcctt aatgctcggt atcgcttacg ccgcttctat cggctctctt
    49921 ggtactatca taggaactcc gccaaatgca cttcttgtag ctcatatgaa aaacgaattc
    49981 ggcgtagaga ttggttttgg ccagtggatg ataatgggcg ttcctttagc cgtaactatg
    50041 cttgctattt gttgggctat acttgtttat tggttatttc cgcctgagat agacgagata
    50101 ccaggaggta aagaaatcat tcatgaagag tacaaaaaac tcggaaatat gagcagcgct
    50161 gagtggctag taggtggcgt gttcatatct gctgcgcttt gctggatatt tcttggtttt
    50221 atactaaaag catatgggat aaaagtaggc agtcttgata cgatcgtcgc tatgagcgtc
    50281 gctgtattgc tctttatcat tcctgcaaac aaaagcggag agagacttat agactgggat
    50341 agcgctaaga aacttccgtg ggatatcctt atattattcg gtggaggtct tgcactttct
    50401 gctcaattta gcaaaacagg attatcttta tggataggac atcaagtttc ggctttagga
    50461 actatgccta tacttgctgt tatagtggca gttaccgctc ttgttatatt cttaacagag
    50521 atcacttcaa ataccgctac tgcagcggcg ttcttgccgg ttatagccgg ggttgctata
    50581 ggtttaggat atgagggaag caatgttatg ctatttacgg tgcctgttgc tttagccgct
    50641 acttgtgcat ttatgctacc tgtcgcgact ccgccaaatg ctatagctta cggctcggga
    50701 tacgtgcgga tcagcgatat gataaaagct ggattatggt taaatatagt aggtatattc
    50761 ttgataactc ttactgttat gttcttgact acgactgtat ttggtctaaa gatttaattt
    50821 aattttcttg gctaaattac tagccaagaa aaatcttttt tatagttagc aaaaacagta
    50881 tcatattaaa tcctaaattt agtcgttttt gttttgttct gtctattttt atagatgcgt
    50941 ttgtaccaaa atatactcca attatcgctc ctataccaag cgcaaatccg tgataataat
    51001 caacaagtcc gtttatacta aggcttataa atccgctaac tcctgcaaaa actacaaaaa
    51061 atagccccat agataccgct tttttgatat catatcctaa aaatccaaaa aatataagac
    51121 ttataagcat tcctccgccg attccgacgc tgacacccat aatgccgaca aaaataccta
    51181 ttataataag tataggttta gatagttttt tctcttcgct agcaaaactt tttttaataa
    51241 aagcctttat gatcataatg aaaagcagac tagcgaacat acattctagc cataaagatg
    51301 gggtgtattt gactataaat ccgcttaaaa atgcaccaaa tataccgccg attcctacgt
    51361 aaaatccttc tccaaattta aacatacctt ttttatagtt gatatatgaa ccaaaaagtg
    51421 agctaaatat catctgcatg actgatatgc caatcgcgta tttgatatcg tatcctaaaa
    51481 atacaagtac gcttacgata attccgccgc cgccgatccc gaaaaatcca gacgcgaatc
    51541 ctacaaaaat accaaaaaag ctaagtagca aaaactcact catatttagt cctaactttt
    51601 aaatttaaaa aaatattttt ttcaccatca acccaaacat agatatataa agtgctacaa
    51661 gccaccattt ttgagcttgc ttgtctattt tatggctggt tttcgtacca aaatatacac
    51721 cgatcaatga tcctaccgct atcaaaagtc cggctttata gttgataaga tcatgaaagg
    51781 caagacttac aaaaccagaa atagaactaa aaagtacaaa aaatagactt atatatactg
    51841 attttttgat atccattcct aaaaatccta ctaaaatagg agttaaaagt attccacctc
    51901 cagctcccat agatatagcg attactccgg taaaaaatcc gactataaat aagatatatt
    51961 ttggagggtc ttttggttta gcggctgtat ttacatagaa aaattttgat atagatattg
    52021 ctaaaattat gagcaatccc cactctaaaa ctctttcttg tatatttgat actacaaatc
    52081 cggataaact agctcctaca aatccgccta atccaactat aaatccgtct ttgagaatga
    52141 aatttgagct tttataattt ataaagctac caaaagtagc acttaaaacc atttgaagta
    52201 tggatatgcc tatagcttct ttgatatcgt atcctaaagc gagcattata ggtactaaaa
    52261 ccgttccgcc gccgatcccg aaaaatccag atatgaatcc tatcaggatg ccaaataccg
    52321 gaagtaagat catgctatcc tttcaaattt gaattagaaa ttgtatcagt ttagatataa
    52381 aacattgctt actaatgata gatagtttta aatttaaaaa tataaagtac aatgaagtat
    52441 ttctatttca aaggataaga atgaagaaaa ttttaccttt agcaagccta cttgtaggat
    52501 ttgcatttgc gggagataag atgttagtta ctggatttag tccgcttgga gtcgatgaaa
    52561 ctgcagctaa attgcaaaat attttaaaag aaaaaggtct taaggtattt ggtgtgtttg
    52621 aacactctaa gctagcaaaa gaggtaaatt tagaaatgag ggatactgtt gtagtcgctt
    52681 ttggagcgcc aaaagcagga actccgctaa tgcaatgtga accatcaatc gctcttgaac
    52741 ttccgttaaa aatggtgatt tataaagata acgactcaaa aacagttgtt gcttatagag
    52801 atatcaaaga tatagcaaaa agttacggtg ccaactgtga tgaagtggta aataaactaa
    52861 gcgcggctca atcaaacttc tttaaagcta ttactaagta atttgctctt ttatcctaaa
    52921 atttagattt tgggataaaa tttcttatac ctaaatttaa attttacaaa tttacggata
    52981 aaatcactaa aaaatagacc tcaagtatag ctataaattt aaatttgtac tttaagatag
    53041 acaaagaaaa aattctgtat aatatttttt taaaaaaact tttggagcca aaatgctttt
    53101 acaagaacca gtcgtatacc taagagagat tttaagcagt tatccaaact catatttagc
    53161 agaagataca actcaagcta taataggcat agactgtgaa tacatctggg gcgacgatct
    53221 tagtaagtta aaatttgctt atgaaaacgg aaataaaatt tgcgattttg caggactgtt
    53281 tggcgtgatg ggttatgacg tggtttataa atttgaaaat atcggagata aaaaagagtc
    53341 tatttacgag tttccgacat atttttatgc agacgcaaaa gcgtatttgc attatgataa
    53401 gcagagtaaa atttatagtt tttacggaaa tgatgcgtat ttttcaaatt taaaagatgc
    53461 gaaacctcat aagcccgagt ttaaaaatgg attttacaaa gtaaatactg atctaaattt
    53521 agaaaaagag cattttaaaa atgctataaa gaaagctaaa gagtatataa aaaacggtga
    53581 tatttttcaa gttgtattaa gtgaaatttt agagcttgag tcaaatttaa aagcgcttga
    53641 tttttacgaa acattgaaag taaaaaaccc aagtccgtat atgttttatt ttcctacttt
    53701 atttggcgtg gttgcaggaa gcagtcccga gcttgtaatg cggataaaaa aaggcgagat
    53761 ttttgccgct ccaatagccg gcactagggg cagaggtaaa gatgcaaacg aagatgaagt
    53821 cctaaaaaaa aatcttttga gcgatgaaaa agagcttagt gagcataaaa tgctgataga
    53881 tctagctaga aacgatatct caaagtttgc caaacaaggc agcataaaag tcaaaaatcc
    53941 aatgcacgtg gagtattttg aaagcgttat gcatatagta agtgaagttt atgggcaaaa
    54001 aagagacgat aagagtgctt ttgatgtttt aagcgtggtt tttccagcag gtacgcttag
    54061 cggaagtccg aaaattcgcg ctatgcagat tattagcgaa ttagaactta gctctagagg
    54121 tatttatggc ggaggaatcg gattttggca ttttaacgga gatgttcaga tggcgattct
    54181 tattcgttcg gctattttta tagctaaaga tgatgaaatt tcaaaggttt ttataggtgc
    54241 cggagccggt atagtatggg atagcaattc tgaaaatgag tattccgaga tatgtaaaaa
    54301 acgaagaagc tgcgtaaaag tttttgagca aagctgtaag gaaatacgat gattttgatg
    54361 atagataact atgatagttt tgtttataat atttatcagt atattttaga aacaacagat
    54421 gaagaaataa ggtgcgtacg taacgatgag ataactatag acggtataaa tgctttaaac
    54481 cctagtaaaa tcatcttaag tcccggtcca aaacatccaa aagatagcgg cgtttgtctt
    54541 gatatattaa gttcaaattt agatattccg attcttggaa tttgccttgg tcatcaagct
    54601 atcggtctta gttttggtgc tgatataaaa agattagaaa atcctatgca cggtaaaagt
    54661 agcgttataa aagttgtaaa taatagcggt atttttaagg agttgccaaa tgaatttaat
    54721 gttatgaggt accactcttt atatgtggat aatattcctg aatgccttga aataacagcg
    54781 tttagcgatg atggaattat catgggtttg aaacataaat caaagcccat atacggtatt
    54841 cagtttcacc ccgagagtta ttttaccgag tacggaaaga agattataga aaattttgta
    54901 aatttaaata agccaaagac aaaggagaaa gaagtggttg attttgctcc atttatgaca
    54961 aaactacaaa aaggatttcc tctagaaagc ggagattatg aagttatatg caaagagata
    55021 aacgataaaa attatgatat agttcagctt gcaggacttt tggttttgat aagcgaaaaa
    55081 tctctttatc ctgatagcct tgccgctctt gttaaaaata tacttaaata ctcgattact
    55141 tatagcgaca ctacgccgat gtttgacatc gtaggcaccg gcggtgataa attaaaaacg
    55201 ataaatatat cgaccacggt ggctttcata ctagctagca tgggcgttaa agtcgcaaaa
    55261 catggcaaca aagccatcac tagcaaaagc ggaagcagcg atttgctaaa tacccttgga
    55321 gtatcgttaa acagtgatat aggagagtta agagagactt taaattcaaa aaatttagca
    55381 ttttttcatg ctccgttttt tcacaaaata acagccgagg taaaagaagt aagaaatcgc
    55441 cttggtatag gaacggtatt taatatgcta ggtccgcttc ttaatccaaa tttaaatctt
    55501 actaatcaaa tagccggaaa ttatcttgaa gaggtaaatg agcttatggc tagaacgctt
    55561 ttaaatttag gtaggaaaca tgctcttgtt gtacacggta tggacggtat ggatgagata
    55621 acgctttgtg atgaaactct tattcatgaa gtaaaagacg gtaaaatatt agaatacagg
    55681 ataacgcctg aacaatttgg atttacaagg gcttttcacg ccgatataga gggtggagat
    55741 gctgaaaata acgctaaaat atttgaatct actataaaag gcgaactaag cggagctaga
    55801 tttgatatag ttctcataaa tgctatgttt ggtctgtatg cggctgattt tgtaagctct
    55861 cctatggatg caaaaccgct catacttgag gctctgcgtt ctggtagggt atgggaattt
    55921 tataaagatt atatcggcaa atgaagataa aaatttgcgg catcaaaacc cttagcgaag
    55981 ctaaaagcgt ttgtgagtgt gaattgaacg gtgttagagt tgattttata gggcttattt
    56041 ttgcagatag taaaagaaaa gttagtatcg aaactgcaaa agatatatca aatttagctc
    56101 ataaatttgg tataaaagtc gtaggagttt ttgcgggaat taaatttgat gagataacta
    56161 aaatagtaaa atttgcagat ctggatgcag ttcaaattta tgaaaaaata gaagataaaa
    56221 ctaaattggg ttgtgaagtt tggcaggttt ttagcgtagg agagaatttg cctgatctgc
    56281 aaggaagtta tgataaaatt ctttttgata cacaaggtgt tttaaaaggt ggaaacggcg
    56341 ttaaatttaa ctggaattta ctccagggtt tagacgctaa atttgggtta gccggaggaa
    56401 tcggcgtaga aaatttaaga gacgcgatga agcttaagcc aagttttgtt gatataaata
    56461 gtcgtataga agatgaaaac ggcataaaag atagtgataa aataatggaa attttaaaaa
    56521 tagttagttt aggagattta aaatgaatgt aaaagcgtat tttgggaaat atggtggtca
    56581 gtttgttccg gagactgcta tgaacgctct tttggagctt gaagaagctt atgagagcat
    56641 agcaaatacc aaagaattta gagatgagtt agattctctt ttaaaagatt atgtcggcag
    56701 accaagtccg ttgtatcatg caaaaaggtt aagcgagtat tacggtcacg aaatttatct
    56761 caagcgcgaa gatctaaatc atactggagc tcataagata aataatgctt tagctcaagc
    56821 attgctcgca aaaaaaatgg gaaaaagaaa ggtgatggct gaaacaggag ctggacagca
    56881 cggagttgcg actgcgactg ctgctgcact tttaggttta gaatgcgacg tatatatggg
    56941 agagtgtgac actaaaagac aagcgttaaa cgtctataaa atgcatcttt taggagcaaa
    57001 cgtagtaagt ataaccgatg gtttggctac tttaaaagaa gctaccaccg cagctattca
    57061 agcatgggta aatgagatag aagcaaggtt ctatgttata ggctcagcgg tcggacctca
    57121 tccgtatcca aagatggtta gggattttca aagtgttata gggcgcgaag ccaaagctca
    57181 gctaaatgaa aaaggagtga aaccagatta cattatagct tgcgtaggcg gcggaagtaa
    57241 tgctataggt atattttcag catttttggg tgatgaaaac gtgaagataa taggcgtaga
    57301 agccgcaggt ttaggggctg atactcctta tcacgcggct actttgacaa aaggaaaaga
    57361 cggtataatc catggtatga aaacagtggt tttacaagat gagtacggaa gaattttgcc
    57421 tgttcatagt ataagtgccg gacttgatta cccaggagta ggaccagaac acgctcattt
    57481 aaaagatatt aaaagagtag aatactacgc agtaagcgat gatgagtgta taaatgctct
    57541 taagctttgt acgcgcttag aaggtataat acctgctata gaaagctctc acgctttagc
    57601 ttatcttgaa aaactctgtc cgaatttaaa aacaaaatca aatatagtca taaacgttag
    57661 cggtagaggt gataaagata tgaatactat aatggagtat aaaaaaggaa caatatatgg
    57721 ataagataca aaaagctttt gagggcaaaa aagcaaatat aggctatata gtcgccggat
    57781 acccaaattt agaatacaca aaagagtttt taaatttact tgatgagagc tgtcttgata
    57841 ttatagagat cggaattccg tattctgatc ctttggctga tggaaaactc ataagtatgg
    57901 ctagttttag tgcgtgtcaa agtggagtta ctacagacac tgtttttgat atgcttaaag
    57961 atgttaaaac ggataaagct ttggtatttt tagtctatta taatctaatt ttagcctatg
    58021 gggaagataa atttttagct aaagcaaaag aggttggtat aagcggattg atagttcctg
    58081 atatgcctca tgacgaaagt agtgaattta gagttaaaac ttctaaattt aagctttgtt
    58141 taatacctct tatcagccct acgtcttcta aacgcacaaa agatatatta agtgatgcta
    58201 acggatttat ctacgcagtc ggctctcttg gcgtaactgg aggtgagcaa agtccagtag
    58261 ataggctaaa agatatgata aaagatataa aaagctctac ttcattgcct gtagccgtcg
    58321 gttttggtat caaaacaaat gaggatgtga aaaaaacaaa attatatgcc gacggtgcta
    58381 tagtaggcac tgagatagtc aaactcacaa ataagtatag cccaaatgag ataaattatc
    58441 atatagaaga gatattcaaa aaatagtcgt ttcgactctt tttttgtagt aaaagtttaa
    58501 ttttaatagg tttaaatttg aaatatttca aatttaatac attatatttt tatttgaaat
    58561 ggttttttca ataaaaattt agtataataa ctaaaaaagc taaggagtaa ggttatgatg
    58621 agtgctgtgt gctatgctac taagcatttt tgcactgata ctttggggtt tgagctaaaa
    58681 gatggaagta agcttggcaa agatgtttat ggtgctagta ttcctgtgta taaagataat
    58741 gaagagtatc aatttttctt atattttaaa agagatacat tgaagtattt tgcaaaagtt
    58801 ttattaaacg tatctgatga gaagcatgtt gatttaggcg atctttcaag agaagttgca
    58861 aatcaaataa taggttatgc aaaaaattta ttaaatgata gacatgatgg aaaatataaa
    58921 ttaggtactc cggagttttt aggtaaagtt gaatcctttc cggtaaaact agcagagtcg
    58981 aaacttttta aaatgaaaaa tagaacattt aaaataggct ataaaaaagc atgagcgatg
    59041 aagaactaag cccaaacgga ctctttcacg gatatgacga actccttgat ataggagttg
    59101 agtttataag tgagctagga actacgtcta taaccgtaaa agagctttta aagctcgaag
    59161 taggatcggt tatagactta gaaaaaccag ccggagagag tgtggagcta tatatcaata
    59221 ataggatttt tggcaagggc gaagttatgg tttatgagaa gaatttagct atacgtataa
    59281 atgagattct tgattcaaaa tccgtaattc aatactttaa aagagagttg ttatgagatt
    59341 tataattctg ttatttgcta ctttaccgtt atttggtgtg aatttattaa cttataatat
    59401 atatgaaaga ggcgatcgag tagatataat gctcagtttc gattctcctt atgacggtag
    59461 tattaaacag caagtagcag gagataaaac tagtcttata ctgagtgatt taaatgttga
    59521 agagcagata gataagagta taaactcatc aattttgcaa aatattttta tatcatcgcc
    59581 taataagctc tcaacgctag ttgaattaaa atcaaatttg cctatagcta taacagcttc
    59641 taaaaccccg gataaatttg gtcttagaat cagagttgca aatatcaaaa caaatcaaaa
    59701 tcaagcagct ataccatcaa atatacagac aaaagacaat accgtagttt ctgccgatat
    59761 cgactcaaga tatatttccg tgatagttgt tttacttata ctatttttca tatcttttat
    59821 cataaaaaag agattagcga aaccgaaaaa tgatatttta tttactatag gagataatat
    59881 agataaaaag ccgattcagc caagtgagcc aaaagagccc ataaagcaag atatcaatag
    59941 aaattccgcg tttagtgttt ctgatccttc accaacaaag accgaggaga taaaaactcc
    60001 gtcatgggag ctaaaaacag atgatggcgg cgtagaagtt atatatgaaa aaagtattga
    60061 taatacaaat aaagttactc ttttaagcta tgaaaataga aaatacttag ttttagtcgg
    60121 cagttcaaat gttcttttgg ataaatttgg agaagataaa atacgagaca aagaggactt
    60181 tgaagtattt tttgaagaaa atagacaaaa actcggtaga tatctagaag atagaaaaaa
    60241 ttctcttagt agctataaag atatgatgag caaagagtaa tttttaagat gctaaaacag
    60301 atattttaaa atactaaatt caatatccgt ttagaatttc tgctatcttt ttagcgatat
    60361 tttcgttgaa attcaaaata gttctatctc tatcaaaatt tatcggtgat ttttcacttt
    60421 ggatgtttaa attcgtttgg tatgaactac cgtttttgat atttataaaa agcgatactt
    60481 gtgagtcata aaagtactcc gtatcaaagt agtcatcatc aaaactatgc aaatacgaaa
    60541 atcctatccc gcgactcata aaatgtcttc ccattccaaa attacttcct ataaagaaat
    60601 ttgaatttgg ttttacggaa ctattttttc taaagtagtt gatatttgct tttatatgta
    60661 tgttcgagtt gtttaaatct gatatttcat agccgttttt aaccaattca aattttataa
    60721 tatcagttag atttccctct gagtttctag tttgtatatt tacttttttt tccgatagtt
    60781 tatctgttat aaatagaggc gagctagtcg acacgtatac gttttgtacg ctattagcac
    60841 aacctatgat ggaaaaaagt ataattataa aaaatggaat ttttttcatc caaatccttt
    60901 ttttgttaat tatactattt ttttgctatt ttatggttaa tataatacac caaaaacagc
    60961 actgtaaagc tgatagctag catcactcct gagtatatat gagccaaatc gtagtccaaa
    61021 agttcaacag cgtcataaat cgcaatactt gcaactttag tttcgcctcc tatacttccg
    61081 cctatcatca aaacaacgcc gaattcgcct aaagtgtgag cgaaacttac tataaaagct
    61141 gttagcaaag atggttttat atttggcata gctacataaa ttaaagtttt aaatttgctc
    61201 tttccaaggg agtaactagc ttctataagc gagttcggca tagatttaaa tcctgctaaa
    61261 agaggctgaa acataaacgg gagagagtat acgcaacttg ctatgataag tccagtgaag
    61321 ttaaaaacaa gtctgacgtc aaaatttgct tcaagaaatt tgcctaaaaa cgagtatgga
    61381 gatagaaaaa ttaacatata aaatccaaga accgacggtg gaagtactaa aggaagcgat
    61441 atgactgctt caaccatcgg tttggcttta aattcagttc ttgcgattat gtaagcaagt
    61501 ggaagagaaa aggtaaaaag tattaaactt gagataagag ctaacttaaa agatagtaaa
    61561 aacggtgtcc aatctatcat tttatacctt ttatcgatat tttaaatgct tttgcactta
    61621 gagttactat atcgcccgtt tttaaattta aaacttcatt tttggtaaga actacttcgc
    61681 ttatttgatt tgcgcattct gctataacaa catagatcgt atctcgtttt tgaatttcta
    61741 gtatttttgc gtgaaaacta aacttttgcg agccagatgg ttttaagaaa atctctgatg
    61801 gcgtgcctat atttatcatc tttccattgt ttagctcata tactacattt gctaatttat
    61861 aaatttcacc tacatcatga cttactaaaa ttatagtcat accaaagttt tcatgtattt
    61921 ttaggagata atcttgcaat ttttgtctta tttcattatc caaagccgaa agcggctcgt
    61981 cgagtaacaa aatatccggt tttctcatca aagctctagc aagcgcaacg cgctgttttt
    62041 gaccgcctga aagcgcattg atgcttgagt ttttgtgttc atcgagccct gctaagttta
    62101 aaagttcatt ggcaagtttt ttgtcattat ttgcaaataa aagatttttt atcacgctca
    62161 tatttggaaa taatgcgtag tcttgaaata gataaccgat atttctcttt tgcggttcta
    62221 aatagtagtt tttatcacaa tatactaaag atccgttttt tatatatccg ttgtctggtt
    62281 ttaaaaatcc tgcgataatt cttaaaatag tagttttacc gcttccgctt ttaccgtaaa
    62341 aagctacaaa atctcccttt tttatctgaa aatttacatc aagatgaaaa ctgtcgctaa
    62401 gagatttttg acaagagata tctatcataa aatttcactt atataaagag atgtttcatt
    62461 caaacaagcc caaatttcct ctcctatttt aaactcgttt atcaaatttg agcttaatac
    62521 ggtttcaaag ataaatccat ttgagttcaa atttattgta gatattattt cacctgcatt
    62581 gatatttgtt atggagacac aaaagttatt tctagtgcta atttgtttgt gagaagatag
    62641 tgctatatcg ctatttttaa aaccgagcaa tacttttgag cctattttga tatcatcttg
    62701 cagctcaagt ccgagcataa atagctcacc aacttgcgat gaaaatttta tttcacacac
    62761 ttgatgagct atttttatct ctctaacgac tgcttgcatt aaaattcata gccgtatttt
    62821 gcaaatattt ctttaccttt ttcccccaag ataaagtcgt aaaaatcttt agcaagttta
    62881 tttttctcgc cgttttttaa tattactata ccttgatcta ttgttgtata aagtttgcta
    62941 tctactaaat taaactcttt tccttctttg tactcagcca tttttgggct gtacatagcg
    63001 ctagctgcta caaaacctat atcgccagct tttaaagttt gacttagagc ttcgcctata
    63061 cttcctgctt ctactatttt atcttttata gcgtcataaa ttcccgcatt tttaaaagcc
    63121 tctatactag cagccccata aggtgcagtt tttggatttg ctatcactat agttttgatt
    63181 tttggatctt ttaagacttc taaacctttt gtcacatcaa atccgcgtac tgatagcata
    63241 gcaactttac cttttgcata tataacagcg tcatttagtg caaagccatc tttataaagc
    63301 gtgtttgcat agttcatatc tgctgacata aatagttcaa acggagctcc gttttttatc
    63361 tgagcaacta gctttccgct agatcctaaa cttacgttca aattcgcatc cggataaagt
    63421 tttttaaact ctttttttat atcttcaaaa gcgtatgttg tgtttgcagc tgcagccacg
    63481 tttaactcac ttgcaaaacc gactatgaca aaagcgacga tgagcagtaa ttttttcatc
    63541 cattctcctt gatatttaaa atttatatgc gaaattatat cataaaatag tattttttag
    63601 catataaatt atatatttat atttaatttt aaatgattgt tttttaagtt tagagattag
    63661 cggagatatc tccgctatgt tttaagctcc tattaaaata ttactagctt tgataaatac
    63721 taaaatatca tcacctacat tgattctcat atcttgagca gattcatttg ttattatagc
    63781 tgtgattttt tgttgatcgt ttatttctat agtaatttcc gcatttactg ctccgagctt
    63841 cgcctctgta actttacctt tgatcttgtt tgcagctgat atctttatat ctttttctcc
    63901 atcttgtttt ccaagtacta cgctaggggc tttaaatata aaaagaacct cttttcctac
    63961 ttttagtcca agatcttttt cactctctac tgttatagtt gctcttagtt tgtttccatt
    64021 gctaagtttg gcggttattt ctgaatttac cgcgcctgtt tttatatctg ttatctcaac
    64081 taaaagttga tttctagcac ttaatttcat attcatcctt tgtaggttgt tgattatatc
    64141 ttcatttata tcttcatttt tacaaatttc atctaggaaa attttttgag cttttagtat
    64201 aacttcataa gtttttataa gctttttagc gtaatcgcta agctcgctac cgctattttt
    64261 tctatttccg tttactctta ctattaatgg aaatttagaa cgattattta aaaaatcaag
    64321 cgagtcccat gcatttttat atgatatatc ttcagcttga gcagctttag taatactttt
    64381 tgttttttct atggctttaa gcagccttat atgtttttct agtatagccg tgtcgctgtt
    64441 taagaataat tctaagctaa catctgcttt catttcttta cctttttata aaattgcttt
    64501 ttggtatttt atacttattt agcaaatggc ttgtaaatta aaatgaccta aattttgcgc
    64561 ataaagttat tttattaaaa ctaaaggttg atttatataa aattgttccc actattgtgg
    64621 tataaattgg agttttatga gatttcttat ggcggttttg ctgttttttc atatatcttg
    64681 ggctaatgat atacagatgg attcatttga agatgagttc aaaagcccta gttttattga
    64741 tcctctaagt ggatataata gagctatgac gaatttcaat gatatgattt ataaaaatat
    64801 ttttattcct acgtttaaag gttatgattt tattattcca aatgaggctc aaatggcgat
    64861 cagtaacttt tttgataata tactttatcc gcttagattt gtaaataata ttttgcaatt
    64921 taaatttaaa aatgccggtg aagagactct taggtttata gctaatacca tagttggatt
    64981 tggcggtata agcgacgcgg caactaatgt ttatggttta gccaaacatg atgaggattt
    65041 tggtcagact cttggatatt ggggagttgg aagcggtttt cctgttgtct tacctatctt
    65101 tggtcaatca aatcttagag atatgtttgg tttggtagga gattgttacg ctagtccgat
    65161 aacatatatg aacgtatggt gggcaaaaga tagtaaattt ataaatttcg ccgcattcac
    65221 attccaaaaa gtaaatgaag gttcaaaaga tccggaactt tatgagagaa ttataaaaga
    65281 tgcgatagat ctttatccat ttatcaaaaa tacatatgag caaagacgag atgctcttat
    65341 aaaggaatga atttgagaaa atttatattt ttaaatttaa tattttttag tttaggattt
    65401 agtttagagc tttcacagat agagccggtt atgagagaag atcttaaaaa agcagtttta
    65461 gttatgcaaa ataaggcgat atctgaagcc gataaaccaa aaaagatgtt cgagctattt
    65521 gatgggtatt ttgactatga tcttatggca aaactcgcac tttcaaaaca gtataaaact
    65581 cttgataaag aacaacaaat tcagtttaaa aacgtgtttg aaaaaaagct caagcagtct
    65641 tttacggata aacttgctta ttataccgat caagttatag agatacaaag tactactatg
    65701 ccaaataaaa atagattttt tgtgaattcg attatcgtaa atgaagcaga taaatataac
    65761 atagttttta aatttcaccg tgctagcggt gataattttt tgatttatga tgttgatata
    65821 ttgggtgtta gtattattca aacttataga tctcaatttg aagatttaag tcaaaatgta
    65881 agctttgatg atattttaaa acgtttagag gttactagtt tgttagataa caatgaaacc
    65941 aaagccaaat aatgaaaaaa gcctttaaaa cagttgttgc ttttccaaaa actgttttaa
    66001 cattaagcat tattatctgt ctgtttttcg gatattttac aacgaaactt gaaatagacg
    66061 cttcaactca gactctgctt ttggaaaacg atcgcgaact ttttgtttat agagaagttt
    66121 caaagagata tgaaacgcct aattttttag ttgccgctta tactccaaat aatgatcttt
    66181 tatcggataa aactcttgaa aaaataaaaa taatatccga cgaactagaa aaaattaatg
    66241 gtgtaattag cgttttttct atactaaatg cacctctttt gcaaaatagc aatgtccctt
    66301 taagtgatct tataaaacat attccaaatt taatggataa agatataaat aaaactgcag
    66361 ctaaaaatga atttttaact agcgcacttt ataaaaatag tctagtaagc agcgatttta
    66421 gtacgactgc aattgttata aatttaaaaa caaatgaaaa atataatgaa tatatacaaa
    66481 aaaaggattt tttaaattta aaagataaaa acggtactat aaataaatat gaaaagcaag
    66541 aactcctaaa tttaaataaa gaatttaaaa tttatagaga tgaacttcgc gaaaaagagc
    66601 atgaaaatat agagaatata aagagcgttc tacgcaaata tagcggcgat gagaagctgt
    66661 ttttaggcgg tataaatatg atagctgatg atatggtagg atatgttaaa aacgatctta
    66721 tcacatacgg tattagtgtg ctgcttttgt tgatattttg tttgtggtta ttttttaggc
    66781 aaattagatt tataattata cctgttttag tatgtttttt aagcgtagtt tcggcgagcg
    66841 gtatttttgg attttttggc tatgaaataa cagttatcag ctcaaactat gttgctttgc
    66901 agcttataat tactatttct gtagttatac atctgatagt cgcgtataga gaactctatt
    66961 tattacatcc aaaatatact caaatacagc taatttatct tactttgcaa tctcgtgcaa
    67021 atccttgttt tttcgctatt tttacaaccg ttatcggatt tttttctctt tgtttgagcg
    67081 atatcaagcc tattattatg cttggcgcga tgatgagttt tggcataagt gtatcattga
    67141 taatatcgtt tgtagttttt ggaagtcttc tcgttctttt gggtaaaaaa gagcctaaaa
    67201 gaagttttga aaatagtttt aagcttacta tttggtgtgc tcaagctgcg attaattata
    67261 gaaaaacaat atatttagtt agttttgtca ttgttatggt cggaatttac ggaattgctc
    67321 aattaagagt agaaaatagt tttataggat atttcaagca aaataccgaa atttacagag
    67381 gtatggaggt tatagataaa aaactcggtg gaacagttcc tcttgatata acaattaaat
    67441 ttaaagatag ttccgcttta aattcggatc atcaaaatga tattttagat gattttgaaa
    67501 gcgagtttaa tgctaaagta ggtgatcctg aatactggtt ttcaagctat aaaatggata
    67561 tagtgaaaaa ggttactaaa tttttagaag atagaaattt tataggaaac gtaagctctt
    67621 taggcactct tttagaagtc ggcaaaaact taaacggcgg taaagagtta gattctctta
    67681 gcttggcgat tttatacaat gggttgcccg ataagtataa aaaagtttta ttaactccat
    67741 ttgtgagcat agaagataat gaagttcatt ttgtgattag aactattgat agtgatgaga
    67801 atttaaggcg ggacgagttt ataaaaagct tgaaaaaaga tcttgaaatt ttgcttgcta
    67861 atgatgaagt gagcgctaat gttagcggcg ttatggtgct ttataataat atgcttcaaa
    67921 atttattttc ttctcaagta gatacgtttg tttttgtcgt tttagctctt tttatcgtat
    67981 ttgtttttat atttaagagt ataaaactat ctattatcgg tattgtttca aatttagttc
    68041 cgctttgtat ggtttttgga gttatgggta tagcaaatat tccgcttgat ataatgagta
    68101 tcacgatagc tgctattagc ttaggaatcg gtgttgatga tataatccat tatatccata
    68161 gatacaagat cgagataaga acaaaagata aaatagaagc cataaaatca agtcatgcta
    68221 gcatagggta tgctatgtac tatacctcat ttgccgtatt tttaggattt agcgtgatga
    68281 gttttagtaa cttttggcct acgatatact ttggagtttt aacagatctt gttatggtga
    68341 tgatgctttt gggtgcttta gtattgcttc cagcgcttat actatcattt cattctaaaa
    68401 ctatcaaaaa agagtaaatt tctctgacgt tttttgtatg catagcatac caaatagctc
    68461 ttttttcttg ttctatttta tctactactc cactaaaaac tacatcgcat tgaactacgc
    68521 ttacgcctat gtttgttcca tttataagac tatctgaaaa tagctctttt ttaagctgag
    68581 ctaaaatcgc aatttcatca gatgagctgc accctctatc gctttttaat cttatatatg
    68641 tttttatctt tctgacgccg ctactgtttt ttgcgatatc tactaattct aatttttgct
    68701 caacattatc tacttcgcct ataagcagaa cttctcccca aaatgactct acatctatat
    68761 cgaaattgct aagatttttt gtgcttgcta ttttggcttg aatttttgtt ttgatgactt
    68821 tatctcttat aatggagtaa attcccctct cgtcttgcga aacgctataa acattataat
    68881 cgtgttggcg ttcatacctg tgcctattgt tgttagacat ccgctaaaca ttaaagctaa
    68941 gaaaattagg aatatatatt tcatgataat tagtttagta ttataatttt tatttcattc
    69001 tatctaaaat gagcttaaaa aattacatat cggatatatt caactcaaat ttataaaaat
    69061 tttgctaaaa tcttaactta gcttatcttg ttggagagta aaacgacctg gtggcgttct
    69121 gtgacttcaa atcatgtggc ggggcggttg accgtttcgc ggggtgttcg attcactcac
    69181 tctctcgcca aattttacaa attatttgta ggtaaggttt tttatgttcg tggacaaggg
    69241 cgacgtatcg ctttcttctg ggcttttgaa aagagcctac ctaatattta tcttatgcgt
    69301 aggatctata gtctgctttt tatcttttat aatattcgtt gaactctata aattagaaga
    69361 cggattaaaa agatcaaatt cttatcatat gatgagagtt atgagtaagc ttgagactat
    69421 acactctgag ttagcatatc ttttagaaga taatatcagc gatgaagagt tttatgaaac
    69481 tatcgcagat aatgatatct tagatggtat atttttaacg gataacaact ttaccattat
    69541 aaaatcatat tcgaaatttc aaaacgatct tagctcatta aaactattta attataaaga
    69601 tcattttaac aaatatggat tttttatatc taaatttata tatttagagc ctgatcatcc
    69661 gaatatattt attattttgc cttatgttaa tggagtaaat ttagttggta tgcttgacgc
    69721 ttcaaagctt gcctcatttg ctcttttaga tgatgcaaac aagtattcgt atatgatgga
    69781 ttctgagggt tttatagttt tagattccat aggtagcaat atatacgata cgtttaacat
    69841 agattatgat tggaaaaata gccaaaagat gcatctttcg gttgattatt ctacaaaaca
    69901 acttagtttt tattcagtag agtttaacaa aggtttaaat ttagccatca tatcaaaaga
    69961 gccgtttttc gatatattta actcgtattt agtagtaatc gcagtagcta tcatactgtt
    70021 ggtatttgct tgtttggttt tgatagataa tataatattt ttaaagcgaa atgttatatc
    70081 tcctattagc aagctaaaaa gtcttttgtc tggattagaa ataggcgaaa tcgatgttaa
    70141 taaatttaaa tcaaataaag attttgacga catttgctat gaaatattaa atttatacac
    70201 aagtcaagtt atagcaaaaa atgatcttag agattataaa gaacagtatg ctttgatatt
    70261 tcaaaaaagc tctataaaaa tactatttgt agatgcaaaa aatgggcaga ttatagaagc
    70321 gagcgagtct gctatagagt tttacggtta tgataaagat atgcttctta ctatgaatgt
    70381 atttgattta caagcaacta gtttgtatga ttattcttat agcaaattag cagatatgaa
    70441 tgacgatgaa aatatctact gttctcacag actagcaaac ggcgatctaa aaatagttca
    70501 gataaaaatc actccggtaa gctcttat
//
LOCUS       DAPPKW010000003        44890 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.003, whole genome shotgun sequence.
ACCESSION   DAPPKW010000003 DAPPKW010000000
VERSION     DAPPKW010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 44890)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 44890)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..44890
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.003"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            67..1614
                     /locus_tag="RPW04_000145"
     CDS             67..1614
                     /locus_tag="RPW04_000145"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012235.1,HMM:NF012869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDX6294281.1"
                     /translation="MLKLKNKNLILSAITLLSVFYSALNLAVLAFINRYLLNITSGEY
                     GLILYFIILLLLFFIASLAFRYTISLASQNYIYDMRLSIIKRILDTDYHHTRQIGRAK
                     LIALLSSDIASITNGFVRIPEILQGGLVAIVSFFYILYLSPILAFSVFIWLGFGAILC
                     LYFIKKLYNLFKQHRKNEDRLYKNYETSIDAHKEFSLNLKRAADFFNLKFRLNVQDMR
                     KNMLSIDFYQSLVSNWVSMMTLGAVGLVIYLSLGFELLDMAGAVTISIIILFLRAPLM
                     MVLFAYPSIIKSKVAAQKIKSLELAAYKEEFDTYKSFDNWQRIELRNISFSYENKLIL
                     DNINMRLDRGECLFLIGENGSGKSTLFLILAGLLKPSSGEIYIDDVKIDSSNIQIYKN
                     TISAVFSEFYLFSDIENDAKKWFELLEFRAPNDSQIDPQNLSQGQKKRLALINALLEN
                     RNILLLDEWAADQDPHFRAKFYTEILKLFKQQKITVFAISHDDRYFKYADRIYELIDR
                     KLINYLS"
     gene            1712..2458
                     /locus_tag="RPW04_000146"
     CDS             1712..2458
                     /locus_tag="RPW04_000146"
                     /EC_number="1.14.14.18"
                     /inference="COORDINATES: protein motif:HMM:TIGR04109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HugZ family heme oxygenase"
                     /protein_id="HDX6294282.1"
                     /translation="MDAKRKAIEHMNSDHMDTLIMLCKHFGAVQNPTNVRLDSIDEDG
                     MDIACDQLLVRVAFLKKAEQNGEGFKTAIIDLMSSLDIKEGIAAVSKDMIDFIDSFNS
                     VLISSLNGDHCVCSYAPVVRDNNDFYILISEVSEHFKSIKENSDKISIMFLEDESKAK
                     TVFARKRASFRSKAIFLDDKKESLFSKFESKFKSESAIKMIKNMSDFHIIKIEINKGR
                     FVKGFGAAYDTDGFEIIQRAHGANPHNNKR"
     gene            2458..2652
                     /locus_tag="RPW04_000147"
     CDS             2458..2652
                     /locus_tag="RPW04_000147"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294283.1"
                     /translation="MKNVKPKETGKLFMSYFSLLITVLWVILEKPVCLMRAKNSNLKF
                     DAKFDKFTKYIIFQKQKYKL"
     gene            2740..4734
                     /locus_tag="RPW04_000148"
     CDS             2740..4734
                     /locus_tag="RPW04_000148"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012801.1,HMM:NF019335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDX6294284.1"
                     /translation="MLKKITICSLSAATLVFGTQIRLDTTVISTSGFETKLKDEVRNV
                     IVITSEDIQNKGYKNVEEILEAEPSISFIDPGFGRTIDMRGQGINSNFSTKIMLNGVA
                     LNMLDTSHATVPINTISVDDIEQIEIIPGGGSVLYGNGTSGGVINIITKNQPRDFYTN
                     LSTKFGSYNYKDLNFAVGGMANDDLFLKFNAKKFDEKGYRDGEKNRGYYTSGGATYQI
                     NDNQSVMLNSSYYNATTSTLNALSKAQVNSDPKQGGKKTTKDGTRLDLTLDYALKYGD
                     YVDFHIFPYYQKIKQELDDNSGFEDKKYGINLKNRMDYGNGELIYGYEYYINKGLRYR
                     NNQGSRRGVTVKNSINVDLEKKSHSIYVMDNHHFNDWFSISSGYRFEKASYDLDRSSI
                     TNIYMPNSTRPMTTVKNIANQPDTNNHAFEITPNLKYSDTGNIYFKFERGFYSASPTQ
                     LTNSVRPQGATRGLVYKFNNLKSEIFYTYEIGAKDYFLGSYMSATAFITDKKNEIRNI
                     MEEDHTLWRFINLDKTRRLGIELYASQYMLDNDLSLKQTYSYVDAKITSGEFNNKRIP
                     LAAKHKLVFGADYKVIRNLNVFGDIKYFSDMLDNGYEKINSKTIVDIGAKYSFPKGFL
                     VIAGIKNLFDKRYFTYQDKIKDQYKPANARNYYVEFKYVY"
     gene            4724..5704
                     /locus_tag="RPW04_000149"
     CDS             4724..5704
                     /locus_tag="RPW04_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018137058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDX6294285.1"
                     /translation="MSIKSYLIISFLICLLVLTIISLALGGASVGFNEIFNLYSQDLS
                     DTQKTILIDIRLPRIVMAILIGALLASSGVVVQTIFLNPLADPYIIGIASSATFGAVV
                     AYIFGLEDIYYGIFAFIASCILSIVIFKLSKNGRSVATLLIIGIAFSSMLGAFTSLAT
                     YLIGEDSFKIIAWMMGYLGGASWFKVGLLTLPLILSLIYFYKKRNELNLLLSGDEEAK
                     SLGADVDITKKRLLIVASLSVAFSVAFTGMIGFVGLIIPHILRMILGTSNNAVLIPIS
                     TLAGALFLLFCDLVAKNVLNPTEIPIGVVTAFFGAPFFLFLAIKYSKGVI"
     gene            5704..6480
                     /locus_tag="RPW04_000150"
     CDS             5704..6480
                     /locus_tag="RPW04_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6294286.1"
                     /translation="MSIEISNLSFKFNKNQILNKLNIQINSAEFIGILGPNGCGKSTL
                     LKNILKILQPNSGIIKINFKPLKEYSQKDLAKIIGFVPQKSDLALPLSVEDLILMGRY
                     VSIKGIFGNYGSDDYRKVSEVMELLNLKEFKDRSANSLSGGEFQRVLLARAIVSDPKI
                     LLLDEPTSALDLNYAVEIMSLCKKITKKLNIFSIVVLHDLNLASIFCDKIIMLKDGKV
                     AYSGTPKELYKKDILKEIYNLECDVLNHNGFSIIIPKNKG"
     gene            6483..7277
                     /locus_tag="RPW04_000151"
     CDS             6483..7277
                     /locus_tag="RPW04_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002944475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDX6294287.1"
                     /translation="MKKILIILVALFEFAFGVKLVVLDPAAVEILYMLKAEDNIAAIA
                     ISSMTKIYPEDKTAQLPNVGSYMKPNLERIVEINPDLVITSFHSINVDNDLKNLGLKT
                     LSLNANSLNDIYKNIEKIADITQKQEEGKQLIDEIKSKLSHQDKLSGKKVVVLFSALN
                     LMAFNSGTLPIDITNNLGLKNIAENLQGATSVIQTEYILEQNPDFIIVVETANNSKSL
                     LQLYPVLSKTKAAKDGKIISVPSALILRGTPRIAQSIEKIYEILAK"
     gene            7549..8058
                     /locus_tag="RPW04_000152"
     CDS             7549..8058
                     /locus_tag="RPW04_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002944488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HDX6294288.1"
                     /translation="MKNIVIYSSVTGNTKKIAKAVSESLSCIYISFKDANFVNLDEFE
                     FIALGFWVDKGYPDRDMKAFMQSIKNKNIGLFMTLGADPKGEHAKKCMQNVKYMMQIN
                     GCNIKKEFISQGAISPNLINKITKAGKSTPHREARWKEASTHPDNNDLLNAKIAFSKN
                     KQLPKMNSI"
     gene            complement(8062..8928)
                     /locus_tag="RPW04_000153"
     CDS             complement(8062..8928)
                     /locus_tag="RPW04_000153"
                     /EC_number="1.11.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002819059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDX6294289.1"
                     /translation="MFYQLNYSAEHPKAKINHTKGFCASGVFEPSKEISKFVNVPLFK
                     KDKIDAQIRYSLGGAIMDDKSKPRGMAIKMQGDGDLWTMVMLNLPIVFAKNAKEFGDF
                     FKMRIPVDGKVDSDFIKESMQKVNSYRNFDNYINSIGITSSVANTPFFSAHTFWFKSA
                     KDDKMIAAKWRFEPVSGVKYLNKDEEKTLSNDYLSQRFKEHVKSSPVEYKMYLTLANE
                     NDPVDDPATLWKGKHKEVLAGTLKVYKYDGEGCNSDVYFPSEIPSGVGAPKDKLFDIR
                     NEVYAITFGRRQ"
     gene            complement(9220..9296)
                     /locus_tag="RPW04_000154"
     tRNA            complement(9220..9296)
                     /locus_tag="RPW04_000154"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9260..9262),aa:Met,seq:cat)
     gene            9421..10179
                     /locus_tag="RPW04_000155"
     CDS             9421..10179
                     /locus_tag="RPW04_000155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294290.1"
                     /translation="MLNLLKKMAFALAFLVIFVAGVTFDAKFLMQNQFSDKELTFSRN
                     VDESIKVEPSVFISEPRFVSSALLRNKSSLTTLEKDSIKNTFNAIINRAKEDGICTGG
                     SYSIEPSYSYENGKEVIVGQNANAKLSCKITKENLNLYNKFLADVDTILETNEFISSV
                     TPAIRESSDPEVAAKNAEILYDKIIQKALSFEKHYSEITNKLCTTKDINFDMPPTLLR
                     ANYKTMSMQGDGIALPITDEQNQKLSANVIYMCK"
     gene            complement(10242..12929)
                     /gene="flgE"
                     /locus_tag="RPW04_000156"
                     /pseudo
     CDS             complement(10242..12929)
                     /gene="flgE"
                     /locus_tag="RPW04_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732339.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
     gene            complement(13084..13755)
                     /locus_tag="RPW04_000157"
     CDS             complement(13084..13755)
                     /locus_tag="RPW04_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HDX6294291.1"
                     /translation="MAVKLAAGFSPNYYMLSINEQKVEFAKTISKLTKNANTQTLQKR
                     AFALNYLKQIYQKSFRDIDVSNLKRLVSIQKEYKISNLFDESEYKLKLDSVPVSLAIA
                     QATIESGWGKSRFAKEANNLFGHWTWGGKGLVPLNRDEDKMHKIKIFNSLDDSVNAYA
                     LNLNSHPAYAQFRDMRAIYREKGLIYDGLEAAKTMENYSQMGKTYVKQLEKTIKLYDL
                     TKFDF"
     gene            complement(13772..14515)
                     /locus_tag="RPW04_000158"
     CDS             complement(13772..14515)
                     /locus_tag="RPW04_000158"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004317368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HDX6294292.1"
                     /translation="MQLSKYNASGNDFVIFHTFKSLNRRELAMSLCDRFNSIGADGLI
                     VILPSKECDFEWEFYNSDGSLASMCGNGSRAAALYAYQNSLCSKNCSFKTGAGIIKAS
                     IDNDFVEVALTAPKKLSEPFIEYGFEWSFYDTGVPHLVTFVDNLSKFDLSVCSELRKK
                     YNANVNFAHLKDNGVLEVRTFERGVENETNACGTGMAASFYTGVDRFKFNPCLKVNPK
                     SKEDLWLKFDGETIYFKGKVKHCFDTSIS"
     gene            complement(14496..15107)
                     /locus_tag="RPW04_000159"
     CDS             complement(14496..15107)
                     /locus_tag="RPW04_000159"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDX6294293.1"
                     /translation="MNSKFHNAYVITGNIGSGKSTVVNMLKLYGFSVIDADKISHDVL
                     DKSSDKIAKEFGKEFVSGSNVDRKKLGALVFKDREKLKLLESILHPQIRSIIYEKAHF
                     LEDKGLPYFIDIPLYFEKNAYNFDKVVLIYAPEHILLHRVISRDRLSKEDAKLRLSTQ
                     IDIEEKVAKSQFVIKNDGNLKNLNLELNNFIEKLKENYATLKI"
     gene            complement(15097..15492)
                     /locus_tag="RPW04_000160"
     CDS             complement(15097..15492)
                     /locus_tag="RPW04_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDX6294294.1"
                     /translation="MKTSEVLGNTDVSLRYPKAIGPYSAYREVGDMIFCSGQIPVNPN
                     NGLIASSIEDQTTQALKNVGGILEELGLSYKNVVKATVFLTDINDFSAMNEVYAKYFS
                     EPYPARSAVGVKDLPKGVKIEIEVIAHKL"
     gene            15636..16619
                     /locus_tag="RPW04_000161"
     CDS             15636..16619
                     /locus_tag="RPW04_000161"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDX6294295.1"
                     /translation="MISYKEAGVDIDAGNSFVEGIKPFVKSTLTPNVIGGIGSFSGAF
                     RLPSGYQKPTLLAATDGVGTKLRLAIDSNRLETIGQDLVAMCVNDLICNFATPMFFLD
                     YYASAKLDVDSAKKVVKGISDGCIIAKCALIGGETAEMPSMYDGKDFDLAGFAVGIAE
                     EDEIDRTKFVKNGDILVALPSSGLHSNGYSLARAVVSKMGLNLNDKFEDKTLIETLLE
                     PTRIYVDDFLNLKDKISALAHITGGGIVENLPRVFPSGLGAKIERSSIKTPEIFKLLA
                     KNVSVSEMDRTFNCGVGMILVVPKNNVTNVLANCNGYVIGEVTQGDSVRLI"
     gene            complement(16651..17736)
                     /locus_tag="RPW04_000162"
     CDS             complement(16651..17736)
                     /locus_tag="RPW04_000162"
                     /inference="COORDINATES: protein motif:HMM:NF013862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HDX6294296.1"
                     /translation="MKRSELKIGLALSGGGIRAAIYHLGVLKYLAENNLLEQVTHISS
                     VSGASMCVGLLYAKNNMRFPTSSEYLTTILPTLKEQILNVNLEQKAIIEAIFKFKFNK
                     KANAIALALAKHWGINGGFGDISKKPLWSVVCTSYETGKHFRFSQDIVGDWAFGYIKD
                     SNFPLADAIAASAAFPFLIGTYEIDTKPFEWCDKSGTKIEPKSDKLHLWDGGVYDNFG
                     LEPIYQMENNGMYSDDVNFCILSNAGKSISFQSKKTVTRIVDVTTDQISILRARAFRD
                     FIFRNKNGYYLKMGRDFSEVVRRAKQDMSLADKYKNDFLSEEDCQKVANYPTTLKNPT
                     EQDFDLILRQGYESIIYNKLVFDFIEP"
     gene            complement(17723..18916)
                     /locus_tag="RPW04_000163"
     CDS             complement(17723..18916)
                     /locus_tag="RPW04_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HDX6294297.1"
                     /translation="MDLSNDFRPNNINDMVGQKDIVELFSKFIKSKKIPHSLFFGATG
                     CGKTTMAKIIAKQMNYEFFELDGANLKSEDIRKIISKFETTLYKPLIFIDEFHRLSKT
                     QQETLLIPMEKGKCIVMGATTENPKFVVSSGIRSRMMIFEFKPLSHDELTILLTKVQN
                     VIKFEITNEAKDYLINSSGGDARSLLNLLEFALSADKSIGLNILKTLRSHRVSEGVSN
                     SDTHYELTSALIKSLRGSDIDASIYYLARLIQGGEEPAFLARRMVIFASEDIGNANPN
                     ALNLATNVMLAVSKIGYPEARIILAQCAVYLASSPKSNSSYKAINDAIEFVENRPALP
                     VPKYLINTDKAKSEYLYPHDFGGWVEQKYMSTQVKFYKSNAIGFEKTLDEWITKLKES
                     YNEKI"
     gene            complement(18918..19808)
                     /locus_tag="RPW04_000164"
     CDS             complement(18918..19808)
                     /locus_tag="RPW04_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002947229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDX6294298.1"
                     /translation="MKNNSYIFGVFITLIGGVLWGFSGACGQYLFEQKGVGSDWLVPY
                     RLLISGIILLSVYLIKSPKIIFLPFKNPKNIPQILVYAIIGLMMTQYSYFYSIELSNA
                     AVATVIQYTAPVFILIVVCFMDKRLPYFKELVALGFAIFGVFFLATHGDFTTLVISQK
                     ALVFCFISALCVVVYNIVPKRLNKDFPISLVLGWGLIIGGTILSLYMKVWTLDGVNDL
                     GGYLAVGGVILFGTVLAFSFYMTGVGIIGASRASLIAAIEPVAAAFFTSVWLGVRFVF
                     FDYLGFILIMLCVFILSKKG"
     gene            complement(19864..20382)
                     /gene="tpx"
                     /locus_tag="RPW04_000165"
     CDS             complement(19864..20382)
                     /gene="tpx"
                     /locus_tag="RPW04_000165"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HDX6294299.1"
                     /translation="MSNVTFQGNPVTLSGNSVNVGQVAPEVELVGKDLSTFKVGGATG
                     KYQVLVVVPSLDTGVCAAEARKFNEKMASKSGVSISIISMDLPFAMGRFCTTEGIENL
                     RVGSDFRGAKFGNAYGVLVKDSPLEGLLTRAVFVLDKDGVVKYKEIVSEITTEPNYEA
                     VLHAISDGCGCH"
     gene            complement(20460..20873)
                     /locus_tag="RPW04_000166"
     CDS             complement(20460..20873)
                     /locus_tag="RPW04_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDX6294300.1"
                     /translation="MSQKPKAVPSALISRVKAFIIDMFLIAVPLLYITTYLILDGKND
                     FQHNQLAIFGVWLVFGVIQSLFFALNAQSPGYRSQNIYLVSLDGKKAGFISYMLRYIL
                     FITTFIFGGSLFCFFRKDKRNIQDLLTSTIVVTKR"
     gene            complement(20873..21481)
                     /gene="pyrE"
                     /locus_tag="RPW04_000167"
     CDS             complement(20873..21481)
                     /gene="pyrE"
                     /locus_tag="RPW04_000167"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDX6294301.1"
                     /translation="MNLEDIYRDAGAYLKGHFLLSSANHSEYYLQSAKVLENPILAGK
                     LADELFEVIKNAGVEFDSVCSPALGGILAGYELARAGAKRFIFTERVEKVMSLRRGFS
                     VAKGEKFIICEDIITTGGSALESAKIIEELGGVVVGFAALANRGFCKVHNMRNEGKSS
                     CKLPADKPLFALGNFEFEIYTPEECPLCKTGSKAIKPGSRGN"
     gene            complement(21484..22041)
                     /gene="frr"
                     /locus_tag="RPW04_000168"
     CDS             complement(21484..22041)
                     /gene="frr"
                     /locus_tag="RPW04_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDX6294302.1"
                     /translation="MLDEIYKNQKAFSDKALEVLKRDFTTLRTGKVNINIVDHINVDY
                     YGSPTALNQVATVLATDASTISISPWEKTMLKAISSAIQAANIGVNPNNDGDSVKLFF
                     PPMTTEDRQKNAKEARSMGEKAKVAIRNIRKDANDDIKKIEKDKSVSEDEIKKGYDEV
                     QKITDSYISKIDQLVKDKEAELLKV"
     gene            complement(22031..22948)
                     /locus_tag="RPW04_000169"
     CDS             complement(22031..22948)
                     /locus_tag="RPW04_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HDX6294303.1"
                     /translation="MFADAHILIYHRFGDDRYPSTNISLQNLREQFKYFNENGYEIVP
                     LKKLIQKVKNSEYIPDNWLVLTIDDGYKSFYKNGFPIFKEFGYPFTLFVYVEASQKKY
                     GDYMSFDDIKDVQNWGAEIGYHSYSHKYMTYLNESEIKDDFEKGIQIFEHNLGYKPQY
                     FSYPYGEYNQTITNMAKEYGLEASFNQNSGAVSASSSIGDLDRIPSMDGTNLKAMLSS
                     RYLKADFIQPLTYPSNSILDNVIAKIDSNSTSAQLYISGLGSMRVDVSDGIIDVNISK
                     KLTKRRVRVIINDGHKTTTQMIIKDKNVR"
     gene            complement(22987..23316)
                     /gene="secG"
                     /locus_tag="RPW04_000170"
     CDS             complement(22987..23316)
                     /gene="secG"
                     /locus_tag="RPW04_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDX6294304.1"
                     /translation="MSSIFLALQFILAVILTIAILLQKSSSIGLGAYSGSNESLFGAK
                     GPAGFLAKFTFFIGLLFVLNTLALGYTYNQSLRNSVVETKEFKNMIIPETGATPAAPA
                     APVAPAN"
     gene            complement(23416..24096)
                     /locus_tag="RPW04_000171"
     CDS             complement(23416..24096)
                     /locus_tag="RPW04_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HDX6294305.1"
                     /translation="MSLYDRNYAKEQANYEEAGLQSARATFVKQTYQLLTASLVAATA
                     GAYIGVDYIKTFSWMLLIVEFALLFGLMFSKKNPSLALVMLFGFTFVSGLTLGPVLNT
                     YIGAGMGNIITQAFLMTAVAFGGLTVFAFNTKKDFSAMGKMLFITLIVIVVASLLNLF
                     FQSALLATVVAAIGAILFSAYILYDTQMIIRGGYDSPVLAAVALYLDILNLFISLLQL
                     LGIFNKNE"
     gene            complement(24379..24466)
                     /locus_tag="RPW04_000172"
     tRNA            complement(24379..24466)
                     /locus_tag="RPW04_000172"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(24430..24432),aa:Ser,seq:tga)
     gene            complement(24475..24630)
                     /locus_tag="RPW04_000173"
     CDS             complement(24475..24630)
                     /locus_tag="RPW04_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004321784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294306.1"
                     /translation="MRYFVMTLIITAFLGCSSTWHGIKEDSNSAYQWSKKKVNQSADW
                     VEEKTSD"
     gene            complement(24651..24724)
                     /locus_tag="RPW04_000174"
     tRNA            complement(24651..24724)
                     /locus_tag="RPW04_000174"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(24690..24692),aa:Cys,seq:gca)
     gene            complement(24748..24834)
                     /locus_tag="RPW04_000175"
     tRNA            complement(24748..24834)
                     /locus_tag="RPW04_000175"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(24799..24801),aa:Leu,seq:taa)
     gene            complement(24845..24919)
                     /locus_tag="RPW04_000176"
     tRNA            complement(24845..24919)
                     /locus_tag="RPW04_000176"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(24885..24887),aa:Gly,seq:gcc)
     gene            25062..25137
                     /locus_tag="RPW04_000177"
     tRNA            25062..25137
                     /locus_tag="RPW04_000177"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:25095..25097,aa:Ala,seq:ggc)
     gene            25340..28540
                     /locus_tag="RPW04_000178"
     CDS             25340..28540
                     /locus_tag="RPW04_000178"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012311.1,HMM:NF015737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDX6294307.1"
                     /translation="MKKSDKMVIIALCTFLNSYIFALEPNFEKDLDIINTKSAYEQGI
                     TGQDVFIGIFDDDFRLEHSSLNDQILEALTFSDQTKANYWNYNSHGSQVAAIALGAFN
                     NPIMHGVAYNAKGYGMQAPASLDAFNHIKENLDAEYKFFGDPNKNIKIINNSFGDFVF
                     PILHIDATEDFYELTQDEVEDYIIEAMDQTNANSSIIRLSKEKKILNIFADGNSGISS
                     PSTLASLPHYDQDLNAWLAVGAIDSSKVTKLGDEGFDMSKPFAFTDFSNAFKGTAYFS
                     ILTPGEYIWSADSATTNGFVPEQGTSMAAPFATGAAALVSQKFPFLNGKQIGDLLLST
                     ANSNIKLPKMVLKNITNNKSKKLFVSLIYVDNAIPTMADGSLDWTQINKDRIEAGYTD
                     EEIAKFYTQYFKKYSIKTTDKQIQKYIAEQIDFISDINNIQVSSITKEELIGQGILDI
                     KKAMNGLALLDANRLTLNDILNYGNEQALYYTIDTNGYNATFANDIAQRKYNPLWHYK
                     GGEYSMHDLNVGFIKDGGGILTLSADAFFEGNTIVRNGGLKLFRIGNKGGEIKNSNVF
                     VEQAGTLSGNGIIQKNLYNQGIVRPGNEDLSDLIVNGTYTQNGENASLQIDVANLAKN
                     NSKLIANNYDIKNSKLVFIPLTDTFYEKNTKIKLDLGNLKNHLNSFSTIGLEKSLTLD
                     FDISQDKESIVFKGVKNGAYDIKNSGIGASLRDIRYKLNDPNLNRQNLYKDFFKNLDT
                     SKDISSIQNTVKSIDNQSYLSNISALIEDQAKITQNYTIFAINNNLSNTLFAPNNDYA
                     KNKEYFWYAAPNYKKTDADEYKGRKIGTDFGFGTSMSDNGQISLNLGASNTKNKFNES
                     NYETDSINAGINYIYDFQNFKVLSAAALGYGKNTLDLSSNPILSSSSKSNYNHFIAGA
                     MMGLAKDFEFNNIILTPISYVNYNYIYQEGFDINSNIFARKVDSISHHTTSINAGLNL
                     AYLNKNQNITTKLSSYAIYEYRLSGKDIKNSSKFIDFSSNGFTQKYELSEHLLTIGAN
                     LEMLYPNDVFIRFSTAANIQQDAKSLNLTATIGKMF"
     gene            complement(28919..29167)
                     /locus_tag="RPW04_000179"
     CDS             complement(28919..29167)
                     /locus_tag="RPW04_000179"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294308.1"
                     /translation="MSDSSNKNYNKFFGSTNPFSKTDSEFIENHLNFAFGDIFLYLKI
                     DDKTIIMFWLGCLIASGGLREYKRVVNVALKTAYRQMR"
     gene            complement(29281..29445)
                     /locus_tag="RPW04_000180"
     CDS             complement(29281..29445)
                     /locus_tag="RPW04_000180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294309.1"
                     /translation="MLCPPDIKHFHGTGFDTKAAHIAFTRERDGKNVIWMEHVRDEKY
                     ERLIKQAKED"
     gene            29778..30359
                     /locus_tag="RPW04_000181"
     CDS             29778..30359
                     /locus_tag="RPW04_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000065430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDX6294310.1"
                     /translation="MKKVLLINGAKDFAHSKGMLNQTLHNEAKNTLQNLGITVQETII
                     DKGYDVQNELKKWTSNEAIVWQMPGWWMGEPWIVKKYIDEIFTAGHGVLYENDGRSRS
                     NASAKYGSGGLVKDKKYMFSLTWNAPIEAFTNTDQFFGGVGVDGVYLHLHKAHEFIGM
                     GGLPTFICNDVMKNPQVEIYLQNYRKHLEKVFG"
     gene            complement(30415..30687)
                     /locus_tag="RPW04_000182"
     CDS             complement(30415..30687)
                     /locus_tag="RPW04_000182"
                     /inference="COORDINATES: protein motif:HMM:NF024094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294311.1"
                     /translation="MNKILVAYFSVSGQTKLLAKTIAEVSCSDIYEITPEQIYTSADL
                     DWHDSNSRSSVEILKKSCNANFKNAKALSSTTNSTSVKKWLESLGI"
     gene            complement(30743..31075)
                     /locus_tag="RPW04_000183"
     CDS             complement(30743..31075)
                     /locus_tag="RPW04_000183"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294312.1"
                     /translation="MNNRRDFIKFMLLIIDMPNKIFASSGSKTLVVYYLHTLNTHILA
                     SYIQHIVGADMLKLETFDTYLINYDQMVSLAAKKQSLKKKPKEICSLIQSKSHLTCLF
                     QIYKIYQI"
     gene            31124..31312
                     /locus_tag="RPW04_000184"
     CDS             31124..31312
                     /locus_tag="RPW04_000184"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294313.1"
                     /translation="MQYGVELFDTLNPLIELRLNILAFTFCAFLPSLIACGSINFKAC
                     FATRNGLSNLVLITSIFA"
     gene            complement(31348..31548)
                     /locus_tag="RPW04_000185"
     CDS             complement(31348..31548)
                     /locus_tag="RPW04_000185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294314.1"
                     /translation="MLAFYPVLGFLVLVMSIRLVGEYALVKPGREMLFVPLNSESKYK
                     VKNFLDSVKNMKKRIINLKIRS"
     gene            complement(31965..32273)
                     /locus_tag="RPW04_000186"
     CDS             complement(31965..32273)
                     /locus_tag="RPW04_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009649957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HDX6294315.1"
                     /translation="MWESTNRALEETALAGLGAGNVILTENGEKYTVIALSDKKEVKI
                     RHPKGRDVRFMMSGSGQNDSDLLFRLTSNLACLSEDELENMEAKDCAMVLKEVSSFLA
                     "
     gene            complement(32818..33438)
                     /locus_tag="RPW04_000187"
     CDS             complement(32818..33438)
                     /locus_tag="RPW04_000187"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HDX6294316.1"
                     /translation="MEVKLLNFTPLWVCSNAIRTCWQSFDKGDNGGEKDVELIDRVGN
                     KFKHASTLEHLYYNFYIKGVSRALLQELARHRIASLSVKSTRYTLKELKNESEFKVGD
                     FESASVYIVLTGNEFVDNASINALENLRRILNQNTSLDIAKYCLPESYKTELSWSINA
                     RSLQNFLSLRSSKAALWEIRDLANLIYQNLPDEHKFIYENCLIKPE"
     gene            complement(33473..35122)
                     /locus_tag="RPW04_000188"
     CDS             complement(33473..35122)
                     /locus_tag="RPW04_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HDX6294317.1"
                     /translation="MIYDVCIIGSGAGASPVAYELSRAGFSIVVLEKGKFYKEEDFSK
                     DELAISRRKMFAPNLKDEYHIVIEKEPNGEVSRYNGTWSFWNGSLVGGSSNLMSGFFH
                     RLKPNDFKLKSVYGEIEGANVADWPISYDELEPYYAKVEKVVGVSGKVVKHKFSEPRS
                     TAEFPYEKLEENAAAKWFDKAAIELGLTPLPTPRAILSKNDLGRNACYYSHFCGAYPC
                     ASGAKGSGRVFLQQCPAKVIPEAFVYKLVSDKFSVKEALYYDKFKKSHSIKAKIFVVA
                     AGAVETSRLLLNSKNRHFANGLANNSGNVGKNLIFSAGGVGSGTFYLKDLSQKDAADL
                     MSRGLFFNRHIQEWYEFKKDGKRYKGGIIDFLFEHPNVIPNVTAQFYENGNLIFGDKL
                     MKKIKNNVYASRKLTFEVFNDWLPTNTTFVSVSDTHRDKYGIPVGVISLDAHKQDLEV
                     GEFLSKKAVEILKQMGAKDVSYSVSGSPPPNLVAGGARFGDDPKTSVLDKNCKTHEIN
                     NLYVSDASFMPTGGSVPYTWTIYANSFRVSDIIKKRLSNLV"
     gene            complement(35150..35671)
                     /locus_tag="RPW04_000189"
     CDS             complement(35150..35671)
                     /locus_tag="RPW04_000189"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294318.1"
                     /translation="MKDRRSFVKVAYGAMAFSAAPINLFAQDENILADKTLSKDEIYN
                     ILNSVSKHLFPIITQLNIDVLSYLKIIISHSKVSIGAKNFIVNGVIWLNDVSIKQYES
                     DYLSLSDKKQNDLLEIVSKDEEWGESWIYDMLVFCSEAVFSDPIYGVNTDENGWKWIS
                     HETGLPQPKTPFL"
     gene            complement(35661..36095)
                     /locus_tag="RPW04_000190"
     CDS             complement(35661..36095)
                     /locus_tag="RPW04_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDX6294319.1"
                     /translation="MKNFCNIFNTFGLKFQHLSLLIIRLVLAYGFYETAVPKWQNIEP
                     TAQWFASMGFPLPFLSVYLVAIFEALAVPLFALGLFTRIISVPLIVIVLVAIFAVHFG
                     NGYSLANNGFEVPLYYLVMLFAIFSFGAGKISLDAVMNRYER"
     gene            complement(36165..36335)
                     /locus_tag="RPW04_000191"
     CDS             complement(36165..36335)
                     /locus_tag="RPW04_000191"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294320.1"
                     /translation="MKKLTSIFVGLFLLIGLSTSLSAAEKCGTSKCGDTKVEKPKETN
                     KTEKCGASKCGG"
     gene            complement(36447..37034)
                     /locus_tag="RPW04_000192"
     CDS             complement(36447..37034)
                     /locus_tag="RPW04_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HDX6294321.1"
                     /translation="MQNRFSCRQFKNEKIENAKIKEILNFARLTPSSCGLEPWKFVVI
                     SKSDELDELGKICNNQDQVKACSHAVIILARNDLKSSCEFLQNQVKRKQTIPEKYNKA
                     MKYFANRFDHQTNDELTHYASLQCYLLCANLINIAYSMDIKSCIIGGFDKISLTNFIN
                     LTNNFTPVLVVALGMSDETAPAKMRLNLDDILIWR"
     gene            complement(37069..37584)
                     /locus_tag="RPW04_000193"
     CDS             complement(37069..37584)
                     /locus_tag="RPW04_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDX6294322.1"
                     /translation="MRRSDRELDRQIALKIIDESEYATLSCVDEYGEVFSIPISVARD
                     GMSVFIHGAKTGSKARLYKDGKSVTLVAVSQNRVPTPSHEFCQSIKDSASELGGRVFT
                     TEYCSAIATTKAYEITQEEEKIEALRLLCEKYTPKYMEYFNTAVQGLLKKISIYELKI
                     MSLSAKAKIIK"
     gene            complement(37594..38513)
                     /locus_tag="RPW04_000194"
                     /pseudo
     CDS             complement(37594..38513)
                     /locus_tag="RPW04_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646257.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HrgA protein"
     gene            complement(38538..40301)
                     /locus_tag="RPW04_000195"
     CDS             complement(38538..40301)
                     /locus_tag="RPW04_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AIPR family protein"
                     /protein_id="HDX6294323.1"
                     /translation="MSHILLGEIKQSKIILNNQKLADDRAFSHVLLKYFFDVEYVDQE
                     DFITDGANDGGIDFAYFDEEELKVVVCQSKFTDNLSYADIIAELDKMYSTIHNFTVGN
                     TGIYNDRVKRTIQNFIDRLPDEGSTNIEYHLFTSSDLDKQAITNKIEIAKHGFSIDMV
                     SLYTIADIERKIEESQQTLETVMEAKILIDKKGNYLEYESNTSCGVMVNVSSKSIVNL
                     YNKYSKKGLFDLNIRKYIPNKLVDDGIRKTLSSDKERENFWFLNNGIVIACEDFDVDG
                     NSIKLNKFSIVNGGQTTNRIAEYKGNNSQEFYVPCKIVAEKKKDPNLSFYTKIAEATN
                     SQKPILPRDLKSNTPEMVQLSRKFAEEGIFFEIKRGVKQPSKLKVSIKNDEFGQMILS
                     FVLQKPGTARSGKKAIFEQNDTYNRLFKQNYMADKNKKTFVVDCIALYNKYLAIEKDL
                     KTSGDLSSNQAEILKNGKQIMLALFGVLYRLVNNDVTEKELIEDSTILLNRDFKYGAF
                     ISNYQNDDLDKKFRRIIINLVKMVTDSYKIAYDRKIATSVSNYFKTNDKYLENILNTF
                     SDLLSMSIGEDLKAQIDIFKR"
     gene            complement(40328..41092)
                     /locus_tag="RPW04_000196"
     CDS             complement(40328..41092)
                     /locus_tag="RPW04_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HDX6294324.1"
                     /translation="MRINKFISHNTNYSRREADELVKNGKVSINNKVIDNLATDVKED
                     DKIKINGRFIRLKKEFSIIVYNKQKGELVTKKDDRGRKTIYDNLPRGISKFISIGRLD
                     FASEGLLLLTDAPAIAEALMGSDIEREYYLKIKGEITPNVIAAMQEGFFAKDATKGAH
                     ARTKQISMEFKPFLAYKIISFSGGYTRLKVIINEGQNRELRRFFGYFDLEVMDLKRVS
                     FGRVSLDQLGEGKWRYFTNSEYDDLRDFLKQNGVRY"
     gene            complement(41092..42045)
                     /locus_tag="RPW04_000197"
     CDS             complement(41092..42045)
                     /locus_tag="RPW04_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HDX6294325.1"
                     /translation="MDILSIAKEVLSLEADELKRQVELLDFKFEKAVNLALSCKGKLI
                     ISGVGKSGLVGAKIAATLASTGTPSFFLHPTEALHGDLGMISQNDAVLAISFSGESSE
                     LLLILPHIKKRGIKIIGMAKSGSSLEMLSDAFISLDIVREACPLGAAPTVSTTLTLAL
                     GDALAVCLMQLKEFKKEDFAMLHPGGSLGKRLYLKVKDVMRKDELPIVSDDVSLKFAI
                     NSMTHGKLGTVLLTNKNGLLVAVLSDGDLRRALGNENFNINDQAIKFATKNPKVLEDE
                     NMLAYDALKLIEEYKIQILIITKDKKPIGALHIHDLTSLGL"
     gene            complement(42069..44030)
                     /locus_tag="RPW04_000198"
     CDS             complement(42069..44030)
                     /locus_tag="RPW04_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012660772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HDX6294326.1"
                     /translation="MNEENKTPVAERTNRKHRYKHHRDNLKKQANANTQNVQANEVAT
                     DIAESEVKKPKKRKHKNGNNTVKISGNEGWQKDMQASIEANRASHELRLNPLKYLNSS
                     EHKIKITPLGGLGEIGGNMTVFETDNDAIIVDIGMSFPSESMHGVDILIPDFDYIRKI
                     KQKVRGIIITHAHEDHIGAVPYFFKEFQFPIYATPLPLGMISNKFEEHGLKAHRSYFR
                     PIEKRKLYEIGDFEIELIHITHSIIDASALVITTKAGTILHTGDFKIDHTPIDGYPTD
                     LNRLAYYGERGVLCMLSDSTNSYKEGITKSESSVGKTFDAIFATSKGRVIMSTFSSNI
                     HRVYQAIERGVKHGRKVCVIGRSMERNLWTAIELGYVNLDKKIFIDANEVSKYPDNEV
                     LIVTTGSQGETMSALYRMATDEHKYIKIKPTDQIIISSKAIPGNETSVSTVLNYLLKS
                     GASVAHQDFSEIHVSGHAAQEEQKLMLRLVKPKFFLPVHGEYNHIVRHKETAIACGVD
                     ERNTYLMSDGDQIEVCQKYIKRLKTVKTGKVFIDNQINKQISDDVVIDRQKLAEAGVV
                     TIISQIDKNAKTLIQNRVISYGLVSERQSKNLSKEMEEVLLQFLSNVKDELLHDQRAL
                     ENQIRQVIRKHIFRKIKKYPTIVPVVYLM"
     gene            complement(43999..44805)
                     /gene="rsmA"
                     /locus_tag="RPW04_000199"
     CDS             complement(43999..44805)
                     /gene="rsmA"
                     /locus_tag="RPW04_000199"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDX6294327.1"
                     /translation="MIKVKKKFGQNFLQDENIKNQIIQAIPNDVKRIVEIGPGLGDLT
                     QKLVKLDSMIDCFEIDSELYTILLDKFRSELDSGKLNIINSDALNAWDKLSASEYFLV
                     ANLPYYVATNMILKAIDDKNCKGLVVMIQREVAIKFSSEAGDKEFSSLAILTWLKGKC
                     ELLFDVPSSAFNPPPKVISSVIRIIKDRDLSLNLKYDNFKNFLRVAFSAPRKTLLKNL
                     SNLVQRDRLEIFFNTENLSHTIRPHELSVALYLKLFKEAENERRKQNPCG"
BASE COUNT        14764 a         8173 c         6905 g        15048 t
ORIGIN      
        1 agaaaagtcg ctcatattta tacctcataa tctaaaattt gattacgatt ttaaaatact
       61 tttaatgtgt taaagcttaa aaataaaaat ctaattctaa gcgctataac tttactatcg
      121 gtattttata gcgctctaaa tttagccgtt cttgcgttta taaatagata tttgttaaat
      181 ataacaagcg gcgaatacgg tttaatctta tattttatca ttttactttt actatttttt
      241 atagcatctt tggcttttag atataccata tctttagcta gtcaaaacta tatttatgat
      301 atgcgattaa gcataataaa gcgtatttta gatactgatt accaccatac aaggcaaatc
      361 ggcagagcta aactcatagc tctgctttca agcgatatag caagcataac aaatggattt
      421 gtacgcatac ctgagatttt gcaaggaggt cttgttgcga ttgtatcgtt tttttatatt
      481 ttatatctat cccctatttt agcttttagt gtttttatat ggctgggatt tggggctatc
      541 ttatgtttgt attttatcaa aaaactatat aatcttttta agcagcatag aaaaaatgag
      601 gatagactct acaaaaatta tgaaacatct atagacgctc ataaagaatt tagtctaaat
      661 ttaaaaagag cggcggattt ttttaatctc aaatttagat taaatgtaca agatatgaga
      721 aaaaatatgc taagcataga tttttaccaa tcgctagtaa gtaactgggt aagtatgatg
      781 acgctaggag ctgttgggtt ggttatttat ctcagtcttg gatttgaact gcttgatatg
      841 gccggagccg taactatatc tatcattata ctatttttaa gagctccgct tatgatggtg
      901 ctttttgcct atccatcgat aataaaatca aaagttgccg ctcaaaagat aaaatcttta
      961 gagttagccg cgtataaaga ggaatttgat acatataaga gttttgataa ctggcaaaga
     1021 atcgaactta gaaatattag ttttagttat gaaaacaagc ttatattgga taatataaat
     1081 atgagattag atagaggcga atgtctgttt ttaataggag aaaacggcag cggaaaatca
     1141 actttatttc ttattttagc gggacttttg aagcccagta gcggtgaaat ttatatcgat
     1201 gacgtaaaaa tagacagctc aaacattcaa atttataaaa atactataag cgcggtattt
     1261 agtgaatttt atctatttag cgatatagaa aatgatgcta aaaaatggtt tgaactactt
     1321 gagtttagag ctccaaacga ctctcaaata gatcctcaaa atctctctca aggtcaaaaa
     1381 aagagattag ctctgataaa tgcgctatta gaaaatagaa atattttgct acttgatgag
     1441 tgggcagcag atcaagatcc acactttaga gcaaagtttt atactgaaat tttaaagcta
     1501 tttaaacagc aaaaaattac cgtttttgct ataagtcatg atgatagata tttcaaatac
     1561 gcagatagaa tatacgaact aatagataga aaacttataa attatttatc ataacttata
     1621 atttttaaat ttaatattta taaagtttta agaaaattta tgttaaattt tggtatttaa
     1681 tatcaatatt aattttaaaa aaggagaata aatggatgcg aaacgaaaag caatagagca
     1741 tatgaacagc gaccatatgg atacgcttat aatgctttgc aaacactttg gggcggtaca
     1801 aaatcctaca aatgtaaggc ttgattctat agacgaagac ggtatggata tagcgtgtga
     1861 tcaactttta gtacgagttg cgtttctaaa aaaagccgaa caaaacggcg aaggatttaa
     1921 aacagcgata atagatctta tgagtagtct tgatataaaa gaaggtattg ctgcggtttc
     1981 aaaagatatg atagatttca tagatagctt taacagcgtt cttatctcga gcctaaacgg
     2041 cgatcactgc gtctgttcgt atgctccagt agtgagagat aataatgatt tttatatact
     2101 tatatctgaa gttagcgaac atttcaaatc cataaaagaa aatagcgaca aaatatcaat
     2161 tatgttttta gaagatgaga gcaaagctaa aactgttttt gctagaaaaa gagcaagttt
     2221 tagatctaaa gcgatatttt tagatgataa aaaagagagt ctgttttcta aatttgaaag
     2281 taaatttaaa agcgaatcgg ctataaaaat gataaaaaat atgtctgatt ttcacataat
     2341 taagatagaa attaacaaag gaagatttgt aaaaggtttt ggagctgcgt atgatacgga
     2401 tggttttgaa attatccaaa gagcgcatgg tgcaaatcct cacaacaata agaggtaatg
     2461 aaaaatgtca aaccaaaaga gaccggcaag ctatttatgt cttatttttc tttgttaatc
     2521 actgttttat gggtgatatt agaaaagccg gtctgtttga tgagggcaaa aaactctaat
     2581 ctcaaatttg atgctaaatt tgataaattt accaaataca taatcttcca aaaacaaaag
     2641 tataaattat aacgataaag cctatcttaa ttacatattg agcaagtaaa tattaataac
     2701 ataaaactga atatcaaact aaattaaagg agttcatcta tgttaaaaaa aataactatt
     2761 tgcagcttaa gtgcggctac gcttgtattt ggtacacaaa ttaggctaga taccacagtt
     2821 atatcaacta gcggatttga aaccaaacta aaagatgaag taagaaacgt gattgtcata
     2881 actagtgaag atatccaaaa taaaggctat aaaaacgtag aagagatctt agaagcagaa
     2941 ccttcgataa gctttataga tcccggtttt ggcagaacta tagatatgag aggtcaaggc
     3001 ataaactcaa atttctcaac aaaaattatg ttaaatggag tcgctctaaa tatgctagac
     3061 acatctcacg caacagtgcc tataaatact atatcagtcg atgatataga gcaaatagag
     3121 ataataccag gaggcggaag cgtactttat ggaaatggca ctagcggagg agttataaat
     3181 ataattacaa aaaatcagcc tagagatttt tatacaaatt tatctaccaa attcggatca
     3241 tacaactata aagatctaaa tttcgcagtc ggaggaatgg cgaacgatga tctgttttta
     3301 aaattcaatg caaaaaagtt tgatgagaaa ggctacagag acggcgagaa aaatagaggt
     3361 tactacacaa gcggcggagc aacgtatcaa atcaacgaca accaaagcgt aatgctcaac
     3421 tcgagctatt ataacgcaac aactagcact ttaaacgctc ttagtaaagc tcaagtaaat
     3481 agtgatccaa aacaaggcgg taaaaaaacg accaaagatg gaacaagact tgatctcacg
     3541 cttgattatg ctttaaaata cggagattac gtagattttc atatcttccc atattatcaa
     3601 aaaattaaac aagagctaga tgataatagc ggatttgaag ataaaaaata tggaataaat
     3661 ttaaaaaacc gtatggatta cggcaacggc gagctaattt atggctatga atactatata
     3721 aacaaaggat taagatatag aaataatcaa ggctccagaa gaggcgtaac cgtaaaaaac
     3781 agtataaacg tagatttaga aaaaaaatct cactcgattt atgttatgga taatcaccat
     3841 tttaacgact ggtttagtat aagtagcgga tatagatttg aaaaagctag ttatgatttg
     3901 gatagaagtt ctatcacgaa tatttatatg ccaaactcga cacgcccgat gacaacggta
     3961 aaaaatattg caaatcagcc agatacaaat aatcacgcat ttgaaataac tccaaattta
     4021 aaatactctg ataccggaaa tatatatttt aaatttgaaa gaggatttta ctctgcatct
     4081 ccgactcaac taacaaatag cgtacgtcct caaggcgcta ctcgcggttt agtttataaa
     4141 tttaacaatt taaaatcaga gatattttat acatacgaga tcggcgctaa agactatttt
     4201 ctaggctcgt acatgagcgc tacggcattt atcacggata aaaaaaatga gataagaaac
     4261 ataatggaag aagaccatac tctatggcgt tttataaatt tagataaaac aagaaggctt
     4321 gggatagaac tttacgcaag tcaatatatg ttagataatg atcttagctt aaaacaaaca
     4381 tattcatacg tagatgcaaa aatcacaagc ggtgagttta ataataaaag aatacctcta
     4441 gcggcaaaac ataaattagt tttcggagca gactacaaag tgattagaaa tctaaatgtt
     4501 tttggcgata taaaatactt ttctgatatg ctcgataacg gatatgagaa aataaactcg
     4561 aaaaccatag tagatatagg ggcaaaatac agttttccaa aaggcttttt agtcattgcc
     4621 gggataaaaa atttatttga caagagatac tttacatatc aagacaaaat caaagaccag
     4681 tataaaccgg caaacgcaag aaattattat gtagagttta aatatgtcta ttaaaagcta
     4741 tctcattata agctttttaa tctgccttct tgttttaacg atcatttcgc tagctttggg
     4801 aggagctagc gtaggattta atgagatttt taatctatac tcgcaagatc taagcgatac
     4861 gcaaaaaact atactgattg acataagact tcctcgcata gtgatggcta tattaatagg
     4921 agctcttttg gccagctccg gtgttgtcgt tcaaactata tttttaaatc ctctagcaga
     4981 tccatatata ataggaattg catcaagcgc aacatttggg gcggttgtag cttatatatt
     5041 tggattagag gatatatatt acggtatttt tgcttttata gcttcgtgca ttctttctat
     5101 agttatattt aaactatcaa aaaacggtcg ctctgtagct actttgctta taataggcat
     5161 agcattttca tctatgcttg gagcttttac atcacttgct acttatctta taggagaaga
     5221 tagttttaag ataatagcgt ggatgatggg atatcttgga ggcgcaagct ggtttaaagt
     5281 aggcttgcta actctacctt tgatactttc gctaatatat ttttataaaa agagaaatga
     5341 gttaaattta cttttaagcg gagacgaaga agcaaaaagc ttaggagccg atgtagatat
     5401 aacaaaaaaa agactgctca tagtagcatc tttaagcgtg gcattctcag ttgcatttac
     5461 tgggatgata ggttttgtcg gacttatcat acctcatatt ttaagaatga tactaggcac
     5521 gtcaaacaat gctgttttga tacctatatc tactttagca ggtgcacttt ttttactatt
     5581 ttgcgatctt gtagctaaaa atgtgctcaa tccgacagaa attccgatag gagtcgtaac
     5641 agcatttttt ggagctccgt tttttctatt tttggctatt aaatatagca aaggagtcat
     5701 ctagtgagta tcgagatatc aaatttaagt tttaaattta ataaaaatca gatactaaat
     5761 aagctaaata ttcagataaa tagcgcagag tttataggaa ttttaggtcc aaacggctgc
     5821 ggaaaatcaa ctcttcttaa aaatatatta aaaattctgc agccaaatag cggcattata
     5881 aagataaact tcaaaccgct aaaagagtat tcgcaaaaag atttagccaa aattataggt
     5941 tttgtaccgc aaaaatctga tttagcactt cctcttagcg tagaggattt gatacttatg
     6001 ggaagatatg tgagtataaa agggatattt ggcaactacg gctcagatga ctatagaaaa
     6061 gtgagtgaag taatggagct tttgaattta aaagagttta aagatagatc cgcaaactct
     6121 cttagcggag gcgaatttca aagagtttta ctagccagag cgatagtctc ggatcctaaa
     6181 atactacttc ttgatgagcc tacaagcgct cttgatctta actatgcagt cgagatcatg
     6241 agtctttgca aaaagataac taaaaaatta aatatattta gcatagtagt tctacatgat
     6301 ctaaacttgg caagtatatt ttgtgataaa attataatgc taaaagatgg aaaagtcgct
     6361 tacagcggta ctccaaaaga actatacaaa aaagatattt taaaagaaat ttacaatctt
     6421 gaatgcgacg tgctaaatca taacggtttt tcgataataa taccaaaaaa taaaggataa
     6481 aaatgaaaaa aatattaatc atacttgtag ctctgtttga atttgcattt ggagtaaaat
     6541 tagtagtgct ggatcctgct gcggtagaaa tactatatat gctcaaagcc gaagataata
     6601 tagccgctat agccatttca tctatgacta aaatttatcc agaagataaa accgcacaac
     6661 ttccaaatgt cggctcttat atgaaaccga atttagaacg catagtggag ataaacccgg
     6721 atcttgtgat aacaagtttc cactctataa atgtagataa cgatctaaaa aatctaggct
     6781 taaaaacatt aagtttaaat gcaaacagtt tgaacgacat ttataaaaat atagaaaaaa
     6841 tagcagatat aactcaaaaa caagaagaag gcaaacagct tatagatgag ataaaatcga
     6901 agttatcaca tcaagataaa ttaagtggta aaaaggttgt agttctattt tctgcactaa
     6961 atttgatggc ttttaatagc ggaactctgc ccatagatat cacaaataac ttaggtctaa
     7021 aaaacatagc cgaaaatctg caaggggcta cttcggtgat tcaaactgag tatattttag
     7081 agcaaaatcc cgactttatc atagttgtag aaacagcaaa caactccaaa agtctcttgc
     7141 aactctatcc tgttttaagt aaaactaaag ctgccaaaga tggcaagata atctcagtgc
     7201 cctcagccct tatattaaga ggaactccaa gaatagctca aagtatagaa aaaatttatg
     7261 aaattctagc aaaataaata tagctgatat ttcttctata aaaagtagac aatactccgg
     7321 acttaaaaaa tagaaaaaga agtgaattta aatccacttc ttttaaattt aaacagcatt
     7381 taaagctagt taaacaacca aaaaaactat ataaattgtt aagataacat acaaaaacaa
     7441 attataagca ttaataataa tatgataaaa tgccgtctca taaaacgata tattttgaga
     7501 aataatatat aaacgaatat atcaaaaaat agtagaaaac gagacagcat gaaaaacata
     7561 gttatatact caagcgtcac aggtaacaca aaaaagatag caaaagcagt atctgaatct
     7621 cttagttgta tctatatcag cttcaaagac gcaaattttg taaatttaga tgaatttgaa
     7681 tttatagctc ttggattttg ggtagataaa ggatatccag atagagatat gaaagctttt
     7741 atgcaaagca taaaaaataa aaatatcggt ctttttatga ctcttggagc agatccgaaa
     7801 ggcgaacacg ctaaaaaatg tatgcaaaat gtaaaatata tgatgcaaat aaatggttgc
     7861 aatattaaaa aagagttcat atctcaaggc gctataagcc cgaatttaat aaataaaatt
     7921 acaaaagcag gcaaatcaac gccgcataga gaagctagat ggaaggaagc tagcactcat
     7981 ccagataaca atgacctttt aaacgccaaa atagcattta gcaaaaacaa gcagcttcct
     8041 aaaatgaact ctatttaact cttattgtct tctaccaaaa gttatagcat aaacttcatt
     8101 tcttatatca aataacttat cttttggtgc gccaactcca gaaggtattt ctgaaggaaa
     8161 atacacatca gagttgcaac cctcgccatc gtatttatat acttttaaag ttccggccaa
     8221 cacctctttg tgttttcctt tccaaagagt agcaggatca tctacaggat cattttcatt
     8281 tgccaaagtc aagtacattt tatactcaac cggtgagctt tttacatgct ctttaaatct
     8341 ttgtgataaa tagtcgttac taagagtttt ttcctcatct ttatttaaat acttcacacc
     8401 actaacaggt tcaaatctcc atttagcagc tatcatttta tcatctttag cactcttaaa
     8461 ccaaaatgta tgagcactga aaaatggcgt atttgcaacg ctagaagtga ttccgatgct
     8521 atttatatag ttatcaaagt ttctataaga atttactttt tgcatagact ctttgataaa
     8581 atcagaatca acttttccat ctacaggaat acgcatttta aaaaaatctc cgaattcttt
     8641 agcgttttta gcaaaaacta taggtaaatt tagcataacc atagtccata aatcgccatc
     8701 accttgcatt tttatagcca taccgcgagg tttgctttta tcatccatga tagctccgcc
     8761 taaagagtat cttatctgag catctatctt atctttttta aaaagaggaa cattaacaaa
     8821 ttttgaaatc tcttttgaag gctcaaaaac accacttgcg caaaaacctt ttgtatgatt
     8881 tatcttagct tttggatgct ctgcagagta atttagttga taaaatatat cagctagatc
     8941 ctcggcacta tatgagctcg gtaattttta ctcagcattt agcgcagaca cgaaaagaca
     9001 tgctgcagca cagaaactaa aaactttatt cattatttct ccttaaaatt ttaataagga
     9061 attagtataa ttaaatttag taaataataa attaattact aaattatagt aaattaaaaa
     9121 ttaaatttat ataaacttat tataataaaa ttgtaaatca ataaaaaact taaatgacgg
     9181 attataaatt taaaaatata taaaaaatat agtagaatat ggtgcctagg gggagactcg
     9241 aactcccgac ctccggctta tgagaccagc gctctagcca gctgagctac cgaggcgcac
     9301 caaaagtaag aagcgcatta tatcctatga aagcttatat ctaaattaat cttttttaag
     9361 ataaatttgg atttttaagg tacaataacg tttaaaaatt tatacaaaaa aggaacaatt
     9421 atgttaaatt tacttaaaaa gatggcattt gctctcgcgt ttttagttat attcgtagca
     9481 ggagttacat ttgatgcaaa gtttttgatg caaaatcaat tcagcgacaa agagctcaca
     9541 ttctctagaa atgttgatga aagtatcaaa gtagaacctt cggtatttat ttctgaacca
     9601 agattcgtgt cttctgctct actaagaaac aaaagctcac tcactacctt agaaaaagat
     9661 tctatcaaaa acacgttcaa cgctatcata aatcgtgcaa aagaagacgg tatatgcacg
     9721 ggaggtagct atagtataga acctagctat tcatatgaaa acggtaaaga agttatagta
     9781 ggacaaaatg ccaatgcaaa actcagttgc aaaatcacaa aagaaaacct caacttatac
     9841 aacaaatttc tagccgatgt agatacgata cttgaaacaa acgaattcat atcatctgta
     9901 actccggcta taagagaaag tagcgatcca gaagtagcag ccaaaaacgc agagatactg
     9961 tatgataaaa tcattcaaaa agcactatct ttcgagaagc attattcaga aattacaaat
    10021 aaattatgca caaccaaaga tataaatttt gatatgccac ctactctttt aagagcaaat
    10081 tataaaacta tgagtatgca aggagatggc atagcgctgc ctataacaga tgaacaaaat
    10141 caaaaactaa gcgcaaatgt aatttatatg tgcaaataaa taattatttt tgttctttta
    10201 gcaaataaaa gctaaaagaa caaagcatta aaaaagttaa attactgttt taattgaagt
    10261 aaagtattaa gcatctgatc gccggtggtt atcgtttttg agttagcttg atatccacgt
    10321 tgtacgacta taagctgagt taaagaacga gatagatcaa cgttactcat ctcaaggcta
    10381 gaagcattta tctttccacg gcctgctgtt tgagccgaac cgataacagg agctccagag
    10441 tttgcagtct gaacaaatac gttaccgcca tcgctctcta aaccttcgtt attcgtaaat
    10501 ttagcaagtg ccacttgagc tagtccaaag cttctaccat ttgtaaatgc tccgatgata
    10561 gttccgctct catctactct tagctcattt agcgtaccgg ctgtgtaacc gtcttgaaca
    10621 atgttatctg tagtactggt attatcattg cttcttaatc cgttgtagtc tccgattttt
    10681 ccaaaattta tctctatatt ttgtcctgga gcactaccgt tatttgcagt gaaagtaaga
    10741 tttgatggac tatagcctag taagcttcca tcggatttaa atctaacggt acctgctatg
    10801 acatttgcga cttcacctgt ttcggtattt attttacctg gttctggtac ttggataagc
    10861 atagaccact cagtaccgtt ttcagggcta taactgatct ttctaaattc catttttatc
    10921 tcgtgttttg aacccaaact atcgtaaatt tcggttgtag cagcgtgact tgacataact
    10981 atatttgacg aagttttctc accagttccg gtacttaaac cgccgcccaa gctcgaaaat
    11041 acatccgtga atttagtatt ttcatttata ttcgtgtttg gatcacttag tccagtgata
    11101 gctaaatgca tattgtagtc gttggtaaat gtatcgttat ttacagggac atttacggta
    11161 ccatcaggat ttgtagtagc tagaggatta tctccttccg gagttacagc accgccagct
    11221 ccaactgtta aatgactatc gttttcccca tatgcagcgt cgccttgtgg attttttacc
    11281 acaaactgac ctttttcatt tacggttatc tctacaccgt cgtttctatt tctatcttta
    11341 aggcttgcat ttgagtattt accgtctgga tctgctgctg gtaactgaat accggctgcc
    11401 gcatcagtat ctatagcccc ggaccaatct aaagccgaat attcagctaa tttatcattt
    11461 gatatggcgg catttatagc agcagtaact tctgctggag tagctgtagt tggagtagca
    11521 tttatagcgg ctattatagc ggcagtagcg gctatcgctc cttgacttat aggaactata
    11581 gcatctactc tagttttttc agctgttgca gcatttagca tagcagtcct atctgctcct
    11641 acagccgccg tagcaacaag ttgagcattt gtagctgctt gacttacatt ttctccttga
    11701 tagtttacat actcccttgc atctgtttgc atagcttttc ttaaatcttc agtagtatgc
    11761 acctttctag cagagctatc gttgtatgag tggttacctc cggtagctgt agcggtataa
    11821 gtatatttat aagccgtaat aacatttgta gatgtcatag atgtagtatc tccgctaagc
    11881 ttagttatct tgatattttt catagtatcg gtgctaccga gattattttg atttactagt
    11941 tggatttggt tgccgtttat aaggctagca gtgacgcctg tcttatcagt aatcgtattt
    12001 atcttattta ccacatcttc tatattggta acgctagtag aaggtatctc tataccgttt
    12061 atcgctatat tgagtctatg tcctcctact ggagcgggag ctaaaccacc gaatgtagct
    12121 ttagcatcgg cgtagcttac ccacatacct tggccgtctc ttaagttaaa agcttcgcct
    12181 gttgcgttaa agagaactcc tagatcaact cccgtttctt taaccttgac ttgtttatct
    12241 ttatctacat agtattcgtt tttgctcaaa tcattttcgt ttttagtttc accatcttcc
    12301 catataccgt taccattttt atctaaccaa ccgtttttag aatcaagtga ataaataggt
    12361 gagcttttag ttcctatcga acttcctgag tttaaatttc ctattaaagc tacttcggta
    12421 gtagcgcgcg ccggagtgct aagacccggt tctatctgga tatttttaac aggaccggta
    12481 ggatctatag tgcccgtatc ttcatttcgg agccagcctt gaacgatata accattttta
    12541 tcgacaaaat ttcctaaact atcacggcta aaatctccgt ttctagtata tttatacgtt
    12601 tttccaccgt ctggagaaac gacaaaaaat ccatcacctt gtatggctaa atctgtattt
    12661 ttatctgttg tttgaactga accttgcttg aatatctttg ttactgagtt tatctgagta
    12721 cctaaaccta tttgcattga gtttttaccg cctaagtcgc cttgtggagc ggttgctact
    12781 tttgctgttt gactaaataa atctgcaaag ctcgcacgtg aatatttaaa gcctactgta
    12841 ttaacgttgg ctatattatc accttagacg tccatggcta tctggtgagc ttgaagtcca
    12901 gtaactccag cccataatgc tctcatcata tcttatcctt tatgttggct gcatttgctg
    12961 cggattaaaa tttgatgtta tataagcaat ttttgttccg aatttgattt tttaaatttt
    13021 taaattttta tcaacgataa tttgaaaaag taaaataccg ctacgatcaa acccgggcta
    13081 aatttaaaaa tcaaatttag taagatcgta taatttaatg gttttttcca gctgttttac
    13141 atatgtttta cccatttgtg aataattttc catagttttt gcagcctcta aaccatcgta
    13201 tattagccct ttttctcggt aaatagctct catatctcga aactgagcgt aagcaggatg
    13261 agagttcaaa tttaaagcgt aagcatttac cgaatcatca agagagttaa atatcttgat
    13321 tttatgcatt ttgtcctcat ctctatttag aggaactagt cctttgccgc cccacgtcca
    13381 gtgaccaaaa aggttatttg cttcttttgc aaaacgactc tttccccaac cgctctctat
    13441 agtagcttga gctatagcta aagaaactgg cacggagtct aattttaact tatattcgct
    13501 ctcatcaaat aaatttgaga ttttatactc tttttggata gatacgagcc gttttaaatt
    13561 tgagacatct atatctctaa aagatttttg gtaaatttgt tttagataat tcaatgcaaa
    13621 cgcgcgtttt tgcaaagtct gggtatttgc atttttagta agcttagaaa tagttttggc
    13681 aaactctact ttttgttcat ttatactaag catataatag ttaggagaaa agcctgcagc
    13741 taacttaaca gccataaata taagtataat tttaactaat actcgtatca aagcagtgtt
    13801 tgaccttgcc tttaaaatat atagtttcgc catcaaattt aagccataaa tcctctttgc
    13861 tttttggatt tacttttaaa cagggattaa atttaaaacg atcgactcca gtataaaatg
    13921 aagccgccat accggtaccg caagcatttg tttcgttttc aactccacgc tcaaacgtgc
    13981 gcacctctaa aactccgttg tcttttagat gagcgaaatt tacatttgcg ttgtattttt
    14041 ttctaagttc ggaacaaacg ctgagatcaa atttagaaag attatctaca aaagttacta
    14101 aatgaggaac tcccgtatca taaaaactcc actcaaaacc gtactctata aatggctcac
    14161 tcagcttttt tggcgccgtt aaagccactt ctacaaaatc attgtctatg ctcgctttta
    14221 tgatccctgc acctgtttta aatgagcagt ttttggaaca tagtgagttt tgataagcat
    14281 aaagcgcggc tgctcttgaa ccatttccgc acattgatgc taaactccca tcgctattgt
    14341 aaaactccca ttcaaaatca cactctttgc tgggcaaaat aactataagt ccatctgctc
    14401 ctatagagtt aaatctatca cataaactca tagccaactc tcttctattc aagcttttaa
    14461 acgtatgaaa tataacaaag tcatttccgc tggcattata ttttgagagt tgcataattt
    14521 tcctttaatt tttctataaa attatttagt tctaaattta gattttttaa gttaccgtca
    14581 tttttaatga caaattggga cttagccact ttttcttcta tatctatctg cgtactcaaa
    14641 cgaagcttag catcttcttt gctgagtcta tctctgctaa taactctatg caataaaata
    14701 tgctccggag cataaatcaa aacaacttta tcaaaattat atgcgttttt ttcaaaatat
    14761 agcggaatat cgataaagta cggaagacct ttatcttcca aaaaatgtgc tttttcatat
    14821 ataatagatc ttatttgcgg atgtaaaata ctctcaagaa gtttcaattt ttctctatct
    14881 ttaaaaacta gagctcctaa cttttttcta tcgacattgc ttccgctaac aaactctttt
    14941 ccaaattctt ttgctatctt atcagaactc ttatctagca cgtcgtgaga tattttatct
    15001 gcatcaatca cgctaaaacc gtacaatttt agcatattta cgactgtact tttgccagat
    15061 ccgatgtttc cggtgataac atatgcgttg tggaatttag agtttatggg ctattacctc
    15121 tatttctatt tttacgcctt ttggcagatc tttaacgcca accgcacttc tagccggata
    15181 tggctcacta aaatacttag catacacttc attcatagct gaaaaatcat ttatatcagt
    15241 taaaaatacg gtggctttaa caacattttt gtaactaagt ccaagctctt ctaatatacc
    15301 tccgacattt tttaaggctt gagtagtttg atcttctata ctgctagcta ttaaaccgtt
    15361 gttgggattt accggaattt gacctgagca aaatatcata tcaccaactt ctcgataagc
    15421 gctgtatggt ccgatagctt ttgggtatct caaggaaaca tcggtattac cgagtacttc
    15481 gcttgttttc atcttatatc tccttaaaaa attatagatt acattctatc ataaatttat
    15541 aaatttaaaa agactaccta aaaagcataa gaagctcttt taatagaatg taagctgaat
    15601 ttagctaaaa tcctgccaaa aataaaggtt aaacaatgat aagttataaa gaagccggtg
    15661 tagatataga cgcgggaaat agctttgtag aaggtataaa accttttgtg aaatcaactc
    15721 ttacgccaaa tgtaatagga ggtataggat cattttcagg agcatttcgt ctaccaagcg
    15781 gatatcaaaa accgactctt ttagcagcta cggatggagt aggaactaag cttcgccttg
    15841 ctatagactc aaatagatta gaaactattg ggcaagatct agtagctatg tgcgtaaatg
    15901 accttatttg taactttgct acgcctatgt ttttcctaga ctactacgct agcgcaaagc
    15961 ttgatgttga tagtgccaaa aaagtcgtaa aaggtataag cgatggatgt atcattgcaa
    16021 aatgcgctct tataggagga gaaaccgctg aaatgcctag tatgtatgat ggaaaagact
    16081 ttgatctagc agggtttgcg gtgggaattg ccgaagaaga tgagatagat agaactaaat
    16141 ttgtaaaaaa cggtgatatt ttagtagctc tgcctagctc tggtttgcat tcaaacggat
    16201 attcattagc tcgtgcagtt gtatcgaaaa tgggattaaa tttaaatgat aaatttgaag
    16261 ataaaactct tatagaaaca cttttagagc cgactcgtat ctatgtagat gattttttaa
    16321 atttaaaaga taaaatatct gctctagcac atataacagg cggcggaata gtcgaaaacc
    16381 tacctagagt atttccatct ggtcttggcg caaaaataga aagaagctca ataaaaactc
    16441 ctgagatatt taaacttcta gctaaaaacg tatctgttag cgagatggat agaacattta
    16501 attgcggagt cggaatgatc ttagtagtac caaaaaataa tgttactaac gtgttagcaa
    16561 actgtaacgg atatgttata ggtgaagtaa cacaaggaga ttcggtccgc ttaatataag
    16621 caaaatagct caatttaagc ggattaaact ttatggctct ataaaatcaa aaacaagttt
    16681 attgtatatg atgctctcat atccttgcct taatataaga tcaaaatcct gttcagtagg
    16741 atttttaagc gtagttggat aatttgccac tttttggcag tcctcttcgc tcaaaaaatc
    16801 atttttatac ttatctgcca aactcatatc ttgttttgct cgtctaacaa cttcactaaa
    16861 atcccgaccc atttttagat aataaccgtt tttatttcta aaaatgaaat cacgaaatgc
    16921 tctagctctt aagatcgata tttgatctgt cgttacatca actatacgcg tgactgtctt
    16981 ttttgactga aatgatatag atttacccgc attactaagt atgcaaaaat taacatcatc
    17041 tgagtacatt ccgttatttt ccatttgata aatcggctca agaccaaaat tatcataaac
    17101 gccaccatcc cacaaatgca atttatcgct tttaggctcg attttagttc ctgatttatc
    17161 gcaccattca aaaggcttag tatctatctc gtaagttcct atcaaaaatg gaaacgctgc
    17221 actagcggct atcgcgtcag ctaatggaaa attagaatct ttaatatatc caaaagccca
    17281 gtctccaaca atatcttgtg aaaaacgaaa gtgtttacct gtttcgtaac tcgtgcaaac
    17341 aacactccat aaaggttttt tagatatatc gccaaatcct ccattaattc cccaatgttt
    17401 agcaagagcc aaagcaatag cgttagcttt tttattaaat ttaaacttaa aaatagcttc
    17461 tataatagcc ttttgctcta aatttacgtt taaaatttgc tctttaagag tcggcaaaat
    17521 agtagttaaa tactcactac tagtaggaaa acgcatattg tttttagcat acaaaagccc
    17581 tacgcacata ctagctccag atactgacga tatatgcgta acttgctcta aaaggttatt
    17641 ttcggctaga tattttagaa ctccaagatg ataaatcgca gctctaatgc ctcctccaga
    17701 caatgctaaa ccgattttca attcagatct tttcattata actctctttt aattttgtta
    17761 tccattcatc taaggttttt tcaaaaccta ttgcattact tttataaaat ttaacttgtg
    17821 tgctcatata tttttgctct acccagcctc caaaatcatg cggatataga tattcgcttt
    17881 ttgccttatc tgtatttatg agatactttg gcaccggcaa cgcaggtctg ttttctacaa
    17941 attctatagc atcatttata gctttataac ttgagtttga ttttggtgaa cttgccaaat
    18001 acacggcgca ttgagccaat ataattctag cttcaggata gcctatttta ctaacagcta
    18061 acataacgtt agtagctaaa tttagtgcgt taggatttgc atttcctatg tcttcactag
    18121 caaatatcac catacgtcta gctaaaaatg ccggctcttc accgccttgt ataagccttg
    18181 ctagataata aatactagca tctatatcgc taccgcgtag actttttata agtgcgcttg
    18241 tcaactcata atgcgtatca ctgttactta cgccttcact tactctatga gaacgaagag
    18301 tttttaatat atttaaacca atacttttat ccgcgctcaa tgcaaactca agtaaattta
    18361 aaaggcttct agcatctccc ccgctactgt taataagata atcttttgct tcatttgtta
    18421 tttcaaattt aataacattt tgaacttttg ttagtaaaat cgttagctca tcatggctaa
    18481 gaggtttgaa ctcaaatatc atcattcttg atcttatccc actactaaca acaaatttag
    18541 gattttctgt agtagcgccc ataacgatac attttccttt ttccatagga atcaaaagag
    18601 tctcttgctg agttttacta agcctgtgaa actcatctat aaaaatcaac ggtttatata
    18661 gagtagtttc gaatttagat ataatttttc ttatatcttc actctttaaa tttgcgccgt
    18721 cgagttcaaa aaactcataa ttcatctgct ttgctataat ttttgccata gtcgtcttac
    18781 cacaaccagt agcaccaaaa aatagactat gaggtatctt tttagatttt ataaatttag
    18841 aaaatagctc tacaatatct ttttgtccga ccatatcatt gatattattt ggtctaaaat
    18901 cattacttaa atccatctta gccttttttt gataatataa aaacgcaaag cattatcagt
    18961 ataaacccta aataatcaaa aaatacaaac ctaactccca gccaaacaga agtaaaaaat
    19021 gcggcggcaa caggttcaat ggcggctata agacttgctc tactagctcc tattatacct
    19081 actccggtca tataaaaact aaaagctaaa accgtcccaa atagtataac tccgccaaca
    19141 gccaagtatc cgccaagatc gttaacccca tctaaagtcc aaactttcat atataaactc
    19201 aagatagttc caccgatgat aagaccccag ccaagcacca aagatatagg aaaatcttta
    19261 ttaagacgtt ttggaactat gttataaaca accacgcaaa gtgcgcttat aaaacaaaat
    19321 acaagagctt tttgacttat aacaagagtg gtaaaatccc catgagtagc caagaaaaat
    19381 actccaaata tagcaaatcc aagcgctact agctctttaa aatacggtag tcgcttatcc
    19441 ataaagcata ctactatcaa aatgaatacc ggagccgtgt attgtataac agttgcaact
    19501 gcagcatttg aaagctcaat agagtaaaaa taactgtatt gagtcatcat aagacctata
    19561 atcgcataaa ctaaaatttg cggtatattt tttggattct taaatggaag aaaaattatt
    19621 ttcggacttt ttataagata aactgatagt aaaattatac cagatataag cagtcgatat
    19681 ggaacaagcc agtctgagcc tactcctttt tgttcaaaaa gatactgacc acaagcaccg
    19741 ctaaaacccc ataaaactcc gccgataagc gtgatgaaaa cgccaaaaat gtagctatta
    19801 tttttcatca cactattata gcagagtttt ttatatttaa atagaattta aatttttatt
    19861 tgattaatgg caaccacaac catcgctaat agcatgtaaa acagcttcat agtttggctc
    19921 tgttgttatc tcgctaacta tctctttata ttttacaact ccgtctttgt ctagtacaaa
    19981 aacagctctt gtaagaagtc cttcaagtgg gctatctttt acaagcacac cgtatgcatt
    20041 accgaatttg gcacctctaa aatcactacc tactctcaaa ttttcgatac cttctgtagt
    20101 gcaaaatcta cccatagcaa atggaagatc catagatata atgcttatag atactccact
    20161 tttgctagcc attttttcat taaattttct agcttcagct gcgcatactc cagtatcaag
    20221 tgaaggcact acaactaaaa cttgatattt gcccgtagct ccgcctactt tgaatgtaga
    20281 aagatctttg cctaccaact caacttctgg tgctacttga cctacattta cactatttcc
    20341 gcttaaagtt accggattac cttggaatgt tacatttgac atttttttat ccttttaaat
    20401 ttgatttaaa aattataaca cacaaaagat aaataaactc ttaaaatatt aattaaaagt
    20461 tatcttttag tcactacaat agtactcgta agcaaatctt gaatattacg cttatctttc
    20521 ctaaaaaaac aaaatagtga tccgccaaat ataaaagtag ttataaaaag aatatagcgg
    20581 agcatataag agataaatcc ggcttttttg ccatctaagc tcacaagata tatattttgt
    20641 gatctatatc cggggctttg agcattaagt gcaaaaaata gactttggat aacaccaaaa
    20701 accaaccaaa caccaaatat ggcaagctga ttatgctgaa aatcattttt accgtctaaa
    20761 atcaaatatg ttgttatata taaaagaggc acggctataa gaaacatatc tattataaaa
    20821 gcctttactc ggcttataag agcagacgga acggcttttg gtttttggct catcagttgc
    20881 cgcgacttcc tggttttata gctttgctgc cggttttaca aagagggcac tcttccggag
    20941 tataaatttc aaactcaaaa tttccaagag caaatagagg tttatcagca ggaagtttac
    21001 aacttgattt gccttcgttt ctcatattat gaactttaca aaatcctcta tttgcaagtg
    21061 ccgcaaatcc aaccaccacg ccgcctaact cttctataat cttagcgctt tcaagagctg
    21121 agcctccagt agtgataata tcttcgcaaa taataaattt ttcgccctta gcaacgctaa
    21181 atccgcgtct taagctcatt actttttcta ctctttcagt aaatataaat cttttagctc
    21241 cggcacgcgc cagctcatat ccagctaaaa ttcctccaag agcaggagag caaacactat
    21301 caaactccac tcctgcgttt tttataactt caaatagctc gtctgctaat tttccggcta
    21361 aaataggatt ttctaaaacc tttgcgcttt gcaaataata ctcagagtgg tttgcgctgc
    21421 tgagtaaaaa atgtcccttt aaatacgctc ccgcatcacg gtaaatatct tctaagttca
    21481 taattaaacc tttaaaagct ctgcttcttt gtctttaacg agttggtcaa tctttgatat
    21541 ataactatct gtgatttttt gaacctcatc atagcccttt tttatttcgt cttcgctaac
    21601 tgatttatct ttttctattt ttttgatatc atcgtttgcg tcttttctaa tatttcttat
    21661 ggcaactttg gctttttcac ccatagatct cgcctctttt gcattttttt gtctatcttc
    21721 tgtagtcata ggaggaaaaa atagtttaac gctatctcca tcattatttg gatttactcc
    21781 gatatttgct gcttgaatag cagaagatat agcttttagc atggttttct cccatggaga
    21841 aatagatata gtactagcat cggtagcaag caccgtagct acttgattca acgcagtagg
    21901 actgccgtag taatcaacat ttatatgatc tactatattt atatttacct tacctgttct
    21961 aagagtggta aaatcacgct tcaaaacttc taaagcttta tctgaaaatg ctttttggtt
    22021 tttataaatt tcatctaaca tttttatcct ttataatcat ttgggttgtt gttttgtgac
    22081 cgtcatttat tattactcta actcgtcttt ttgtaagctt ttttgagata tttacatcta
    22141 taataccatc actcacatca actctcatag atcccaagcc gcttatatat aattgagcag
    22201 atgtagagtt tgaatctatt tttgctatta cattatctaa aatagaattt gatggatatg
    22261 ttaatggctg tatgaaatca gcttttaaat atctgcttga caacatcgcc tttaaatttg
    22321 ttccgtccat agacggtatt ctatctaaat cgcctatact gctactagca gatacggctc
    22381 ctgagttttg gttaaaacta gcttctaatc catactcttt tgccatatta gttatagttt
    22441 gattatactc gccataagga tagctaaaat actgtggttt atatcctaaa ttatgttcaa
    22501 aaatttggat gcctttttca aaatcatctt taatttcaga ctcgtttaaa tatgtcatat
    22561 atttatgtga atagctatga tatcctatct cggcacccca gttctgcaca tcttttatat
    22621 catcaaaact catataatcg ccgtactttt tctgcgaagc ctcaacataa acaaaaaggg
    22681 taaatggata tccaaattcc ttaaaaatag gaaatccgtt tttataaaag cttttatatc
    22741 cgtcatctat agttaaaacc aaccaattat ccggtatata ttctgaattt ttaacttttt
    22801 gaattaactt tttaagcggc actatctcat atccgttttc attaaaatat ttaaactgct
    22861 cgcgtaaatt ttggagcgat atattagtac tcggatatct atcgtcgcca aatctatgat
    22921 atatcaagat atgggcatct gcaaacatcc aagttgtaaa caggaaaaaa gataacaata
    22981 accgcattag ttggccggtg caactggtgc tgctggcgca gccggagtag ctccagtttc
    23041 tggaattatc atatttttaa actcttttgt ctctacaact gaatttctta aagattgatt
    23101 ataagtataa cctagtgcta atgtatttaa tacaaaaagt agtcctataa aaaatgtaaa
    23161 tttagccaaa aatccagcag gacctttagc gccaaataaa ctttcattgc ttccgctata
    23221 tgcgccaaga cctattgaag agcttttttg aagcaaaata gcgatagtta aaattacagc
    23281 taatataaat tgtaaggcta gaaatattga actcacgagt atccttttat tttgtttatt
    23341 aactcgtgat tatatcaaaa taagataaaa atttagttaa agcttagcgc cgccaagaag
    23401 cagcgctatt ttattctatt cgtttttatt aaatatgcca agaagttgca ataatgatat
    23461 aaataaattt aatatatcaa gatataacgc aacagctgcc aaaacaggac tatcatatcc
    23521 gccacgtatt atcatctgag tatcatacag tatatatgcg ctaaaaagta tagctccgat
    23581 cgccgctaca actgtcgcta aaagagcact ttgaaaaaat aaatttagta agcttgctac
    23641 aactataact atcaaagtta taaatagcat ttttcccata gctgagaaat ctttttttgt
    23701 attaaatgca aaaacagtca aaccgccaaa agcaacagca gtcattagaa acgcttgagt
    23761 tatgatattt cccattcctg caccgatata tgtatttaat acaggaccca aagtaagacc
    23821 gctaacaaac gtaaaaccaa atagcataac taatgccaaa cttggatttt tctttgaaaa
    23881 cataagccca aatagaagtg caaactccac tataagcagc atccagctaa aagtttttat
    23941 ataatctacg ccgatataag ctccggctgt tgcagctacc aaagacgcag taagaagctg
    24001 ataagtttgt tttacaaaag tggctctagc actttgcaaa cccgcttctt cataattcgc
    24061 ttgctctttg gcgtaatttc tatcataaag actcattaat tatctccttt tttgaattta
    24121 tatgagtgta tcaaaaaata tttaatataa gataaatttt atattaaata tattatttaa
    24181 gttttagagt ataaatattt tttaagctat atttttaaat tttcaaaaaa ttaaatttaa
    24241 ttcatcaaac tttattcata atcttaaaat atctctttat ttatgttcat taaatttcaa
    24301 tagtgaaata ggataaaatt ataatttaac tttgatatat tgaagatatt ttttaaattt
    24361 aaaaaagtat aaatttagtg gccgggagaa agggattcga acccctggag gctttcacct
    24421 caacggtttt caagaccgcc gctttcgacc actcagccat ctcccgaatt aacattaatc
    24481 tgaagttttt tcttctaccc agtcagcgct ttgattgacc tttttctttg accattgata
    24541 agcactatta gagtcttctt ttataccatg ccaagtgctt gaacagccta aaaatgcagt
    24601 aattataagc gtcataacaa agtaacgcac aattaactcc tattttatca tggaggcgac
    24661 acccagattc gaactggggg taaaagcttt gcaggcttct gccttaccac ttggccatgt
    24721 cgccatgcaa acaaatacta aatttggtgg tgcccagagc cggacttgaa ccagcacgga
    24781 aaaaatatcc gagggatttt aagtcccttg tgtctaccat tccaccacct gggctaaata
    24841 aaaatggagc gggaaacgag attcgaactc gcgaccccaa ccttggcaag gttatgctct
    24901 acccctgagc tattcccgca aaatttttaa gagttgaaat aatatcaaaa caaagcttaa
    24961 aattttattt gataaaatta gaaaaatatt aaatttcaaa aaaatataag taaaaagttg
    25021 gtaatattcc aaaacacgaa ttattcgtgt acatttactt aggggttata gctcagctgg
    25081 gagagcgctt gaatggcatt caagaggtcg gcggttcgat cccgcttaac tccaccattt
    25141 ttaaatttaa ataatccaaa atatcttact ttagtataaa aaatcatata aagtttaaaa
    25201 acaatagctt aagcaaatat ttagtttagt gtaacaaata tatatttatt tcatattaat
    25261 ttataaattt ataaaaaatt taaattttat ttaaataaat tagaataata tatatttaag
    25321 aaaataataa aggaatatta tgaaaaaaag cgataaaatg gttataatcg cattgtgtac
    25381 atttttaaat agctatattt ttgcacttga accaaatttt gaaaaagatt tagatattat
    25441 aaatacaaaa tctgcttatg agcaaggcat aaccgggcaa gatgtattta taggcatatt
    25501 tgatgatgat tttaggttag aacatagtag tttaaatgat caaatactag aagctcttac
    25561 ttttagtgat caaactaaag caaattattg gaattataat tcacacggtt cccaagtagc
    25621 cgcaatcgct ctaggagctt ttaataatcc cattatgcat ggagttgctt ataacgcaaa
    25681 aggttatgga atgcaagctc ctgcctcgct tgatgcattt aatcacatta aggaaaattt
    25741 agatgcggag tataagtttt tcggagatcc aaataaaaat attaaaatta taaataactc
    25801 atttggagat tttgtatttc ctattttgca tatcgacgct actgaagatt tttatgaatt
    25861 aacgcaagat gaagtcgagg attatataat cgaagctatg gatcaaacaa atgcaaactc
    25921 atctataatc agactgtcga aagaaaagaa aattttaaat atttttgctg atggaaactc
    25981 aggcatatct tctccatcta ctttggcttc tttgcctcat tacgatcaag atctcaatgc
    26041 ttggctagct gtcggagcta tagattcgtc taaagtaacg aagttgggcg atgagggatt
    26101 tgatatgagc aaaccttttg catttacgga ttttagtaac gcttttaaag gaacggctta
    26161 tttttctata ttaactcctg gtgaatatat ctggtctgcc gatagcgcca ctacaaatgg
    26221 tttcgtacca gaacaaggca catctatggc tgctcctttt gcaactggag cggcggcttt
    26281 agtatctcaa aagtttcctt ttttaaacgg caaacagata ggagatctgc tgcttagcac
    26341 tgcaaacagc aatataaaac tgccaaaaat ggttttaaaa aatatcacaa acaataaaag
    26401 taaaaaacta tttgtaagct taatttacgt agataatgca attcctacta tggcagacgg
    26461 ttctcttgat tggacacaga taaataaaga taggatagaa gcgggttata cagatgagga
    26521 gattgcaaaa ttttatacgc agtacttcaa aaaatactct atcaaaacaa cagacaaaca
    26581 aattcaaaaa tatatcgctg aacaaataga ttttattagt gatataaata atattcaagt
    26641 atcttctata accaaagaag aacttatagg tcaaggtatc ttggatatca aaaaagccat
    26701 gaacggacta gcgcttttag acgcaaatag acttactcta aatgatattt taaattatgg
    26761 aaatgaacaa gcgctttatt acactataga cacaaatgga tataacgcta cttttgcaaa
    26821 cgatatagcc caaagaaaat ataatccgct atggcactat aaaggcggag aatatagtat
    26881 gcatgatcta aacgtaggat ttataaaaga cggtggcggt attttaactc ttagcgcaga
    26941 tgcttttttt gaaggaaata ctatagtaag aaacggggga ctaaagctgt ttagaatagg
    27001 caataaaggc ggagagatta aaaatagtaa tgtttttgta gagcaagccg gtacattaag
    27061 cggaaatgga attatccaaa aaaatctgta caatcaaggc atagttcgac caggaaatga
    27121 agatttaagc gatttaatcg taaatggaac atatactcaa aacggagaaa atgcatcact
    27181 tcagatagac gttgcaaatt tagctaaaaa caactctaaa ttaatagcta ataactatga
    27241 tatcaaaaac tcaaagcttg tgtttatacc tcttacggat acattttatg aaaaaaatac
    27301 aaaaataaaa ctagatttag gaaatttaaa aaatcattta aattcattta gcactatagg
    27361 gttagaaaaa tccttaactt tggattttga tatatctcaa gacaaagaaa gtattgtatt
    27421 taaaggagtt aaaaacggag cttatgatat aaaaaactcg ggcatcggag caagtttaag
    27481 agatattcgc tataagctaa atgatccaaa tttaaataga caaaatctct ataaagattt
    27541 ttttaaaaac ttagatacaa gcaaagatat aagcagtata caaaacacgg taaaaagtat
    27601 agataatcaa agctatctat caaatatctc ggctttaata gaagatcaag caaaaattac
    27661 acaaaattat actatttttg ctataaataa caatttatca aacacgctct ttgcgccgaa
    27721 caacgactat gctaagaaca aagaatattt ttggtatgcg gctccaaatt acaaaaaaac
    27781 agatgcggat gagtataaag gacgcaaaat aggaactgat tttggttttg gaactagtat
    27841 gagcgacaat ggacaaattt cattaaattt aggagcaagc aatacaaaaa ataaatttaa
    27901 cgaatctaat tacgaaacag atagtataaa tgcgggtata aactatattt atgattttca
    27961 aaattttaaa gtgctaagcg cggctgcttt aggatacggc aaaaacacgc tagatctaag
    28021 ctcaaatccg attcttagca gcagctcgaa atcaaattat aaccatttta tagcaggagc
    28081 tatgatgggc ttagcaaaag attttgaatt taataatatc attttaactc cgattagcta
    28141 cgtgaattat aactatattt atcaagaagg atttgatata aatagcaata tttttgctag
    28201 aaaagttgat agcatctctc atcatacaac cagtataaat gccggactaa acttagctta
    28261 tttaaataaa aatcaaaaca taactacaaa gctatcgagt tacgctattt atgagtatcg
    28321 tttaagtgga aaagatatca aaaactcatc taaatttata gattttagtt ctaacggttt
    28381 tactcaaaaa tatgaattaa gtgaacattt actcactata ggagcaaatt tagaaatgct
    28441 atatccaaac gacgttttta taagatttag cacagcagca aatatacaac aagatgcaaa
    28501 aagcctaaat ttgacggcaa caataggaaa aatgttttaa ccagatatta aataccggtt
    28561 acgtaatcgg tatttaatct taaaatcaaa ccgcactcac ctcatcaatg gctcgcagtg
    28621 cgtttaaact ccttgggtag tagatataag aaattaacga agttacgaca tctataagaa
    28681 tttcccttgt gtttcttaaa tttatatttc tgctgcgtga gcttttatct atagcctcac
    28741 caaaaaacgc tctttgtata gctaaacttt tttccttctc tgtcgcttat agtcgttgta
    28801 gatgcatttt ttaaaggaaa cttaacgcca tcatttctaa aaacctcatt acaagcatgt
    28861 ataaaatcat ctatttttac aaaaccgaca taaagagtac tttgatatag aatttatttt
    28921 atctcatttg gcgatacgcc gttttcaaag ccacattaac aactcttttg tactctctaa
    28981 gtccgccgct tgctatcaaa cagccaagcc aaaacataat tatagtttta tcgtctattt
    29041 ttaaatacaa aaatatatct ccgaatgcaa aatttagatg attttctata aactcagagt
    29101 ctgtttttga aaacggatta gtacttccga agaatttatt ataattttta tttgagctat
    29161 cgctcaaatt atccaccttt tttcagtatt ttactctttt gaatatgccg cactagagat
    29221 tattgctaaa gctctcaaat caactgctgt attagcaaaa aatttctacg attttgcatt
    29281 ttaatcctct tttgcctgtt ttattagtct ttcatacttc tcatctctca cgtgttccat
    29341 ccaaatcacg tttttgccat ctctttctct ggtaaaagct atatgagccg cttttgtatc
    29401 aaatccagtg ccgtgaaaat gtttaatatc aggaggacaa agcacaacat ttcctttatt
    29461 tgccgcgcag ttctagatct aggcgaaaac tccgccaaaa gggcgacaag tatcgctttg
    29521 aaaaagcata ctaacgctaa cttcacctgt aaagtaccca ctcctccttt aactcctgat
    29581 gttactatac tttgggtaga agcggtgaaa gcactagcgc cgactaaaat cgtacagaat
    29641 tttataaatt ttttaaacat atattttatt ctccttggaa tttatttgat tatattataa
    29701 agctcgacaa taggtgtttg tcaagagtaa atttaaaaaa caacgctata atttttaaaa
    29761 tttaaaaaag gataattgtg aaaaaagtac tattgataaa cggagcaaaa gatttcgcac
    29821 attcaaaagg catgctaaac caaacgctgc acaacgaagc aaaaaacaca ttgcaaaatc
    29881 tcggtataac agtgcaagaa actataatcg ataaaggtta tgacgtacaa aatgaattaa
    29941 aaaaatggac aagcaatgaa gctatcgtct ggcaaatgcc cggctggtgg atgggtgaac
    30001 cttggatagt aaaaaaatac atagatgaaa ttttcacagc gggtcatggt gttttatatg
    30061 aaaatgacgg aagaagcaga agcaacgcat cggcaaaata cggatcagga ggacttgtaa
    30121 aagataaaaa atatatgttt agcttgactt ggaatgcacc tatcgaagca tttacaaata
    30181 ccgatcagtt tttcggcggc gtcggcgttg atggcgtata tctgcacctg cacaaagctc
    30241 atgaatttat aggaatgggc ggtctgccga cttttatatg caatgatgtt atgaaaaatc
    30301 cgcaagtgga gatatacttg caaaattacc gcaaacattt agaaaaagta ttcggctaaa
    30361 tttgagccga atttaaaggc ttatagctct tgttgtaagc ctaatttatg caactcaaat
    30421 acccaaactc tccagccatt tttttacact agtgctattt gtagttgagc ttaacgcttt
    30481 tgcgtttttg aaatttgcgt tgcaagattt tttcaaaatt tccacgctcg aacgactgtt
    30541 tgagtcgtgc caatcaaggt cggctgaagt ataaatttgc tctggtgtta tctcgtagat
    30601 atcgctgcag cttacctctg ctatagtttt tgcaaggagt ttagtttgcc cgcttactga
    30661 aaaataagcc actaatattt tattcatttt ttctacattt taaaagtata aatttaaatt
    30721 tttaacatat aaagctactt atttatattt gatatatttt gtaaatttga aatagacaag
    30781 ttagatgcga tttgctctgt attaaagaac aaatctcttt tggttttttc tttaaactct
    30841 gttttttggc ggctaatgag accatttggt cataattgat tagataagta tcgaaagttt
    30901 ctagcttcag catatctgca ccaacaatat gttggatata tgaggctaaa atatgtgtat
    30961 ttaaagtgtg taaataatag actacaaggg tttttgaacc actacttgcg aatattttat
    31021 ttggcatatc aataattaaa agcataaatt tgataaaatc tcttctatta ttcatctaag
    31081 ctccttttat ctagtgctaa atgcgctcaa agcaaattta ctcatgcaat acggtgttga
    31141 attgtttgat accctaaatc ctcttatcga gctaaggtta aatatcctag ccttcacgtt
    31201 ttgcgcattt ttaccctcat tgatagcttg tgggagcata aactttaagg cgtgttttgc
    31261 tacaagaaac ggtctgtcaa atttagtctt aattacttcg atatttgcat agtgtttttc
    31321 ataaatttat gcctagaatc ttgcatttta gctccttatc tttaaattta taatcctctt
    31381 tttcatattt tttaccgaat caaggaaatt tttgacttta tacttactct cgctgttaag
    31441 tggtacgaaa agcatttccc tgcccggttt tacaagtgca tactcgccta caagtcttat
    31501 actcatcaca agcaccaaaa accccaaaac aggataaaac gcaagcaaaa caaatcccaa
    31561 agcaaccaaa aaatcaagcg tacctaagac cgattccgat atcttgcatt tttttacctt
    31621 tttttatata atttacctat gaaaagattt acaattttta ttgcactttg catcatttca
    31681 tttattgttt tgctatttac aaacaatgat gagtacataa ttgcttcatc tattatttgt
    31741 gctacgctta tctatctttt tttatacatt gttgatttat tgcctacttg cacaagcaat
    31801 acgttttatc gctttttatc atttatcaca cgcatttaaa gatttgataa tttctatagc
    31861 ttcctttaaa tactctttgt attcgcccac atccatactc ataatttcac tatatgaaaa
    31921 gtgtagaacg tgacctatga gagccacccc atgagtggag tgggctatgc taaaaaactg
    31981 ctcacttctt ttaagaccat agcacagtct tttgcttcca tattttcaag ttcatcttcg
    32041 ctaaggcaag caaggttgct cgttagtcta aatagcagat cactatcatt ttgcccacta
    32101 ccactcatca taaatctcac atcacgacct tttgggtgtc tgatttttac ttccttttta
    32161 tcgctaagcg caataactgt atatttctca ccgttttctg tgagtattac attaccagct
    32221 ccaagcccag ctaaagcagt ctcttctaaa gccctatttg tggactccca cattacatta
    32281 ttgtttttca tttttattgt aatctctatt tcttttccgc tgtggtaaat acttgcttta
    32341 aagagaaacg gaactctatt tgtagctatt cagtcctatg gttagaaact ggtttttgtc
    32401 tatttttgaa acggtaaatt caattttaat agcattataa aacctaacat taggtgtttg
    32461 tcaagggaaa aataagaata ttttgaaatt taattttgtc tatttcttct agctttttta
    32521 tctcggcttt tatagtcgct ttttgctctt ctatcgcctt tggacgcgta gctgtactac
    32581 ttttgccttt tgcggctaat gttatataat gtttgttttt ctatgctcat accggttttt
    32641 ctaaaacaat ccgcccgcat gacccaccca atgtctttgt cgctaaaata attcacgccg
    32701 tttttgttgc gctcgacaaa cgggaaagac cttttcccag ccaaaatcta atagctatag
    32761 ataaaattcc agttttcttt tctacaccta tgatagtttt tgctattttt tgttccttta
    32821 ttcgggtttt ataaggcagt tttcgtaaat aaatttatgc tcatctggca aattttgata
    32881 gatcaaattc gctagatctc ttatctccca taaagctgct tttgagcttc taaggcttaa
    32941 gaaattctgt aagcttctag catttatact ccagcttaac tctgttttat agctttctgg
    33001 aaggcagtat tttgctatat ctaagcttgt attttggttt agaattcggc gcaaattctc
    33061 aagtgcattt atacttgcat tatcgacaaa ttcatttcca gtaagcacga tataaacgct
    33121 tgcactctcg aaatctccga ccttaaactc gctttcattt tttagctctt ttagtgtgta
    33181 gcgcgtggat tttacgctta gacttgctat gcgatgacgg gctaattctt gaagtaaagc
    33241 tctgctaacg ccttttatgt agaagttata atataaatgc tctaacgtac ttgcgtgttt
    33301 gaatttattg cctactctat ctatgagttc gacatctttt tcgccgccat tatcgccctt
    33361 gtcaaaactc tgccaacaag tgcggatcgc atttgaacag acccaaagcg gagtgaaatt
    33421 tagtagtttt acttccataa tattcctttt ttttgaagca attttaccaa atttatacta
    33481 aatttgacaa tctcttttta ataatatccg agaccctaaa cgagtttgca tatatcgtcc
    33541 aagtatatgg aacgcttccg cctgtaggca taaatgaagc gtcgctaaca taaaggttat
    33601 ttatctcgtg agttttacag tttttatcca aaacgctagt ttttggatca tctccaaacc
    33661 ttgctccacc ggctaccaaa tttggcggtg gagagccact aacactataa ctaacgtctt
    33721 ttgcacccat ctgctttaaa atttccaccg cttttttaga taaaaactcg cctacttcaa
    33781 gatcttgttt gtgggcatct aagcttataa cgccaaccgg aatgccgtat ttatctctat
    33841 gagtatcgct aacactaaca aaagtcgtgt tagtgggaag ccagtcgtta aaaacttcaa
    33901 acgtgagttt tctacttgca taaacgttat tttttatctt tttcatgagc ttatcaccaa
    33961 atatcaaatt tccattctca taaaactgcg cagtgacatt agggataacg tttggatgct
    34021 caaacaaaaa gtctataata ccacctttgt atcttttacc atctttttta aactcatacc
    34081 actcttgtat atgtctgtta aaaaacagac ctctgctcat cagatccgcg gcgtcttttt
    34141 gactaagatc ttttagataa aacgttccgc ttccgactcc accggctgaa aatatcaaat
    34201 ttttaccgac gttacctgag ttatttgcta aaccattagc aaaatgccta tttttagagt
    34261 tcaaaagcag tcttgaagtc tcgactgctc cggccgctac gacaaatatc ttagctttta
    34321 tgctatgaga ttttttaaat ttatcgtagt ataaagcctc ttttacgcta aacttatcgc
    34381 taactagctt ataaacaaag gcttctggta taactttagc cgggcactgc tgcaaaaaca
    34441 ctctgccgct ccccttagcc ccgctcgcac aaggataagc accgcaaaaa tgagagtaat
    34501 aacacgcgtt tctaccaaga tcgttcttag acaaaatggc tctaggggtc ggaagtggcg
    34561 ttagcccaag ctctatcgca gctttatcaa accactttgc ggcggcattt tcttctagct
    34621 tttcgtatgg gaactcggcc gtacttctgg gttcgctaaa tttatgtttt acgactttgc
    34681 cagatacgcc tacgactttt tcaacctttg cataatacgg ttcaagctcg tcatagctta
    34741 taggccagtc tgcgacgttt gcgccttcta tctctccata aacacttttt agtttaaaat
    34801 cgttcggttt taaacgatga aaaaatccac tcatcaaatt tgagcttcca cctacaagag
    34861 agccgttcca aaagctccaa gtaccgttat atctacttac ttcgccgttt ggctcttttt
    34921 ctattactat atgatactcg tcttttaaat ttggcgcaaa cattttacgc cttgaaatgg
    34981 ctaactcgtc tttgctaaaa tcctcttctt tataaaactt gcctttttct aaaactacta
    35041 tgctaaatcc ggctctgctt agctcgtacg caacagggct tgctccagct ccgctgccta
    35101 ttatgcagac gtcatatatc atttactacc tttaaattcg gaaatttatt tataaaaacg
    35161 gtgttttggg ctgaggaagt ccggtctcgt gagagatcca tttccaaccg ttttcatctg
    35221 tatttacacc ataaatagga tcactaaaaa ccgcttctga gcaaaaaaca agcatatcat
    35281 atatccagct ttctccccac tcttcatctt tcgaaacaat ttctaaaaga tcattttgct
    35341 ttttatcgga taaacttaaa taatcagact catactgttt tatactaaca tcatttagcc
    35401 aaatcacacc atttacgata aaatttttag ctcctataga aactttagaa tgcgatataa
    35461 taatctttaa atatgacaaa acatctatat ttaactgagt tataatagga aaaagatgct
    35521 ttgaaacact atttaatatg ttataaattt catcttttga cagagttttg tcagccaaaa
    35581 tattttcatc ttgagcaaat aaatttatag gtgcggcaga aaatgccata gccccgtaag
    35641 cgacttttac aaaagagcgt ctatctttca tatctattca tcactgcatc aagactgatc
    35701 ttgccggctc caaacgagaa tatagcaaaa agcataacta gataataaag cggaacttca
    35761 aaaccgttat ttgccaaact atatccattg ccaaaatgta ctgcaaatat cgccacaagc
    35821 actattacga taagtggaac actaataatt ctagtaaaaa gcccaagtgc aaaaagcgga
    35881 accgctaaag cctcaaatat agcgactaaa tatacgctta aaaacggaag tggaaaaccc
    35941 atagaagcaa accactgggc agtcggttcg atattttgcc atttgggaac tgcggtttca
    36001 taaaaaccgt aagctaaaac caaacgtata ataagcaaag agagatgttg gaattttaag
    36061 ccaaacgtat taaaaatatt acagaaattt ttcatttatt aataaacctc gaaagagatg
    36121 catgcggcaa aagagccgca tattttgaag ctataaaaac tatatcaacc gccgcactta
    36181 ctagcgccgc atttttcagt cttatttgtc tctttaggct tttctacttt tgtatcaccg
    36241 catttgctag taccacattt ttcagctgcg cttagcgaag tagaaagacc tatcaataaa
    36301 aatagaccta caaaaatact agttaacttt ttcatagtta aactcctttt aaatttgaat
    36361 tgatacggat gatattataa tatattttaa aatttaaatt tgtgattttc atcacaaaac
    36421 tatattaaat ttagaaatct tttcaactat ctccaaatca aaatatcatc taaattaagt
    36481 ctcattttag caggagcggt ttcatcactc atccccaaag ccacaactaa cacaggtgta
    36541 aagttgttag ttaaatttat aaaatttgtt agtgaaattt tatcaaatcc gcctattatg
    36601 caacttttta tatccatact atatgcgata tttatgagat ttgcacatag caaataacat
    36661 tgcaaacttg cataatgtgt tagctcatcg ttagtttgat gatcaaatct gttagcgaaa
    36721 tatttcatag ctttgttata tttttcaggt atagtttgct ttctttttac ctgattttgt
    36781 aaaaattcgc agctgctttt tagatcattt ctagctagta taataaccgc gtgagaacat
    36841 gcttttactt gatcttgatt gttacaaatt ttcccaagct catctagctc atcagattta
    36901 ctgataacaa caaatttcca aggctcaagc ccgcatgaac taggagtaag tctagcaaaa
    36961 ttcaaaatct cttttatctt tgcgttttct atcttttcgt ttttaaattg tctacacgaa
    37021 aagcgatttt gcattatatt tttcaaggta tatctccttt aaatttaatt attttataat
    37081 tttagcctta gcagataaac tcatgatctt tagttcataa atactaattt tcttaagcaa
    37141 accttgcact gctgtgttga aatactccat atatttagga gtatattttt cgcaaagtag
    37201 gcgcaaagct tctatttttt cctcttcttg cgtaatttca taagctttgg ttgtagctat
    37261 tgcactgcag tattcagtag taaaaactct acctccaagt tcgcttgcgc tgtcttttat
    37321 actttgacaa aactcatggc taggcgtagg tactctgttt tggctaacgg cgactagagt
    37381 aacactcttg ccatctttat acaatcttgc ttttgagcct gtctttgctc catgaatgaa
    37441 aacactcatg ccatctctgg ctacagagat aggaatgcta aatacctcac cgtattcatc
    37501 tacgcagcta agcgtcgcat actcgctctc gtctattatt ttaagggcta tttgtcggtc
    37561 taattcacgg tcgcttcgtc gcataacgct tccttactta atctttttat cttttagata
    37621 gctttctaat ttatcattat ccaaaacttc atcaaattcg cttttacttc tatactctca
    37681 agaaattttt taaaatcagg atttttaatg cttaattcat tcatcacaga ataatctaag
    37741 ctttctttga atttagccct agctaaaatc acactttcat caacattttg cgaactaagg
    37801 ctaataactc ctataccaaa tgaaaaactc aaacgcttaa tcaaatccat aagctcctca
    37861 tcgccctcat cgatatcaag cgcaacaagg taaccctcat tcgcccagct tgaattactc
    37921 acagcttgaa aataatattc tctaaaacta ccaacactta gatatttttt catttcaaaa
    37981 gcatagattt tgattggaag cgaattaaat ttgcctataa atttatttag ctctttttgg
    38041 taatctctat attcaaaact aactccaact atatctggat atagccattt atctatactt
    38101 ttttgaaatt ttttactact ttcgtgatag attgttttag tataagcttt aaaatattca
    38161 cttgtaaaaa taaatctagt taaaagtgaa tgcaaatctc gctcattata tacagtttgt
    38221 ggctcttttt ggactatttg atctactaaa tgttgagatt ttaaatttat atattgattt
    38281 tttagtttta taaacatagg ctttgtacta accacttcaa atataaagtt tggattattt
    38341 tttaatatca acaaatacac gagcataaaa gactgccaag gtgttttacc tcctaaattt
    38401 agttcatcgg ttaatccaaa ttcttttgct ataaaataca ttttattaag ttttaaagcc
    38461 tcttttttac gctccaaaat ctcttttgct acttctataa cagatcttgc tatttcaata
    38521 tctcacctca ttgaaagtta tcttttaaaa atatcaattt gagcttttag atcttcgccg
    38581 atgctcatac ttaacaaatc agaaaacgta tttaagatat tttctaaata tttatcatta
    38641 gttttaaaat aattactaac gctagtggct attttgcgat cataagcgat tttatatgaa
    38701 tctgtcacca ttttaactaa gtttatgatt attcttctaa atttcttatc taaatcatca
    38761 ttttgataat tggaaataaa agctccgtat ttaaaatctc tatttaaaag tattgttgaa
    38821 tcttcaatta actctttttc tgtaacatca ttatttacca gcctataaag aacaccaaat
    38881 aatgctagca taatttgttt accatttttt agaatttctg cttgattgga gcttaaatct
    38941 ccgctggttt tcaaatcttt ttctattgca agatatttat tgtataaagc aatacaatcc
    39001 accacaaagg tttttttatt tttatccgcc atataatttt gcttaaacaa tctattgtag
    39061 gtatcatttt gttcaaaaat agctttttta ccagatcttg cggttcctgg tttttgtaac
    39121 acaaaagaca aaatcatttg accgaattca tcatttttaa tagatacttt tagtttagat
    39181 ggttgtttta cgcctctttt tatttcaaag aaaatacctt cttcagcaaa ttttctactt
    39241 aactgcacca tctccggagt attagatttt aagtctctcg gcaaaattgg tttttgagaa
    39301 tttgtggctt cggcaatttt agtataaaat gacaaattag gatctttctt tttttctgcc
    39361 acaatcttac aaggaacata aaactcttgg ctattattac ctttgtattc cgcaattcta
    39421 ttagttgttt gaccaccatt aacaatagaa aatttattaa gttttataga attaccatcc
    39481 acatcaaaat cttcgcacgc aataacaatt ccattattta aaaaccaaaa gttttctctt
    39541 tctttatcac tactaagcgt ttttctaatg ccatcatcaa caagcttatt aggaatatat
    39601 ttcctaatgt ttaggtcaaa caaacctttt tttgagtatt tattgtacaa attcactata
    39661 gactttgaag acacattaac cataacaccg caagatgtat tagattcata ttcgagataa
    39721 tttccttttt tatcgatcaa aatttttgct tccataacag tttcaagagt ttgttgactc
    39781 tcttctattt tacgctcaat atctgctatt gtatataaag ataccatatc tattgagaag
    39841 ccatgttttg caatttcaat cttatttgtt attgcttgct tgtctaaatc tgatgaagta
    39901 aataaatgat attcaatatt tgtggatcct tcatctggca atctatcaat gaaattttgt
    39961 attgttcttt tgactctatc attatatata ccagtattgc caactgtaaa attatgaatt
    40021 gtactataca tcttatctaa ttcagcaata atgtcagcat atgacaaatt atcagtaaac
    40081 ttagattggc atacaacaac ttttaactct tcttcatcaa aataggcaaa atctattccg
    40141 ccatcatttg caccatccgt tataaaatct tcttgatcta catactccac atcaaagaaa
    40201 tattttaata atacatggct aaaagctcta tcgtctgcta atttttgatt gtttaaaata
    40261 attttagact gcttaatttc ccccaataga atatgactca ttttggactc cttaataatt
    40321 ttatatacta atatctcact ccgttttgtt tcaaaaaatc tcttaaatcg tcgtattcac
    40381 tatttgtaaa gtatcgccat ttgccctcgc ctagttgatc taggctaaca cgaccaaaac
    40441 taacgcgttt tagatccata acttcaagat caaaataccc gaaaaatctt cttaattcgc
    40501 ggttttgtcc ttcgtttatg atgactttta atcttgtata tccgccgcta aaactgatga
    40561 ttttatatgc caaaaatggc ttaaattcca tagaaatttg ctttgttcta gcgtgagcgc
    40621 cttttgtggc atctttagcg aaaaatccct cttgcatcgc agctatgacg tttggagtta
    40681 tctctccttt gatttttaga tagtattctc gctctatatc acttcccata agggcttcag
    40741 cgatcgcagg agcgtcagta agaagcaaaa gtccctcgct agcaaaatcc agcctaccta
    40801 tgcttataaa tttagaaata ccccttggga gattatcata gatagttttt ctaccgcgat
    40861 catctttttt agttactaac tcaccttttt gtttgttata tactataatg ctaaactctt
    40921 tttttagcct tataaatcgt ccgtttatct tgattttatc gtcttctttt acatctgttg
    40981 ctaagttgtc gattactttg ttattgatac taactttacc attttttact aactcatctg
    41041 cttcacggcg tgagtaattt gtgttgtgtg aaataaattt atttatacgc attatagtcc
    41101 taaacttgtt aaatcgtgga tatgcaaagc tccgattggt tttttatctt ttgttatgat
    41161 tagaatttga attttatact cctctatgag ttttaaagca tcataggcta gcatattttc
    41221 atcttctagc acctttggat ttttagtagc aaatttaata gcttgatcat ttatattaaa
    41281 attctcgtta cccaatgcgc gtcttagatc gccatcgctt agaactgcta ctaacaaacc
    41341 gtttttattt gttagtaaaa ccgtgcctaa tttaccatga gtcattgaat taatcgcaaa
    41401 ttttaaacta acatcatcac taacaatagg caattcatct tttctcatca catcttttac
    41461 ttttagataa agtctcttac caagactacc acctggatga agcatagcaa aatcttcttt
    41521 tttaaattct tttaattgca tcaaacacac agccaaagcg tctcctaaag ccaaagtcaa
    41581 agtagtagaa acagtaggcg cggcacccaa aggacaggct tcgcggacta tgtcaagact
    41641 aataaatgca tcgcttaaca tctctagact tgagccgctt tttgccattc ctattatttt
    41701 tataccgcgc tttttaatgt gcggaagtat caatagaagt tcactgctct caccgctaaa
    41761 actaatagcc aaaacagcgt cgttttgact tatcatacca agatcgccat gaagcgcttc
    41821 agtaggatgc aaaaaaaagc taggagttcc agtacttgcc aaagtggctg ctatcttagc
    41881 tcctacaagc ccactcttac ccacgcctga tattatgagc tttcctttgc aagaaagtgc
    41941 taaatttaca gccttttcaa atttaaaatc cagtaattct acttgtcttt ttaactcatc
    42001 tgcttctaag cttaatacct ctttagcgat actcaaaata tccatttttt ctccgtttaa
    42061 atttactatc acatcaaata cacaaccgga acaatggtag ggtacttttt aatctttcta
    42121 aatatatgtt ttctaataac ttgcctaatt tgattttcta acgctctttg atcgtgaagc
    42181 aattcatctt taacattgct taaaaactgc aaaagaacct cttccatctc tttgctaagg
    42241 tttttactct gtctttcgct aaccaaacca tagcttataa cacgattttg aattaaagtt
    42301 ttagcatttt tatcaatctg agatattata gttaccactc cagcctcagc caatttttgt
    42361 ctatctataa caacatcatc agaaatttgc ttattgattt gattgtctat gaaaacctta
    42421 cctgttttta cagtttttaa tctttttata tatttttgac aaacttctat ctgatcacca
    42481 tcgctcataa gataagtatt tctctcatca acaccacatg ctatagcagt ctctttgtgt
    42541 cttactatat gattatactc gccatgaacc ggtaagaaaa atttaggttt tacaagtctt
    42601 agcataagct tttgctcttc ttgggcggcg tgtccactta catgaatttc gctaaagtct
    42661 tgatgagcta cgcttgcacc gctttttaaa agataattaa gcactgttga aacacttgtt
    42721 tcatttccgg gaatcgcttt tgagctgatg attatctgat ctgttggttt gattttgata
    42781 tatttatgtt catcagtcgc cattctatat agcgcgctca tagtctcgcc ctgacttcct
    42841 gtggttacta taagaacttc gttatctgga tatttgctga cttcgtttgc atcgataaat
    42901 atctttttat ctaaatttac atatcctagc tcgatagcag tccaaagatt tctctccata
    42961 cttctaccta taacacaaac ttttctacca tgctttacgc cacgctcaat ggcttgataa
    43021 acacggtgga tatttgagct aaacgtactc atgataaccc tgccttttga tgttgcaaat
    43081 atagcatcaa aagtctttcc tacgctactt tcactctttg taataccctc tttgtagcta
    43141 tttgtagagt cgcttaacat acacaaaacg cctctttctc cataatatgc aagtctattt
    43201 aaatctgtcg gatagccatc aattggagta tgatctatct taaaatctcc ggtatgaaga
    43261 attgttcctg cttttgtagt gataactaac gcgctcgcat ctataataga gtgagttata
    43321 tgaataagct ctatctcaaa gtcacctatc tcataaagtt ttcttttttc tatgggacga
    43381 aaatagcttc tgtgagcctt cagaccgtgt tcttcaaatt tattgcttat cattcctaat
    43441 ggaagcggag ttgcataaat aggaaactgg aattccttaa aaaaatacgg aacggctcct
    43501 atatgatcct catgtgcgtg agtgatgatt atgccgcgaa ctttttgttt tatcttacgt
    43561 atataatcaa aatcaggtat caaaatatcc acaccatgca tactctcgct cggaaaactc
    43621 ataccgatat ccacgataat agcatcattg tcagtctcaa atacggtcat attcccaccg
    43681 atctcgccaa gtccgccaag cggagttatt ttgatcttat gttcgcttga gtttagatat
    43741 tttaatggat taagtcttaa ttcgtgagag gctctatttg cttctataga agcttgcata
    43801 tctttttgcc agccttcgtt tccgctaatt tttacggtat tattaccgtt tttatgtttg
    43861 cgttttttag gtttttttac ctctgattct gctatatctg ttgcgacttc atttgcttgt
    43921 acgttttgcg tattagcatt tgcttgtttt tttagattgt ctctgtggtg tttgtatcta
    43981 tgttttctat ttgttctttc agccacaggg gttttgtttt cttcgttcat tttcagcctc
    44041 tttaaatagt tttaaatata aggcgacact aagctcgtgc ggacgaatag tatgagagag
    44101 attctcagta ttaaaaaata tttctaatct gtctctttga actaaatttg ataaattttt
    44161 taacagagtt tttctaggag cgctaaatgc tacacgtaaa aaattcttga aattatcata
    44221 ttttaaattt aagctcaaat ctctatcttt tatgattcta atgactgatg agataacttt
    44281 cggcggagga ttaaaagcac tacttggcac atcaaaaagc aactcacatt tgccttttaa
    44341 ccatgttaaa atagccaaag aactaaattc tttatcgccg gcttcgctac taaattttat
    44401 agcaacttca cgttgtatca tcacaactaa acctttgcaa tttttatcgt ctatagcttt
    44461 taatatcata tttgttgcca cgtaataagg caaatttgca accaaaaaat actcacttgc
    44521 gcttagttta tcccacgcat ttaaagcatc tgagtttatt atatttaact ttccgctatc
    44581 tagttcgctt ctaaatttat ctaataaaat tgtataaagc tcactatcta tctcaaaaca
    44641 atcaatcata ctgtctaact taacaagctt ttgtgttaaa tcacctaagc caggcccaat
    44701 ctctactatg cgcttaacat cgttgggaat cgcttggatg atttgatttt ttatattttc
    44761 atcttgtaaa aaattttgac cgaatttttt ctttactttt atcatcgcgt ttatgctacc
    44821 tgaatttgac ttacaaacta attaaattta attttcaaat ttaaataata actttttatt
    44881 atccaccata
//
LOCUS       DAPPKW010000004        41748 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.004, whole genome shotgun sequence.
ACCESSION   DAPPKW010000004 DAPPKW010000000
VERSION     DAPPKW010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 41748)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41748)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41748
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.004"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            51..251
                     /gene="thiS"
                     /locus_tag="RPW04_000200"
     CDS             51..251
                     /gene="thiS"
                     /locus_tag="RPW04_000200"
                     /inference="COORDINATES: protein motif:HMM:TIGR01683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HDX6294328.1"
                     /translation="MKIKINSNIIDIDENLSLKKWLETNGYNLDRIAIECDGEIISKS
                     VWNEFILRENLSLEIVEFVGGG"
     gene            388..1191
                     /gene="thiF"
                     /locus_tag="RPW04_000201"
     CDS             388..1191
                     /gene="thiF"
                     /locus_tag="RPW04_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002945925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS adenylyltransferase
                     ThiF"
                     /protein_id="HDX6294329.1"
                     /translation="MKTIKINSITRQTNANNLNELRNELGISSDMLTIYKGFATNDNI
                     ALNDNDSVVFIKKGEMPPKEFLEEMMSSRNSPEINIALKSAKVGVAGLGGLGSNVAIA
                     LARVGVSYLKLVDFDTVDPSNLNRQQYFIKDIGRFKTEALSETLSLINPFVKVEFETI
                     RLEETNVNEVFQKCDVVAECFDNPKSKAMIINSLTKKMIVAASGMAGYGRNEDIKTIK
                     MANNLYVCGDLVSAASIGNGLMAPRVGICAMHQANKILEILIDKVKQNG"
     gene            1184..1945
                     /locus_tag="RPW04_000202"
     CDS             1184..1945
                     /locus_tag="RPW04_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HDX6294330.1"
                     /translation="MDELVLGGVSFSSRFIMGSGKFDPELISACVEDAKAQIVTLALR
                     RVNKDKDSITEFIPKNVTLLPNTSGARNADEALRIARLSRELGCGNFIKVEVIRDSKY
                     LFPDNYETIKATEKLANEGFIVLPYMYPDLTCARDLVNAGASAVMPLAAPIGSNKGLI
                     NRDIIQILIDEIDIPIIVDAGIGRPSEACAAMEMGCAAIMVNTAIATSKDIRAMAKAF
                     CEAIIAGRTAYKAGLGRVKNIASASSPLTGFLGEN"
     gene            1967..3127
                     /gene="thiH"
                     /locus_tag="RPW04_000203"
     CDS             1967..3127
                     /gene="thiH"
                     /locus_tag="RPW04_000203"
                     /EC_number="4.1.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HDX6294331.1"
                     /translation="MRDRTDHMRYLPHQEVISHDVMNKIFKEWEETKFENFTQDDVIS
                     AINANNKSIYDFKALLSPEAAPFLEDMAKEAMSIKERHFGKNIYLFTPLYIANHCDNN
                     CVYCGFNVHNKIKRAQLEEDGIIRELENIAKSGLDEILILTGESQSKTPLSYISRACE
                     LAKRYFKVVGVEIYPLNSDEYAFLHKCGVDFVTVFQETYNPLKYEKIHLEGNKRIFPY
                     RLNAQERALMGGMRGVAFAALLGIDDWRKDALSTGLHAYLLQAKYPHAEISISVPRLR
                     PIINNKKINPKDVGERELLQVIVAYRLFLPFANITLSTRESAHFRDNAIKLGVTKVSA
                     GVSVGIGEHGGKKDEQKGDSQFEISDGRDVEEMKRSIRKAGLTPVMSDYIYV"
     gene            complement(3177..3794)
                     /locus_tag="RPW04_000204"
     CDS             complement(3177..3794)
                     /locus_tag="RPW04_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HDX6294332.1"
                     /translation="MFIVNQIYTGSKEIKKSNFISYLCPINEFETLHKKLKEDHPKAA
                     HIVWAYRNYNKHFQIVENSSDDGEPKSSSGPPCLDVLRGANLINTGVFVVRYFGGVKL
                     GVGGLVRAYSSSANLVINNANLIKFEVQDECLFFIPFALLARFNHYFEKHGVKDEKKE
                     FVEQGSIYTFKFKKEDFEEFFKFAKDFEIDGFYFLAVPIFAKEII"
     gene            3870..4700
                     /gene="galU"
                     /locus_tag="RPW04_000205"
     CDS             3870..4700
                     /gene="galU"
                     /locus_tag="RPW04_000205"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011992568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDX6294333.1"
                     /translation="MIQTCLFPAAGYGTRFLPATKSLPKEMLPILTKPLIHYGVDEAR
                     EAGMKNMAFVTGRGKRALEDYFDISYELEHQIAGTKKEYLLTGIRDLMNSCSFSFTRQ
                     SSMKGLGDAIYTGRTLVGDEAFGVILADDLCINEDGENVLAQMAKIYEKYRCSIVAVM
                     EVPKESISSYGVVNGKFIEDDLLMVNDMIEKPSPDEAPTNLAIIGRYILTPDIFEILE
                     STKPGKNGEIQITDALLKQAQNGMVLAYKFKGRRFDCGSVSGFVEATNFFYESDNGNK
                     "
     gene            4687..5892
                     /locus_tag="RPW04_000206"
     CDS             4687..5892
                     /locus_tag="RPW04_000206"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDX6294334.1"
                     /translation="MVINELKFPFKDMQNISSYARRMNEELNNDEIGYYHLPSFGEEI
                     SEKLALYRKNVNFNTVVLIGVGGSSLGVKALYEMLNLKTKLIFLDNLDPFYIENRLKD
                     IEFDSSIFILSSKSGTTIEPISIYKYILDLYSPKNYKNFIIITDPQSPLEEYANLHNI
                     TVFNIPKNVGGRFSVLSAIGLVPLGLCGVDTSSLLDGAVSCKKQFLEDDDSLILQKAY
                     HYATHKSAKINVVFSYSERFHSFNDWYVQLWAESLGKKRGYKRMGLTPVGLIGSKDQH
                     SFLQLIMEGIKDKTVTFLILKDHLSSICIPNLKLEYLDECDFVNEVSMSTLLNAQAKS
                     TIQALLSENISIDTILVDRLDEWHSGWLIYYYELLTSATGLMLGVNTYDQPGVEASKR
                     ILKNLLSNN"
     gene            6097..6534
                     /locus_tag="RPW04_000207"
     CDS             6097..6534
                     /locus_tag="RPW04_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002953154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HDX6294335.1"
                     /translation="MTNVVKQLNQIQADAHAFFIAFHDYHWNVKGLQFFSIHEYTEKA
                     YEEMAELFDDVAERAIQIGGKAILKSEELVKLAHAPVMQKDSYTAIEVIEQLRVAYKH
                     LVEEFKKLEAAAEKAGDTTTANIAQDHYGSYEKKIWMLNSTLA"
     gene            complement(6595..7161)
                     /locus_tag="RPW04_000208"
     CDS             complement(6595..7161)
                     /locus_tag="RPW04_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016647263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HDX6294336.1"
                     /translation="MTKRIFGSALCAMLLVGFANAANYDIDVTHSSTNFKIKHLSVSN
                     VTGSFDKFSGIVDIENGIPKKIDAIINVDSINTSNTARDNHLKQADFFDIAKFPEMKF
                     VMTEFKKDGDNEGKIIGNLTIKNVTKPVTLNYEFGGQSKNQKGIQIVGFSLEGKIKRS
                     DFSFAPDTSTLTLGDEIKINIEVEAAAK"
     gene            complement(7324..7704)
                     /locus_tag="RPW04_000209"
     CDS             complement(7324..7704)
                     /locus_tag="RPW04_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HDX6294337.1"
                     /translation="MIYENELICIELEKSEIPWVKVFTKKEFKEISDVDDVTRKWLFE
                     AALITEKTMLDFYCADKINWASFANYVPKVHIHVQARFKDDSFFPESMWGTKQRDGTK
                     RDLNIEKFTNQLVLNLKNYNFIKK"
     gene            complement(7701..8312)
                     /locus_tag="RPW04_000210"
     CDS             complement(7701..8312)
                     /locus_tag="RPW04_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDX6294338.1"
                     /translation="MRNICISGIHTDAGKSCVSAALCYAFSYEYFKLIQAGNITDESF
                     VKKIVPNLKSHSPGVMLQTAASPHVGMINENIHFDGLKIKIPKPDDILVELAGGLYCP
                     LDDKFYMIDYIKTANLPTFLVSKNYLGSINHTILSIEALKMKNLEILGVIFSGSKDEQ
                     SENYLKKQFKDLHFFNLENFDETSFEKASLRLKEQIIKARVKL"
     gene            complement(8309..8998)
                     /locus_tag="RPW04_000211"
     CDS             complement(8309..8998)
                     /locus_tag="RPW04_000211"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294339.1"
                     /translation="MKFEKAINYEEFAVAQKFAALNLINLLKKYTQNFKNVYEIGAGS
                     GVLTKLFIQNFNYEHLILNDIYKSEFMNNFYIDIGDITTKQMPKNIDIIISSSVFQWI
                     DEIEKLCDKIFLSLENNGILAFSMFINGTLNELSSFTKDSLNYKNTDQIIDIFGTKFD
                     ILEYKNGEFIAKFGSLKELLTHLKQTGVNNLNGSFKLTKSNLKSLETHFNNDFKLTYK
                     FTNIICKKGKK"
     gene            complement(8988..9602)
                     /locus_tag="RPW04_000212"
     CDS             complement(8988..9602)
                     /locus_tag="RPW04_000212"
                     /inference="COORDINATES: protein motif:HMM:NF016209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HDX6294340.1"
                     /translation="MKIDIIKKDGKKLILLFLGYSFTPSCVEHLEVGDFALAVIYDYS
                     ELEFDHSFLKDKDIYLVSWSMGVWAANLVLKNIPLKKSIAINGTPFGIDEKYGINAGN
                     FYKTITNYDFENFKKFCFLGIPPEKISNFKFNTNAKFELLNLYKNAIKPCDNNICWDK
                     AIISKKDLIFLPKASEWFTCQKIYINAPHFAFFNFKSFGDIIEI"
     gene            complement(9583..10689)
                     /locus_tag="RPW04_000213"
     CDS             complement(9583..10689)
                     /locus_tag="RPW04_000213"
                     /inference="COORDINATES: protein motif:HMM:NF012382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HDX6294341.1"
                     /translation="MFDIKKAKQESNFRELKISQSHSKFINYRGKTLLNLGSNDYLGI
                     ATNISLRDEFLTIAKHKEWFFGSGASRLVYTSSSEFNELESWFESKFDGKKATIFNSG
                     YCANLSCISAINSPNTLFLADKLAHASMIDALKLAGANFKRYPHNDLLALQNLLEQNQ
                     DKFENIIILTETIFSMDGDLLDIKNLINLKKRYKNVLLYIDEAHSFFIKDELGLAKSS
                     QTDTDVDFLLVTLSKAVGGEGAVILSDKEYKDIFINSARSLIYSTAIPSINIAWTNFI
                     LNKDFSRERTNLEKNIKFLDLGTTHICPFMTYENDKTLELANKIFDSGYFVPAIRPPT
                     VPKHNSRLRISLRGDIEIGELSNLKKILDENRYH"
     gene            10822..11280
                     /locus_tag="RPW04_000214"
     CDS             10822..11280
                     /locus_tag="RPW04_000214"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294342.1"
                     /translation="MKSCIVLYDGISMLSFAKIYDFFIANSVDFEVASLREEITCEGS
                     FKLNSPNYSQSLYGYDIVVFPDGTGALNLSYDDIFLSWIKSANDAKIKIAINRASLII
                     KEAGLFHRQLFMNDDKVTAICEFCVDKDVISMADTSASWQELKEWIKSRV"
     gene            11259..12077
                     /locus_tag="RPW04_000215"
     CDS             11259..12077
                     /locus_tag="RPW04_000215"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HDX6294343.1"
                     /translation="MDKEQSIIDRFSHKLNGDDGAVVGKMVLSKDMFVENSHFKRKWL
                     SAYEIGTKAMLVNLSDAVAMNATPKYALLGLGIPKNISNNYIYEICRGIKSAAKDFNV
                     EIVGGDTIKSSEIIISLTIISYLNSKKPIFRNTSRLGDLVCYTGKLGDSLKGLRILQN
                     GGNLPKNSRFKRPVLRVNFMKKAAPFIHSAMDISDGLASDLPKICSKFGIKFKNILSK
                     DEFRSGEEYELLFTVSKKHLKRMQNEAKKCRLKLNILGKLIKGKYKSYGKYSHF"
     gene            12055..13188
                     /gene="truD"
                     /locus_tag="RPW04_000216"
     CDS             12055..13188
                     /gene="truD"
                     /locus_tag="RPW04_000216"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009496011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HDX6294344.1"
                     /translation="MENTAIFKPLLGTTHSPINAHFSKNASDFVVRENPLYSFSGSGE
                     HLVVEIQKKGMTTSEALTVLSRQSGAKMRDFGYAGLKDKEGMTTQFISMPAKFENEIS
                     KFSYENLKILSITKHNNKIRIGHLKSNSFFIRLKKVLGSEALKLKEALKTIDKNGYPN
                     YFGYQRFGRFGDNANSGFEILNSALNGDKSMFKKANPKLRDFLISAYQSDLFNKWLSK
                     RVEISRFSEDFSARELEDIYKFDKTTIKNLKSQKQFFKLFQGEVLGHYPFGKVFLCED
                     LEAEVAKFGARDRTSCGLIIGSKAYESTGVAKSLEDEIFRDAYKFSSFVSGSRRFAWM
                     WIDNLEYKYNEESAQFSISFALQKGSYATVVLREILGRDIFEE"
     gene            13322..13650
                     /gene="rnpB"
                     /locus_tag="RPW04_000217"
     ncRNA           13322..13650
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="RPW04_000217"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(13663..13878)
                     /locus_tag="RPW04_000218"
     CDS             complement(13663..13878)
                     /locus_tag="RPW04_000218"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294345.1"
                     /translation="MKWLDDFKSALVNEDLNKIEYLINNYPNKMDIEEMQCAAALLEN
                     AAAIYKRKQKELDVEFQKVKKARKYSF"
     gene            complement(13862..14251)
                     /gene="fliS"
                     /locus_tag="RPW04_000219"
     CDS             complement(13862..14251)
                     /gene="fliS"
                     /locus_tag="RPW04_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HDX6294346.1"
                     /translation="MQSNVAYAAYNQNNIGIESPQKLITMLYEGVLRFIYRAKKAIDD
                     GDIETKVQFLNKTNAIFFELINSLDMNQGAISQYLNGLYARQIQLISLANSTNDKAPL
                     DEVIHVTRELLDAWRDVTKEESDEVAR"
     gene            complement(14262..16085)
                     /gene="fliD"
                     /locus_tag="RPW04_000220"
     CDS             complement(14262..16085)
                     /gene="fliD"
                     /locus_tag="RPW04_000220"
                     /inference="COORDINATES: protein motif:HMM:NF009400.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HDX6294347.1"
                     /translation="MAINTEKSQLGLGSSNVLSWDILDKLKSVDTKNLVSTIDTKIQT
                     NLTQQKDLTAIKTLLSNFKSNVSSLTDDTSYLKRSVSSSGSGSATVDASTGVNEQTMK
                     IKVSQLASQDVYQSKKFELKNESVLSPGSAETSFKLSIGSDSYEIEINASTTLEDIAN
                     KINEATDGKIQAKVLNVGGENPYSLVIQSKDSGKDNEISFSYVQDSAGSIDNSKNLMK
                     SLGFMFKDPSTTSPGEKLTMMTEDEIKDAALTDKTIDTSNLASRLQTAQNAIFEYNGI
                     EITRDTNSISDLITGVTIKLNKVDKEGESSNFDIKQNTEGIVQDVEGLVNSYNNLMNN
                     LSVATSYNSETGASGTFQGVSEITQIKSKINQIINGVSKDGKSIQDFGLSLSSDGLLK
                     LEASKLKDALSNNFDNFKNFFSSKTEYTNVSTTGTKAVEAGELQGSLTINGKNIDIKT
                     DSANNSNQNAKDILKAITSAGIDNIAVTIDKDGKLVIKGSGGENLEIKGDSTFLEKLG
                     LKETELKGSSEVTGGFFKQLKDTLDSFIGTKGSLVTYEESLVSNNKQLTKEKTNNEES
                     ITKKYETMAEKWVQYDSMIAKIEQQFSTLKTMINAQLNSKS"
     gene            complement(16089..16469)
                     /locus_tag="RPW04_000221"
     CDS             complement(16089..16469)
                     /locus_tag="RPW04_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004276925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlaG"
                     /protein_id="HDX6294348.1"
                     /translation="MEIFKVASQQIDNSVALNTKQNSNQTREVEQAKIQQNVAQERSN
                     QNKGNNEQDSKRISDIVNKLNDNMETLNTNIRFGFNDKISSMYVSVTEADSGKVIRKI
                     PTEEIMKLTEHFKEIVGVIFDKKE"
     gene            16590..16937
                     /locus_tag="RPW04_000222"
     CDS             16590..16937
                     /locus_tag="RPW04_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDX6294349.1"
                     /translation="MKISIECDCVLLAQSLRLFLDGYYAPKKECDFIISDKKTVSDKP
                     VFIISEKSPYLSVPFTKDTLLNTLEEFYSAMQIRNQNYVKKSPSSLEERVSNLVDNFK
                     RDLINIIKDEYEK"
     gene            16921..17502
                     /gene="rsmD"
                     /locus_tag="RPW04_000223"
     CDS             16921..17502
                     /gene="rsmD"
                     /locus_tag="RPW04_000223"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HDX6294350.1"
                     /translation="MNMKSSLTTTISSGRFKGKKLFLPSLNTTRSTKSIVKESFFSAA
                     RQDIVGKVFIEVFGGSALMAAEALSNYAAKAYAVELDRDSYKFTKKNIDNLNDQNILA
                     INADTFKITPQIVNENDDIVLYIDPPFDIRDGFGGIYERVWDMISALDKSKIFLIVLE
                     HISTYNSPDSCAGFSKFKSRKFGKTTLSYYKQH"
     gene            17564..18613
                     /locus_tag="RPW04_000224"
     CDS             17564..18613
                     /locus_tag="RPW04_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HDX6294351.1"
                     /translation="MKIFIKIISFALLLSTINAAQIKDLASIVGVRDNQLIGYGLVVG
                     LNGTGDGSSSEFTIQSLSNMLQTVNVKINPNDIKSKNTAAVMVTAKLPPFARQGDKLD
                     VTISSIGDAKNLVGGTLLLTALKGVDGDIYALAQGALTLGGGTSKGGNHPTVGTILAG
                     GLVEKEVNFDIYTQQSANLSLKNSSFQTAVGMQNAINTKFGVQAAMAIDPRTVKLTKP
                     ANTNMVEFLAKVLEVDMDYKADEKVVIDERTGTVVSGVNITIDPVVISHGAITIKIEP
                     NAYNPAAANANDVDIGGAAIDTTTNTLKIDAAKTTVANVTRALNKLGATPKDIIAIIE
                     NLKRAGAIHAGVEII"
     gene            18614..18913
                     /locus_tag="RPW04_000225"
     CDS             18614..18913
                     /locus_tag="RPW04_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod-binding protein"
                     /protein_id="HDX6294352.1"
                     /translation="MQVDNSLALDSYNSLSTSSINSNLKDSKNDELLREQTDAFEAFL
                     LKEVLDISIKNENSLFPQDAGDKIYSSMYNDTMSKALSGGLGFSEMLFNFLKERN"
     gene            18970..19173
                     /locus_tag="RPW04_000226"
     CDS             18970..19173
                     /locus_tag="RPW04_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002953309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis anti-sigma factor FlgM"
                     /protein_id="HDX6294353.1"
                     /translation="MISSVGVGAAYSGLSAPKNETKKSEQTTQTQSSNNDSKVATIAK
                     EINDGTYKVDIDKLAKKIADSLM"
     gene            19212..19646
                     /gene="flgN"
                     /locus_tag="RPW04_000227"
     CDS             19212..19646
                     /gene="flgN"
                     /locus_tag="RPW04_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FlgN"
                     /protein_id="HDX6294354.1"
                     /translation="MLEKYLDDAVLHLEELIKITKADIENIKNADHSFVAEHTRLKSE
                     LIKKFENTKTLLDNELVKLAKENNGTDLADILCDDIKEKLSKLRESLVSLQKVNKEYA
                     KSVIVVKEFYDSLLKSMFGSDSGSGTYGSESLSPEQLFKLRV"
     gene            19648..21501
                     /gene="flgK"
                     /locus_tag="RPW04_000228"
     CDS             19648..21501
                     /gene="flgK"
                     /locus_tag="RPW04_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HDX6294355.1"
                     /translation="MGIFDSLYTGASGLNAAQLQIQVTGQNITNINSDYYTRQRVVQS
                     ATTPLHTSPGDVGMGTRIDTIIRIHDEFTFDKLKTATTNKENTAYKQQVLQEIAQRFP
                     DLKDTGLLKDIENYFGAWNNFASHPYESAQKTNLLNLTSTLTNRLNDTSSQLKTVHNN
                     INEQVKLAVDEINRIGKQIADLNAQIQKVETGTTQNANDLRDKRDQLELTLANILNIS
                     TFKNDISSNSTFGGTLTDQGRNYNLNIDGITLIDGVNFHPLTLDTNGNKDGFTNIYYE
                     LNDGTRVDMASKINSGKLGAMLDLRGRTMGDNGEVKDGMITEFRNNLDTFAKTLIIQT
                     NNIYASAAQEGMSSTDLSQMKPNTTLQNFDQNVQSGNFDVIIYNSQGVEVARKTINVN
                     SSTTMDDTKQGNSIVGDFNSDTDDNNNGNLNDDVNDFFTAKFNYDEKTGLGHLSFSPL
                     FSSGEYTMAIEDKGTNFPGVFGMSQFFEGDSASNIKIESSLASDTSKIKGNKAPVDGD
                     NSMANAMINLQYQSLNFYANDGTIRSETITGYYRYLTTDIASKTESVNALNNTNLSLY
                     KSVNAEFQSISGVNMDEELGNLIKFQSSYGAAAKIVTTVEKMLETLIGMKQ"
     gene            21504..22280
                     /locus_tag="RPW04_000229"
     CDS             21504..22280
                     /locus_tag="RPW04_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02757 family protein"
                     /protein_id="HDX6294356.1"
                     /translation="MNYGLKEILERALKEKNTLENLYLEADPLQVAAKFKNVHISLIC
                     ALFAYGNAKAIVKFLNSLDFELLSLSDQIIEKEILAQKRLYRFQNPKDVSNIFITIKR
                     AAQEDIQAIIKSGFDKNGLMIDGINSLINKIYDLNDYRSDGYEFFFGRSYQNEPKSPY
                     KRYNMWLRWMVRDSDIDLGLFKNLPKSELIIPLDTHTHKVSLALGLCDRKSYDFKAAK
                     EITLNLKNFDAFDPIKYDFALYRIGQSKELDNVKSNLKNI"
     gene            22354..23721
                     /locus_tag="RPW04_000230"
     CDS             22354..23721
                     /locus_tag="RPW04_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HDX6294357.1"
                     /translation="MFDTIFREYDIRGIYEKDLNETSVKAIGYCLGVEMAKRDVKTIS
                     VGYDARLSADTLFKYLISGLNEAKMRVFDIGMLPTPVGYFSVFTDVFDANVMITGSHN
                     PKEYNGFKITTHKDSFFGADLQKLKDSVNELISSKKQIKDNFEAQKYDILSKYVEFYK
                     NEFSHLTGLKTKIICDCANGTAGITLEPIIQALSLNATIFYKEPNGNFPNHHPDPSEE
                     KNLKDLKNALSGEYEIGFGFDGDADRIAVLTKKRSIKGDELAYLYAKNMKNPRVLGEV
                     KCSQNMYDEIDKIGKSFMGKTGHSNIKKAMKELNIDMAAEVSGHIFFKERFFGFDDAV
                     YAMIRVLELIAKGFNLDDELDSLPKLYSSDEIKIDTTEEMKFKIIDELKKELHNTKNG
                     LPKIVDVIDIDGVRIKFENGWGLVRASNTTPVLVARFEAGSLETKELLEQKVLSLVQK
                     LKAKI"
     gene            23718..25052
                     /locus_tag="RPW04_000231"
     CDS             23718..25052
                     /locus_tag="RPW04_000231"
                     /EC_number="2.7.7.13"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011980017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HDX6294358.1"
                     /translation="MTNVILCGGSGTRLWPLSRALLPKQFVKIFDNDSLFSKTLKRNT
                     FAENRIIICNESHYFLALDECGGNSAKFILEPFGKNTAAPIVFCALSVDKDEILLVTP
                     SDHLIELEDEYNRSIKAAVELANDGKLVTFGITPNEPNIGYGYIKADGNNVKSFIEKP
                     SLKKAKELLAQGDCYFNSGMFCFKAGVFIDQMQKYAPNILEQARQAILNVENNSDIMR
                     IKPQYMQNIDDISIDYALMQKSENIAMVPLNARWSDMGSFDELSKKVQSSPSTSIDAN
                     NNFVISYKNSALVDVDDLIIVDTKDALLVTKKGSSQKVKNVYNLIKKTNPNLCEIHTK
                     AYRPWGSYEVLEDAPNFKIKKIIVKPYKRLSLQKHLHRSEHWVVVSGEALVTIDYKET
                     LLKNNQSIYIEKQKLHRLENKLDTDLILIEVQVGDYLGEDDIIRIEDDYSRT"
     gene            25052..25723
                     /gene="queC"
                     /locus_tag="RPW04_000232"
     CDS             25052..25723
                     /gene="queC"
                     /locus_tag="RPW04_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDX6294359.1"
                     /translation="MVNLKKAVCVISGGMDSALAAYKAKNSGYEIVALHFDYNQRTMN
                     KERECFNLICDDLDVEKRFILDVGFIAQIGGNALTDKTLNIPKDGISENIPITYVPFR
                     NGIFLSIAAALAQKEGCEAIYIGVVEEDSSGYPDCTEQFINSINKAINLGTADNNIVI
                     KTPLVHLSKGDIVKEASSLKVPLELTWSCYENSEFACGTCDSCRLRLKGFKEAKLSDK
                     IPYKS"
     gene            25816..27105
                     /locus_tag="RPW04_000233"
     CDS             25816..27105
                     /locus_tag="RPW04_000233"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDX6294360.1"
                     /translation="MYRFAPSPTGDMHIGNLRAAIFNYICSLQDNSGFILRIEDTDNA
                     RNIDGKDKEIFDILTKFNIKWDTLYYQSKNLKFHQEFAAKLLAEKKAFLCFCDETTLE
                     SKKEAAKTAGKPYRYDGTCENLSDDDVLSNPRPAAVRLKIKNEPQSFYDAIKGEVKFE
                     PQNIDSFVLLRADKTPTYNFACAIDDMLEGVTFVIRGEDHVSNTPKQNLIREALGYTG
                     KIGYAHLPIILNKEGKKMSKRENSSSVKWLLNRGYMPEAIANYLILLGNKTPCEIFTL
                     EESLQWFSIKNISKSPAKFDEEKLAQINREHIKKASDERLKELGLSKPHLARFYTQEC
                     SLISEIKDKIDQIYSKKDISDEWKQNANLIKDAVLNSNIPNNFDELKNEIIQITNLKG
                     KSLFMPFRLLLTGSEHGPELKELYALIKDDIKEIIAK"
     gene            27105..27401
                     /locus_tag="RPW04_000234"
     CDS             27105..27401
                     /locus_tag="RPW04_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HDX6294361.1"
                     /translation="MVISTFIIALANLLHIVITAYTWIIVAAALISWVNPDPYNKIVQ
                     FLHRITAPAYELVRKTKIPTAFGGIDIAPIIVLLALQFLDLFLVGLLIEISTKI"
     gene            27379..29052
                     /locus_tag="RPW04_000235"
     CDS             27379..29052
                     /locus_tag="RPW04_000235"
                     /inference="COORDINATES: protein motif:HMM:NF013618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HDX6294362.1"
                     /translation="MKFLLKFSIFTAFIAVFLDAGVISYEQIKQAPKGLAKDYYIYRY
                     INESKKATPNEIKTLRTEIYRYSGKLKKDIESIIGPLKERVVDCRGVNANNIIDANAT
                     CQKMVLSVKFLQTMSKDKRDELAFKFKDGSPELANFIIGFDAPNPVKYYMDTNDTVSY
                     FKFYNTSNNKEKFLNDNNITSSFIPHLSSNWQFKTLINDAVINKKFDNFRLSLLNISP
                     QFASSEIAFLLGINAIIFNKDDLALEFFKSAAKTSKFASQRDNANFWIYLITKDKSIL
                     KTISKSSDINMYSLYAREFSGGGKIKIVVPDPSTKTLLNYDYTDPFVWQKTLNKVAKM
                     SQSELIRYGVRFFTKSTLGEYSYIMEKAHNYKLHFYPTPFMEHIGTNDVKRQALILAL
                     ARQESRFVPSAVSTSYALGMMQFMPFLANHIGKELGISNFDQDDMFKPEIAYKFANYH
                     LDYLEKYLINPIFIAYAYNGGIGFTKRMLQRGDLFSQNSEYKRYEPFLSMELVPYAES
                     RTYAKKVLANYIIYLAILNSNTKISQFFENLMIPGVGEKFRLNLQTAQN"
     gene            complement(28949..29449)
                     /locus_tag="RPW04_000236"
     CDS             complement(28949..29449)
                     /locus_tag="RPW04_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009294586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294363.1"
                     /translation="MKNAILISIFAIFLASCSDKKAVIQDPLKNELLAYTQKFEDTND
                     KFLAVGTYLNPIHQDEFPDKKNEHFIITIYPKDSKINYSSFKVNDDNNGTKISILEDN
                     DPLLKLTTFQMPWGIYLKVSAPQKNSDTLNLSFERFVDSNGTSRPLQVSLNFRKIAKS
                     LYWNSK"
     gene            29626..29943
                     /locus_tag="RPW04_000237"
     CDS             29626..29943
                     /locus_tag="RPW04_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2325 domain-containing protein"
                     /protein_id="HDX6294364.1"
                     /translation="MSVLVIGADEITPIKAVLRDLGASSIEHWDARNENRVNRKPIPQ
                     NTECVIMLTSFLNHNTMKKIKGEAKKRNIPIVCAKRSVSCVFCEYCKVFGLDKEFGCQ
                     GSK"
     gene            29940..30638
                     /locus_tag="RPW04_000238"
     CDS             29940..30638
                     /locus_tag="RPW04_000238"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294365.1"
                     /translation="MISKFSGLDVFYEIYGSLYSSNRLETFLTLYNSSVDEGLKIPYK
                     YIKNSQSVGHIFHLRVNDLLNIKPFKFTKCVIFCLISNAIIRAFLDGKELPIFAREPK
                     MRVAKLIKTAFSNAKFDMQFMFSEYVFDKISKRHPYKVVDMKDGLILLKDGEKTILGV
                     IAFFKLVDSDYENNLLAEINFAHQKSRDIGTDLYMAFPRNVNFTRYIDIKQNGARLRL
                     VPYKICNKIYDKGY"
     gene            30638..31126
                     /gene="fldA"
                     /locus_tag="RPW04_000239"
     CDS             30638..31126
                     /gene="fldA"
                     /locus_tag="RPW04_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HDX6294366.1"
                     /translation="MTGIIYGSSMGNTEEAANLIAANLGIDEVLNIADTDAATINGFD
                     KLIIGSSTWGSGDLQDDWDSFDFDKLEVSGKTIALFGMGDSSSYSDTYCNAMGILYEK
                     LSQKGANIVGAISTDGYEFDESEAVKDGKFVGLALDADNDSDKTEDRIKAWVEIIKPN
                     FS"
     gene            31235..31735
                     /gene="luxS"
                     /locus_tag="RPW04_000240"
     CDS             31235..31735
                     /gene="luxS"
                     /locus_tag="RPW04_000240"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDX6294367.1"
                     /translation="MPLLDSFKVDHTIMNAPGVRLAKVMNTPKGDKITVFDLRFCKPN
                     IEILPQKGTHTLEHLFAGFMRDHLNNNDVEIIDISPMGCRTGFYMSLIGTPSWEMVAK
                     AWEESMKDILNVKSQDDIPELNKYQCGTCTLHSLDEAQDIARNILAKGVGYIDNEAIK
                     LDMSKI"
     gene            complement(31818..32516)
                     /gene="ung"
                     /locus_tag="RPW04_000241"
     CDS             complement(31818..32516)
                     /gene="ung"
                     /locus_tag="RPW04_000241"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDX6294368.1"
                     /translation="MTIDLAKVKIEDSWKEVLKDEFLSSYFLEIKFNLINALKNGKVY
                     PPSNLIFNAFNLTPFDKVKVVILGQDPYHNEGEAMGLSFSVPKGVRVPPSLANIYKEI
                     KDDLGIIEPNCGDLSYWAKQGVLLLNATLSVGARMANSHSNFGWQIFSDAVIKNISEK
                     KTGVVFMLWGNYARAKANLIEANKHLVLTAAHPSPLARGAFFGSRHFSKCNNYLIKNG
                     QTPIDWDLNNYTLN"
     gene            complement(32556..32909)
                     /gene="rplT"
                     /locus_tag="RPW04_000242"
     CDS             complement(32556..32909)
                     /gene="rplT"
                     /locus_tag="RPW04_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDX6294369.1"
                     /translation="MARVKTGVVRRRRHKKVLKLARGFYSARHKHFRKAKEQLERSLV
                     YAFRDRRAKKRDFRRLWIIRINAACRLNDISYSRFMNGLKKANIALDRKVLANLAMND
                     AAAFAAIVAEAKKAL"
     gene            complement(32996..33187)
                     /gene="rpmI"
                     /locus_tag="RPW04_000243"
     CDS             complement(32996..33187)
                     /gene="rpmI"
                     /locus_tag="RPW04_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDX6294370.1"
                     /translation="MPKMKSVRGAAKRFKVGKNKIKRGSAFRSHILTKKPSKRMRDLR
                     QSQYVDSTNVSAVKKMLCI"
     gene            33362..34369
                     /locus_tag="RPW04_000244"
     CDS             33362..34369
                     /locus_tag="RPW04_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HDX6294371.1"
                     /translation="MKKRVLFLGLLASAMLASEVNLYTARHYDADQKIYDAFEKKTGI
                     KVKATQAKASELIKKLEIEGASSSADLFITADVGNLYSAKQKGVLQKVNSEYLEKTIP
                     QNLRDIDSQWFAVTKRARVIVYSKDRFDPAKMGLKNYEDLGNSNLKGKLLIRSGTAGY
                     NTTLIASLIAHNGEEKTLELSKSIVSNFARAPKGGDRDQIKAIFAGEGDVALVNTYYI
                     GLMLNSPKANDVDAAKSIGIIFPDQDSYGTHVNISGVALTKASKNRENAIKFMEFLLS
                     PEAQEIITNINYEYPVNKDVKPSQTTANFGEFKADEISLSKVSENIKKAVFLVDQAGW
                     K"
     gene            34370..35926
                     /locus_tag="RPW04_000245"
     CDS             34370..35926
                     /locus_tag="RPW04_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002948163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDX6294372.1"
                     /translation="MKILKLGAIFVALVIVFPLFFIFIEMFFGDFSLLNHFSKYLLSG
                     YIKDTFLLLFGVLVSTITIACISAYLVVNYKFPFSRFFEFALVLPLAIPAYIFSFAYV
                     GLMDYNGEFMKVFGFRIDMMNIWGAIFVISLSLYPYIYMFAKTSFKTGSKTVFELAKI
                     YNINGFMTFFKISLPLARPAIFGGAMLVAMETLSDYGTAAYYGVNTFSAGIFKVWYDL
                     DDSYLASFLAGILMVIVFFIMFAEYLNKKSYSFNNNTSLSLKPANLSKIAKFFAFLWC
                     FTLFMIAFALPFYWLVYWSIFGDVKFDAGFIKMASNSLFIAILASVLIVAVGLFLTFS
                     SRFFVSKLIKTMVLRCSSLGYALPGASVGVCVMIVFGYIDRNFGTSLLSSSFVVLMFG
                     YLVRFMTASIYALDSGYSKISKFIDDASKVMKISLWNMFFKVHLPLLKHFILLAFTLA
                     FVDIVKELPLSLILRPFEFETLSIRAFFYATDERLYSAALPSLLIVLISLCAVVFVEV
                     YAHKKSKQSI"
     gene            complement(35986..37401)
                     /locus_tag="RPW04_000246"
     CDS             complement(35986..37401)
                     /locus_tag="RPW04_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDX6294373.1"
                     /translation="MRKTALILLIGAFVAGCSLKPDMIEIQQTYEYKFDVYSINEKWW
                     ESFGDEKLNSLISQALKNNSDLLIALNNIEQAKINLNLANVELFPNINLNGEATKNRS
                     SGETYMGQDNKKYNAFSLNTALSYEIDLWGRVRDSANASEAIFKATKYDYDSAMLSIA
                     STTANTYFMLISLKEQENILNETLNTYEETLIYRQKELNAGAIDELTYYQAQAAVHSA
                     KTQLIGIQTQIAQTNSALSVLVGKNLNDILYQSIDSPNTLPTMPEVPSGISSDVLLHR
                     ADIASSLERLKASNFLVGVARTAWLPQLSLTGIFGFSSDEFNRFFVNNANIWSVGGSI
                     MMPLLDFGRTKNRVELANLEQNASFLSYDKAVKTAFGEIRTALDTRKNSVLKEQSMQD
                     LVKSQTKVYDLSKARYDDGYSTHLEFLDSQRNLLSARLSLAQSKLDVATSVVDVYKSL
                     GGGFNYKEDNLNLGNPKTAQK"
     gene            complement(37394..40540)
                     /locus_tag="RPW04_000247"
     CDS             complement(37394..40540)
                     /locus_tag="RPW04_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HDX6294374.1"
                     /translation="MFSKFFINRPVFACVLSIIIVIAGYIGLKSSPIEEYPQLTPPQI
                     MVQANYSGADAQTIADTIAAPLENAINGVQDMIYMQSTSSSAGTMSLSVYFKIGTNPQ
                     TATVNVSNRVTPALSLLPEEVKRVGVTVRERSSSILNVLSFYDPSGKMSDTEISNYIN
                     INVADAIKRVPGVGDAVVIGNKDYSMRVWIKPDLLKKYSLTTTDVINSIKEQNSQYAT
                     GKIGEQPTQTSNPYVYAIKPEGRLKNVSEFENIIIKANNKGNIIKLKDVATVELGAQN
                     YTFAGRINGATMIPMFVFLQSGANALNTADAIVKRVDELKASFPGDLTYIVGYDTTEF
                     VKVSIDEVIKTFIEAMILVVIVMYMFLGNVRATIIPMLAVPVSILGAFGGLYAMGFSI
                     NLITLFALILAIGIVVDDAIIVIENVERILHGEPNLTVKEATIKAMSEIVAPVISIVL
                     VLSAVFIPVSFMEGFVGVIQRQFALTLVVSVCISGLVALTLTPALCAMILRKKENPPF
                     WFVRKFNEFFDFSTKIFTAGVAKILKHVIMSLICVGIIIFMMAELFKVVPGGLVPAED
                     KGSVLAITNLPPASTLSRTTEDTEFIRSIISQNPNVKNVTGLAGYDMLAGTLRENAGI
                     MFISMIPWNERPGEANSTAAFAAQYNKQMYMADRNSMTYFMTPPPIMGLSITGGFELF
                     AQNTEGKNYSQIEADMQKVVAKANAHPALNMVRTTLDTNFPQYDLTLDKEKIKMMGIN
                     ISDVFNTLSSTIGQYYVNDFNMLGKTFKVNIRSMSEYRDSPEDLRSLYVRSQDGKMVP
                     LDSVVSLKRSLGPDNVDRFNAFPAAKIMGEPKPGYTSGDAIKAIEQIIKEELPTGYDI
                     GWSGSAYQEVASTGKGAQAFVFGMIFVFLILAAQYERWLMPLAVVTAVPFSVFGSLLF
                     TWTRGLSNDVYFQIGLLLLIGLAAKNAILIVEFAMQEHLAGKSIKEAAINAARMRFRP
                     IVMTSLAFTLGVLPMVVATGAGAASRHALGTGVIGGMIAASTIAIFFVPLFFYILESF
                     NLWLDNKRGKITSGEEHA"
     gene            complement(40540..41661)
                     /locus_tag="RPW04_000248"
     CDS             complement(40540..41661)
                     /locus_tag="RPW04_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDX6294375.1"
                     /translation="MNKFFNFVILTSSLILAGCLGSDNKKSAAQQQIPPMPVTVMQAK
                     MGDIPIVLSFNGQTVSDMDVVLKAKVAGTIEKQFFKAGASVKEGDKLYQIDEAKYRAA
                     YDSAFANLQVSQANLKNAESDFDRAKKLQEKSAISQKEYDAALAAYESAKASVLASKA
                     NVQTAKIDLDYSTVTAPFSGVLGDTLKDVGSYVSSSDADLVRLTKLNPIFVKFGISDV
                     DKLNIAQKTRTKEWEQLNSLVTLSMQNGDYNGTLTFIDNVIDEGSGTVNAKAMFENNS
                     TQIRPGIFASVNVYGFYQKNGFKIPQVAILQDLASPFVYTLKDGKVAKNPIKIVSQDS
                     TSAVISSGINDGDLIIMDNFKKINIGQPVQAINDAKGSK"
BASE COUNT        13854 a         6479 c         7475 g        13940 t
ORIGIN      
        1 aataacaaaa acgtataatc aaacagtatc aattcattaa aaggttagcg atgaagataa
       61 aaattaactc aaatatcata gatatagatg aaaaccttag tctaaaaaag tggttagaga
      121 caaatggcta taatttagat agaatcgcta tagaatgtga tggagagatc atttcaaaaa
      181 gtgtttggaa tgagtttata ttaagagaaa atttaagctt ggagatagtt gaatttgtag
      241 gcggaggata atccaaacat acattaatgc catactttat cattttatat attcttatta
      301 tgcctttttt tgcactcaaa tttatatttt aaatttaaaa tctttctttt aagaaaaaat
      361 tggttttact ctgttataat gaacgttatg aaaacgataa aaattaattc aattacacgt
      421 caaactaacg caaataattt aaatgagtta cggaacgaat taggtattag tagcgatatg
      481 cttactatat ataaaggttt tgctacaaat gacaatatag ctttaaatga taatgatagc
      541 gttgtattta taaaaaaagg agaaatgcct cctaaagagt ttttagaaga gatgatgagt
      601 tcaagaaact ctcctgagat caacatagct ttaaaaagcg caaaagtagg cgtagcagga
      661 cttggaggac ttggaagtaa cgtagcaata gctttagcta gagtcggagt gagctactta
      721 aaattagttg attttgatac tgttgatcct tcaaatttaa atcgtcagca gtattttata
      781 aaagatatcg gacgttttaa aactgaggct ttaagtgaaa ctttaagtct tataaatcca
      841 tttgtaaaag ttgagtttga aaccataaga cttgaagaga caaatgtgaa tgaagttttt
      901 caaaagtgtg acgtagtagc tgaatgtttt gataatccaa agtcaaaagc tatgataata
      961 aattctttaa ctaaaaagat gatagtagca gctagcggaa tggccggata cggtagaaat
     1021 gaagatataa aaactataaa aatggcaaat aatctctatg tttgcggtga tttagtaagt
     1081 gcggctagta taggaaatgg acttatggcg ccgcgagtcg gaatatgcgc tatgcatcaa
     1141 gcaaataaaa tattagaaat attaatagat aaggtaaaac aaaatggatg agcttgtttt
     1201 aggtggagtt agttttagct caagatttat tatgggctct ggtaaatttg atccagagtt
     1261 gataagtgct tgtgtagaag acgctaaagc gcaaatagta actcttgctt taagaagagt
     1321 aaataaagac aaagatagta taaccgaatt tataccaaaa aatgtaactc tcttaccaaa
     1381 tacaagtggt gccagaaatg ccgatgaagc gctgcgcata gcaagactta gtcgtgagtt
     1441 gggctgcgga aattttataa aagtagaagt cattcgagat agtaaatatc tatttcccga
     1501 taattacgaa actataaaag ctaccgaaaa acttgcaaat gaaggcttta tagtgttgcc
     1561 atatatgtat ccagacttaa cttgcgctag agatttagta aatgctggag caagtgccgt
     1621 tatgccttta gccgctccga tcggttctaa taaaggactt ataaaccgag atattattca
     1681 aattttgatt gacgagatag atattcctat tatagttgat gcgggtatag gccgtcctag
     1741 cgaggcatgc gctgctatgg agatgggttg tgctgctatt atggtaaata ccgctattgc
     1801 tacttcaaaa gatataagag ctatggcaaa agcgttttgc gaagcgataa ttgccggaag
     1861 aactgcttat aaagccggac ttggtagggt aaaaaatata gcaagtgcta gttcgccttt
     1921 aactggattt ttaggcgaaa attaaaagat aaaatgagaa tataaaatga gagatagaac
     1981 agatcatatg cgttatcttc ctcatcaaga ggttataagc catgatgtga tgaataagat
     2041 atttaaagag tgggaagaga ctaaatttga aaactttact caagatgatg ttataagcgc
     2101 tattaatgca aataataaaa gtatatatga ctttaaggca cttttaagtc ctgaagcagc
     2161 tcccttttta gaagatatgg caaaagaagc gatgagtatc aaagagaggc attttggaaa
     2221 aaatatctat ctttttacac ctttgtatat agcaaatcat tgcgataata actgtgttta
     2281 ttgcggattt aatgtacaca acaagataaa acgtgcgcag cttgaagaag atggcattat
     2341 acgtgagtta gaaaacatcg caaaaagtgg attagacgaa attcttatac ttacaggaga
     2401 gagtcaaagc aaaactccgc ttagttatat aagtagagct tgtgagcttg caaaacgtta
     2461 ttttaaggta gtaggagtag aaatttatcc tctaaattcg gatgaatacg catttttaca
     2521 caaatgcggc gtggattttg taaccgtatt tcaagagact tataatccgc taaaatatga
     2581 aaaaatccat ctggagggaa ataaacgcat ttttccatat cgtctaaacg ctcaagaaag
     2641 agcacttatg ggcggtatga gaggggttgc ttttgccgct cttttaggta tagatgactg
     2701 gagaaaagac gctttatcta cagggcttca tgcttatctt ttgcaagcaa agtatcctca
     2761 tgctgagatt tctatctcag ttcctagact cagacctatt ataaacaata aaaagattaa
     2821 tccaaaagac gtcggtgaga gagagctttt gcaagttatc gttgcttatc gtctattttt
     2881 accgtttgca aatatcactc ttagcactag agaaagtgcg cattttaggg ataacgcaat
     2941 caaacttgga gtaacaaaag tttctgccgg agttagtgtt ggtatcggtg agcacggtgg
     3001 taaaaaagat gagcaaaaag gcgattctca gtttgagatc agcgacggta gagatgtaga
     3061 agagatgaaa agatctataa gaaaagccgg tttaacgccg gttatgagtg attatattta
     3121 cgtataaatt aaaattatct cttgttgtgc ttatatgaca aaagatttta tgaaaattag
     3181 ataatttctt tggcaaatat cggcactgca agaaagtaaa atccatctat ttcaaaatct
     3241 tttgcaaatt taaaaaactc ttcaaaatct tcttttttaa atttaaaagt ataaatagac
     3301 ccttgctcta caaattcctt tttttcgtct tttactccgt gtttttcaaa gtaatgatta
     3361 aaacgtgcca acaaggcaaa cggtataaaa aacagacatt catcttgcac ttcgaatttg
     3421 atcaaatttg cgttatttat cactaaattt gcactgctgg agtatgctcg tacaagtccg
     3481 ccgactccta gttttactcc tccgaaatac cgtacaacaa aaactcccgt gtttataagg
     3541 tttgctcctc ttagcacatc aagacaaggt ggtccggagc tgctttttgg ctcaccgtca
     3601 tcgctggaat tttctactat ttgaaaatgt ttgttgtaat ttctgtacgc ccatactatg
     3661 tgagccgctt ttggatgatc ttcttttagc tttttgtgaa gagtttcaaa ttcatttata
     3721 gggcataaat agcttataaa atttgacttt tttatctctt ttgagccggt ataaatttga
     3781 tttactataa acatggatat attttaacag ataaatttaa atttaaatga atttaagata
     3841 aaattactaa aaaattaagg attatccata tgatacaaac ttgccttttt cctgctgccg
     3901 gttatggtac gagatttctt ccagctacaa aaagtttgcc aaaagagatg cttcctatcc
     3961 ttactaagcc tcttattcac tacggagtag atgaagctag agaagccggt atgaaaaata
     4021 tggcatttgt caccggtcga ggaaaaagag ctttggagga ttattttgat ataagttatg
     4081 agcttgagca ccaaatagcc gggactaaaa aagagtatct tcttaccggg ataagagatc
     4141 ttatgaattc ttgtagcttt tcatttactc gtcaaagtag tatgaaaggt ctaggagacg
     4201 cgatatatac tggtagaact ttagtaggag atgaagcttt tggtgttata cttgccgatg
     4261 atttgtgtat aaacgaagat ggtgaaaatg ttctagctca gatggcgaaa atttatgaaa
     4321 aataccgctg tagcatagta gcggttatgg aagttcctaa agagagtatc agtagttatg
     4381 gtgttgtaaa tggcaagttt atagaagatg atcttttaat ggtaaatgat atgatagaaa
     4441 aaccaagtcc agatgaagcc cctacaaatc ttgctatcat aggcagatat atacttacgc
     4501 ccgatatatt tgagatatta gaatctacaa aaccgggcaa aaacggtgaa attcagataa
     4561 cagacgcgct tttaaaacag gctcaaaacg gtatggtttt agcttataaa tttaaaggaa
     4621 gaagatttga ttgtggttct gttagcggat ttgtcgaagc tacgaatttc ttctatgaga
     4681 gtgacaatgg taataaatga gctgaagttt ccatttaagg atatgcaaaa tatcagctca
     4741 tacgcaagac gtatgaatga agagctaaat aacgatgaga tcggctatta tcatctgcct
     4801 agttttggtg aggagataag cgaaaaactt gctttgtatc gtaaaaatgt aaatttcaac
     4861 acggttgtgt taataggagt tgggggcagc tcgcttggcg tgaaagcact ttatgaaatg
     4921 ctaaatttaa aaactaagct tatattttta gataatcttg atccgtttta tatagaaaat
     4981 agattaaaag atatcgagtt tgatagcagt atttttatct tatctagcaa atcaggcacg
     5041 actatagagc caattagtat ttataagtat attttagatc tctattcgcc aaaaaattac
     5101 aaaaatttta tcataattac cgatccccaa agccctcttg aagagtacgc taatttacat
     5161 aatataactg tttttaatat tccaaaaaat gttggaggac gctttagcgt attatctgct
     5221 atagggcttg tgccgcttgg attatgtgga gtagatacgt catccttgtt agacggtgct
     5281 gtttcttgta aaaagcagtt tttagaagat gatgatagtt taattttaca aaaagcatat
     5341 cactatgcaa cgcataaaag cgctaagata aatgtagttt ttagctatag tgaaagattt
     5401 catagtttta atgattggta tgtacagtta tgggctgaga gtcttggtaa aaagcgcggt
     5461 tataagcgaa tgggacttac tccggtcgga cttataggaa gcaaagatca acactcgttt
     5521 ttgcagctta taatggaagg aataaaagat aaaacagtta cgtttttgat tttaaaagat
     5581 catttaagca gcatttgtat tccaaattta aaacttgagt atttagatga gtgcgacttt
     5641 gtaaatgaag tgtccatgag tacgctttta aatgctcaag caaaatctac cattcaagct
     5701 ttacttagtg aaaatatcag catagatacg attttagtag atagattaga tgagtggcac
     5761 tctggttggc tcatttatta ttacgagctc cttacaagcg ctactggact tatgctcgga
     5821 gtaaatactt atgatcagcc tggcgttgaa gcctctaaaa gaatactaaa aaatttacta
     5881 tcaaataact aattttgtct gtttgtattt tgataatgat tattcaacaa atagggttca
     5941 aaataggcaa tatttatttt ttatttatca tttaaactat ataatttact taataagaga
     6001 ttctgtatct aaataataaa aattcttatc taagatttat ttctttttaa gaataatttg
     6061 atataattct cgaaattaaa aaataaagga tataaaatga caaatgtagt taaacaactt
     6121 aaccaaattc aagcagacgc tcatgcgttt ttcattgcgt ttcatgacta tcattggaat
     6181 gtaaaaggtc ttcaattttt ctcaattcac gaatatactg aaaaagcata tgaagagatg
     6241 gcagagctat ttgatgatgt agctgaaaga gctatacaaa taggcgggaa agctatttta
     6301 aaatctgaag agcttgtaaa acttgctcat gctccggtaa tgcaaaaaga tagctatact
     6361 gctatagaag ttatagaaca attaagagta gcttataaac atcttgttga agagttcaaa
     6421 aagcttgaag cggcagctga aaaagccggt gatacaacaa ctgcaaatat cgctcaagat
     6481 cattacggtt catatgagaa gaaaatttgg atgcttaatt ctactttagc gtaatttttg
     6541 atactaaaac ctgatacttt gatatgaaag gcggataaat ccgccttttt ttatttattt
     6601 tgctgcagct tctacttcta tatttatctt aatttcatct cctaaagtta atgtgcttgt
     6661 atctggagca aagctaaaat cgcttctttt tatcttgccc tcaaggctaa atccaacgat
     6721 ttgaattcct ttttgatttt tgctttgtcc gccaaattca tagtttagag ttactggttt
     6781 tgttacattt tttatagtta aatttcctat aattttacct tcgttatcgc catctttttt
     6841 aaattcggtc ataacaaatt tcatttcagg aaatttagca atatcgaaaa aatcagcttg
     6901 ttttagatgg ttatctcttg cggtgttgct tgtattgata gaatcaacgt ttattatagc
     6961 atctatcttt tttggtatac cgttttctat atcaacaatt ccgctaaatt tgtcaaacga
     7021 tcctgttacg ttgctcacgc ttaggtgttt gattttgaaa tttgtacttg aatgagtaac
     7081 atctatatcg tagtttgctg cgtttgcaaa acctactaaa agcattgcac acaacgcaga
     7141 tccaaatatt ctctttgtca tttttgtcct tttttataaa atataaataa ttgtacaatg
     7201 taaaatacaa ttaatattaa atttcaatac aataaatata ctatttaata attttttaaa
     7261 tttcattaac tacgttaatt ttttcaattt aaaaatatta ataaatttta tgcaaagtag
     7321 atattatttt ttgataaagt tataattttt taaatttaaa acgagttgat ttgtaaattt
     7381 ttctatattt aaatcccttt tcgtaccatc tctttgtttt gtaccccaca tcgactcagg
     7441 aaaaaagcta tcgtctttga atctggcttg aacgtggata tgtacttttg gaacgtaatt
     7501 agcaaaactt gcccaattta ttttatcggc gcagtagaaa tcaagcatag ttttttcggt
     7561 aattagagcc gcttcaaata gccattttct agtcacatca tctacatcgc taatctcttt
     7621 gaattctttt tttgtaaata cctttaccca aggaatttcg cttttttcaa gttcaatgca
     7681 gataagttca ttttcatata tcatagtttt actctcgctt ttataatttg ttcttttaat
     7741 ctaagacttg ctttttcaaa gcttgtttca tcaaagtttt ctagattaaa aaaatgtaga
     7801 tctttaaact gcttctttaa ataattctca ctttgctcat ctttagatcc actaaaaata
     7861 acccccaaaa tctctaaatt tttcattttt aaggcttcta tgcttaaaat agtgtgattt
     7921 atgctgccaa gatagttttt agaaactaaa aacgtaggaa gatttgctgt tttgatatag
     7981 tcgatcatgt aaaatttgtc atcaagcgga cagtaaagtc ctcctgctaa ctcgactaaa
     8041 atatcgtctg gttttggaat ttttatttta agtccgtcaa aatgtatgtt ctcatttatc
     8101 attcctacat gcggactagc agcagtttgc agcattacgc caggagagtg tgatttgaga
     8161 tttggcacaa ttttttttac aaaactttca tcggttatat ttccggcttg tattaactta
     8221 aaatactcgt atgaaaacgc ataacacaaa gccgcgctta cgcagctttt tccggcatcc
     8281 gtatgaatac cgctgataca gatatttctc attttttacc ttttttgcag attatatttg
     8341 taaatttata agttagtttg aaatcattat taaaatgcgt ttcaagactt tttaaatttg
     8401 atttggttag tttaaaactc ccgtttaagt tatttacccc tgtttgctta aggtgagtta
     8461 aaagctcttt taaactaccg aatttagcta taaattcccc atttttatac tctaaaatat
     8521 caaatttggt tccaaaaata tctatgattt gatccgtatt tttataattt aaactatctt
     8581 tagtaaagct tgaaagttca tttaaagttc catttataaa catagaaaat gcaagtattc
     8641 cgttattttc taggcttaga aatatcttat cacatagttt ttcaatctca tcaatccatt
     8701 gaaatactga gctcgatatg ataatatcaa tgttttttgg catttgctta gtagttatat
     8761 ctcctatatc tatataaaaa ttattcataa attcactttt atagatatca ttaagaatta
     8821 aatgttcata attaaaattt tgtataaaaa gctttgttaa aactccgctt ccagcaccga
     8881 tttcataaac attcttaaag ttttgcgtat atttttttaa caaatttatg agattgagag
     8941 cggcaaattt ttgagccact gcaaattctt cgtagttgat agctttttca aatttcaatt
     9001 atatctccaa agcttttaaa gttaaaaaat gcaaaatgtg gagcatttat atatattttt
     9061 tgacatgtaa accattcaga tgcttttggc aaaaagatca aatctttttt gcttataatc
     9121 gctttatccc aacaaatgtt gttatcacac ggttttatag cgtttttata gagattaagt
     9181 agttcgaatt ttgcgtttgt attgaattta aaatttgaga ttttttctgg tggaattcct
     9241 aaaaaacaga actttttgaa gttttcaaaa tcataattcg ttattgtttt ataaaaatta
     9301 cctgcgttta taccgtattt ttcatctata ccaaacggag ttccgtttat ggctattgat
     9361 ttttttaaag gtatattttt taataccaaa tttgcagccc aaacccccat tgaccaagac
     9421 actagataaa tatctttatc ttttaaaaaa ctatgatcaa actcaagttc gctatagtcg
     9481 taaataaccg ctaaagcgaa atctcctact tctaaatgtt ctacacaact aggcgtaaat
     9541 gaatagccta aaaataacaa aattagtttt ttaccgtctt ttttaatgat atctattttc
     9601 atctaaaatc ttttttaaat ttgataattc gcctatttct atatctcctc ttaagcttat
     9661 cctaagtctt gaattatgtt taggcactgt tgggggacgg attgccggta cgaaatatcc
     9721 agagtcaaaa attttatttg cgagttctag agttttatcg ttttcatagg tcataaatgg
     9781 acatatgtga gttgtgccaa gatctaaaaa tttgatattt ttttctaaat ttgtcctttc
     9841 gcggctaaaa tctttgttta gtataaagtt cgtccatgct atatttatac taggaatggc
     9901 agtagagtaa atcaggcttc tagccgagtt tataaaaata tctttatact ctttatcgct
     9961 aagtataaca gctccttctc ccccgactgc tttgctaaga gttacaagta aaaaatccac
    10021 atcggtatct gtttggctgc tttttgctag acctaattcg tctttgataa aaaatgaatg
    10081 agcttcatcg atataaagta gtacattttt ataccgtttt tttaaattta taagattttt
    10141 gatatctagc aaatccccat ccatgctgaa aatagtctct gttaatatta taatattttc
    10201 aaatttatct tgattttgtt cgagtaaatt ttgaagtgct aaaaggtcgt tgtgaggata
    10261 tcttttgaaa tttgctccgg ctaactttag agcgtctatc atgctagcgt gagctaattt
    10321 atcggctaaa aatagagtat ttggactatt tatggctgat atacagctta aatttgcaca
    10381 gtagccggag ttaaaaattg ttgctttttt accgtcaaat ttcgattcaa accagctttc
    10441 aagctcatta aattcgctac ttgaagtata tacaagccta ctcgcgccag agccaaaaaa
    10501 ccactcttta tgtttggcga ttgttaagaa ttcgtctctt aaacttatat tcgtagctat
    10561 gcctaagtaa tcgttgctac cgagatttaa aagagttttg cctctatagt ttataaattt
    10621 ggaatggctt tgagatattt ttaactctct aaagttgctt tcttgtttgg ctttttttat
    10681 atcaaacatt ttgtacctaa ttattatact gaattaatta tcgtgaataa atttatgtcg
    10741 taagattata tcaaatagat cttaaattta tgactatttt atgcggcttt cgctaatatt
    10801 atgcaaaaca aaaggtgata tgtgaagagc tgcatagtct tgtatgatgg aataagtatg
    10861 cttagctttg ctaaaattta tgatttcttt atagcaaata gcgttgattt cgaagttgct
    10921 tctttaagag aagagataac ttgcgagggc tcatttaagc tcaattcacc aaattactct
    10981 cagtcgcttt atggatatga tatagtcgta tttccagatg gtaccggagc tttaaattta
    11041 agctatgacg atatattttt aagctggata aaaagtgcaa acgatgcaaa gataaagatc
    11101 gctataaaca gggcttcttt gatcattaaa gaagccgggc tttttcatcg tcaactattt
    11161 atgaatgatg ataaggtgac agcgatttgc gagttttgcg ttgataaaga tgtgattagt
    11221 atggctgata cgtcagcttc gtggcaggag cttaaagagt ggataaagag cagagtataa
    11281 tagaccgttt ttctcataaa ctaaacggcg atgatggagc agtagtcggc aaaatggtgc
    11341 ttagcaaaga tatgtttgtt gaaaattcgc attttaaacg taaatggtta agcgcttatg
    11401 agatcggcac aaaagcaatg ctggtaaatt taagtgacgc ggtagctatg aacgcaactc
    11461 ctaaatatgc gcttttaggg cttggtattc caaaaaacat atcaaataac tatatttatg
    11521 agatctgtag aggtataaaa agcgcagcga aagattttaa tgttgagata gtcggcggag
    11581 acactataaa aagcagcgaa ataataataa gcctaacgat aatatcatac ctaaactcca
    11641 aaaaacctat ttttagaaat acttctaggc tgggggattt agtatgctat acagggaagc
    11701 taggagactc cttaaaaggc ttgagaattc tccaaaacgg tggaaatcta ccgaaaaatt
    11761 ctcgttttaa aagacctgtt ttaagagtaa attttatgaa aaaagcagca ccttttatac
    11821 acagtgctat ggatatcagc gacgggttgg ctagcgattt accaaaaata tgctctaaat
    11881 ttggaatcaa atttaaaaat atacttagta aagatgagtt cagaagcggt gaagagtatg
    11941 aacttctatt tacggtgagt aaaaaacatc taaaacgtat gcaaaatgaa gcaaaaaaat
    12001 gtagacttaa actaaatata ttaggaaaac tgataaaagg aaaatataaa tcatatggaa
    12061 aatacagcca tttttaaacc gcttttaggc actacgcatt cgcctataaa cgcgcatttt
    12121 agtaaaaacg caagtgattt tgtagttaga gaaaaccctc tttatagttt tagtggaagc
    12181 ggtgagcatc tcgttgttga aattcaaaaa aaaggtatga cgacttccga agcccttact
    12241 gttttaagca ggcaaagcgg agcaaaaatg cgtgattttg gttatgccgg gcttaaagat
    12301 aaagagggga tgacaacaca atttattagt atgccggcta aatttgaaaa tgaaatttca
    12361 aaattcagct acgaaaattt aaaaatccta agtataacaa aacataataa taaaataaga
    12421 atcggtcact taaaatcaaa cagctttttt attcgtctca aaaaagtctt aggaagtgaa
    12481 gctcttaaac ttaaagaggc tttaaaaact atcgataaaa acggctatcc gaattatttc
    12541 ggttatcaga ggttcggtag atttggagat aatgcaaata gtggatttga aattttaaat
    12601 agtgctttaa acggtgataa atcgatgttt aaaaaggcaa atccaaagtt aagagatttt
    12661 ttaatttcag cttatcagag cgatcttttt aacaaatggc taagcaagag agtggaaatt
    12721 agccgtttta gtgaagattt tagcgccagg gagcttgaag atatatataa atttgataaa
    12781 actactataa aaaatttaaa atcccaaaaa caatttttta agctttttca aggcgaagtt
    12841 ttaggtcatt atccttttgg aaaggtgttt ttatgcgaag atttagaagc cgaggttgct
    12901 aaatttggag caagagacag aacaagctgc ggattgataa tcggttctaa agcgtatgaa
    12961 agtacaggag ttgcaaagag tttagaagat gaaatattta gagacgctta taaatttagt
    13021 tcttttgtaa gcggttcaag acgatttgct tggatgtgga ttgataattt agaatataaa
    13081 tataatgaag aatccgcaca gtttagcata agttttgcgc tacaaaaagg ttcatatgcg
    13141 actgttgttt tgcgcgaaat tttaggtaga gatatttttg aagagtaaaa agtgggagtt
    13201 tttctcccac aagtattcac atactatcga ttttaaacat ataatatcgg tataaattta
    13261 aaaaacttta ttgatctttt gaatttatat ctattttaat atattttagt taaaataaca
    13321 gccggtgcga tgggtagttg caagatatta tcttgaggaa agtccgagct gcaataagac
    13381 agagttccac ctaacgggtg gctagggaaa cctaagggaa agtgcaacag aaaggaaact
    13441 gccgctaaag aaatttaacg gtgatggtga aacggcgggg taagagccca ccagtataag
    13501 tagagatact tatagctatg taaacccaac ttgcagcaag aagggacggt ttggagtctt
    13561 atgctcaacc cttcgcttga gtttgataca atatcaaaac tagataaata gctaccataa
    13621 cagaactcgg cttatcatcg cacctacaaa gtagctttta gtttagaagc tatattttct
    13681 agctttttta actttttgaa actctacgtc taactctttt tgttttcgtt tatatatcgc
    13741 tgctgcattt tccaataaag ctgctgcgca ttgcatctct tctatatcca ttttatttgg
    13801 atagttgttt atcaaatact ctattttatt tagatcttca tttaccaaag cactcttaaa
    13861 atcatctagc cacttcatct gactcttctt tcgtaacgtc tctccatgca tcaagaagct
    13921 cccttgttac gtgtattact tcatctagcg gagctttatc gtttgtgcta tttgctagag
    13981 atatgagctg aatttgcctt gcgtaaagtc catttaagta ttgcgatatc gctccttgat
    14041 tcatatctaa agagtttata agttcaaaaa atatcgcatt tgttttattt agaaattgaa
    14101 cttttgtttc tatatctcca tcgtctatcg ctttttttgc acggtagata aatctcaaaa
    14161 ctccttcata aagcatagtg ataagctttt gtggagattc tataccgata ttattttggt
    14221 tataagctgc gtaagctaca tttgattgca taccatcatc cttaagattt agagtttagt
    14281 tgtgcattta tcatggtttt tagcgtagaa aactgctgtt cgatctttgc tatcatgcta
    14341 tcatattgca cccatttttc agccatagtc tcatactttt tggtaatact ttcctcattg
    14401 tttgtttttt cttttgttag ctgtttgttg ttgctaacta ggctctcttc gtacgtaact
    14461 agcgatccct tagttcctat aaatgaatct aaagtatcct ttaactgttt gaaaaatcct
    14521 ccggtaactt ctgagcttcc tttaagttca gtttctttta aacctagttt ttctaaaaaa
    14581 gtagagtcgc cttttatttc taaattttct ccaccgctac cttttattac tagttttccg
    14641 tctttatcta tagttacagc gatgttgtct atacctgcac tagtgatagc ttttagtata
    14701 tcttttgcgt tttgattgct attgtttgca gagtcggttt tgatatctat atttttaccg
    14761 tttatagtta aacttccttg aagctctcct gcttctacgg cttttgttcc tgttgtagat
    14821 acgtttgtat actctgtttt tgagctaaaa aagtttttaa aattatcaaa attgttcgat
    14881 aaagcatctt taagtttgct agcttctagt ttcaaaagac catcactgct tagagataat
    14941 ccaaagtctt gaattgattt tccgtctttt gagactccgt ttattatctg gttaattttt
    15001 gattttatct gcgttatttc gcttacgcct tgaaatgttc cgctagctcc tgtctctgaa
    15061 ttataagaag ttgctactga taaattattc ataagattat tgtaactgtt aactaagcct
    15121 tctacgtctt gaactatacc ttctgtattt tgtttaatgt cgaaattcga gctttctcct
    15181 tctttatcca ctttatttag ctttatagtg actccggtta tgagatcgct tatagagttt
    15241 gtatctcttg ttatctctat tccgttatat tcaaatatag cgttttgagc agtttgcagt
    15301 cttgaagcta aatttgaagt atcgatagtc ttatctgtta atgctgcatc ttttatctca
    15361 tcttctgtca tcatagttag cttttcgcca ggagaagtcg tacttggatc tttaaacata
    15421 aatcctaaag atttcattaa attttttgag ttgtctatac ttcctgcgct atcttgtaca
    15481 tagctaaaac ttatttcgtt atcttttccg ctatcttttg actggataac taaactatat
    15541 ggattttctc ctccgacatt taaaactttt gcttgaattt tgccgtctgt tgcttcattt
    15601 attttgtttg ctatatcttc aagcgtagtt gaagcattga tctctatctc atatgagtct
    15661 gatcctatgc ttaacttaaa acttgtttca gccgaacccg gacttaaaac agattcgttt
    15721 tttagctcaa attttttaga ctgatataca tcttgactag ctagttgaga taccttaatt
    15781 ttcattgttt gttcattaac tccggtactt gcatctacag tagcgcttcc acttcctgag
    15841 ctagataccg agcgttttaa gtagctagta tcatcagtaa gtgatgatac gttgctttta
    15901 aaattgctta atagtgtttt tatggctgtt aagtcttttt gttgagtcaa atttgtttga
    15961 attttagtat ctatcgttga tactaaattt tttgtatcaa ctgattttag tttatcaaga
    16021 atatcccacg aaagaacatt actacttccc aatccaagtt gggacttttc agtattaata
    16081 gccatttttt attccttttt atcaaagatc acaccgacaa tctctttaaa atgctctgtt
    16141 aatttcataa tctcttcagt cggtattttt ctgataactt taccgctatc agcttctgtt
    16201 acgctcacat acatagagct aattttatca ttaaaaccaa atcttatgtt tgtgtttaga
    16261 gtctccatgt tgtcatttag cttatttact atgtcgctta tacgctttga gtcttgttca
    16321 ttattgcctt tattttggtt agagcgttct tgcgctacgt tttgctgtat ttttgcttgc
    16381 tcaacttctc ttgtttggtt gctattttgc ttagtattta aagcaacgga attatctatt
    16441 tgctgcgagg ctaccttaaa aatttccatc tttaaatcct tgaaatataa aatctaactt
    16501 ttattatatc ggtaattact gcataaagct ttatagttat agttgaaata ttatattaaa
    16561 tatgctagaa tgatgcataa ggagattcta tgaaaatatc gatagagtgc gactgcgtac
    16621 ttcttgcaca gagtctaaga ctatttttgg acggttacta cgcgcctaaa aaagagtgcg
    16681 attttatcat atcagataaa aaaacggttt cggataaacc tgttttcata ataagcgaaa
    16741 aatcaccata tcttagtgtg ccatttacaa aagatacgct attaaatacg ctagaagagt
    16801 tttattccgc tatgcaaata agaaatcaaa actatgtaaa aaagagccct tcaagcttag
    16861 aagagagagt ttcaaattta gtcgataatt ttaagcgtga tttaataaat attataaaag
    16921 atgaatatga aaagtagtct gacgacgact attagtagtg gcagattcaa agggaaaaag
    16981 ctatttttac cgagtttaaa tacaacaaga agtacaaaat ctatagtaaa agagtcattt
    17041 tttagcgcag cgagacaaga tatagtcggt aaagttttta tagaagtatt tggaggaagt
    17101 gcacttatgg ctgccgaagc gcttagcaac tatgcggcta aagcatatgc tgtcgagtta
    17161 gatagggatt cgtataaatt tacaaagaaa aatatcgata acttaaacga ccaaaatata
    17221 cttgcgatca atgctgatac gtttaaaata actcctcaaa tagtaaatga aaatgatgat
    17281 atagtattat acatagaccc tccgtttgat atcagagatg gatttggcgg aatttatgag
    17341 agagtttggg atatgatctc tgcacttgat aaatcaaaga tatttttaat agttttagag
    17401 catatttcaa cttataattc tcctgatagt tgtgccggat tttctaaatt taaaagccgt
    17461 aaatttggaa aaacaacgct tagctactat aagcagcatt aaatttaaat taaatttgga
    17521 ataattattg ctttaatcct tgcaaaataa agtaagggtc catatgaaaa tatttataaa
    17581 aatcatctcg ttcgcgctac ttcttagcac tataaacgct gctcaaatca aagatcttgc
    17641 aagtatagta ggcgtaagag acaaccagct tataggatat ggtttggtag ttggacttaa
    17701 tggaaccgga gacggaagta gtagcgagtt taccattcag tctttgtcaa atatgctaca
    17761 aacagtaaat gtcaaaataa atccaaatga tataaaatca aaaaacactg ccgctgttat
    17821 ggttactgcg aaacttcctc cttttgcaag gcaaggagat aagttagatg ttactataag
    17881 ctctatagga gatgctaaaa atctcgttgg aggaacgctt cttttaacag ctttaaaagg
    17941 cgttgacggt gatatatacg ctcttgcaca aggagcactt actttgggtg gcggtactag
    18001 taaaggcgga aatcatccta ctgtaggcac aattcttgca ggaggtcttg ttgaaaaaga
    18061 ggtaaatttc gatatctata cacagcaatc cgcaaattta agtcttaaaa actctagttt
    18121 ccaaacagca gtcggaatgc aaaatgccat taacacaaaa ttcggagttc aagctgctat
    18181 ggctatagat ccaagaacgg taaaacttac caaaccggca aatacaaata tggtagagtt
    18241 tttagctaaa gttctggaag tggatatgga ttataaagcc gatgaaaaag ttgttattga
    18301 tgaaagaact ggaactgtag taagcggtgt aaatatcact atagatccag ttgtgatatc
    18361 gcatggcgcc atcactataa aaattgaacc aaatgcttat aatccagcag cagcaaatgc
    18421 caatgatgtg gacataggcg gagcagcgat agacactact acgaatacgt taaaaattga
    18481 tgcagcaaaa acaacagtag ctaatgtaac aagagcttta aataaactag gagctactcc
    18541 aaaagatatt atagcgataa ttgaaaattt aaaaagagca ggcgcgatac acgccggagt
    18601 ggagataata tagatgcaag tagataatag tttagctttg gattcttaca actctcttag
    18661 tacatcaagc ataaattcaa atttaaaaga ttcaaaaaat gatgaacttt taagagagca
    18721 gacggatgca tttgaagcat ttttgttaaa agaggtttta gatatatcta ttaaaaatga
    18781 aaatagtctt tttcctcaag atgctggaga taagatatat tcgtctatgt ataatgatac
    18841 gatgagtaaa gctttaagcg gaggattggg atttagtgag atgttattta attttttgaa
    18901 agaaagaaac taaataaaaa gcttatatgt ccgatttagt cattaatata tggctaaaaa
    18961 ggatcgaaca tgataagttc tgtaggtgta ggcgctgctt actcaggttt gtcagcacct
    19021 aaaaatgaaa caaaaaaaag tgaacaaaca acacaaactc aaagtagtaa taacgatagc
    19081 aaagtagcaa ctatagctaa agagataaat gacggtactt ataaagtaga tatcgataaa
    19141 ttagcaaaaa agatagctga ctcacttatg taaatctctt actcctttga gaaaaaaagg
    19201 gagtaagagc tatgttagaa aaatatttag atgatgctgt tttacatctt gaagagctga
    19261 taaaaataac caaagccgat atagaaaata taaaaaatgc agaccattct tttgtcgcag
    19321 aacacacaag attaaaatcc gaacttataa aaaaatttga aaatacaaaa acattattag
    19381 ataatgaact agtaaaacta gctaaagaaa ataatggaac agatcttgct gatatacttt
    19441 gcgatgatat aaaagagaaa ctatcaaaat tgagagaatc tcttgtatct ttacaaaaag
    19501 tcaataaaga gtacgcaaaa tctgttattg tagtaaagga attttacgac tctttattaa
    19561 agtcaatgtt tggcagcgac tctggatcag gaacatatgg ctcagaatct ctttcgccag
    19621 agcaactttt taaattaagg gtttgagatg ggaatattcg attcgcttta tacaggagca
    19681 tcagggctaa acgccgctca gctccagatc caagtaaccg ggcaaaatat aacaaatata
    19741 aatagtgatt actatactag acaaagagtt gtgcagtcgg ctacaactcc gcttcatact
    19801 tctccgggcg atgttggtat gggaactagg atagatacta taatacgaat tcatgatgaa
    19861 tttacatttg acaagctcaa aactgcaacg acaaataaag aaaataccgc atacaaacag
    19921 caagttcttc aagaaatagc tcaaagattt ccagatctta aagataccgg acttttaaaa
    19981 gatatagaaa attactttgg cgcatggaat aattttgcgt ctcatccgta tgaaagtgca
    20041 caaaaaacta atcttttaaa tttaaccagc actttaacaa atagattaaa cgatacatct
    20101 tctcagctaa aaacagttca taataatata aacgagcaag taaaattagc agtagatgag
    20161 ataaacagga tcggcaaaca aatagcagat ttaaatgctc aaattcaaaa agtagaaaca
    20221 ggcacgactc aaaacgcaaa tgatttaaga gataaaagag atcagctaga gcttactttg
    20281 gcaaatattt taaacatctc aacatttaaa aatgatattt cgagtaatag cacttttgga
    20341 ggtactctta ctgatcaagg aagaaactat aatcttaata tagacggcat aacgctgata
    20401 gatggagtaa attttcatcc tcttactctt gatactaatg gaaataaaga tggatttaca
    20461 aatatatatt atgagttaaa tgacggtacg agagtcgata tggcttcaaa gataaatagc
    20521 ggcaaacttg gtgccatgct tgatctaaga ggcagaacta tgggcgataa tggagaagtc
    20581 aaagatggta tgataactga gtttagaaat aatctcgata cttttgcaaa gacattaata
    20641 atacaaacaa ataatatata cgccagcgca gctcaagaag gtatgagttc aaccgatctt
    20701 tcgcagatga aaccaaacac aactcttcaa aactttgatc aaaatgttca aagcggtaat
    20761 tttgatgtta taatctataa ctctcaaggc gtggaagtag caagaaaaac tataaatgta
    20821 aactcttcaa caaccatgga cgatacaaaa caaggaaatt caatagtcgg cgactttaac
    20881 tcagataccg atgataataa taacggcaac ttaaatgacg atgttaatga ttttttcact
    20941 gcaaagttta actatgatga gaaaacagga cttggtcatc taagtttttc tcctcttttt
    21001 tcatccggcg aatatactat ggcgatagag gataaaggaa caaatttccc cggagtattt
    21061 ggaatgagcc agttttttga aggagacagc gcttcaaata tcaaaataga atcatcatta
    21121 gcaagcgata cttcaaagat taaaggaaat aaagctccgg tagatggaga taatagtatg
    21181 gcaaacgcta tgataaatct tcaatatcaa agtctaaatt tctatgcaaa tgacggaact
    21241 ataagatctg aaacgataac tgggtattat agatatttaa ctaccgatat agcgtcaaaa
    21301 actgaatccg ttaatgcttt aaataacaca aatttatctc tttataaaag tgtaaatgca
    21361 gagtttcagt ctataagtgg tgtaaatatg gatgaagaac ttggaaattt aattaaattt
    21421 caatcaagtt acggggcggc tgcaaagata gtcacaacag tagaaaaaat gttagaaacc
    21481 cttataggaa tgaaacaata attatgaatt atggtttaaa agaaatttta gaaagagctt
    21541 taaaagagaa aaatacttta gaaaatctct atttagaagc cgatccgctg caagtggcgg
    21601 ctaaatttaa aaacgtgcat ataagtctta tttgcgcact tttcgcttac ggaaatgcta
    21661 aagctatagt gaaattctta aattcgctgg atttcgaact tttaagctta agcgatcaga
    21721 ttatagaaaa agagatattg gctcaaaaac gactttatag atttcaaaat ccaaaagacg
    21781 tgtcaaatat ttttatcact ataaaaagag cggcgcaaga agatatacaa gctattataa
    21841 aaagtgggtt tgataaaaat ggacttatga tagacggaat aaattcgctt ataaataaaa
    21901 tttatgattt gaacgactat agaagcgacg gttatgagtt tttctttggc agaagttatc
    21961 aaaacgaacc caaaagtcca tataaacgat ataatatgtg gcttagatgg atggttagag
    22021 atagcgatat cgatcttggt ctgtttaaaa atttgccaaa aagcgagtta ataattcctc
    22081 ttgatactca tacgcataaa gttagtcttg ctctggggct ttgcgatagg aaaagttatg
    22141 attttaaagc ggctaaagag ataactttaa atttaaaaaa ctttgatgct tttgatccga
    22201 taaaatatga ttttgcatta tacagaatag gtcaaagtaa agagcttgat aatgtaaaat
    22261 caaatttaaa aaacatatga agtaaagtaa atttaatatt agttttgata gtattttaat
    22321 gtttctattc taaatttaaa aaggttatgg attatgtttg atacgatttt tagagagtat
    22381 gatatcagag gtatttatga aaaagatcta aacgaaacca gcgttaaagc cattggttat
    22441 tgtttaggtg tagagatggc taaaagagat gttaaaacga taagcgttgg atatgatgct
    22501 aggcttagcg ccgatactct ttttaaatat ttaattagtg gcttaaatga agctaaaatg
    22561 agagtatttg atataggtat gctgcctact cctgttggat attttagtgt ttttacagat
    22621 gtttttgatg caaacgtgat gattactgga agccataatc caaaagagta taatggattt
    22681 aaaataacaa ctcataaaga tagttttttt ggcgcagatc ttcagaaatt aaaagatagc
    22741 gtaaatgaac ttatttcttc taaaaaacag ataaaagata attttgaagc gcaaaaatac
    22801 gatatattaa gcaaatacgt agagttttat aaaaatgagt tttcgcattt gaccggactg
    22861 aaaacaaaga ttatttgcga ttgcgcaaat ggcactgccg gcattacttt agagccgata
    22921 atacaagctt tgagtttaaa cgctactatc ttttataaag agccaaacgg aaactttcca
    22981 aatcaccatc cagatcctag cgaagagaaa aatttaaaag atttaaaaaa cgctttaagt
    23041 ggtgaatacg agattggttt tgggtttgac ggagacgcag atagaatagc tgttttaact
    23101 aaaaaaagaa gcataaaggg tgacgagtta gcctatttgt atgcaaaaaa tatgaaaaac
    23161 cctagggttt taggcgaagt taaatgttcg caaaatatgt atgatgaaat agacaaaatc
    23221 ggtaaatctt ttatgggtaa aacaggtcat agtaatataa aaaaggctat gaaagaacta
    23281 aatatcgata tggctgctga ggttagcgga catatatttt ttaaagagag attttttggt
    23341 tttgatgacg cggtttatgc tatgataaga gttttggagc ttattgcaaa aggatttaac
    23401 cttgatgatg agcttgatag ccttccaaag ttatactcga gcgatgagat aaaaatagat
    23461 accaccgaag agatgaaatt taaaattata gatgaattaa aaaaagaact tcacaatacc
    23521 aaaaacggac ttcctaagat agtcgatgtt atcgatatag acggtgttag gattaaattt
    23581 gaaaatggct ggggtcttgt aagagcttca aatacgacac cggttttagt agctagattt
    23641 gaagccggtt cgttagaaac taaagagctt ttagagcaaa aagtactatc tttagtacaa
    23701 aagttaaagg caaaaatatg acaaatgtaa ttctttgcgg aggtagcgga actagacttt
    23761 ggccgctttc tagagcgctt ttgccaaaac aatttgtaaa aatctttgat aatgattcgc
    23821 tatttagtaa aacattaaaa cgcaatactt ttgctgaaaa tagaataatt atttgtaacg
    23881 aaagtcacta ttttttagcg cttgatgagt gcggaggaaa tagtgctaaa tttattttag
    23941 agccgtttgg aaaaaatacc gcagctccta tagtgttttg tgctttgagc gtagataaag
    24001 atgaaatttt gctagttacg ccaagtgatc atctaatcga gcttgaagac gaatataata
    24061 gatctataaa agctgcagta gagttggcaa atgatggcaa gctagtaaca ttcggtatta
    24121 ctccaaacga accaaatata ggatatggct atataaaagc tgatggaaac aatgttaaaa
    24181 gctttataga aaagccgagt ttaaaaaaag caaaagagct tttggcgcag ggcgattgtt
    24241 attttaatag cggaatgttc tgttttaaag ccggagtttt tattgatcaa atgcagaaat
    24301 atgctccaaa tatacttgaa caggcgcgtc aagctatctt aaatgtagaa aataactcgg
    24361 atataatgcg cattaaacca caatatatgc aaaatatcga tgatataagc attgattacg
    24421 ctttgatgca aaaaagtgaa aatatcgcta tggttccatt gaatgctagg tggagcgata
    24481 tgggaagttt cgatgaatta tccaaaaagg ttcagagttc gccatcaaca agtatagatg
    24541 caaataataa ctttgttatc agctataaaa atagcgcttt agtagatgtg gatgatctta
    24601 tcatagtaga tactaaagac gctcttttgg ttactaaaaa aggtagctct caaaaagtaa
    24661 aaaatgttta taatctgata aaaaaaacaa atccaaattt atgcgaaatt cacaccaaag
    24721 cctatcgtcc gtggggaagt tatgaggttt tagaagatgc tccaaatttc aaaattaaaa
    24781 aaattatagt aaaaccatat aagcgtttaa gtttgcaaaa acatcttcat agaagcgagc
    24841 attgggtggt tgtcagtggt gaagctctag tcacgatcga ttataaagag acacttttga
    24901 aaaataacca gtcgatttat atagaaaagc aaaagctcca tagattagaa aataagcttg
    24961 atacggatct tatccttata gaagttcaag ttggggatta cctcggcgag gatgatataa
    25021 tacgaataga agacgattat agtaggactt aatggtaaat ttaaaaaaag ctgtttgcgt
    25081 gataagcggc ggtatggata gtgctttagc agcgtataaa gctaaaaatt caggatatga
    25141 gatagtagcg cttcattttg attataatca acgcaccatg aataaagaaa gagagtgttt
    25201 taacctaatt tgcgatgatt tagatgttga aaaacgattt attttagatg ttggttttat
    25261 agcgcaaatt ggtggaaatg ctttaacgga taaaactctt aatataccaa aagatggcat
    25321 aagcgaaaat atccctataa cttacgtgcc atttagaaac ggtatatttc ttagtatagc
    25381 agcggctcta gcgcaaaaag aaggttgtga ggctatatat ataggagtcg tagaagaaga
    25441 tagcagcgga tatccagact gcactgaaca gtttataaat tctataaata aggctataaa
    25501 tttaggtacc gcagataata atatagttat aaaaactcct ttagttcatc tctcaaaagg
    25561 tgatatagta aaagaggcta gtagcctaaa agttccatta gagcttactt ggagctgcta
    25621 tgaaaatagc gaatttgcat gcggtacttg tgatagctgc aggttaagac taaaaggctt
    25681 taaagaggca aaactgagcg ataaaatacc ttataaaagc taattaaacg ctattttata
    25741 cttttaaaac gcttaagcta caagataata tttagcctat tgtgatataa taaatgaaaa
    25801 atttaaggaa aatagatgta ccgttttgca ccatctccaa caggagatat gcatataggc
    25861 aacttaagag ctgctatatt taattacata tgctcattac aagataatag cggatttata
    25921 ttacgtatcg aagataccga taatgctaga aacatagatg gaaaagataa agagatcttt
    25981 gatatattga ctaaatttaa tataaaatgg gatacacttt attatcaaag taaaaatctt
    26041 aagtttcatc aggaatttgc agctaaactt ttggctgaaa aaaaagcatt tttatgcttt
    26101 tgtgacgaaa cgaccttaga atctaaaaaa gaagccgcaa aaacagcagg taagccgtac
    26161 agatatgatg gaacttgtga aaatttaagt gatgacgatg ttttaagcaa tccccgtcca
    26221 gcagccgttc gcttgaaaat caaaaacgag ccgcaaagtt tttatgacgc tataaaaggc
    26281 gaagtcaaat ttgaaccgca aaatatcgat agttttgttc ttttaagagc ggataaaact
    26341 ccgacttata attttgcttg cgctatagat gatatgcttg agggcgtcac gtttgttatc
    26401 agaggcgaag atcatgttag taatactcca aaacaaaatt taatccgaga agcgcttggt
    26461 tacaccggta aaatcggcta tgctcatttg cctattatcc taaataaaga aggcaaaaag
    26521 atgagcaaac gtgaaaatag ctcatctgta aaatggcttt taaatagagg ttatatgcct
    26581 gaagccattg caaattatct tattttgtta ggcaataaaa ccccttgcga gatttttact
    26641 ttagaagagt ctttacagtg gtttagtata aaaaatattt cgaaatctcc tgctaaattt
    26701 gacgaggaaa agttagctca aataaacaga gaacacataa aaaaagctag tgacgaaagg
    26761 ctaaaagaac ttggtttatc aaaacctcat ttggctagat tttatactca agagtgtagt
    26821 ttaatttcag aaattaaaga taaaatagat caaatttact ctaaaaaaga tatttcagat
    26881 gagtggaaac aaaatgcaaa tttaataaaa gacgccgttt taaactcaaa tattcctaat
    26941 aattttgatg agttgaaaaa tgagattata caaattacaa atttaaaagg aaaatctctg
    27001 tttatgccat ttcgtttatt gcttacagga agcgagcatg gtccggagct aaaagaatta
    27061 tatgcgctaa tcaaagatga tataaaggag ataatagcaa aatgatggtt ataagcacgt
    27121 ttattatagc actagcaaac ctcttacaca tagtaatcac cgcctatacg tggattatag
    27181 ttgctgcagc gctcattagc tgggtaaatc cagatccgta taacaagata gttcaatttc
    27241 tgcatcgtat aactgcgcct gcttatgagt tagtacgaaa aacaaagata cccactgcat
    27301 ttggcggcat agatatagct ccgattatcg tacttttagc acttcaattc ctagatctat
    27361 ttttagtagg attgttaatt gaaatttcta ctaaaattta gtatatttac agcttttata
    27421 gctgtttttt tggatgccgg agttataagt tacgagcaga taaaacaagc tccaaaagga
    27481 cttgcaaaag attattatat ctatagatac ataaatgaga gtaaaaaagc tactccaaac
    27541 gagataaaaa ctcttagaac cgaaatttat agatactcgg gaaagcttaa aaaagatata
    27601 gaatcgatca taggaccttt aaaagagcga gttgttgatt gtagaggcgt aaatgcaaat
    27661 aatataatag atgctaacgc tacttgtcaa aagatggttt tgagcgttaa atttttacaa
    27721 actatgagta aagacaaaag agacgagttg gcttttaaat ttaaagacgg ttctcccgag
    27781 cttgcaaatt ttattatagg ttttgatgcc ccaaatccag tgaagtatta tatggataca
    27841 aatgatactg taagttattt taagttttat aatacaagca acaataaaga gaagttttta
    27901 aacgataaca atataaccag ttcatttata ccgcacttat ctagtaattg gcaatttaaa
    27961 actcttataa atgacgccgt gatcaacaaa aaatttgata attttaggct gtctttatta
    28021 aatatatcgc cgcagtttgc tagttctgaa atagcgtttt tgcttgggat aaatgctatt
    28081 atttttaata aagacgattt agcgcttgag tttttcaaaa gtgcggcaaa gacttctaaa
    28141 tttgctagtc aaagagataa cgctaatttc tggatatatc ttattacaaa agataagtct
    28201 atcttaaaaa ccatatcaaa aagcagcgat ataaatatgt atagtttgta tgcaagagag
    28261 ttcagcggtg gaggcaagat aaagatagtt gttccagatc cgagcacaaa aactttgtta
    28321 aattatgact atacagatcc gtttgtttgg caaaaaacat taaataaagt agcaaaaatg
    28381 agccagagcg agcttattag gtatggggtt agatttttta ctaaaagtac tcttggcgag
    28441 tacagttata taatggaaaa agctcataat tataaacttc atttttatcc gactccgttt
    28501 atggagcata tcggcacaaa tgatgttaaa aggcaagctc tcatattagc attagcaagg
    28561 caggaaagcc gttttgtacc aagtgcggtt tcgacttctt acgctcttgg tatgatgcag
    28621 tttatgccgt ttttagcaaa tcatatagga aaagagctgg gtatttcaaa ttttgatcaa
    28681 gatgatatgt ttaagcctga gattgcatat aaatttgcga attatcattt ggattatctg
    28741 gaaaaatatc ttataaaccc tatttttata gcttatgctt ataatggagg gataggattt
    28801 acaaaacgta tgcttcaaag aggagatcta tttagtcaaa atagcgaata taaaagatac
    28861 gagccatttt tatctatgga gttagttcct tacgccgaga gtagaacata tgctaaaaaa
    28921 gttcttgcaa actatatcat atatcttgct attttgaatt ccaatacaaa gatttcgcaa
    28981 tttttcgaaa atttaatgat acctggagtg ggcgagaagt tccgtttgaa tctacaaacc
    29041 gctcaaaact aagatttagt gtgtcgctat ttttttgcgg cgcacttacc tttagataaa
    29101 ttccccatgg catttgaaac gttgttagtt ttaaaagagg atcgttatct tctaaaatag
    29161 atattttagt tccgttatta tcatcattta ctttaaatga agagtagttt attttactat
    29221 cttttggata gattgtgata atgaaatgct catttttttt gtctggaaat tcatcttgat
    29281 gaatgggatt tagatatgtt cctacggcta aaaatttatc attcgtatct tcaaatttct
    29341 gtgtgtatgc taaaagctca ttttttaatg gatcttgtat aaccgctttt ttatcgctac
    29401 aagatgctaa aaatatggca aagatactta tcaaaatagc atttttcata gataatcctt
    29461 tttctattat tataacatat ttatctatta ttttatgatt tttacgagct tagagttgtt
    29521 ttttagttgg ataatttgat aagaataatc aaaataagct taaattcagt caagtgataa
    29581 tataataacg aatatcaaaa aagtatcaaa gtatcaagga atattatgtc agtattagta
    29641 ataggcgcag atgaaataac gccgataaaa gctgttttaa gagatttagg tgctagtagc
    29701 attgagcatt gggatgcgag aaatgaaaat agagtaaatc gcaaaccgat tcctcaaaat
    29761 actgaatgtg ttattatgtt aactagcttt ttaaatcata atacgatgaa aaagatcaaa
    29821 ggcgaagcta aaaagcgcaa cattcctata gtgtgtgcta aaagaagcgt aagctgcgtt
    29881 ttttgtgaat attgcaaagt atttggacta gataaagagt ttggttgcca aggctcaaaa
    29941 tgatttctaa attcagcggc ttagacgttt tttatgaaat ttacggcagt ttgtatagca
    30001 gtaataggct cgaaacattt ttaacgcttt ataattcatc tgtcgatgaa ggcttaaaaa
    30061 taccctataa atatataaaa aatagtcaaa gcgtaggtca tatatttcat ttaagagtaa
    30121 atgatttgct aaatattaag ccgtttaaat ttacaaaatg tgttattttt tgtttgattt
    30181 caaatgctat aattcgcgca tttttagatg gaaaagagtt gcctattttt gctcgtgagc
    30241 caaaaatgag agttgcaaaa cttatcaaaa ctgcattttc aaatgctaaa tttgatatgc
    30301 aatttatgtt cagtgagtat gtttttgata agatttcaaa gcgtcatcca tataaagtgg
    30361 tagatatgaa agatggtttg attttgctaa aggatggtga aaaaactatt ttaggggtga
    30421 tagcattttt caagctagtt gatagcgact atgaaaataa tctactagct gaaataaatt
    30481 ttgctcacca aaaaagcaga gatataggca ctgatctata tatggcattt cctagaaatg
    30541 tgaattttac tagatatata gatataaaac aaaatggagc tagactaagg ctcgttccat
    30601 ataaaatttg taataaaatt tatgataaag gatattaatg acaggtataa tttatggtag
    30661 cagtatggga aatactgaag aagcagcaaa tttaatagct gcaaatctag gcattgacga
    30721 agttctaaac atcgccgata ctgatgcggc tacgataaat ggctttgata agcttatcat
    30781 cggtagctct acttggggaa gcggagattt acaagatgat tgggatagct ttgattttga
    30841 taagcttgaa gttagcggca aaaccattgc tctttttggt atgggagata gctcaagcta
    30901 ttcagataca tactgtaacg ctatgggaat attatacgaa aaattatctc aaaaaggcgc
    30961 aaatatagta ggtgctatat ctacagatgg ttatgaattt gatgaaagtg aagccgtaaa
    31021 ggatggtaaa ttcgtaggac ttgcgctaga tgcggataat gatagcgata aaaccgaaga
    31081 tcgcataaag gcttgggtag agataataaa acccaacttt tcatagttaa ttttgcactt
    31141 gcattaactt ctgctagccg ctcattctag ggcggcttat tttaaattca ataacttttg
    31201 ctaaaatctt ttttattaaa tttaaggaga caatatgcca ttacttgata gttttaaagt
    31261 agatcatacc attatgaatg caccaggagt tcgtttagct aaggttatga atactccaaa
    31321 aggtgataaa ataactgttt ttgatcttag attttgcaag ccgaatattg aaattttacc
    31381 gcaaaaaggt acgcatactt tagagcatct gtttgccgga tttatgagag atcatttaaa
    31441 taataacgac gttgagataa tagatatatc ccctatgggc tgtagaaccg gattttatat
    31501 gagtcttata ggtacaccgt cttgggagat ggtagcaaaa gcatgggaag agtctatgaa
    31561 agatatatta aacgtaaaat ctcaagatga cattccggag ttaaataaat atcagtgcgg
    31621 aacatgcaca ttgcactctt tagatgaagc tcaagatatt gctagaaata ttttagctaa
    31681 aggtgtcgga tatatagata atgaagctat aaagctagat atgagtaaga tttagtttct
    31741 cattgcagag tgcgttatag atataaattt atatttaata tttttatcgc atctctgctt
    31801 ttataaatac cttaaattta gtttaacgta tagttgttca aatcccaatc aatcggagtt
    31861 tgaccgtttt ttataagata attattgcat tttgagaagt gacgtgagcc aaaaaatgct
    31921 ccacgtgcaa gcggactcgg gtgagctgct gttagtacta gatgtttatt agcttctatc
    31981 aggtttgctt ttgctcttgc ataattcccc caaagcataa acaccacacc tgtttttttc
    32041 tcgctgatat tctttataac ggcatcgcta aatatctgcc agccgaaatt agaatgcgaa
    32101 tttgccattc tagccccaac gctcaatgtc gcatttagca acaaaactcc ttgttttgcc
    32161 cagtatgata gatcgccgca atttggttct attataccta agtcgtcttt tatctcttta
    32221 tatatatttg ctaaacttgg tggcactctt acgccttttg gcacagaaaa gctaagtccc
    32281 attgcttctc cttcgttatg ataaggatct tgtcctaata taactacctt aactttatca
    32341 aatggtgtta gattaaatgc gttaaatatg aggttgcttg gaggatatac tttgccgttt
    32401 tttagtgcgt ttattaaatt aaatttaatt tctaagaaat acgaacttag gaattcgtct
    32461 tttaatactt ctttccagct atcttcgatt ttaactttag ctaaatcaat agtcatagtg
    32521 taaatttaaa attgagtcca agttggactc aatgattata gagctttttt agcctctgct
    32581 acgatagcag caaatgcggc cgcatcattc atagctaaat ttgccaaaac ttttctgtct
    32641 aatgctatgt ttgctttttt aagaccattc ataaatcttg aatagctgat atcatttagt
    32701 ctgcaagctg cgttgatacg gatgatccat aagcgacgga aatcacgttt tttcgcacgt
    32761 ctatcacgga atgcataaac taaacttctt tctaattgtt cttttgcttt tctaaaatgt
    32821 ttatgtctag cgctgtaaaa accgcgagct agttttagaa cttttttatg gcgtcttctt
    32881 cttactacgc ctgttttaac tcttgccata tttatccttt acaaattggc gtccaaattc
    32941 ggaacttgtc ctaagctttt tggctaagga ggtttaaatg actttcgtca aaaacttata
    33001 tacaaagcat ttttttaacg gctgaaacat tagtactatc tacatattga gattgtctaa
    33061 ggtctctcat acgcttactt ggtttttttg ttaagatatg gcttctaaat gctgagcctc
    33121 tttttatctt atttttacca actttaaagc gcttagctgc accgcgaaca gatttcattt
    33181 ttggcatgct aatcctttac ttcaaaatag gtgctgattt taccagaatt ctctttaagt
    33241 atagataaat ttagatttcg aatatttttg ttgctaatat gtaaatattg ataattaata
    33301 ttatatttaa aaatcataga tatacttaaa taaacaaaat tttaaaaata aggataagtg
    33361 aatgaaaaaa agagtactgt ttttaggact tttagcaagc gctatgttag ctagtgaagt
    33421 aaatttatat accgcgagac actatgatgc agatcagaaa atttacgatg catttgagaa
    33481 aaaaacaggt ataaaagtaa aagcaactca agcaaaagct agtgagctta tcaaaaaact
    33541 tgagattgag ggagctagct catctgctga cctttttata actgccgatg ttgggaattt
    33601 atactctgca aagcaaaaag gcgtacttca aaaagtaaat tctgaatatt tagaaaaaac
    33661 cataccgcaa aatctaagag acatcgactc acaatggttt gccgtgacaa aaagagctag
    33721 agttatagtt tattcaaaag ataggtttga tcctgctaaa atgggactta aaaattatga
    33781 agatctagga aattcaaatt taaaaggtaa actgcttata agaagcggaa cggctgggta
    33841 caacacaact cttatcgcct ctttaattgc gcataatggt gaagaaaaaa cccttgaact
    33901 atctaaaagt atcgtatcga attttgctag agctccaaaa ggaggcgata gagatcagat
    33961 caaagcgata tttgccggcg agggagacgt agctcttgtt aatacgtatt atataggtct
    34021 tatgctaaac tcaccaaaag caaatgacgt agatgctgca aagagcatag gcatcatttt
    34081 tcctgatcaa gatagctatg gtactcacgt aaatatcagc ggtgttgcgc ttacaaaagc
    34141 tagtaaaaat agagaaaacg caattaaatt tatggaattt ttgctaagtc ctgaagccca
    34201 agaaataata acaaatatca attacgaata tccggtaaat aaagacgtaa aaccgagtca
    34261 aactactgct aatttcggtg agtttaaagc agatgaaatc tctttaagca aagttagcga
    34321 aaatatcaaa aaagccgtat ttttagtaga tcaagccggt tggaaataag tgaaaatact
    34381 taaattaggg gcgatttttg tcgccctagt tatcgttttt cctctatttt ttatatttat
    34441 agagatgttt ttcggtgatt tttcgcttct aaatcatttt agtaaatatc tgctttcggg
    34501 atatataaaa gatacttttt tactcttatt cggtgttttg gtatccacta tcacaatagc
    34561 ttgtataagt gcatatttgg tcgtgaacta taaatttcca tttagtagat tttttgagtt
    34621 tgctcttgtg cttcctttgg caatccctgc ttatatattt agttttgctt atgtggggct
    34681 tatggattat aatggcgaat ttatgaaagt ttttggattt cgcatagata tgatgaatat
    34741 ctggggtgcg atttttgtga taagcttatc gctatatccg tacatctata tgtttgctaa
    34801 aactagtttc aaaacgggaa gtaaaacggt atttgagttg gcaaaaattt acaatatcaa
    34861 tggatttatg acatttttta agatatcttt gcctcttgca agacctgcta tttttggtgg
    34921 agctatgcta gtagccatgg aaactttgag cgattatgga acggcggctt attatggagt
    34981 aaatactttt agtgccggaa tttttaaggt ttggtatgat cttgatgatt catatctggc
    35041 tagttttttg gctggaattt taatggttat agtatttttt attatgtttg cagaatatct
    35101 taataaaaaa tcctatagtt ttaacaataa tacttctctt agtctaaaac ctgcaaatct
    35161 ctcaaaaata gctaaatttt ttgcgttttt atggtgtttt acactattta tgatagcttt
    35221 tgctttgcct ttttactggc ttgtttattg gtcgattttt ggtgacgtga aatttgatgc
    35281 gggttttatc aaaatggctt caaactcact atttatcgct attttagctt ctgttttgat
    35341 agttgctgta gggctatttt tgacattttc atcaagattt tttgtttcaa aactgataaa
    35401 aactatggtt ttaagatgtt cgtctcttgg gtacgcgctt cctggagcta gtgttggagt
    35461 ttgcgtgatg atagtttttg gttatataga tagaaatttc ggcacgagtt tactctcaag
    35521 tagctttgtg gtgctgatgt ttggatatct tgtgcgcttt atgactgcta gtatttacgc
    35581 tcttgatagt ggttattcaa agatttctaa atttatagat gacgcgtcta aagttatgaa
    35641 aattagcctt tggaacatgt tttttaaagt gcatttaccg cttttgaaac attttatttt
    35701 gctagctttt actttagctt ttgtagatat agtaaaagag cttcctctga gtttgatttt
    35761 acgtccattt gagtttgaaa ctctaagtat tagagcgttt ttttacgcga ctgatgagag
    35821 actttattct gccgcgttgc caagtttgct tatagttttg atatcattat gcgctgttgt
    35881 ttttgtagaa gtttatgctc ataaaaagtc caaacagagt atttaattac agagatattt
    35941 aaatttttta atttatgcag tgtaaatcaa gcagaaaaaa actgctcatt tttgagcagt
    36001 tttagggttt cctaaattta aattatcctc tttgtagtta aatcctccgc caagagattt
    36061 atacacatca actacgctag tagcgacgtc taattttgat tgagctaggc tgagtcttgc
    36121 cgataaaaga tttctttgcg agtctaaaaa ctcaagatga gtgctatatc catcatcata
    36181 tctggctttt gataagtcat aaacttttgt ttgagatttt actaaatctt gcatgctttg
    36241 ttcttttaaa actgagtttt ttcttgtatc aagagcggtt cttatctcgc caaatgcagt
    36301 ttttacggct ttatcgtatg ataaaaaact agcattttgc tctaagtttg caagttcaac
    36361 tctatttttt gtccttccaa aatcaagcag aggcatcata atacttccac ctacgctcca
    36421 tatatttgcg ttatttacaa aaaatctatt aaactcatcg ctactaaatc caaaaattcc
    36481 agtaagcgac aattgaggta gccaagccgt tctagctact ccaactaaga aatttgaagc
    36541 tttaagtctt tctaatgaac tagctatatc tgctctgtgc aaaagaacat ccgaacttat
    36601 accgcttgga acttctggca tagtcggaag agtgttagga gagtctatgc tctgatataa
    36661 aatatcattt aaatttttac ctactaacac gcttagagca gaatttgttt gtgcaatttg
    36721 agtttggata cctataagtt gagttttagc gctgtgcact gctgcttggg cttgataata
    36781 cgtaagttca tctatagctc ctgcattaag ctctttttgt ctatagatga gcgtttcttc
    36841 ataggtatta agagtttcat tgagtatatt ttcttgctct tttaacgata ttagcatgaa
    36901 atatgtattt gctgtagtac tcgctatgct taacatcgcg ctatcatagt cgtattttgt
    36961 agctttgaag atggcctcgc ttgcatttgc gctatccctt actctgcccc aaagatctat
    37021 ctcgtagcta agagccgtat ttaggctaaa tgcgttgtat tttttattat cttgccccat
    37081 gtatgtttca ccgcttgagc ggtttttggt tgcttcaccg tttaaattta tatttggaaa
    37141 tagctcaacg ttagctaaat ttagattgat tttagcttgt tcgatattat ttaaagctat
    37201 caataaatcg ctgttgtttt taagggcctg agagatgaga gagtttagtt tttcatcccc
    37261 aaaactctcc caccattttt cattgatact ataaacatca aatttatact cgtatgtttg
    37321 ttgtatctct atcatatcag gttttaaaga gcatcctgct acaaatgctc ctattagtaa
    37381 aataagtgct gttttacgca tgttcttctc ccgaggttat tttaccacgt ttgttgtcta
    37441 accacaaatt gaaactttct aatatataga aaaacagcgg cacaaagaaa atcgctatcg
    37501 tagacgccgc tatcataccg cctataactc cggttcctag tgcgtgacga gacgcagctc
    37561 ctgctcctgt ggcaacaacc ataggcaaaa ctccaagagt aaatgctaaa gaggtcatca
    37621 cgataggtct aaatctcatt ctagcagcgt ttatcgcggc ttcttttatg gattttcccg
    37681 ccaaatgctc ttgcatcgca aactcaacta tcaatatcgc atttttagcc gctaatccga
    37741 taagaagcaa aagtcctatt tgaaaatata catcattgct aagtcctctt gtccatgtaa
    37801 aaagaagtga gccaaatact gaaaaaggaa ccgcagttac gactgctaat ggcataagcc
    37861 atctttcata ttgtgccgca agtatcaaaa atacgaatat cataccaaat acaaatgctt
    37921 gagcaccttt acctgttgac gctacttctt gatacgccga gcccgaccat cctatatcgt
    37981 atcctgttgg aagctcttct ttgataattt gttcaattgc ttttatagcg tctcctgaag
    38041 tgtatcctgg ttttggttcg cccatgatct tggctgcagg aaatgcgtta aatctatcta
    38101 cgttatctgg tcctaagctt ctttttaatg atactaccga gtctaacggt accattttgc
    38161 cgtcctggct tctaacatat aatgaacgta aatcctccgg tgagtctcta tactctgaca
    38221 ttgatcttat atttacttta aatgttttac ctagcatatt aaagtcattt acataatact
    38281 gacctattgt ggagcttaaa gtattaaata cgtctgatat atttattccc atcatcttga
    38341 ttttttcttt atcaagagtt agatcgtatt gagggaaatt tgtatcaagc gtagtacgaa
    38401 ccatatttaa agccgggtga gcatttgctt ttgctaccac tttttgcata tctgcttcta
    38461 tttgagagta gttcttaccc tccgtatttt gtgcaaatag ctcaaatcct cctgttatag
    38521 atagtcccat gatgggaggc ggagtcataa aatacgtcat agagtttcta tctgccatat
    38581 acatctgttt attatattga gctgcaaacg ctgcagttga gttggcttct cctggtctct
    38641 cattccatgg tatcatactg ataaacatta tacccgcgtt ttctctaaga gtgcccgcca
    38701 acatatcgta tcctgcaagt ccggttacgt tttttacgtt tggattttga gatataatgc
    38761 ttcttataaa ctctgtatct tcagtagttc tactaagagt cgaagcagga ggtaaatttg
    38821 ttatagctaa aacagaacct ttgtcttcag caggaacgag cccccctgga acgactttaa
    38881 atagttctgc catcataaat ataattattc ccacgcatat taagctcata atgacatgtt
    38941 ttaaaatttt agctactccg gccgtgaaaa ttttggttga aaagtcaaag aattcattaa
    39001 atttacgcac aaaccaaaac ggaggattct cttttttgcg aagtatcatg gcacacaaag
    39061 caggagtaag ggttagcgca acaagtcctg atatacaaac agatacgact aaggttagcg
    39121 caaattgtct ttgtatgacg cctacaaaac cttccataaa agataccggt ataaaaacag
    39181 ccgaaagtac caaaactata gatataacag gcgctactat ctcgctcata gcttttatag
    39241 tcgcttcttt tacggtgaga tttggctctc catgcaatat ccgttctacg ttttctataa
    39301 cgataatagc atcatcgacg actattccta tggctagtat aagtgcgaac aatgttatca
    39361 aatttataga aaaccccata gcataaagtc cgccaaaagc tcctaaaata gatacaggca
    39421 ccgccaacat aggaattata gtagccctta cgtttccaag gaacatatac ataactataa
    39481 caactaaaat catagcttca ataaatgttt ttataacttc atctatagat actttaacaa
    39541 attcagtcgt gtcgtagccg actatatatg ttaaatctcc tggaaaagag gctttgagtt
    39601 catctactct ttttacgata gcatcagctg tattaagagc gtttgcaccg ctttgtaaaa
    39661 acacaaacat aggtatcatt gtagcgccgt tgattcttcc tgcaaatgtg tagttttgtg
    39721 cgccaagctc cacggttgct acgtctttta gttttattat attgcctttg ttgttggctt
    39781 ttataataat attttcaaat tcagaaacat tttttagtct tccttcgggt tttatggcat
    39841 aaacataagg attgcttgtt tgagtcggct gttcgcctat ttttcctgta gcatactgac
    39901 tattttgctc ttttatagag tttatcacgt ctgttgttgt taaagagtat tttttaagga
    39961 gatctggttt tatccaaacc ctcatagagt agtctttgtt tcctataaca acagcgtctc
    40021 caactcccgg aactcttttt atggcatcag ctacgttgat atttatataa ttgctgatct
    40081 cggtatcgct cattttacca cttgggtcat aaaacgataa aacatttagt atagaactgc
    40141 ttctttctct aacagtaaca cctactcttt ttacctcctc agggagcaaa gacaaagcag
    40201 gagttacgcg gttgctgaca tttaccgttg cggtttgcgg attcgtgccg attttaaaat
    40261 acacgcttag actcatagtt ccagcagagc ttgaagtgct ttgcatatat atcatatctt
    40321 gaacgccgtt tatagcattt tccaaaggag ctgctatagt atcggctata gtctgtgcgt
    40381 ctgcaccgct ataattggct tgaaccatga tttgaggcgg agtgagctga ggatactctt
    40441 ctatcggaga gcttttgagt ccgatatagc cggcgatgac gattattatc gacaaaacgc
    40501 aggcgaatac cggtctgttg ataaaaaatt tagaaaacat tatttgcttc ctttggcatc
    40561 atttatcgcc tgaaccggtt gtcctatatt tatttttttg aaattatcca ttattattag
    40621 atcgccgtca tttataccgc ttgatataac tgctgatgtt gagtcttgag atactatttt
    40681 tatagggttt ttagctactt ttccatcttt tagcgtatat acaaatgggc tggctaaatc
    40741 ttgcaatata gcgacttgtg gaattttaaa gccgtttttt tgataaaatc catatacatt
    40801 tacgcttgca aatatacctg gacgaatttg agttgagttg ttttcaaaca tagcttttgc
    40861 gttaacagta ccgctaccct cgtcaataac gttatctata aaagtaagag taccgttata
    40921 atctccgttt tgcatactca aagtgacgag cgagtttaat tgctcccact ctttagtgcg
    40981 agttttttga gcgatattta acttatccac atccgatatt ccgaatttaa caaaaatcgg
    41041 atttagttta gtaagtctta ctaaatcggc gtctgatgag cttacgtatg agccgacgtc
    41101 ttttaaagtg tcgcctaaaa ctccagaaaa aggagccgtt acagtagaat aatcaagatc
    41161 gatttttgca gtttgtacgt ttgcttttga ggctaatacg ctagcttttg cagattcata
    41221 agccgctaaa gccgcgtcat actctttttg agagattgcg cttttttctt gtaatttttt
    41281 tgccctatca aagtcagatt ccgcgttttt taaatttgct tgcgatactt gtaaatttgc
    41341 aaatgcgcta tcatacgcag ctctgtattt tgcttcatct atctggtata gtttatctcc
    41401 ttcttttacg cttgctccgg ctttaaaaaa ttgtttttct atagttcctg ctacttttgc
    41461 ttttaaaacg acatccatat cgctaactgt ttgaccatta aatgataaaa caataggtat
    41521 atcacccatt tttgcttgca taacagttac tggcataggc ggtatctgtt gctgggcggc
    41581 tgatttttta ttatctgagc ctaaacatcc agctagtatc aaagatgagg tcaggataac
    41641 aaaattaaaa aatttattca tttatttacc tttcaaattt tcatttttaa atttagtaat
    41701 gataattaca aaatagtttt gaattataca taaaatttat taaacatt
//
LOCUS       DAPPKW010000005        41235 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.005, whole genome shotgun sequence.
ACCESSION   DAPPKW010000005 DAPPKW010000000
VERSION     DAPPKW010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 41235)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41235)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41235
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.005"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            553..747
                     /locus_tag="RPW04_000249"
     CDS             553..747
                     /locus_tag="RPW04_000249"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294376.1"
                     /translation="MEKNDQNSIKNIYIGKTSSRGGVFAKIKVNAQPVNSCLTTIARL
                     PCKSCKNKAEKTVSNKIVPI"
     gene            complement(1019..1095)
                     /locus_tag="RPW04_000250"
     tRNA            complement(1019..1095)
                     /locus_tag="RPW04_000250"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1059..1061),aa:Arg,seq:cct)
     gene            complement(1149..3224)
                     /gene="fusA"
                     /locus_tag="RPW04_000251"
     CDS             complement(1149..3224)
                     /gene="fusA"
                     /locus_tag="RPW04_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDX6294377.1"
                     /translation="MSRKTPLNMVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVH
                     DGAATMDWMEQEKERGITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGA
                     VAVFCAVGGVQPQSETVWRQANKYRVPRMVFVNKMDRVGANFFNVEEQIKNRLKANPV
                     PIQIPIGAEDEFKGVIDLIEMKALVWEDDTKPTDYVTKDIPAELLEKAQEYRAKMIEA
                     VAETDDALMEKFFGGEELSVEEIKRGIKAGCLAMTMIPMLCGTAFKNKGVQPLLNAVV
                     DYLPAPDEVAAIRGELEDGSEVVVDSTDNGEFAGLAFKIMTDPFVGQLTFVRVYRGQL
                     ESGSYAYNTVKGKKERIGRLLRMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLAGEK
                     EHVILEKMDFPDPVISVAVEPKTKADQEKMGIALQKLAQEDPSFRVSTDEESGQTIIS
                     GMGELHLEIIVDRMLREFKVEAEVGQPQVAYRETIKKSVEQEYKYAKQSGGRGQYGHV
                     FLRLEPLEPGSGFEFVNDIKGGVVPREYIPAVEKGCQEALQSGVLAGYPVEDVKVTLF
                     DGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEEYMGDVIGDLNK
                     RRGQINSMDERAGNKIVTAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYEEVPKNVS
                     EEIIKKRNG"
     gene            complement(3237..3707)
                     /gene="rpsG"
                     /locus_tag="RPW04_000252"
     CDS             complement(3237..3707)
                     /gene="rpsG"
                     /locus_tag="RPW04_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDX6294378.1"
                     /translation="MRRRKAPVREVMPDPIYGNKIITKFINSLMYDGKKSVATEIMYG
                     ALKTIDAKGGDLKGINVFNDAIDNVKPIMEVKSRRVGGATYQVPVEVRPARQQALAIR
                     WIISFARKRSERTMMEKLAAELLDAANSKGASFKKKEDTYKMAEANKAFAHYRW"
     gene            complement(3774..4157)
                     /locus_tag="RPW04_000253"
     CDS             complement(3774..4157)
                     /locus_tag="RPW04_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDX6294379.1"
                     /translation="MPTINQLVRKERKKVIVKSKSPALKECPQRRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTSGFEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGAL
                     DTAGVAKRTVSRSKYGAKRPKDAKK"
     gene            complement(4338..8864)
                     /gene="rpoC"
                     /locus_tag="RPW04_000254"
     CDS             complement(4338..8864)
                     /gene="rpoC"
                     /locus_tag="RPW04_000254"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDX6294380.1"
                     /translation="MSELKPIEIKEDAKPRDFEAFQLRLASPDRIKAWSHGEVKKPET
                     INYRTLKPERDGLFCAKIFGPIRDYECLCGKYKKMRYKGIKCEKCGVEVTTSKVRRSR
                     MGHIELVTPVAHIWYVNSLPSRIGTFLGIKMKDLERVLYYEAYIVENPGDAFYDNENS
                     KKVDLYDVLNEEQYVLLEQKFSESGFKARMGGEVIRDLLASLDLVSILDQLKIEIEST
                     NSEAKKKTIVKRLKVVESFLNSGNRPEWMMITNLPVLPPDLRPLVSLDGGKFAVSDVN
                     DLYRRVINRNTRLKRLMELDAPEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPL
                     KSLSEIIKGKQGRFRQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPKKMALELFKPHLL
                     ARLEEKGYATTVKQAKKMIEDKTNEVWECLEEVVADHPVMLNRAPTLHKMSIQAFHPV
                     LIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSQEAIAECKILMLSSMNILLPASGKA
                     VTVPSQDMVLGIYYLSLEKNEAVGANKIFASVDEVMIAVEAHYLDLHAKIKTMVEGRT
                     VFTTAGRLIIKSILPNLKENSVPESMWNKVMKKKDIANLVDYVYKNGGLEVTAGFLDK
                     LKNLGFRYATKAGISISIADIIIPESKYSYVDEAKKRVREIQNQYGSGLLTDSERYNK
                     IVDIWTDTNNKVAAEMMKLIKTDKSGFNSIYMMADSGARGSAAQIRQLAGMRGLMAKP
                     DGSIIETPITSNFREGLNVLEYFISTHGARKGLADTALKTANAGYLTRKLIDVAQNVK
                     VTMDDCGTHEGVEITEITENGELIESLEERVLGRVLSDDVIDPITNEILFTEGTLIDE
                     VKARTITDAGIKSVSIRTPITCKASKGVCSKCYGINLGEGKLVKPGEAVGIISAQSIG
                     EPGTQLTLRTFHIGGTASTEQQDRQVVAQKEGFIRYYNLKTYENNNKFIVTNRRNAAI
                     LLVEPKIKAPFDGEINIEVAHEDINVIIKGKSDEVKYVLRKHDLAKPNELAGVSGKVE
                     GKFYIPYIKGDKVKENESIVEVIKEGWNVPNRIPFASEVKVADGDPVTQDILSGANGV
                     LKFYILKGDYLERIKNVKKGDMVSEKGLFVVIADDDDREAVRHYIPRNSVIKFNDSDI
                     VSAKDTIAKPQDGSKLVIAEWDPYSTPVIAEEAGTVAYEDIEPGYSVAEQYDEATGES
                     RLVINEYLPSGVKPTIVISTKSGKLIRYQLEPKTAIFVKDGAEVSRADTIAKTPKAVA
                     KSKDITGGLPRVSELFEARRPKNTAIIAEIDGTIKFDKPLRSKERIIIMAEDGSSAEY
                     LIDKSRQIQVRDGEFVHAGEKLTDGLVSSHDVLRILGEKALHYYLISEIQQVYRSQGV
                     AISDKHIEIIVSQMLRQVKIVDSGHTNFIVGDMVSRRKFREENDRIMKIGGEPAIAEP
                     VLLGVTRAAIGSDSVISAASFQETTKVLTEASIAAKFDYLEDLKENVILGRMIPVGTG
                     LYQDKKVKIKINED"
     gene            complement(8857..12996)
                     /gene="rpoB"
                     /locus_tag="RPW04_000255"
     CDS             complement(8857..12996)
                     /gene="rpoB"
                     /locus_tag="RPW04_000255"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002867605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDX6294381.1"
                     /translation="MLNSLYSGNRLRVDFSNVAKEIDVPNLLQLQKKSFDHFLNLDNS
                     QTESGIEKVFKSIFPIHDPQNRLTLEYVSSEISKPRYTVRECMERGLTYCVNLKIKIR
                     LIVHDRDEKTSEKVGVKDIKEQEIFVREIPLMTDRISFIINGVERVVVNQLHRSPGVI
                     FKEEESPTVVNKLIYTAQIIPDRGSWLYFEYDTKDVLYVRINKRRKVPITILFRALGY
                     KKQDIVKLFYPIQTLNIKNNKFLTMFNPDDFSGRVDYDIKDEDGNILHQAGKRLTKKK
                     ADKLIEDGLKFVEYPIEVLVNRYLASPVIDKESGEVIYDTLTQLDENKLAKIVAEQNS
                     IEIANDLASGVDDAIINSFLQDYETLKLLKQTEGLEDENDLAAIRIYKVMRPGEPVVK
                     EAARTFVNDLFFNPERYDLTKVGRMKMNHKLGLSVPEYVTVLTNEDIIKTAKYLIKVK
                     NGQGYIDDRDHLGNRRIRSIGELLANELHLGFVKMQKAIRDKFTSLSNNVDELMPYDL
                     VNPKMITTTIMEFFTGGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKERAGFEVRDV
                     HPTHYGRICPVETPEGQNIGLINTLSTYAKVNDLGFVESPYRRVIDGKVTNEIVYLTA
                     TQEEGHIIAPASTVLDANDIIKEDLIEVRRDGEMLLAKREDVTLIDLCSGMVMGVAAS
                     LIPFLEHDDANRALMGSNMQRQAVPLLRSTAPIVGTGMEAIVARDAWEAIKAKRGGVI
                     EKVDNRNIFILGEDENGPYIDQYTMEKNLRTNQNTTFSQHPIVKKGNMVKSGQIIADG
                     SSMEKGELAIGKNALIAFMPWNGYNYEDAIVMSERMIRADAFTSVHIYEKEIEARELK
                     DGVEEITRDIPNMKEEDLMHLDESGIVKIGTHIKPGMILVGKVSPKGEVKPTPEERLL
                     RAIFGEKAGHVVNKSLYAGASLEGVVIDVKIFTKKGYEKDARSFKAYEDEKNILEKEH
                     HDRLLMLDREEMLRVTALLSKNPLESELEIGKNSYKKGDKIKRSDLDNVNRFTLNTYV
                     KCFSKEIQKTYEDMKAYFQNEKKKLKDEHDAKLEILEKDDILPSGVVKLVKVYLATKR
                     KLKVGDKMAGRHGNKGIVSNIVPDVDMPYLPNGRTVDIVLNPLGVPSRMNIGQILESH
                     LGLVGMKLGEQIEEIFENKKAEWIKELRAKMTEIADVSRLMDAKAILSKIDDDKLIDY
                     ARDWASGVRFATPIFEGVKADEFKKLFEMAKIDMDGKTELYDGRTGSKMAERVNVGCM
                     YMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALSGGQRFGEMEVWALEAYGAAHTLR
                     EMLTVKSDDVEGRLAAYKALTRGENVPSTGIPETFFVLTNELKSLALDVEIYDEEENN
                     E"
     gene            complement(13097..13471)
                     /gene="rplL"
                     /locus_tag="RPW04_000256"
     CDS             complement(13097..13471)
                     /gene="rplL"
                     /locus_tag="RPW04_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDX6294382.1"
                     /translation="MAITKEDVLEFISNLSVLELSELVKEFEEKFGVSAAPVMVAGAA
                     GGAAVEAAEEKTEFNIVLVDAGDKKINVIKVVRALTGLGLKEAKDAVEGTPSVLKEGV
                     SKDEAEAAKKELEEAGAKVELK"
     gene            complement(13504..13989)
                     /locus_tag="RPW04_000257"
     CDS             complement(13504..13989)
                     /locus_tag="RPW04_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDX6294383.1"
                     /translation="MTRNEKAEIISNLEAEFKTSDAIVVCDYKGLSVKKLEALRNSAR
                     ELNVKVQVVKNTLANIALNNCGKSGMELKDTNIFVWGEDQLAVTKVVAKFEESNNELF
                     KIKTAHIDGEVASVSKVVALSKMPSRDELIAMLLQVWNAPIQNFTIGLNALREKKEQT
                     A"
     gene            complement(14095..14799)
                     /locus_tag="RPW04_000258"
     CDS             complement(14095..14799)
                     /locus_tag="RPW04_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDX6294384.1"
                     /translation="MSKKVTKRFSELLKKVDSDKIYTLDEAVSTVKTLASAKFDETVE
                     IALKLNVDPRHADQMVRGSVVLPAGTGKTVRVAVIAKDAKADEAKAAGADIVGAEDFV
                     DEIAKGVINFDVLIATPNLMGLVGKIGRLLGPKGLMPNPKTGTVTMDVAQAIKNAKGG
                     QVNFRVDKQGNIHAGLGKVSFSKDQLNDNISAFIKMINKHKPAASKGRYIKSAALSLT
                     MSPSITLEPQELMDLK"
     gene            complement(14859..15284)
                     /gene="rplK"
                     /locus_tag="RPW04_000259"
     CDS             complement(14859..15284)
                     /gene="rplK"
                     /locus_tag="RPW04_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDX6294385.1"
                     /translation="MAKKVVGEIKLQIAATKANPSPPVGPALGQQGVNIMEFCKAFNE
                     RTKDMAGYNIPVVITVYADKSFTFITKQPPATDLIKKAAGITKGADNPLKNKVGQLTK
                     AQILEIVDKKIVDMNTKDKEQAAKIISGSARSMGITVVD"
     gene            complement(15302..15832)
                     /gene="nusG"
                     /locus_tag="RPW04_000260"
     CDS             complement(15302..15832)
                     /gene="nusG"
                     /locus_tag="RPW04_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004322123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDX6294386.1"
                     /translation="MAHKWYAIQTYAGSEMSVKRAIENLVVDHGIEEQLLEVVVPTED
                     VIEIKNGKQKINERSLYPGYAFAHLDLDTALWHKIQSLPKVGRFIGESKKPTPLSDKD
                     INLILEKVNKRAAPKPKISFETGEVVRVTEGPFANFNGTVEEYDMVHGKLRLNVSIFG
                     RSTPVEILYSQVEKIV"
     gene            complement(15842..16021)
                     /gene="secE"
                     /locus_tag="RPW04_000261"
     CDS             complement(15842..16021)
                     /gene="secE"
                     /locus_tag="RPW04_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDX6294387.1"
                     /translation="MEKFISYFKLSRAEIGKVIFPTKEQIRNAFITVFAVVAIVSLFL
                     ALVDLIMSFTVSKLA"
     gene            complement(16035..16110)
                     /locus_tag="RPW04_000262"
     tRNA            complement(16035..16110)
                     /locus_tag="RPW04_000262"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(16075..16077),aa:Trp,seq:cca)
     gene            complement(16137..16304)
                     /gene="rpmG"
                     /locus_tag="RPW04_000263"
     CDS             complement(16137..16304)
                     /gene="rpmG"
                     /locus_tag="RPW04_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010401324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDX6294388.1"
                     /translation="MASANRVKIGLKCAECNDINYTTTKNSKTTTEKLELKKYCPRLK
                     KHTVHKEVKLK"
     gene            complement(16352..17551)
                     /gene="tuf"
                     /locus_tag="RPW04_000264"
     CDS             complement(16352..17551)
                     /gene="tuf"
                     /locus_tag="RPW04_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDX6294389.1"
                     /translation="MAKEKFSRNKPHVNIGTIGHVDHGKTTLTAAISAVLSRRGLAEL
                     KDYDNIDNAPEEKERGITIATSHIEYETENRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKADMVDDAELLELVEMEIRELLSE
                     YDFPGDDTPIISGSALQALEEAKAGNDGEWSAKIMDLMAAVDSYIPTPVRATDKDFLM
                     PIEDVFSISGRGTVVTGRIEKGIVKVGDTIEIVGIRDTQTTTVTGVEMFRKEMDQGEA
                     GDNVGVLLRGTKKEDVERGMVLCKPKSITPHTKFEGEVYILTKEEGGRHTPFFNNYRP
                     QFYVRTTDVTGSITLPEGTEMVMPGDNLKITVELINPVALEDGTRFAIREGGRTVGSG
                     VVSKIIA"
     gene            complement(17627..17701)
                     /locus_tag="RPW04_000265"
     tRNA            complement(17627..17701)
                     /locus_tag="RPW04_000265"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17667..17669),aa:Thr,seq:ggt)
     gene            complement(17840..17916)
                     /locus_tag="RPW04_000266"
     tRNA            complement(17840..17916)
                     /locus_tag="RPW04_000266"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17880..17882),aa:Gly,seq:tcc)
     gene            complement(17925..18009)
                     /locus_tag="RPW04_000267"
     tRNA            complement(17925..18009)
                     /locus_tag="RPW04_000267"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17973..17975),aa:Tyr,seq:gta)
     gene            complement(18066..18141)
                     /locus_tag="RPW04_000268"
     tRNA            complement(18066..18141)
                     /locus_tag="RPW04_000268"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18106..18108),aa:Thr,seq:tgt)
     gene            complement(18331..18879)
                     /locus_tag="RPW04_000269"
     CDS             complement(18331..18879)
                     /locus_tag="RPW04_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HDX6294390.1"
                     /translation="MSKISFISALLATALFGATHGEQSSPLNSFDPKSVDHIVIKMSA
                     LSANGDKSVGEVVAINTADGVAFFPRLSGLSAPGMHGFHVHTNPDCGSSDKGLGMKAG
                     GHWDPQNTGKHSFSWDNDGHKGDLPALYVDTNYPVLSTKIKNINELKGHSLMVHLGAD
                     NHSDSPKPLGGGGARLVCGVIN"
     gene            complement(19007..19097)
                     /locus_tag="RPW04_000270"
     tRNA            complement(19007..19097)
                     /locus_tag="RPW04_000270"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(19061..19063),aa:Ser,seq:gct)
     gene            complement(19155..19838)
                     /gene="pyrF"
                     /locus_tag="RPW04_000271"
     CDS             complement(19155..19838)
                     /gene="pyrF"
                     /locus_tag="RPW04_000271"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDX6294391.1"
                     /translation="MKLCVALDLANSDECLRVARELKGLDVWLKVGLRAYLRDGFKFI
                     NELKNVDNFKIFLDLKVHDIPNTMADACEVISQIGADMINIHASAGRVAMNSVMERLS
                     KLNNRPLVLAVSALTSFDEESFSEIYAAHIKESVVKFSKISYECGLDGIVCSVYESLD
                     IKNATSSNFLTLTPGIRPFGESNDDQKRVANLKTAMSNKSDFIVVGRPIYQSKNPREI
                     TEKILYNIT"
     gene            complement(19838..20233)
                     /gene="nusB"
                     /locus_tag="RPW04_000272"
     CDS             complement(19838..20233)
                     /gene="nusB"
                     /locus_tag="RPW04_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDX6294392.1"
                     /translation="MATRHQVRQSVVSLLYANEMGSEMEEFSNEFLEEKKIRNDQKSF
                     TLTLYNGVLDNLNLIDEALDAHLGKWKLGEIGAVERAILRLGAYEIKFTNTQSAIVIN
                     EAILLANELGSDSSTRFINGVLDAISKVN"
     gene            complement(20235..20705)
                     /locus_tag="RPW04_000273"
     CDS             complement(20235..20705)
                     /locus_tag="RPW04_000273"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDX6294393.1"
                     /translation="MNIIEGNLHLNGDEKVAIINGRFNHIITDRLVEGAKDAFLRHGG
                     KEENLDLILVPGAFEIPMALEKVLSSGKWDAVCCVGAVIRGSTPHFDYVSAETTKGIA
                     NVTLKYGKPVTFGVLTVDSIEQAIERAGSKAGNKGFEAMTSVVELLNLYKNIKA"
     gene            complement(20759..21079)
                     /locus_tag="RPW04_000274"
     CDS             complement(20759..21079)
                     /locus_tag="RPW04_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter"
                     /protein_id="HDX6294394.1"
                     /translation="MHLLALLLAGGCEVLGIVFLNKFSHSNGIRKIVNFMFIVATFGF
                     SLSLLRYAMQVLPMSVSYAIWTGIGAIGAVFVGVVFNHEKLGIKKCVYLFLIVFSVIM
                     LKLI"
     gene            complement(21079..21405)
                     /locus_tag="RPW04_000275"
     CDS             complement(21079..21405)
                     /locus_tag="RPW04_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin"
                     /protein_id="HDX6294395.1"
                     /translation="MSNKGLFFVIFGAIVEGGWAYGLKYADSNLEYLITIILICCSFF
                     SFMAAFKYLPASVAYTLFIGFGTLFIVGTEIISDYFRGSSIDFLRIVFIFTLIIGVLG
                     LKRSES"
     gene            complement(21410..22204)
                     /gene="kdsA"
                     /locus_tag="RPW04_000276"
     CDS             complement(21410..22204)
                     /gene="kdsA"
                     /locus_tag="RPW04_000276"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HDX6294396.1"
                     /translation="MVLIAGPCVIESRDLVFKVAEKLSKFNEMGWIDFYFKSSFDKAN
                     RTSISSFRGPGLEEGCKILSEVKKEFGFKILTDIHESYQATPVSQVADALQIPAFLCR
                     QTDLLVAAAKTKAMVNIKKGQFLSPDAMKYSVKKVLETRGINEFGYEIAKQNGVYLCE
                     RGSTFGYGNLVVDMRSLVIMKEFAPVIFDATHSVQMPSANGATSGGDSRFVPYLARAA
                     AAVGVDGFFYETHINPCDALCDGANMLTLEALEKNINDIKNIKEVL"
     gene            complement(22262..23152)
                     /locus_tag="RPW04_000277"
     CDS             complement(22262..23152)
                     /locus_tag="RPW04_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDX6294397.1"
                     /translation="MYNHFLMRHLGIYYMLVASICFAATGAFAKMLSSDMSSIEVVFF
                     RNLVGFILIIIALYKKPLHQKGGRPFLLIFRGVIGTLGLLAFFYNIANINLAAAFTFS
                     KTSPIFTALLAAFIFKEKLSSKGWFAIFIGFLGILFIIQPNLGVSKNDLIGLLSGIGA
                     ALAYTSIRELRKYYNTGVIVLSFMIFGTFIPLLCMILAEFYTVSYLDFMLAPFIMPDT
                     KGWIFIALMGICGTWFQIYMTKAYAASRKAGAVAAVSYSDVVFSMIFGLMLGDSFPNF
                     IVFCGIALIVLSGVLVAKEK"
     gene            23280..24671
                     /gene="der"
                     /locus_tag="RPW04_000278"
     CDS             23280..24671
                     /gene="der"
                     /locus_tag="RPW04_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDX6294398.1"
                     /translation="MKKIILVGRPNVGKSSLFNRLAKQRIAITSDVSGTTRDTNKAEI
                     FIDDKNCILIDSGGLDDSNELFKNVKINTLNEAKNADIIVFMVDGKNFPDEIDKRFFY
                     ELSNLNKPIALVVNKVDSKKDEERSWEFNEFGAKYIFNLSVSHNLGTDELRDWIYKLI
                     PKSKIKADTSDDFDEFLDCVNEHGEMGLPSVDYETKNIKIGIIGRVNVGKSSLLNALV
                     KEDRSVVSKIAGTTIDPVNESYVYEDRVFEFVDTAGIRKRGKIEGIERLALHRTEKIL
                     EEADIALLVLDASEPLTELDERIAGLGAKFELGLIIVLNKWDKDHGEFDKVVYELRDK
                     FKFLAYAPIISVSALGGKRVHKLYPLILEVYKNYTQKMKTSRLNEVLEEAIRTHPIPR
                     DHGKIVKIYYGVQFGFAPPKIALIMNKPRSLHFSYKRYLLNKLRENYELSGTPVILIP
                     KNRSQKESTENEN"
     gene            24661..25194
                     /locus_tag="RPW04_000279"
     CDS             24661..25194
                     /locus_tag="RPW04_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HDX6294399.1"
                     /translation="MKIDKNIVLIGFMGVGKGTIARALAEKLGVFAIDGDDMIESFAN
                     KKIKTIFEEDGEEAFRKIEKNLAKFLENSVKGAIISTGGGFYKVKNLKKIGTVIYLKS
                     SFEKIIERLKNSSNSEKKFAKRPLLSNLEEAKNIHASRDKEYEKKADFSILVEDKTAK
                     QITNQIVKLLNSQKAKG"
     gene            25198..26169
                     /gene="trpS"
                     /locus_tag="RPW04_000280"
     CDS             25198..26169
                     /gene="trpS"
                     /locus_tag="RPW04_000280"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012001231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDX6294400.1"
                     /translation="MRTLTGLQPSGKLHLGNYFASIKPMVDTQNLGNDDMFMFIANYH
                     AMTSVNEAKKLKESTFEAACAFLALGIDPNKSTFWVQSDVKDVLELYWILSQLTPMGL
                     VERAHAYKDKVAKGFEAHHGLFSYPVLMAADILLFNSNIVPVGKDQIQHVEIARDIAI
                     KFNNAHGDIFTIPEAGVQQNVATVPGIDGAKMSKSYGNTIDIFSDAKTLKKQCSSIVT
                     DSTALEAPKQWRNCNIFNIAKLFLNTEEQEALAARYEKGGEGYGHFKMYLNELVWNYF
                     AEAKEKFEYYLSHKNEVYDILDAGAKKANNVASQTMQKVRDAVGIYR"
     gene            26179..27423
                     /gene="serS"
                     /locus_tag="RPW04_000281"
     CDS             26179..27423
                     /gene="serS"
                     /locus_tag="RPW04_000281"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDX6294401.1"
                     /translation="MINLKLIETNFDEFNAKLKAKKVDEGVLKNLLDTYNELKIKKQE
                     LENLQAVQNAKSKEVGILARSGADTTLLKTELEENKKLMQTASNLVSELETKLDTVAS
                     RVPNVIDDDVPLGKDDNDNVCIKTILEPREFNFTPKEHFELGENLGWLDFATGAKLSG
                     SRFTVLRSDGARLSRALVNFMIDFNTARGFELVNVPFLVNSNTLYGTGQLPKFEEDLY
                     KIRDEDLYLIPTSEVPVTNIYNNEIIPVENLPIKMTCYSACFRQEAGSAGRDTRGMIR
                     QHQFEKVELVSISKPEDSAKILDEMVSCASDMLKELGLPHRHMMLCSADLGFGAAKTI
                     DLEVWLPGQGKYREISSISNTRDFQARRAKIRYKDGKKNALVHTLNGSSLAVGRTLIA
                     IMENYQNSDGSINIPEVLKKYM"
     gene            27433..29763
                     /locus_tag="RPW04_000282"
     CDS             27433..29763
                     /locus_tag="RPW04_000282"
                     /inference="COORDINATES: protein motif:HMM:NF024824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDX6294402.1"
                     /translation="MADEQNEVQKEEIVILEKDDGDITPLEDLDKKEEQVETPKLQKK
                     PKKNIFIIAAASGAIALILLIAIILLLKKDETKEQPTKNLEQPKQTQVITQKFSPSKI
                     DDMLKKANSLYESGNKFEALKIYENVAIYNEALSNYNLGVSQMNQSKFEDAISSFKKA
                     IENNENTSVSALNAAVSALEINNEPLFKYYIELANAFLSKESDSSLYDYYNALINYYK
                     GYYIEALHILDSSKNRYYEGQKNYLRSKILSYIYQDKQSIKALENTNTFDTNIPMGLL
                     YARLGEYDLARKYLNKALVDENNADSTKLALALIDIKTGQFGSAALNLKDINDKNSTF
                     ISETYPIKTILNPELFDINMAQKKFSVDMLFSKDNIYQILFYFTPYKVFDAKQTINYI
                     RKGGISVFIDENTQADEYLKTSGAISKVNLNLSKTIATALNYNLREANKEFLNIIKIY
                     SGHSILHYNLALTYAQLGNFSEAYRHFITSYHLDSTNYLAGVYAVMTSSMIGKDNKKL
                     ISEILDNLNEDSNLNQENIYDSMVQLVLGNNGVLQRWLDTDNSTNILNIVFDIIAAQI
                     TGRKDIIISKTDKLKEILPNDIMANILYSTARFTDNNIKDYARDIQHGFFNNNVNKKA
                     LYGGANIIRIQYIKLLQIAGLLNVERDRIKSDLEISTQNAQNILQTLAYIDLFTANFE
                     ESYSIYNELIDNKNVNDPNTLFLASVASIGARHPESAIGYLELSKLVDPTSIEDRLAL
                     GMLYQEVGNIDAAISQYENIGNTSYKSEFFTFELVN"
     gene            complement(29777..31297)
                     /locus_tag="RPW04_000283"
     CDS             complement(29777..31297)
                     /locus_tag="RPW04_000283"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDX6294403.1"
                     /translation="MDNNKIIVFDTTLRDGEQSPGASMNTEEKIQIALQLERLGVDVM
                     EAGFAAASPGDFDAINQIAKQIHSIRIASLARALEKDIKAAGEAISPAKNRRIHTFIA
                     TSPIHMEHKLKMTPDEVIKRAVEAVKYAKTFVDDVEFSCEDAGRSDIVFLKEICAAVV
                     EAGARTLNLPDTVGFRMPDEIYNMVKSMVDFIGDRAIISVHNHNDLGLAVANTLASIK
                     AGARQVECTINGLGERAGNAALEEIVMTIRTRSDEFAPLYTDIVTKEIYATSRLVASI
                     TGIEPQPNKAIVGKNAFAHESGIHQDGMLKCAQTYEIIKAEDIGAEKNSLVLGKHSGR
                     HAFKDKLINLGFDLDDNEINEAFIKFKELCDKKKEIFDDDIRALVSHEIIKIPEIYSI
                     QTLSTSSCNAGHSSAAVSIKFSDNIISDAALGNGTADAIFKVIDRISGISGELKDYKV
                     NAVSQGKDALAKITVKVVFEGSSCATIGHGLDIDTMMASAKAYVSALNSYLSMKNR"
     gene            complement(31460..32194)
                     /gene="pssA"
                     /locus_tag="RPW04_000284"
     CDS             complement(31460..32194)
                     /gene="pssA"
                     /locus_tag="RPW04_000284"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HDX6294404.1"
                     /translation="MENKPKLIYILPNLFTAGSAFLGIISILASANGEYMKAIIYIVL
                     SLILDGLDGRVARLTKTTSKFGVEFDSLADLVAFGVAPALLFYFSIGYNFGRFGALLT
                     AMFVVFGAIRLARFNVMSGTCEPNVFIGLPIPSAAIVSAFWVGIYNNYDFMHGFEPIF
                     IVIMAGLSVLMVSNVRYPSFKKVDFKRANYLKTLVYLVIIFSMLYLCPLESATILITI
                     YTIYGIIRAIWARFFAKNIKLTKENR"
     gene            complement(32199..32816)
                     /locus_tag="RPW04_000285"
     CDS             complement(32199..32816)
                     /locus_tag="RPW04_000285"
                     /inference="COORDINATES: protein motif:HMM:NF014696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDX6294405.1"
                     /translation="MDNLRVISKYGYCSIGLFGVIFLLSLLFDTFIFLSAILLIFVVF
                     IYRNPERLPNVESMDAILSPIDGVIEDIRKSSYNGVLYTEVVIKNSIFDSGVLRAVAN
                     LKVDEIKSKNGLNLATTSLDKNLLNNRIAYICSVGDKQVIIRINSGAMSRKIHLEKTK
                     ELKAGRRFGFILDGRVSLFLPLTTKLNVSVGNRVKAADLIGFLEE"
     gene            complement(32819..34750)
                     /gene="ftsH"
                     /locus_tag="RPW04_000286"
     CDS             complement(32819..34750)
                     /gene="ftsH"
                     /locus_tag="RPW04_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDX6294406.1"
                     /translation="MENNENKNGQNNNNGNFFNKNPIMVFAIFAIIIVVVFRSFNPDG
                     MNEFGDSTSSKNITYSELKQLIKSKQINNVVIGQTTIKATGNGVTYVAKKVNDQTLVP
                     LLESEGVSYGAYNETNWLSDMLFSWVIPIFIFFGIWMFLASRMQKNMGGGILGMGSSK
                     KLVNSERPKVKFNDVAGVEEAKEEVKEIVDFLKNPDRYIRLGAKIPKGVLLVGPPGTG
                     KTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDA
                     IGKSRAAGAMMGGNDEREQTLNQLLAEMDGFDSDKSPVIVLAATNRPEVLDAALLRPG
                     RFDRQVLVDKPDFKGRVDILKVHSKEVKLANNVNMDDIGRLTAGLAGADLANIINEAA
                     LLAGRASKEYIEQQDLIEAVERAIAGLEKKSRRINPKEKKIVTYHECGHALIAETTKG
                     ADKVTKVSVIPRGIAALGYTLNAPEENKFLMQKHELIAKVDVLLGGRAAEHVFIKEIS
                     TGASNDLERATDIIKAMVSMYGMTDVAGLMVLEKQRNVFLNGGQTLKDYSDDMAHKLD
                     EYVKNFLNERFNAVVATLELYRGAIEKMVDSLYEEETIEGSKVREIIRSYEEENNIPS
                     RLIVEEDGNSDIKKAKDKE"
     gene            complement(34740..35567)
                     /locus_tag="RPW04_000287"
     CDS             complement(34740..35567)
                     /locus_tag="RPW04_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDX6294407.1"
                     /translation="MKEKFFELKVLSRKSDVLKEFAFELGATCIEEIENGFILRDEDD
                     LSNISWGLEEFAGRIGSDISTSLEIKDNIDWINEYKKGIKPVSSGKFYIRPSWEEQKD
                     GFIDIIIDPALAFGSGHHESTSSCLNLISKYINLKECKIALDVGCGSGILSIALAKLG
                     LAVDACDTDEQAVLSSTDNARKNGIKFNNIWTGSITDANGRYDVVVANIISDVILLLS
                     KDLKMHVNNNGYLILSGILTKYKDRILQAFGDLELVWNITQNEWESFIFKNKDKNGK"
     gene            complement(35567..35932)
                     /locus_tag="RPW04_000288"
     CDS             complement(35567..35932)
                     /locus_tag="RPW04_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator CheY"
                     /protein_id="HDX6294408.1"
                     /translation="MKLLVVDDSSTMRRIIKNTLQRLGHKDILEAEHGLEAWGLLEQN
                     PDIGVLITDWNMPEMNGLELVKKVRAEQKYENMPIIMVTTEGGKAEVITALKAGVNNY
                     IVKPFTPQVLKEKLEDVLN"
     gene            complement(35998..36708)
                     /gene="hisA"
                     /locus_tag="RPW04_000289"
     CDS             complement(35998..36708)
                     /gene="hisA"
                     /locus_tag="RPW04_000289"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDX6294409.1"
                     /translation="MEIIPAIDLKQSKAVRLTKGDMQTAKIYSDKPWELAKEFEDLGA
                     KWLHIVDLDGAFAGDAINLKTIEKIVSTTNLQVEVGGGIRTKERIKSYLNSGVSRIIL
                     GSIALKNPEFVKEVAKKYRVVVGIDAIDGFVAIEGWANVSKMQASNLAKLYADAGVEA
                     IIATDISRDGMLNGVNVEFSASIAKASGIDTIASGGVKDINDIKCLKLNGNIAGVIVG
                     KAYYEGKLDLKEAFKSNF"
     gene            complement(36708..37319)
                     /gene="hisH"
                     /locus_tag="RPW04_000290"
     CDS             complement(36708..37319)
                     /gene="hisH"
                     /locus_tag="RPW04_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDX6294410.1"
                     /translation="MIGIIDYGAGNIKSVKNAFEYIGSKSELISFGDNLKKYDKLILP
                     GVGAYGVAMQKLRANGLEDGILEFIKSGKPFLGICLGMQLLFERGFEFGEHKGLGVIK
                     GDVIKFDESKFNKHLKVPHIGWNSCEFKKECSINRGLPKSSYLYFVHSYHAVCDDESV
                     LAVTTYGYEFVSAVCKDNVFGFQPHPEKSHENGLKIIKNFVEL"
     gene            complement(37303..38208)
                     /locus_tag="RPW04_000291"
     CDS             complement(37303..38208)
                     /locus_tag="RPW04_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HDX6294411.1"
                     /translation="MLIKEIQEFSDIRYKARAYLCYLFDRNIPNNLPGVNLSLVKDGF
                     DKIAHEIEYFEAFYILDKNGVQIENNISLDSKKMIGKGDNRSNKAYYYRAVREKRCVL
                     TDPYPSSLTNGLCVTASMPVYDDKDELKYIACMDISLVDILKLVHPSSVDGLFGKFSK
                     LVYSIFSLALFIVAVVLFIHGIKGFVLKSFHDINISEVFESTIVLTLALAIFDLVKAI
                     FEAEVLGRSNHDNNGGSKTMVRFIGSIIIALAIESLMLVFKFAITNPSGVVYAIYLIG
                     GVAMLMVALSLYLWVLKRSSFDRDY"
     gene            complement(38210..39997)
                     /gene="pglF"
                     /locus_tag="RPW04_000292"
     CDS             complement(38210..39997)
                     /gene="pglF"
                     /locus_tag="RPW04_000292"
                     /EC_number="4.2.1.135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_081867149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (configuration-retaining)"
                     /protein_id="HDX6294412.1"
                     /translation="MILRATKNRRTIFFLIFDTIIFCLSIYFAFLLRFSGEIPEIFER
                     GMIYGGIILVSSKLVLMWIFRLYKVPWRFFGLNEARKIFLVTILSAGIFYTIFISYDE
                     FFNPFPRSVIIIDAILSALMVGSLRIVKRIFLDFKKSHNGEPCVIIGSTSKTLQVLKG
                     LKSGYADYYATGIVDGRSDVVGTYCDGFLVGNKSELKNYVEDGVKTAIIALKLRPNEL
                     KELYDELDEIGFKDIKIFSLLDGKKEGITDISIEDLLARKPKDLDSKVVEKFIGGKVV
                     MVTGAGGTIGSEICKQCLKYGCKNLIMVEHSEYNLYQINEATKSDMRNKLVMLNIMHL
                     KEFEEIFAKFKPDIVIHAAAYKHVPLCEFNPISAVQNNILGTKNVVDLSKKYGTKRVV
                     LISTDKAVRPTNIMGTTKRVCELYALNSNESGKTEIVAVRFGNVLGSSGSVIPKFKAQ
                     IAANEPLSVTHPDITRYFMLVSEACQLVLQAASIADGGELFVLNMGEPVKIADLAARM
                     LKLSGKEELGIKFVGLRPGEKLYEELLIDPNDAATKFESIFVTKSGEYDLNLLNSQIN
                     KLINLEDETLIETELKNIVPEFHHSLNKD"
     gene            complement(39994..41088)
                     /gene="pglE"
                     /locus_tag="RPW04_000293"
     CDS             complement(39994..41088)
                     /gene="pglE"
                     /locus_tag="RPW04_000293"
                     /EC_number="2.6.1.34"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_065843131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine transaminase"
                     /protein_id="HDX6294413.1"
                     /translation="MARVFLSPPFMGGNEEKYVKEVFKSNYIAPLGEYVNKFEDSIKN
                     YSGAKSALALNSGTAGLHLALRVIGVKDADVVLASSFTFAASVNPIMYERCIPMFIDC
                     DESWNLSPKLLKEAIKNAPKKPKALIVTHLYGQAAKMNEILEICKNEDIKVIEDAAEA
                     LGGFYEDKALGTLGDIGVYSFNGNKIITTSGGGMLISNDENLVAKARYLSTQAREPLL
                     HYEHLDYGYNYRLSNVLGAIGFGQMEVLASRVKRKREIFEIYKNLLEDCCEFMPEVAN
                     SRGNRWLTTLLFKEKNAHLKVIEALNKNDIESRPLWKPMHMQPVFKDTLRVVDGTSEN
                     YFNRGICLPSGADMSDDMIGKVAGIVRKSL"
BASE COUNT        13089 a         8406 c         6132 g        13608 t
ORIGIN      
        1 aaaatttatt atcaaactta gcctaaaaat aggtcttggc taccaacgac aatatgaata
       61 aatactctac taacaggagc ttacacagta caactcttgg tagctatgac gcttattaga
      121 aattttatat gaaaatctag cagctggaaa tgtgctattt taatcttgtt atggtatatt
      181 tgccctgctt gagtgctcgt atttatagca tatagggcta tattactttt gaaactataa
      241 taagtgatat taaacttgct ctataaattt gtccaaaata aaagaagaag cgaataaaac
      301 tccaagctat gtttaccgac aactgaagaa aaattaaaat ttagcaaatt tagtactatt
      361 ttgatactat aagatatgaa caaagcaaaa agctatgaag tttatacaac gaagcggtcc
      421 taaataaaag cttgaatatc caagactcac taggatatat atcaagtata aattccctaa
      481 ctcccatcca agagctgata agaatcaatc aaaatagaca taaaatcagt ccaaatttgc
      541 taccaaacat tgatggaaaa aaacgatcaa aacagcatta aaaacatata tataggcaaa
      601 acatctagcc gtggcggagt atttgccaag atcaaagtca atgctcaacc tgtcaattcg
      661 tgcttaacaa cgatagctag actaccgtgt aaatcatgca aaaacaaagc cgaaaaaacc
      721 gtaagcaaca aaatcgtacc tatatgaaat agccatattt aaataccctt tttctcatcc
      781 acgatgtatt aagcccacgt tttgttttgc tgatcacagc cagcatacag acaaaaataa
      841 aaaactatcc gctgcagaaa aatacaaaac actcatagat atactttgag acaggttagc
      901 ccaaataaaa tgatctatga acatatgcat caaaagaagt catctaatag aatcaagaac
      961 caatatacga tttgaatgcc gtgtcaaata aagtcctaat aataaaaatt gaatagaatg
     1021 gtgtccccag cgagattcga actcacggcc tcagaattag gaattctgcg ctctatcctg
     1081 ctgagctatg aggacaaaag taaaactgtg gaaaaaccgc ctaaaaacta ggcggtttag
     1141 gattaaattt agccgtttct tttcttgatt atttcttcag aaacattttt tggaacttct
     1201 tcatagtgat caaattccat agaataagta gcacgacctt gtgtttggct tcttaaatct
     1261 gttgaatatc caaacatctc ggcaagtgga caaaaagccg taactatttt atttccagct
     1321 ctttcatcca tagagttgat ctgtccgcgg cgtttgttaa gatcgccgat aacatcgccc
     1381 atgtactcct ctggagtttc aacttcaact ttcatcatag gctcaagtat aacagcgccg
     1441 gcttttctag caccttcttt gaagcccatt gaagcagcta atttaaacgc catttcagat
     1501 gagtcgactt cgtggtagct accatcaaac agtgtaactt taacatcttc aacaggatat
     1561 cctgctaaaa caccgctttg aagtgcctct tgacaacctt tttcgactgc tggtatatac
     1621 tctctaggaa caacaccgcc tttgatatca ttaacaaatt caaatccgct gcccggctca
     1681 agtggctcaa gacgtaagaa tacgtgaccg tattgtccgc gaccacctga ttgttttgcg
     1741 tatttatact cttgctcaac tgatttttta atagtctcgc ggtaagcaac ttgcggttgt
     1801 cctacctcag cctctacttt aaattctcta agcatacgat cgacgatgat ctcaaggtga
     1861 agctcaccca taccagagat aatagtttga ccactctctt catccgtgct aactctaaaa
     1921 gacggatctt cttgagctag tttttgaaga gctataccca ttttctcttg atcagcttta
     1981 gtttttggct caaccgcaac gctgataacc ggatctggga aatccatttt ttcaagaatt
     2041 acatgctctt tttcacctgc taaagtatca cctgtcaaag tatcttttag acctacgaca
     2101 gcgcctattt ctccggcgta aagaactttt atctcttctc ttttgtttga gtgcattcta
     2161 agaagtcttc caatacgctc ttttttacct tttacggtat tataagcata acttccgctc
     2221 tcaagttgtc cacgataaac tctaacgaaa gttagctgcc caacaaatgg atcggtcatg
     2281 atcttaaacg caagccctgc aaactcacca ttatccgtac tatctactac gacttcgctt
     2341 ccatcttcga gttcgcctct tatggcagca acttcgtccg gagcaggtag ataatcaaca
     2401 acggcattaa gaagcggttg aacaccttta tttttaaatg cggtaccgca aagcataggt
     2461 atcatagtca tggcaagaca tccggctttt atacctcttt tgatctcttc tacacttagt
     2521 tcttcaccgc cgaaaaattt ctccataaga gcgtcatcgg tttcagctac cgcttcaatc
     2581 atttttgctc tatactcttg cgctttttct aatagttccg caggaatatc ttttgttaca
     2641 taatcagtcg gttttgtatc atcttcccaa actaaagctt tcatttcgat tagatcgatt
     2701 acgcctttaa actcatcttc ggcaccaatt ggaatttgaa taggcaccgg atttgctttt
     2761 agcctgtttt tgatttgttc ttcaacatta aagaaatttg cgccaactct gtccattttg
     2821 tttacaaata ccattcttgg aacgcggtat ttgtttgctt gtctccaaac tgtttcactt
     2881 tgcggttgaa cacctccaac agcgcaaaat acggctactg cgccatcaag aacacgcata
     2941 gaacgctcaa cttcaatagt aaagtcgacg tgtcctgggg tgtctataag gttgatttga
     3001 tgatctttcc aaaagcaagt tgtagcagca gaagtaatcg taatgccacg ctctttttct
     3061 tgctccatcc agtccatagt cgcagcgcca tcatgaacct caccgatctt atgactcata
     3121 ccggtgaaga aaagaattct ttcactagta gtagttttac cagcatcgat atgggctgca
     3181 atacctatgt ttcttaccat atttaatggg gtttttcttg acatagacgc tccttattac
     3241 cagcgataat gagcaaatgc tttatttgcc tcagccattt tgtaagtatc ttctttcttc
     3301 ttaaatgatg cgcccttact gtttgctgca tcaagtagct ctgctgctag tttttccatc
     3361 atagttcttt cgcttctttt tctagcaaag cttatgatcc aacggatagc tagagcttgt
     3421 tggcgtgctg gacgaacttc tacaggtact tgatatgtag caccgccgac acggcgtgat
     3481 ttaacttcca tgatcggttt tacgttatca atagcgtcat taaaaacatt tatacctttt
     3541 agatcaccgc cttttgcatc gatagtttta agtgcgccgt acattatctc tgtagcaacg
     3601 ctttttttac catcatacat aagtgaatta ataaatttag ttattatttt attgccataa
     3661 atcggatcag gcattacttc cctaacaggg gcttttcttc ttctcataac tttccttcaa
     3721 atttaaattt tactcaaact taactaaaac aacgagttag tctgtacgaa tttttatttt
     3781 ttagcatctt tagggcgttt agcaccgtat ttagatctag aaacagttct ttttgcaaca
     3841 ccagcagtat caagagcacc acgtacgata tgatacttaa cacccggtaa gtcttttacc
     3901 ctaccgccac gaactagtac tatgctgtgt tcttgtaggt tgtgaccctc accgcctata
     3961 tagctgatca cttcaaatcc gcttgttagc cttactttgg caacttttct caaagccgag
     4021 tttggtttct taggagtcgt tgtataaact ctagtacaaa ctccccttct ttgaggacac
     4081 tcttttaacg ctggcgattt tgatttaact atcacttttt tgcgttcttt tctgaccaat
     4141 tgattaatgg ttggcacaat aattcctttc aactaaattt attaaaaaga gcttatttta
     4201 ctaaaaaatt acttaatatt atatgaattt gaatttgtct atgaataaag cagcatttga
     4261 agcaacaaag catagataca gcaaaatgtt gcatctatgc tttttaaatt taaaacgata
     4321 ttgtttgata aaaaagctta atcttcgttt attttaatct taactttttt atcttgataa
     4381 agaccggtac caactggtat catacgacct aaaataacgt tctcttttag atcttcaaga
     4441 tagtcgaatt tagcagcgat acttgcttct gttaaaacct ttgtagtctc ttggaaagaa
     4501 gctgctgaga taacactatc gcttcctata gcagctcttg ttacaccaag aagtactggc
     4561 tcggcaattg ctggctcgcc acctattttc attatacgat cattttcttc tctaaattta
     4621 cgtctactta ccatatcgcc tacgataaaa tttgtgtgac cgctatctac tatttttact
     4681 tgacgcagca tttgagatac gataatctct atatgtttat cacttatagc aacgccttgt
     4741 gagcgataaa cttgttgaat ttcacttatc aagtaatagt gcaatgcttt ttcacctaat
     4801 atccttaata cgtcatggct gctaactaaa ccgtcggtta atttttctcc agcatgcaca
     4861 aactcaccat ctcttacttg aatttggcga gatttatcta taagatactc tgcgcttgag
     4921 ccatcttcag ccattattat tatacgttct tttgagcgaa gaggcttatc aaatttgata
     4981 gtaccatcaa tctctgcaat aatagctgta tttttaggac gccttgcttc aaacaattct
     5041 gaaaccctag gaagacctcc tgtgatatct tttgattttg caactgcttt tggagtttta
     5101 gctatagtat cggctctaga aacctctgct ccatctttta caaatatagc agtcttaggc
     5161 tccaactgat aacgaataag ttttccgctt ttagttgata taactatagt tggcttaact
     5221 ccgcttggta gatattcgtt tataacaagc ctactttctc cggttgcttc atcatactgc
     5281 tcggctacgc tatatccagg ctctatatct tcataagcga ctgtaccggc ttcttctgct
     5341 ataacaggag ttgagtacgg atcccactcg gcaattacaa gtttactgcc atcttgcggt
     5401 tttgctatag tatcttttgc gcttactata tcgctatcat taaatttaat aacgctattt
     5461 cttggtatat agtgacgaac agcttctcta tcgtcatcat cggcgataac aacaaataat
     5521 cctttttcgc taaccatatc gccttttttg acgtttttaa ttctctctag atagtcgcct
     5581 tttaatatat aaaacttaag tacgccgttt gctccagata atatatcttg agtaacagga
     5641 tcgccatcag ctacttttac ttcactagca aaaggaatac ggtttggcac attccaaccc
     5701 tcttttataa cctcgactat actctcgttt tccttgactt tatcaccttt tatataaggt
     5761 atgtagaact taccttcaac tttaccgctt actccggcta actcattcgg tttggctaaa
     5821 tcgtgttttc ttaaaacata cttaacctca tcgcttttgc cttttataat aacatttata
     5881 tcttcgtgtg ccacttctat atttatctct ccgtcaaacg gagcttttat cttcggctca
     5941 actaataata tagctgcatt acgacgattt gttactataa atttattgtt attctcatat
     6001 gttttaagat tataatatct aataaatccc tctttttgag ccactacttg acgatcttgt
     6061 tgctccgttg aagcagtacc gccaatgtgg aatgttctta gagtaagctg agtaccaggt
     6121 tcgccgattg attgagctga gatgatgccc acggcctctc ctggttttac caatttaccc
     6181 tcgccaaggt ttataccata acattttgag catacgccct tacttgcttt acaagttata
     6241 ggagttctta tgcttactga ttttatacca gcgtcagtga tagttctagc ttttacttca
     6301 tctataagag taccttcggt aaataagatt tcattagtaa taggatcaat tacgtcatca
     6361 cttaaaactc tacctaatac tctttcttct aagctttcga taagctctcc gttttcagta
     6421 atctctgtta tctcaacacc ttcgtgagta ccgcaatcat ccatagtaac ttttacgttt
     6481 tgagcaacat cgataagctt tcttgtaaga tatccggcat ttgcggtttt aagtgcagta
     6541 tctgcaagac cttttctagc accgtgagtt gagatgaaat actcgagcac gtttagtccc
     6601 tcacggaaat ttgatgtgat aggagtctca atgatcgaac catcaggttt tgccataagt
     6661 ccacgcatac cagcaagctg acgaatttga gctgcacttc cccttgctcc cgagtctgcc
     6721 atcatataaa tagagttaaa tccactttta tctgttttga taagtttcat catttcagct
     6781 gcaactttat tgttagtatc tgtccagata tcaactattt tgttgtatct ttctgaatca
     6841 gttagtaaac ctgagccgta ttgattttga atttctctaa ctcttttctt tgcttcatct
     6901 acataactat atttactctc aggtatgata atatcagcta tagatatact tatccctgct
     6961 tttgtagcgt atctaaatcc tagattttta agcttatcta aaaacccggc tgttacttca
     7021 agaccgccat ttttataaac ataatcaacc aaattagcaa tatccttttt cttcataact
     7081 ttattccaca tagattctgg aacagagttt tcttttaaat ttggcagtat tgattttata
     7141 ataagacgac ccgcagttgt aaatacagtg cgtccttcta ccatagtttt tatctttgcg
     7201 tgcaagtcaa gatagtgagc ttcaacagct atcattacct catcgacact agcaaaaatt
     7261 ttattagctc caacggcttc atttttttca agacttaaat aataaattcc caaaaccata
     7321 tcttgagaag gtaccgttac agcttttccg ctcgcaggaa gtaagatatt catcgaactt
     7381 aacataagaa ttttacactc tgcaatagcc tcttgagaaa gtggtacatg cacagccatt
     7441 tggtcgccat caaagtctgc attgaacgcc gaacaaacaa gaggatgaag ctgaatagct
     7501 ttaccttcta ttaaaaccgg atgaaacgcc tgaatagaca ttttatgtaa agtaggagca
     7561 cggtttaaca taacgggatg atctgcaact acctcttcaa ggcactccca aacttcattt
     7621 gttttatctt cgatcatctt tttagcttgt ttaacagtag tagcatatcc cttttcttca
     7681 aggcgagcca acaaatgagg tttaaatagc tcaagtgcca tttttttagg aagcccacat
     7741 tgatccattc taagctttgg ccctacaact ataactgaac gtcctgaaaa atccacacgt
     7801 ttaccaagca gattttgacg gaaacgaccc tgtttacctt ttataatttc acttagagat
     7861 tttaacggtc ttttatttgc accttttact gcatttgcac gcctaccatt atcaaacaga
     7921 gcatcaactg cttcttgaag cattcttttt tcattacgaa taataatttc tggcgcgtca
     7981 agttccatta gtctttttaa acgagtattt ctatttataa ctctacgata cagatcattt
     8041 acatctgaaa ctgcaaattt accaccatca agactgacaa gaggtcttaa atcaggtggt
     8101 aaaacaggca agtttgttat catcatccat tcaggacgat tacctgaatt taaaaaactc
     8161 tcaacaactt ttaaacgttt tactatagtt tttttctttg cttcgctatt tgtactttct
     8221 atctcgatct ttaactgatc aagtatagat actaaatcta aacttgcgag tagatcacgt
     8281 ataacttcgc cgcccattct agctttaaaa ccactttcac taaatttctg ctcaagtaat
     8341 acgtactgct cttcatttaa aacatcataa agatctactt ttttactatt ttcattgtca
     8401 taaaatgcat cgcccggatt ttctactata taagcttcat agtaaagaac acgttctaaa
     8461 tccttcattt ttatgccaag aaaagtgcct atacgactag gaagcgaatt tacataccaa
     8521 atatgtgcta caggagtaac aagctcaatg tgccccatgc gtgagcgacg aaccttcgaa
     8581 gtagttactt caacgccgca cttttcacat ttaattcctt tatagcgcat ctttttatac
     8641 ttaccgcaca gacattcata atcccttata ggtccaaata tcttagcaca aaatagaccg
     8701 tcgcgctccg gttttaacgt gcgataatta atggtttcag gctttttaac ttcaccgtga
     8761 ctccacgctt ttatacgatc tggactagcg agtcttagct gaaaggcttc aaaatccctt
     8821 ggttttgcat cttcttttat ctcaataggt tttaactcac tcattattct cttcctcatc
     8881 atagatctca acatcaagtg ctagagattt tagctcattt gttaaaacaa aaaacgtttc
     8941 tggaatacca gtacttggta cattttctcc tctagtaagt gctttataag cagctaaacg
     9001 accctctacg tcatcagatt ttacagtcag catttctctt aaagtatgag ctgcgccata
     9061 agcctcaagt gcccaaactt ccatttctcc aaatctttga ccaccgctta gagctttacc
     9121 accaactggt tgttgtgtta ctaaagagta tggtccggta cttcttgcat gaactttttc
     9181 atcaactaag tggtgaagtt ttaacatata catacatcca acattaacac gctcagccat
     9241 ctttgatccg gtacgtccgt cataaagttc ggttttacca tccatatcta tttttgccat
     9301 ctcaaataac tttttaaatt catcagcttt aacaccttca aaaataggag tagcaaatct
     9361 aaccccgcta gcccagtccc tagcataatc tatgagctta tcatcatcaa ttttgcttaa
     9421 aatagcttta gcatccataa gacgagatac atctgctatc tcagtcattt ttgctcttag
     9481 ctcttttatc cattcggctt ttttattttc aaagatttct tcaatctgct ctcctaattt
     9541 cataccaact aaacctaggt ggctttctaa aatttgacct atattcatac gacttggaac
     9601 gcctaatgga tttaaaacta tatctaccgt acgtccattt ggaagatacg gcatatcaac
     9661 atccggaact atatttgata caataccttt attgccatga cgtcctgcca tcttatcgcc
     9721 tacttttaat tttctttttg tagctaaata tactttaact aacttaacta caccgcttgg
     9781 caatatatca tctttttcta aaatttcaag tttagcgtca tgctcgtctt ttaatttctt
     9841 cttctcattt tgaaaataag ctttcatatc ttcatatgtt ttttgaattt cttttgaaaa
     9901 gcactttaca taggtgttaa gagtaaatct atttacatta tcaagatctg atctttttat
     9961 cttatcacct tttttatagc tatttttacc gatctctagc tcactctcaa gaggattttt
    10021 agataataaa gcagtaactc ttaacatctc ttcacgatca agcattaaaa gtctgtcatg
    10081 atgttctttt tctaaaatat tcttttcatc ctcatatgct ttaaatgatc tagcgtcttt
    10141 ttcatagcct ttttttgtaa atatcttaac atctataacc acaccttcaa gactagctcc
    10201 ggcatacaaa gatttattta caacgtgacc tgctttttca ccaaatattg ctctaagaag
    10261 tctctcttcg ggagtcggct ttacctctcc ttttggtgaa actttaccca ccaaaatcat
    10321 tcctggtttg atatgagtgc ctatttttac tataccgctc tcatctaggt gcataagatc
    10381 ttcttctttc atatttggaa tatctctagt tatctcttct acaccgtctt ttagctctct
    10441 tgcttctatc tctttttcat atatatgaac gctagtaaat gcgtctgcgc gtatcattct
    10501 ctcactcata acaatagcat cttcataatt ataaccattc caaggcataa atgctataag
    10561 agcattttta cctatggcta actcgccctt ttccatactc gagccatcag ctattatctg
    10621 tcctgatttt accatattgc cttttttaac tataggatgt tggctaaaag ttgtattttg
    10681 gttagttctt aaattttttt ccatagtata ttgatcaata tatggaccgt tttcatcttc
    10741 accaagaata aatatgtttc tattatcaac tttttctata acgccaccac gtttagcttt
    10801 tatagcctcc cacgcgtctc ttgcaactat agcttccata ccggttccta ctataggtgc
    10861 tgtagatcta agaagaggaa ctgcttgacg ctgcatgttt gaacccataa gtgcacggtt
    10921 tgcatcatca tgctctaaaa acggtatcaa agaagcggca acgcccataa ccataccact
    10981 acaaagatct atcaatgtta cgtcttctct ttttgcaaga agcatttctc catctcgcct
    11041 tacttctata agatcttctt ttataatatc gtttgcatct aatacagttg aagctggagc
    11101 tataatatga ccctcttctt gagtagctgt taaataaaca atctcatttg tgactttacc
    11161 gtctattact cttctataag gtgattcaac aaatcctaga tcatttactt ttgcatatgt
    11221 agaaagagtg ttgataagac cgatattttg accttctgga gtctcaacag ggcaaattct
    11281 accataatga gtcggatgca cgtcacgtac ttcaaatccg gcacgctctt ttactaaacc
    11341 gccttcgcca agagccgaca aacgacgttt atgcgtaact tcgctaagag gatttgtttg
    11401 atccataaat tggctgagct gaccgcctgt aaaaaattcc ataatagtcg tagttatcat
    11461 tttaggattt actagatcat aaggcataag ctcatctacg ttattactaa gacttgtaaa
    11521 tttatctcta atagcttttt gcattttcac aaatcccaaa tgaagctcat ttgctaaaag
    11581 ctcgcctatt gatctgatac gacggttacc taagtgatct ctatcatcta tataaccttg
    11641 tccgtttttt acttttatca gatatttagc agtttttata atatcttcat ttgtaagtac
    11701 agtaacatac tcaggaacgc taagacctaa tttatgattc attttcatac gacctacttt
    11761 tgtaagatca tatctttctg ggttaaaaaa tagatcattt acaaacgttc ttgcagcttc
    11821 tttaactaca ggctctcctg ggcgcataac tttataaatt ctaatagcag ccaggtcatt
    11881 ttcatcttct aagccttcag tttgcttaag taattttagc gtttcataat cttgtaaaaa
    11941 tgagttaata atagcatcat caacaccgct tgcaagatca tttgctattt ctatactatt
    12001 ttgttcagct actatttttg ctaatttatt ttcatctagc tgagttaaag tatcataaat
    12061 aacttcgccg ctctctttat cgataactgg actagccaaa tatctattta ccaaaacttc
    12121 tatcgggtac tctacaaatt tgagtccatc ttcaataagc ttatctgctt ttttctttgt
    12181 aagtctcttt cctgcttgat gtaaaatatt tccatcttca tcttttatat cataatcaac
    12241 tcttccagaa aaatcatccg gattaaacat ggttaaaaat ttattatttt ttatatttaa
    12301 tgtttggata gggtaaaata actttactat atcttgtttt ttatatccaa gcgctctaaa
    12361 aagaatcgtt ataggaactt ttcttctttt atttatacgc acatataaaa catcttttgt
    12421 gtcatattcg aaatagagcc agctaccgcg atctggtata atttgtgctg tatatattag
    12481 tttatttact acagttggac tctcttcttc tttaaatata acacctgggc ttctatgaag
    12541 ctgatttact acgactcttt ctacgccgtt tattataaat gaaattctat cagtcataag
    12601 aggaatttca cgtacaaaaa tttcttgttc ttttatatct ttgacaccga ctttttcact
    12661 tgttttttca tctctgtcat gtacaatcag tctaatttta atttttaaat ttacgcaata
    12721 cgtaagtcct ctttccatac actctctaac tgtatatctt ggcttactta tttcgctgct
    12781 gacatactct aatgtaagtc tattttgagg atcatgtatt gggaatatcg acttaaatac
    12841 tttttcaatt ccgctttcgg tttgtgaatt atcaagattt aaaaaatgat caaaactctt
    12901 tttttgcaat tgtaataaat ttggaacatc aatctctttt gcaacatttg aaaaatcaac
    12961 tctgagacga tttccagaat ataggctatt tagcatttga ctacctcatg gaatagtttg
    13021 aaagaaaata aaccacaatg acgtggtata agcaatttta ggagcaagaa ctcttgctcc
    13081 tccaaaaaaa agtaaattat ttaagttcga ctttagcgcc agcttcttca agctcttttt
    13141 tagctgcctc tgcctcatct ttgctaacac cctctttaag aactgatgga gttccttcaa
    13201 cagcgtcttt agcctcttta agaccaagac ctgtaagagc gcgaacaact ttgataacgt
    13261 tgattttttt atcgccagca tcaactagaa cgatattaaa ctcagttttc tcttcagcag
    13321 cttcaacagc agctccacca gctgcgccag ctaccataac aggagcagcg cttacgccga
    13381 atttttcttc aaattctttt accaattcac ttagttctaa tacagaaaga ttagaaataa
    13441 attctaatac atcttcttta gttattgcca ttttaattct cctaatttta ttttaataat
    13501 taattaagct gtttgctctt ttttctctct aagcgcattt aagccgatag taaagttttg
    13561 tatcggtgca ttccaaactt gcaaaagcat tgcaataagc tcatcacgag acggcatttt
    13621 agaaagagcg acaactttgc taacagaagc aacttcacca tcaatgtgag ctgttttaat
    13681 cttgaatagt tcgttatttg actcttcaaa tttagctact acttttgtaa ccgctaattg
    13741 atcttcgccc catacaaaaa tatttgtatc tttaagctcc ataccagatt ttccgcaatt
    13801 atttaaagca atatttgcaa gagtattttt aactacttga accttaacgt ttaactctct
    13861 agcgctattt cttaatgctt caagtttctt aacgctaaga cctttataat cgcaaacaac
    13921 aatagcatcg cttgttttaa attcagcttc aaggtttgaa ataatctcgg ctttttcatt
    13981 tctagtcact ttttttctcc tttccgaccg gcgatttcaa gcagagagag ctaacacaag
    14041 ctcaattaag cgaaaaacgc ctcggctatc tccaatctaa gatataaatt taaattattt
    14101 aagatccata agctcttgtg gctcaagagt tattgatgga ctcattgtta atgacaacgc
    14161 agcagatttg atatatctac cttttgaagc tgctggttta tgtttattta tcatcttaat
    14221 aaaagctgat atattgtcat ttagctgatc tttgctaaag cttaccttgc caagtccagc
    14281 atgtatattt ccttgtttat caacacggaa atttacttgt ccgccttttg cattttttat
    14341 agcttgagca acatccattg taactgtacc ggtttttgga tttggcataa gaccttttgg
    14401 tccaagcaaa cgacctattt tacctactaa tcccattaaa tttggtgtag ctataagaac
    14461 atcaaaattt ataacgcctt ttgctatctc atctacaaaa tcttcagcac cgactatatc
    14521 ggccccagca gcctttgcct catccgcttt agcatcttta gctataactg ctactcttac
    14581 agttttacca gtaccagccg gaagcacaac tgagcctcta accatctgat ctgcatgtct
    14641 tggatcaaca ttgagtttaa gagctatttc gactgtttca tcaaatttag cagaagctaa
    14701 agttttaact gtacttactg cttcatcaag agtatatatt ttatcagaat ctactttttt
    14761 aagtaactct gaaaatcttt tagtaacttt ttttgacatc aatttctccg catttttaaa
    14821 gtgctaccac taatgtttaa aatcccagcg gtataggatc aatcaactac agtaattccc
    14881 atagaacgag ccgaaccaga aattatctta gctgcttgct ctttatcttt tgtattcata
    14941 tctacaattt ttttatcaac aatctcaaga atttgagctt ttgttaattg accaactttg
    15001 tttttaagcg gattgtccgc accttttgtg ataccagcag cttttttaat aagatctgta
    15061 gccggcggct gttttgtgat aaaagtaaag ctcttatccg cataaactgt aataacaact
    15121 ggaatattat atccagccat atcttttgtt ctctcattaa atgctttaca aaactccatt
    15181 atatttacac cttgttgacc aagagctgga ccaactggtg ggcttggatt tgcttttgta
    15241 gctgcaattt gtaatttgat ttcgcctaca acttttttag ccataaactt tctccttaaa
    15301 cttatactat cttttcaact tgtgaatata aaatctcaac tggagtgctt ctaccaaata
    15361 tcgaaacatt taaacgaagc ttaccatgaa ccatatcata ctcttcaacc gttccattaa
    15421 agttagcaaa cggaccttcg gtaacacgaa caacctcacc tgtttcaaat gaaattttag
    15481 gtttcggagc tgctctttta ttaacttttt ctaatatcaa attgatatct ttatcgctta
    15541 aaggcgttgg tttcttagac tcacctataa agcgaccgac tttaggaaga gattgaattt
    15601 tatgccaaag tgctgtgtct agatctaaat gtgcaaaagc atatccagga taaagacttc
    15661 tttcattgat cttctgtttt ccatttttta tctcgatcac atcttcagta ggaacaacaa
    15721 cttctaaaag ttgctcttct ataccatgat caacgactaa attttcaatc gctcttttga
    15781 cactcatctc actaccagca taggtttgaa tagcatacca tttatgtgcc attttgcatc
    15841 cttatgcaag ttttgataca gtaaatgaca ttattaaatc aaccaaagcc aaaaatagag
    15901 aaactatagc tacaacagca aaaactgtta taaacgcatt tctaatctgt tctttggtag
    15961 gaaaaataac cttgccaatt tctgctcgtg ataatttaaa ataacttata aatttttcca
    16021 tatctaacct tttgtggcag ggcaggaggg attcgaaccc ccaaccatcg gatttggaat
    16081 ccggcgctct accgttggag ctactgccct aatggcatac agtaaagaag aatgccttat
    16141 ttaagcttaa cttctttatg gactgtatgt ttttttaatc ttgggcaata ttttttaagt
    16201 tccaactttt cagttgttgt tttactgttt ttagttgttg tgtaatttat atcattacat
    16261 tcagcacact tcaaacctat tttaactcta tttgcacttg ccatttaatt tcccttttat
    16321 attaaatgcg agccaaagct cgcaattaaa attaagctat tatcttagaa acaacacctg
    16381 aaccaacagt tctaccaccc tcgcggatag caaatcttgt gccatcttca agagcaaccg
    16441 ggttgattaa ctcaacagtg atttttaagt tatcaccagg cataaccatc tcagtaccct
    16501 ctggaagagt gattgatcca gtaacatctg ttgttcttac ataaaattgt ggtctatagt
    16561 tgttgaagaa tggagtatgt ctaccgccct cttccttagt caagatataa acttctccct
    16621 caaatttagt atgaggagta attgattttg gcttacaaag aaccatacct ctttcaacgt
    16681 cttctttctt tgtaccgcgt aaaagaacac caacgttatc accagcctcg ccttgatcca
    16741 tttcttttct aaacatttca acgccggtaa ctgttgtagt ttgtgtatct ctaataccta
    16801 cgatttcgat agtatcacca actttaacta tacctttttc aattctacca gtaacaacag
    16861 taccacggcc agaaatcgag aatacgtctt caatcggcat taagaaatct ttatcagtag
    16921 cacgaactgg agttggtatg tagctatcaa cagcagccat aagatccata atcttagctg
    16981 accattcgcc atcattacca gctttagctt cttcaagagc ttgaagtgct gatccgctta
    17041 taataggagt atcatcacca gggaagtcat attcgcttaa taactctctg atctccattt
    17101 caactaattc tagcaactct gcgtcatcta ccatatcagc tttgttcata aaaacaacta
    17161 tatatggaac accaacttga cgagatagca aaatgtgctc tctagtttgt ggcattgggc
    17221 catcagctgc agaaacaact agtatggcac cgtccatttg agcagcacct gtaatcatat
    17281 ttttaacata atcggcgtgt cctgggcaat caacgtgcgc atagtggcga ttttctgttt
    17341 catactcaat gtgagaagta gcaattgtaa tacctctctc tttttcttct ggagcattat
    17401 cgatattatc ataatcttta agctcagcaa gaccacgtct tgaaagaaca gcagaaatag
    17461 cagctgttag agttgtttta ccgtggtcaa cgtgaccaat agtaccgatg tttacgtgtg
    17521 gcttattacg tgaaaatttt tccttagcca ttgtatcctc cgttataaat tttaactttt
    17581 aaaatttaaa gtttgtatat catgtatttt cttattttaa cttttatgga gctcatagtg
    17641 ggacttgaac ccacgacctc ttccttacca aggaagtgct ctacctctga gccatatgag
    17701 cgtttctaaa taagaaactt cgtgtggcaa aacagagttt tacaaaaata atacaaacac
    17761 caataactta atcaactaga ataactgtat aatttaaaga atagtaaatt agaatacagc
    17821 tcccagtcaa aatccaaaat ggagcgggaa acgggactcg aacccgcgac cctcagcttg
    17881 gaaggctgat gctctagcca actgagctac tcccgcaata gcaatggtgg tgagacgtgg
    17941 attcgaacca cggaagacaa agtcagcaga tttacagtct gccctcgttg gccgcttgag
    18001 tatctcacct taaataaaat ttttttgatt gctataaata tctggtcaaa cactgttaaa
    18061 ataaatggag ctggtgaacg gagtcgaacc gccgacctac tgcttacaag gcagttgctc
    18121 taccaactga gctacaccag cacccttaac ttgtgagctg gaattatatc ttatttttta
    18181 tactatgtca agagttttta acaaatttaa taaaaatcaa ttaagatatt aagaatatta
    18241 ttttaaaatt taaaaattcc aaatttaata gtactaaata taaaattaaa ttttaaagca
    18301 gcctaattga ttactaggct gcaatttaga ttaatttata actccgcaaa caagtctagc
    18361 accgcctcca cctaaaggtt ttgggctatc actatgatta tccgcaccta aatgaaccat
    18421 taaagagtgt ccttttagct catttatatt tttaattttt gttgataaaa ccggataatt
    18481 tgtatctaca tataaggcgg gaagatctcc tttatgacca tcattatccc aagaaaatga
    18541 gtgtttaccg gtattttgag gatcccagtg accaccagct ttcataccaa gtcctttatc
    18601 actagatccg caatctgggt ttgtatgaac atgaaatcca tgcatacctg gtgcagataa
    18661 tccagaaagt ctaggaaaaa atgcaacgcc atctgctgta tttatagcta cgacttcgcc
    18721 tacgctttta tctccatttg cgctaagagc actcattttg ataacgatat gatctacgga
    18781 ttttggatca aagctattta atggagaact ttgttcgcca tgagttgctc caaataaagc
    18841 agtagctagc aatgcgctaa taaaacttat tttactcata tatccccttt aatttttaaa
    18901 atataagaaa attttaacag taattattaa atagagaata aattaatgaa atactaaaac
    18961 taattaaact ataattttta ttgatttaaa taaatataaa gtgtagtggc ggacagagag
    19021 ggatttgaac cctcgaagcc cgattaagac ttgcaccctt agcaggggtg tggtttcagc
    19081 cgctcaccca tctgtccata aaaagtgaaa tgaaattata ctttttaatt ccttatatta
    19141 tgcttaattt agctttaagt tatattatat aggatttttt cagtaatttc tcttggattt
    19201 ttagattgat atataggtcg tcctacaact ataaaatccg atttgttgct catcgctgtt
    19261 tttaaatttg ctactctctt ttgatcatca tttgactcgc caaaaggtct aattccagga
    19321 gtaagagtaa gaaaattgct actagtagca ttttttatat ctaagctctc ataaacagaa
    19381 catactattc catcaagacc gcattcataa gaaatttttg aaaatttaac tacactttct
    19441 ttgatatgcg ctgcataaat ctcactaaaa ctctcttcat caaaactagt tagagcagaa
    19501 accgccaaca ccaaaggacg attatttaat ttcgacaatc tctccataac actattcata
    19561 gcaactcttc cggcgcttgc atggatattt atcatatctg cgcctatttg cgagataacc
    19621 tcacaagcat cagccatagt atttggtata tcatgcactt tgagatctaa aaatatttta
    19681 aaattatcta catttttaag ttcatttata aatttaaaac catctcttaa ataagctcta
    19741 agtccgactt taagccatac gtcaagacct tttagctctc ttgccactct taaacactca
    19801 tcagagttcg caagatctaa tgctacgcat aatttcatta gttcacctta cttatagcat
    19861 caagtacgcc atttataaat cttgtagatg aatccgagcc aagttcattt gccaacaaaa
    19921 ttgcttcgtt aatcactatc gcactttggg tattagtaaa tttaatttca taagctccga
    19981 gtctaagtat agctcgctca acagctccta tttcgccgag tttccacttt ccaagatgag
    20041 cgtctaacgc ttcgtctatc aaatttaaat tgtctaaaac accgttataa agagttagcg
    20101 taaagctttt ttgatcattt cgtatctttt tttcttctaa aaattcattt gaaaactctt
    20161 ccatctcact gcccatttca tttgcataaa gcaaacttac aacactctgt cttacctgat
    20221 gtctagtagc catcttaagc ctttatattt ttatataaat ttaaaagctc aaccacacta
    20281 gtcattgctt caaaaccttt atttccagct ttgctacctg ctctttcaat ggcttgttct
    20341 atactatcta cagttagaac tccaaaagta actggtttac catatttcaa agtaacattt
    20401 gctatacctt tcgtagtctc agcactaaca taatcgaaat gcggcgtact ccctctgata
    20461 acagctccaa cgcagcaaac agcgtcccat ttcccgctac ttaaaacttt ttctaatgcc
    20521 ataggtattt caaatgcacc aggtaccaaa ataagatcta aattttcttc ttttccgcca
    20581 tgtcttaaaa aagcgtcttt tgcgccttct actaatctat ctgttattat atgattaaat
    20641 ctaccattta ttatagctac tttttcatct ccgtttaaat gcagatttcc ttctattata
    20701 ttcatatttt ctccttaata attcataact aaacaaacga gctttatcca aagcaacatt
    20761 aaattaattt caacattata acactaaaaa ctatcaaaaa tagataaacg cactttttta
    20821 tccctaattt ttcatgatta aacactacgc ctacaaaaac tgctccgatt gctccgattc
    20881 cagtccaaat agcataactc accgacatgg gcaaaacttg catagcatat cttaaaagac
    20941 taagagaaaa gccgaatgtg gccactataa acatgaaatt aactattttt ctaattccgt
    21001 ttgaatgtga aaatttattt agaaatacaa ttcctaaaac ttcacatccc ccagccaata
    21061 aaagagccaa aagatgcatt aactctcact cctttttaac cccaaaacac caattatcaa
    21121 agtaaatata aaaactatgc gcaaaaagtc tatgctactt cctcgaaaat agtcgcttat
    21181 tatttccgtt cctactataa aaagagttcc gaatcctata aaaagagtgt aagccacact
    21241 agctggaaga tatttaaatg ctgccataaa tgagaaaaaa ctacagcata ttaaaataat
    21301 tgttattaga tattctaaat ttgaatcagc gtattttaat ccataagccc agccgccttc
    21361 tactatggct ccaaatatta cgaaaaagag tcccttattt gacatctggc tataaaacct
    21421 ctttaatatt tttaatgtcg tttatatttt tttctaatgc ttcaagagta agcatattgg
    21481 ctccatcgca aagcgcatcg caaggattta tgtgagtttc atagaaaaat ccatctactc
    21541 caacagctgc tgctgccctt gctaagtacg gtacgaatct gctatctcct ccgctagtag
    21601 cgccgtttgc gctaggcatt tgtacgctat gagttgcgtc aaatattacc ggagcaaatt
    21661 ctttcatgat aaccaaactt ctcatatcta caaccaaatt tccataaccg aacgtacttc
    21721 ctctttcgca aagatacact ccgttttgtt ttgcgatctc ataaccaaac tcattaattc
    21781 cgcgtgtctc aagcaccttt ttaacgctat atttcatagc gtccggagat aaaaattgac
    21841 cttttttgat atttaccata gcttttgtct ttgcagcagc taccaaaaga tctgtttgcc
    21901 gacacaaaaa agcgggaatt tgcaaagcat cagcgacctg tgaaacaggt gttgcttgat
    21961 aactttcatg gatatctgtt aatattttaa atccgaattc ttttttaact tcagatagaa
    22021 ttttacagcc ttcttcaagc cccggtcctc taaagctgct tatgcttgtg cggtttgctt
    22081 tatcaaaact ggatttgaaa taaaaatcta tccagcccat ttcgttaaat ttagacaact
    22141 tctcggcaac tttaaaaact aaatccctac tttcaatgac acaaggtcct gctatcaaaa
    22201 ccataattat atttcctaaa tttttaccga ttatagccaa aatcctataa atatttgctt
    22261 actatttctc tttggcgacc aaaactccgc ttaaaacgat aagggctatt ccgcaaaata
    22321 ctataaaatt cggaaaagaa tctccaagca tcaaaccaaa aatcatacta aaaacaacat
    22381 cgctataact aacagctgca acagctcctg cttttcggct agctgcgtaa gcttttgtca
    22441 tataaatttg aaaccatgtt ccgcagattc ccatcaaagc tataaatatc caacctttag
    22501 tatcaggcat tataaaaggg gcaagcataa aatctaaata agaaacagta taaaactcgg
    22561 ctaaaatcat gcacaacaaa ggtataaatg tgccaaatat cataaatgaa agcactataa
    22621 ctccagtatt gtaatacttt ctaagctccc ttatacttgt atatgcaaga gctgcgccta
    22681 taccgcttaa taatcctata agatcatttt tactaacgcc taaatttggt tgaatgataa
    22741 ataaaattcc caaaaagcct ataaaaatag caaaccaacc tttggaactt aatttttctt
    22801 taaatataaa tgcagccaaa agagcggtaa aaatcggact cgtctttgaa aacgtgaaag
    22861 ctgcggctaa atttatattt gctatattgt aaaagaacgc aagtagtcca agcgtgccga
    22921 tgactccacg aaaaataagc aagaacggac gcccgccttt ttgatgcagc ggttttttat
    22981 aaagcgcgat aataataaga atgaatccta ctaaatttct aaaaaataca acttcgattg
    23041 aactcatatc gctacttaac atcttcgcaa atgctccagt agcagcaaaa catatagaag
    23101 ctacaagcat ataatatata ccaaggtgcc tcattaaaaa gtgattatac atagatctaa
    23161 cctgcattca ttttttaaat tttatggaaa attttagttg caatattacc acgatgatac
    23221 ataatttttt ataaatttag ctatttttcg ctataattga aagttttaaa aggaaaaata
    23281 tgaaaaaaat catactagta ggacgtccaa atgtcggaaa aagttcgcta tttaatcgtt
    23341 tagcaaaaca gagaatagcc ataacaagtg acgttagcgg tacgacaaga gatacgaata
    23401 aagctgaaat ttttattgat gataaaaact gtattttgat agacagcggc ggtcttgatg
    23461 atagtaatga gctatttaaa aatgtaaaaa taaacacgct aaatgaggct aaaaatgctg
    23521 atataatcgt ttttatggta gatggaaaaa attttccaga tgaaatagac aaaagatttt
    23581 tctatgagct ttcaaattta aataaaccta tagctctagt agtaaataaa gtcgatagca
    23641 aaaaagacga agagagaagt tgggagttta acgaatttgg cgcgaaatac atttttaacc
    23701 tatctgttag ccataattta ggaaccgacg aactgcgtga ttggatatat aaacttattc
    23761 ctaaaagcaa gataaaagct gatacgagtg atgattttga cgaatttttg gactgtgtta
    23821 atgaacatgg agagatggga ttgccgtctg ttgattacga aacaaaaaat ataaaaatcg
    23881 ggataatcgg cagagtaaat gtaggcaaat caagccttct aaacgctctt gtcaaagaag
    23941 atcgttcagt cgtaagcaaa atcgccggaa ctacgataga tcctgttaat gaaagctatg
    24001 tttatgaaga tagggttttt gaatttgttg atacagcagg tatcagaaaa cgcggaaaga
    24061 tagaaggcat agaaagactt gcgctacata gaacagaaaa aatattagaa gaagcagata
    24121 tagcattgct tgttcttgat gcaagtgagc cgcttacgga gttagatgag aggatagccg
    24181 gtcttggagc taagtttgag ctgggactca ttatagtttt aaataaatgg gataaagatc
    24241 atggcgaatt tgataaagtc gtatatgagc taagagataa atttaaattt ctagcttacg
    24301 ctcctatcat cagcgttagc gcactcggcg gaaaaagagt tcataaactc tatccgctta
    24361 tacttgaagt ttataaaaat tacactcaaa aaatgaaaac ttcaaggtta aatgaagttt
    24421 tagaagaagc cattagaact catccgatcc ctagagatca tggaaaaata gttaaaattt
    24481 attatggagt tcagtttgga ttcgcgcctc cgaaaatcgc cctcataatg aataaaccga
    24541 ggtctttaca ctttagttat aaaagatatc tgctaaataa attaagagaa aactatgagc
    24601 taagcggaac cccggtgatt ttaataccta aaaatcgtag tcaaaaagag agcacagaaa
    24661 atgaaaattg ataaaaatat agttttaata ggatttatgg gagtcggaaa aggcactata
    24721 gcaagagctt tggctgaaaa attaggcgta tttgctatag acggcgatga tatgatagaa
    24781 agttttgcaa ataaaaaaat aaaaactatt ttcgaagaag acggtgaaga agcatttcga
    24841 aagatagaaa aaaatttagc taaattttta gaaaactcag taaaaggagc cattatatcc
    24901 acaggcggcg gattttataa ggtaaaaaat ttaaaaaaaa taggcaccgt gatctatcta
    24961 aaatcaagct ttgaaaagat aatcgagcgt ttaaaaaact caagcaatag cgagaaaaaa
    25021 ttcgccaaac gcccacttct ttcaaattta gaagaagcca aaaatataca cgctagtaga
    25081 gataaagagt atgagaaaaa agctgatttt tctattttgg ttgaagataa aacagcaaaa
    25141 cagataacaa atcaaatagt gaaattacta aattcacaaa aagccaaagg atagaatttg
    25201 agaactttaa caggacttca accttcagga aaactacatt taggaaatta ttttgctagc
    25261 ataaaaccta tggtcgatac tcaaaactta ggcaatgacg atatgtttat gtttatcgcg
    25321 aactatcacg ctatgacttc ggtaaatgaa gcaaaaaagc taaaagagag cacttttgaa
    25381 gccgcgtgcg cgtttttagc acttggcata gatccgaaca aatctacatt ttgggttcaa
    25441 agcgacgtca aagacgtgct tgaactttac tggatactaa gccaactaac tcccatgggt
    25501 ttagtcgagc gcgctcatgc ttataaagac aaagtcgcaa aaggatttga agctcatcac
    25561 ggacttttta gctatcctgt tttgatggct gcagacatct tgctttttaa ctcaaacata
    25621 gttccggtag gaaaagatca aattcagcac gtcgagatag cgcgcgacat agctatcaaa
    25681 tttaacaatg cgcacggaga tatatttact attcctgaag ccggggttca gcaaaacgta
    25741 gctacagttc cagggattga cggagctaaa atgagtaaaa gctacggaaa tacgatagat
    25801 attttcagtg atgcaaaaac actaaaaaaa cagtgcagtt ccatagtgac cgactccact
    25861 gctctagaag ctccaaagca gtggagaaac tgcaacatct ttaacatagc aaaactattt
    25921 ttaaacaccg aagaacaaga ggcactcgca gctagatatg aaaaaggtgg cgagggttat
    25981 ggacatttta aaatgtatct aaacgagctt gtttggaact attttgcgga agctaaagaa
    26041 aaatttgaat actacttaag tcataaaaac gaagtttatg atattcttga tgctggagca
    26101 aaaaaagcta acaacgtagc gtcccagacg atgcaaaaag taagagacgc tgtgggaatt
    26161 tatagataaa ggaaaattat gataaattta aaactaatag agacgaattt tgatgagttt
    26221 aacgctaaat taaaagcgaa aaaagttgat gaaggcgttt taaaaaattt acttgatacg
    26281 tacaatgaac taaaaatcaa aaaacaagag ttagaaaatc ttcaagccgt gcaaaacgca
    26341 aaatcaaaag aagtaggcat actagctaga agcggcgcgg acacaacgct actaaaaacc
    26401 gaactcgaag aaaataaaaa acttatgcag accgcttcaa atttagtaag cgagcttgaa
    26461 acaaaactag acacggtagc tagtagagtg cctaacgtga tagatgatga cgtgccatta
    26521 ggcaaagacg ataacgataa cgtctgtata aaaaccatac ttgagcctag agagtttaac
    26581 tttaccccaa aagagcattt tgagcttgga gaaaatctcg gctggttgga ttttgcaaca
    26641 ggagcaaagc tctcaggtag tcgctttact gtgcttagga gcgatggagc tagacttagt
    26701 agagctttag taaattttat gatagatttc aataccgcta gaggttttga gctagtaaac
    26761 gtaccgtttt tggtaaactc aaacacgctt tatggcacag gacaacttcc taaatttgaa
    26821 gaagatctgt ataaaataag agatgaagac ttatatctta ttcccacaag cgaagttcca
    26881 gttacaaaca tctacaataa cgagataatt ccggttgaaa atttacctat aaaaatgact
    26941 tgttactcag catgttttag acaagaagca ggaagcgcag gacgagatac cagaggaatg
    27001 atacgtcagc accagtttga aaaagtcgag ctggtaagca taagcaaacc agaagatagc
    27061 gcgaaaatac ttgacgaaat ggtaagctgc gcttctgata tgctaaaaga gttggggctt
    27121 cctcatcgtc atatgatgct ttgtagcgca gatcttggat ttggtgcggc aaaaactata
    27181 gatcttgaag tttggcttcc aggacaaggc aaatacagag aaataagctc tatctcaaat
    27241 accagagatt ttcaagccag acgagcaaaa atcagatata aagacggtaa aaaaaatgct
    27301 ttagttcata ctctaaatgg ttcaagcttg gcagtcggta gaactcttat agcgatcatg
    27361 gaaaattacc aaaatagcga cggctctata aatatcccag aagttcttaa aaaatatatg
    27421 taaggataag ctttggcaga tgagcaaaat gaagttcaaa aagaagagat agtaatacta
    27481 gaaaaagatg atggggatat aactccgctt gaagatctag ataaaaaaga ggagcaggta
    27541 gaaactccga aactgcaaaa aaaacctaaa aaaaatattt ttataatagc agccgcaagc
    27601 ggtgcaatag ctttgatttt gttgattgcg attattttat tactaaaaaa agatgaaaca
    27661 aaagagcaac caactaaaaa tttagagcag cccaaacaga cgcaagtcat aacgcaaaaa
    27721 tttagcccat caaaaatcga tgatatgcta aaaaaagcaa acagtctcta tgaaagcgga
    27781 aataaattcg aagcactcaa aatttatgaa aacgtagcaa tatataatga agccttatcg
    27841 aattacaatc ttggcgtatc tcaaatgaat caatcaaaat ttgaagacgc gatcagctca
    27901 tttaaaaaag ctatagaaaa caatgaaaac acttccgtaa gcgctctaaa cgctgccgta
    27961 agtgcacttg agataaataa cgaaccgttg tttaaatact atatagaatt agcaaatgct
    28021 tttttaagta aagaatcaga ctctagttta tacgactatt ataacgcgtt aataaactac
    28081 tacaaaggct actatataga agctttgcat atattagata gctcaaaaaa tcggtattat
    28141 gaaggtcaaa aaaactatct tagatcaaaa atactaagct atatatatca agataaacag
    28201 tccataaaag cccttgagaa cacaaatacg ttcgatacga atatacctat gggacttttg
    28261 tatgctaggc ttggcgaata tgatctagca agaaaatatc tgaacaaagc tttagttgat
    28321 gaaaataatg ccgactcaac aaaacttgct ttagctttaa tcgatataaa aacaggacaa
    28381 ttcggctctg ctgcgctaaa tttaaaagat ataaacgata aaaactctac atttatatct
    28441 gaaacgtatc ctataaaaac tatattaaat cctgaactgt ttgatataaa tatggcacaa
    28501 aaaaaattca gcgtagatat gctttttagt aaagacaaca tatatcagat actattttat
    28561 tttactccat ataaagtatt tgatgctaag cagactataa attacataag aaaaggtgga
    28621 atcagtgtat ttatcgatga gaacacgcaa gccgatgagt atctaaaaac aagcggagct
    28681 atatcaaaag taaatttaaa tttatcaaaa actatagcaa cggcactaaa ttataaccta
    28741 agagaggcaa ataaggagtt cttaaatatt attaaaattt actcgggcca ctcgatactc
    28801 cactataatc tagcactaac ttatgctcaa ctcggtaatt tttctgaggc atatagacac
    28861 tttatcacaa gctaccattt agattctaca aactatttag caggagttta tgcagttatg
    28921 acatcctcaa tgataggaaa agataataaa aaacttatat cagaaatact tgataatcta
    28981 aacgaagatt caaatttaaa tcaagaaaat atatatgact caatggtgca gctagtactg
    29041 ggcaataacg gtgtacttca aagatggctt gatacggata atagtacaaa tatcttaaat
    29101 atagtttttg atatcatagc ggctcagata acaggcagga aagatattat aatatcaaaa
    29161 acagacaagc ttaaagagat tttacctaat gatattatgg caaatattct ttactcaaca
    29221 gcaagattta cagataataa tataaaagat tacgctagag atattcaaca tggatttttt
    29281 aataacaatg tcaataaaaa ggcgctatac ggtggagcaa atatcataag aattcaatat
    29341 atcaaactat tgcaaatagc gggacttctt aatgtagaaa gagatcgcat aaaatctgat
    29401 ttagaaattt ctactcaaaa cgcacaaaat atactccaaa ctttagctta tatagatcta
    29461 ttcaccgcaa attttgaaga gtcgtacagt atatacaatg agctaataga taataaaaac
    29521 gtaaatgatc caaacacgct attcttagct agcgtagcaa gtataggagc aagacatcca
    29581 gaaagtgcga ttgggtattt agagctatca aaattagtag atccaacatc tatagaagat
    29641 agattagctc ttggtatgct ttatcaagaa gtaggaaata tagacgcggc aatatcacaa
    29701 tacgaaaata taggaaatac aagctacaaa agtgaatttt tcacttttga gctggtaaat
    29761 taattaaatt tggctactat ctatttttca tagataagta gctatttaaa gcgcttacat
    29821 atgctttagc gcttgccatc atagtatcaa tatcaagccc atgaccgatt gtagcgcagc
    29881 ttgaaccttc aaaaacaacc ttaacagtga tctttgcaag tgcatccttt ccttgcgaaa
    29941 cagcattgac tttataatct ttcaactctc cgctaattcc actgatccta tcaatcacct
    30001 taaatatcgc atcagcagta ccgtttccaa gagctgcgtc gcttattata ttatcgctaa
    30061 atttgatgct cacagcggca cttgagtgtc cggcattaca tgagcttgtg cttaaagttt
    30121 gtatagagta aatttctggt atttttataa tctcatggct aacaagcgct cttatatcat
    30181 catcaaagat ctcttttttc ttatcgcata actctttaaa tttaataaat gcttcattta
    30241 tctcattatc atcaagatca aaacctaaat ttataagttt atctttgaat gcgtgtctgc
    30301 cgctgtgctt acccaaaact aaactatttt tctcagcgcc tatatcttca gcttttatga
    30361 tctcataagt ctgagcgcat tttaacatac catcttgatg aataccactt tcgtgagcaa
    30421 aagcattttt accgactata gctttgtttg gttgcggctc aatgcctgtt atactagcaa
    30481 ccagtctgct ggtggcgtag atctcttttg tcactatatc cgtataaagc ggagcaaact
    30541 catcacttct agttcttata gtcataacaa tctcttcaag agcggcgttt cctgctctct
    30601 cgccaagtcc gttaatagta cattctactt gtcttgcacc agctttgata cttgctaaag
    30661 tatttgctac agccaaacct aaatcattat gattatgcac agaaataata gctctatctc
    30721 ctataaaatc taccattgat tttaccatat tatatatctc gtctggcatt ctaaacccaa
    30781 cagtatcagg taaattcaga gttctagctc cagcttcaac aacagcagca caaatctctt
    30841 ttaaaaatac tatatcgctt cttccagcat cttcacagct aaactcaaca tcatctacaa
    30901 aagtcttagc gtattttaca gcctcgactg ctcttttaat aacttcatcc ggagtcattt
    30961 ttaatttatg ctccatatga ataggactcg tagctataaa cgtatgtata cgcctatttt
    31021 ttgctggaga tatcgcttcc cctgcggctt taatgtcttt ttctaaagcc ctagcaaggc
    31081 ttgctatgcg aatggagtga atttgttttg ctatttgatt tatagcatca aaatcaccgg
    31141 ggcttgccgc ggcaaatcct gcttccataa catcaacacc taagcgctca agctgcaatg
    31201 cgatctgaat tttctcttca gtattcattg aagcacccgg gctttgctca ccatctctta
    31261 aagtagtatc aaaaactatt attttattat tatccatttt gttatcctct tttttaaatt
    31321 tagcatattg ctaagtgtaa agatttaaaa tcaccttgtg ttttgtatat tggggttatt
    31381 aaaaaaatta agttttacag caggttaagg agagagagtt tgtagataaa tatatatttt
    31441 ttttgtgaaa atggcgtggt catctgttct ccttggttaa ttttatattt ttagcaaaaa
    31501 atcttgccca tatggctcta attataccat aaattgtgta aatagtaata agaattgttg
    31561 cgctttctaa cgggcataag tataacatag aaaatattat tactaaataa acaagtgttt
    31621 ttaaataatt tgctctttta aaatcaactt ttttaaaact cggatatcta acatttgata
    31681 ccataagtac ggaaagtccg gccataatca ctataaaaat aggctcaaaa ccgtgcataa
    31741 aatcataatt attataaatt ccaacccaaa aagcgctcac tatagcagca cttggtatag
    31801 gaagccctat aaaaacattt ggttcacaag ttccgctcat aacattaaat ctagcaagcc
    31861 ttatagcgcc aaatactaca aacatagctg ttaaaagtgc tccgaaacga ccgaaattat
    31921 aacctatact gaaataaaaa agtaaagccg gagccacgcc aaacgcgact aaatcagcta
    31981 aactatcaaa ttcgactccg aatttagaag tggttttcgt aagcctagca actcttccat
    32041 ccaaaccatc taatatcaaa gataaaacta tataaattat agccttcata tattcaccat
    32101 tagcagacgc taaaatgctg ataataccta aaaaagcact acctgctgta aataaatttg
    32161 gcaatatata tattaatttc ggcttatttt ccattatttt attcctctaa aaagcctatt
    32221 aaatcagctg cttttactct gttaccaacc gaaacattta attttgtagt aagaggtaaa
    32281 aataagctta cccttccatc taaaataaat ccaaatcttc taccggcttt taactctttt
    32341 gttttttcaa gatgtatttt tctactcatt gcaccggagt tgattcttat gataacttgc
    32401 ttatctccaa cagagcatat ataagctatt ctattattta atagattttt atctaagcta
    32461 gttgtcgcta aatttagacc gtttttagat ttaatctcat cgacttttaa atttgctaca
    32521 gctcgcaata ctccagaatc aaaaatagag ttttttataa caacttcggt atataaaaca
    32581 ccattataac tactttttct tatatcttcg ataacgccgt ctataggaga taatatggcg
    32641 tccatactct ccacattagg aagtctttct gggtttctat atataaacac tacaaaaatc
    32701 agcaaaatag cagatagaaa tataaaagta tcaaataaga gtgataatag aaatatgact
    32761 ccaaacaaac cgatactgca atatccatac ttacttatca ctcttaaatt atccatagct
    32821 attccttatc ttttgctttt tttatatcgc tattaccgtc ttcttcgact attaaacggc
    32881 ttggaatatt gttttcttct tcataacttc tgataatctc tctaaccttt gagccttcta
    32941 tagtctcttc ttcgtataaa gaatcaacca tcttttctat agctccgcga taaagctcaa
    33001 gagtggccac tacggcatta aatctttcat ttaaaaagtt ttttacatac tcatctagtt
    33061 tatgggccat atcatcgcta taatctttta aagtttgccc accatttaaa aatacgtttc
    33121 tttgcttttc aagcaccata agacctgcaa catctgtcat tccatacata gaaaccatag
    33181 cttttatgat atctgttgct cgctctagat cattgctagc tcccgtactt atctctttta
    33241 taaacacatg ctctgccgcg cgacctccta aaagaacatc aacttttgcg ataagctcgt
    33301 gtttttgcat taaaaattta ttctcttctg gagcatttag cgtatatcca agagctgcaa
    33361 ttccccttgg tataaccgaa actttagtaa ctttatctgc accttttgta gtttcagcga
    33421 taagagcgtg accacactca tgataagtaa ctatcttttt ctcttttgga tttatacggc
    33481 gagatttttt ctcaagtccc gcgatagctc tctcaacggc ttctataaga tcttgttgtt
    33541 caatatactc tttgctagca cgacctgcta aaagggctgc ttcatttatg atatttgcta
    33601 gatcagcgcc tgcaagtcca gcagttaaac gacctatatc atccatattt acattattag
    33661 caagttttac ctctttacta tgaaccttta atatatccac acgaccttta aaatcaggtt
    33721 tatcgactaa aacttgtcta tcgaaacgtc ctggacgaag gagagcggca tctaaaacct
    33781 caggtctgtt tgtagctgct aaaactataa ccggactttt atcactatca aatccatcca
    33841 tctcagccaa aagttgattt agagtttgct ctctctcgtc attcccgccc atcatggctc
    33901 cagctgctct gctttttcct atagcatcta tttcatctat aaatacgata gcaggagctt
    33961 cttttttcgc attttcaaat aaatctctga ctctactagc tccaactcct acaaacatct
    34021 ctataaagct tgatccagaa actgagaaaa aaggaacatc agcttcaccg gcaaccgctt
    34081 ttgcaagaag agttttaccg gttcctggag gtcctactaa aagtacgcct ttaggaattt
    34141 ttgcaccaag tcttatatat ctatctggat tttttaagaa atcaactatt tctttaacct
    34201 cttcttttgc ctcttcgact ccggctacat cattaaattt aacctttggt ctctcgctgt
    34261 ttacaagctt tttactgcta cccattccaa gtattccacc gcccatattt ttttgcattc
    34321 tgctagcaag aaacatccaa attccaaaaa atataaatat aggaattacc catgaaaaaa
    34381 gcatatcgct aagccagttt gtctcattat aagctccgta gcttactcct tcactctcaa
    34441 gaagcggaac aagcgtctgg tcatttactt tctttgctac ataagttaca ccatttccgg
    34501 tggcttttat agtagtctgt cctattacta cattatttat ctgctttgat tttataagct
    34561 gttttaactc cgaatatgta atatttttag aactagtact atctccgaat tcgttcatac
    34621 cgtctgggtt aaaacttcta aatacgacaa ctattattat tgcaaaaatc gcaaaaacca
    34681 taataggatt tttgttaaaa aagtttccgt tattattatt ttgcccgttt ttattctcat
    34741 tattttccat ttttatcctt atttttgaat ataaaactct cccactcatt ttgagtgata
    34801 ttccaaacaa gctctaaatc cccaaaagcc tgtaagattc tatctttgta ttttgttaat
    34861 ataccagata atatcagata tccattatta tttacatgca tttttagatc tttagaaagt
    34921 agtaaaatca catcagatat gatatttgcc actacaacat catatctgcc attagcgtct
    34981 gtgatagaac cggtccatat gttattaaat ttaataccgt tttttcttgc attatcagtg
    35041 ctgcttaaaa cagcttgttc atcggtatcg caagcatcta ccgcgagtcc taattttgct
    35101 aaagctatac ttaaaattcc gctcccgcag cccacatcta aagctatctt gcactctttt
    35161 aaatttatat atttactaat caaatttaag caggagcttg tgctttcatg atgaccagag
    35221 ccaaatgcaa gagcaggatc tataattata tctataaaac catctttttg ttcttcccag
    35281 ctaggtctta tatagaattt accggaggat acaggcttaa tgcctttttt atactcattg
    35341 atccaatcta tattatcttt gatctctaag ctggtggata tatcagatcc gattcgtcca
    35401 gcaaattcct ctaaacccca ggatatattg cttagatcgt cttcatctct tagtataaag
    35461 ccgttttcta tctcttctat gcaagtagcg cctagttcaa acgcaaactc ttttagaaca
    35521 tcgcttttac ggcttaaaac ttttagttca aaaaactttt ctttcattaa ttaagaacgt
    35581 cttcaagttt ttctttaagt acttgcggag taaatggctt aactatatag ttattaactc
    35641 cggcttttaa cgccgtaata acctcagcct taccgccttc ggtagttacc attataatag
    35701 gcatattttc gtatttttgt tcggccctta ctttttttac aagttccaag ccattcattt
    35761 caggcatatt ccaatctgtg attaaaacgc ctatatctgg attttgttcc aaaagacccc
    35821 atgcttcaag cccgtgctca gcctctaata tatctttatg accaagcctc tggagagtat
    35881 ttttaataat tcttctcata gtagagctat catcaacaac caataacttc actaatcatc
    35941 ctttctcaaa tttctattat tctatcagaa tttagtttta aaaaaacttt aacagaatta
    36001 aaaattagac ttaaaagctt cttttaaatc taatttaccc tcataatacg cttttcctac
    36061 tatcactcct gcaatattac catttagttt taaacatttt atatcattta tatctttaac
    36121 gccgccgctc gctatagtat cgataccgct agcctttgct atagaagcgc taaattccac
    36181 atttacgcca ttaagcatac cgtctctact tatatcagta gcgatgatgg cttcaactcc
    36241 tgcatctgca tatagttttg caaggttaga ggcttgcatc ttacttacat ttgcccagcc
    36301 ttctatagct acaaatccat ctatagcgtc tatgcctact actactctat atttttttgc
    36361 tacttctttt acaaattcgg gatttttcag agcgattgaa cctaatataa tacggctgac
    36421 tccagaattc aaatagcttt ttatacgctc ttttgtcctt ataccgccac ctacttctac
    36481 ttgtaaattt gtagtagaaa ctatcttttc aatagttttt aaatttatag catctccggc
    36541 aaatgcgccg tctaaatcaa ctatatgcaa ccatttagca cccaaatctt caaattcttt
    36601 agctaattcc caaggtttat ctgagtagat cttagcagtt tgcatatcac ctttagtgag
    36661 tcttactgct ttactctgtt ttaaatcaat agcgggtatt atctccatta caactccaca
    36721 aaatttttta taatcttaag cccgttttca tgtgattttt caggatgagg ctgaaatcca
    36781 aaaacattat ctttacaaac tgcactcaca aactcgtatc cataagtagt aacagccaaa
    36841 acagactcat catcacaaac agcgtgatat gaatgcacaa aatagagata agaactcttt
    36901 ggcaaacctc tgtttatact gcattctttt ttaaattcgc agctattcca ccctatgtgg
    36961 ggaactttta gatgcttatt aaatttactc tcatcaaatt taataacatc accttttata
    37021 actccaagtc ctttatgctc accaaactca aatcctcgct caaataaaag ctgcattcca
    37081 agacatatac caagaaacgg cttaccgctt tttataaact ccaaaatacc atcttccaag
    37141 ccatttgctc ttagtttttg catcgcgact ccatacgctc ctactcctgg aagtataagt
    37201 ttatcatatt tttttaaatt atcaccaaaa ctaatcaatt cactttttga acctatatac
    37261 tcaaaagcat tttttacact ttttatattt cctgcaccat agtcaataat ccctatcaaa
    37321 gctgctcctt tttagcaccc aaagatatag gcttaaagct accatgagca tggcgacacc
    37381 gcctattaaa tatatagcat atactactcc gctaggattt gtaattgcaa atttaaaaac
    37441 aagcattaac gactctatcg caagtgctat gatgatactt cctataaatc tcaccatagt
    37501 cttgctacca ccgttattat cgtgatttga tcgacctaaa acctcggctt caaatatagc
    37561 tttcaccaga tcaaatatag ccaaagcaag tgtcaaaact atggtagatt caaatacttc
    37621 gcttatatta atatcatgaa aactttttag cacaaaacct tttataccgt gtatgaaaag
    37681 tacaacggca actataaata aagcaagtga aaatatagaa tatactaatt tactaaattt
    37741 accgaataat ccgtcgacgg aacttggatg aacaagtttt aagatatcaa caaggcttat
    37801 atccatgcaa gctatatatt taagctcgtc tttatcgtca taaaccggca tagaagcggt
    37861 cacgcaaagt ccgtttgtaa ggcttgaagg atatggatca gttagtacgc agcgtttttc
    37921 tctaactgct ctgtaataat atgctttatt acttctgtta tcgccttttc ctatcatctt
    37981 ttttgagtct aaacttatat tgttttctat ttgaacgccg tttttatcaa gtatataaaa
    38041 tgcttcaaaa tactctattt catgagctat tttatcaaag ccgtctttta ccaaagatag
    38101 attaactcca ggcaagttat ttggtatatt cctatcaaaa agataacaca aataagctct
    38161 tgctttatac cttatatcgc taaattcttg aatctctttt ataagcattt taatccttat
    38221 ttaatgaatg atgaaactct ggaactatat tttttagctc tgtttctatt aacgtttcat
    38281 cttctaaatt tataagttta tttatctgcg aattgagtag atttagatca tactctccgg
    38341 attttgtcac aaaaatactc tcaaatttag tagccgcgtc attcggatct atgagtagct
    38401 cttcataaag tttttctccg ggacgaagtc cgacaaattt gataccgagc tcctctttac
    38461 cgcttaattt caacattctt gccgcaaggt ctgctatttt aaccggttct cccatattta
    38521 aaacaaaaag ctcaccgcca tcagcaatac tcgctgcttg tagcacaagc tgacaggctt
    38581 cgctaactaa cataaaatat cttgtgatat ctggatgagt tacgcttagg ggctcgtttg
    38641 ccgctatttg agctttaaat ttaggtataa cgctaccgct gctacctaaa acattaccaa
    38701 aacgaactgc cactatctcg gttttgccgc tttcatttga atttaaagcg tacaactcac
    38761 aaacacgttt tgtcgttccc attatatttg taggtcgtac tgccttatcg gtagagataa
    38821 gcacgactct ttttgttccg tatttttttg agagatcgac aacgtttttt gtacctaaaa
    38881 tattgttttg aactgcactt ataggattaa actcacaaag cggaacatgt ttatacgcag
    38941 ctgcgtgtat aacaatatct ggcttaaatt tagcaaatat ctcttcaaac tcttttaaat
    39001 gcattatatt taacattaca agcttgtttc tcatatcact tttcgtagct tcgtttatct
    39061 gatatagatt atactcgcta tgctcaacca ttataagatt tttgcagcca tatttcaaac
    39121 actgcttaca aatttcactt cctatagttc caccggctcc ggtcaccata acaaccttac
    39181 cgccgataaa cttctcaaca accttgctat ctaaatcttt tggctttcta gcaagcaaat
    39241 cctcaatact aatatcggta ataccctctt tttttccgtc aagcaaagag aatatcttga
    39301 tatctttaaa acctatctca tcaagctcgt cataaagctc tttaagctca tttggacgca
    39361 gttttaaagc tataatcgcg gtttttacgc catcttctac ataatttttt aattcgcttt
    39421 tatttcctac taaaaatcca tcacaataag ttcctaccac atcgcttctg ccatctacta
    39481 tcccagtagc atagtaatcc gcatatccgc tttttaatcc ttttaatacc tgcaaagttt
    39541 tactagtgct tcctataata acacaaggtt cgccattatg cgatttttta aaatccaaaa
    39601 atatacgttt tactattctt aaacttccaa ccatcaaagc cgataaaata gcgtctatta
    39661 tgataacgct tcttggaaat gggttaaaaa actcatcgta agatataaaa atagtataaa
    39721 atattccggc agatagtata gtaactaaaa atatttttct agcttcattt agtccaaaaa
    39781 acctccaggg aactttataa agacgaaaaa tccacattaa aactaattta gacgatacta
    39841 aaataattcc gccatatatc attcctcgct caaatatctc aggtatttct ccactaaatc
    39901 taagcaaaaa tgcaaaatat atactgagac aaaatataat agtatcaaat attagaaaaa
    39961 atatagtacg cctatttttt gtagctctta atatcaaagc gatttcctta ctatacctgc
    40021 tactttgccg atcatatcat cgctcatatc agctccgctt ggcaaacata tacctctatt
    40081 aaaataattt tcgctagttc catcaacaac tcttaaagta tctttaaaca caggctgcat
    40141 atgcataggt ttccaaagcg gtctgctttc tatatcattt ttatttaatg cttctataac
    40201 ttttaaatgc gcatttttct ctttgaaaag caaagtcgta agccaacgat ttcctcttga
    40261 gtttgcaacc tcaggcataa actcacaaca atcctctaac aaatttttat aaatttcaaa
    40321 aatctctctt tttcttttta ccctgctagc caaaacttcc atttgaccaa agcctatagc
    40381 gcctaaaaca ttgctaagtc tgtagttata tccataatcc aaatgctcgt aatgcaaaag
    40441 cggttctctt gcttgagtac ttagatatct agctttagcg actaaatttt cgtcatttga
    40501 aatcagcatt cccccgccgc ttgtcgtaat gattttattg ccattaaaac tataaactcc
    40561 aatatcgcct aaagttccaa gagctttatc ttcataaaat cctccaagag cctcagcagc
    40621 atcttcgata acttttatat cttcattttt acaaatttca agtatctcgt tcatctttgc
    40681 agcttgtccg taaagatgag ttactatcag agccttcggt tttttaggtg cattttttat
    40741 cgcctcttta agcagttttg ggcttaaatt ccaactctca tcacagtcta taaacatagg
    40801 aatgcatctc tcatacatta taggatttac gctagccgca aacgtaaaag atgaagctaa
    40861 aaccacatcc gcatctttaa cgcctataac tctaagagcc aaatgcaatc ctgcggttcc
    40921 agagttcaac gctagagcag atttagcacc gctatagttt tttatactat cttcaaattt
    40981 atttacatat tcgccaagag gggctatata attgctttta aaaacttctt taacatactt
    41041 ttcttcatta ccgcccataa atggagggct caaaaaaaca cgtgccataa aacacttcct
    41101 ttaatttttt gtgtatttta tcaaagatag cataaactga agttaaaaca tgaactattt
    41161 tctctaatat tatataaatt taaaaatata aaaaataact aaataagaat taagaatatc
    41221 ggtatttgtt agttt
//
LOCUS       DAPPKW010000006        39345 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.006, whole genome shotgun sequence.
ACCESSION   DAPPKW010000006 DAPPKW010000000
VERSION     DAPPKW010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 39345)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39345)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39345
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.006"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..2447)
                     /locus_tag="RPW04_000294"
     CDS             complement(<1..2447)
                     /locus_tag="RPW04_000294"
                     /inference="COORDINATES: protein
                     motif:HMM:NF014021.1,HMM:NF014069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDX6294414.1"
                     /translation="MGRVSSIKFLKSKDEDSVLASCKDGVLKCKKALKKQFIKLGGRS
                     FGTYQSKEIDKFFKCAFEATKISYFGEFAPDDEQLPISVIALGSYALSEMSVRSDIDF
                     FISYKNVAGYNVKDIVKSYIKFLKDINLDINPVYYEIDELFDAIKDDLELKTMFYQVR
                     YVCASKQLYKMTKDKIFELKEYKKDDFIKFHLSKLTPFDEIKLLSQKPDIKNGYGGFY
                     DFKRVFWLLNSVDENSPKSHALKFISEKEISELNLSVDFISSLRSALQISGGDDELKS
                     EYLSEVSSVMQTKEKKMLSAEVLLMVKTLSSMHTIYIYSRYLAKTVFRRFFDSGLNFT
                     QKRVLRLENGFYNINDTIYAPIHKKPKDILNLVRDLLMLPDIDLKFDIGAIFYLKRTI
                     IQKESIEKSLVEFKKLLYRDRSFGILKALLDSELLFLLLKPMEHTRHLAQLDGYHKYS
                     VDEYSLLALYHLENIKDSFIKSLHSDLCADGKILMKLVALMHDAGKGLVGDHSNIGAN
                     IFRAYANKIGLPQKAINMGVNLIKNHTIMNNIANREDIYNQQVILNFISHIGEKQALK
                     LLYILTYCISNATNDGFYNSYNAKLLRELYEIALKSFDNSDENLLDEAARRVKKENLI
                     KKQKEFLELSKDEQNIILSISSNLLFIKYPPSEIIRIFLWAQNCSNISVDIENRDNFC
                     VKIIAKRGWNTTMVLNKLAHLDLAYMEIFELFDSKFFIKLEYNQKASDSEMKNMETLI
                     IGALCDKQKALTKKPLILENEVNFDLNHSKIYAKMNINAKDQRGLMAYILGVFELFDI
                     KVANARIQTIKNRTRNL"
     gene            2557..3639
                     /gene="mqnE"
                     /locus_tag="RPW04_000295"
     CDS             2557..3639
                     /gene="mqnE"
                     /locus_tag="RPW04_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminofutalosine synthase MqnE"
                     /protein_id="HDX6294415.1"
                     /translation="MNLLDKLQNKKRLGFDEGLMLYDLDLFTLGKYANQIRRKLNSNK
                     VYFNINRHINPTNLCADTCKFCAFSAHRKNDNAYTMTHEEIMKAVDESVKNGVKEIHI
                     VSSHNPFVTPQWYLEIFKMIKQKYPFLHIKAMTAAEIDYLKRKHGLSYEETIDKMIEY
                     GVDSMPGGGAEIFDEDIREQICKGKVSSKNWLLIHSLWHKKGRQSNATMLFGHIESRA
                     HRIDHILRIRDLQDKAIKNANSGGFNAFIPLVYQRNNNYLKVDEFLGSAEILKTIAIS
                     RILLDNIKHIKAYWATSTLNLAMVAQEFGADDLDGTIENESIQSSAGAKSKHGKSKNE
                     FIELVQTSGFIPVQRDSLYNELQIYN"
     gene            3649..4980
                     /locus_tag="RPW04_000296"
     CDS             3649..4980
                     /locus_tag="RPW04_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDX6294416.1"
                     /translation="MDYFKLKESNTSVKQEFNAGLTTFLAMMYIVPVNMLIMSDAGMP
                     KEALLTATAVITIISSIFNGFWANTPVALSVGMGLNAYFTYGLVIGMKIPWQTALGVV
                     CISAIIFVILSFTNFRIWIIKNIPIDLRRAISAGIGAFICFVGLKQMGIIVASPATLV
                     AIGNVSDPKVFIGILGLVLIVAFWALKLKAGFILAVVATSMIAWIFGVYQAPNEIFSA
                     PASLSPIFGELDILSALKLSLLPAIITFFITHLFDSIGTLTGVCNRANLFNDHDEEGT
                     KKLAKNLESDAISSVVGSIVGTSTITAFAESASGVEAGGRTGLSAVFTGMLFVLTLFL
                     LPLFGSIPSNAIYPILVMVGVLMFSELGKVNYNDPAICVSTFLTVILMPLTYSITVGL
                     SIGFISYFTVKLVLRKWEDINLGIITLTLISFLAFLVTSAPSFFGELIGIN"
     gene            4990..5433
                     /locus_tag="RPW04_000297"
     CDS             4990..5433
                     /locus_tag="RPW04_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HDX6294417.1"
                     /translation="MIFYDYESFAKDIKIMAKNIKNEFDPDAILGIARGGLTLAHSLS
                     VALNNRNCFSLNSVHYEDTKKLDTINIFNIPDLSKFKKILIADDIIDSGESMIAIKKE
                     LLKKYPNLEIKVATIYYKTKALLLPEYSVKEAHDWVEFFWDIKLD"
     gene            5437..6579
                     /locus_tag="RPW04_000298"
     CDS             5437..6579
                     /locus_tag="RPW04_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDX6294418.1"
                     /translation="MNKVELLIMYFCTGLTLCVLYATQPIGPVFEKELSITRTQATLF
                     TTSMMAPLAFASIFYGYLLEKIEIKKLLVVAFLLLGGSEITFSFTSSYFWLLNIRGFQ
                     GLIVPVVLTGIMSYISQISTKENVTSAIGAYVGVTIIGGFLGRFLSGLFTDIFGWRIF
                     FLLVGILLLMAAFLVFKFSSNISASLIKPKLKDIAHILKIKHNLYIYLMIFGIFFSFQ
                     AILNFIPFELANLGNEYSGSKTGMMYFGYIIGVLVAFNSKKIIAILKTPLNAIIIGII
                     IFLAALQIFRFESFLVMFCAMLVFCLGNFIIHSIASGFINKLADSHKGISNGLYVSFY
                     YAGGALGSFMPSFLYIAYGWGAFLSLISVISAVSLMFVFALRHEKY"
     gene            6566..7774
                     /locus_tag="RPW04_000299"
     CDS             6566..7774
                     /locus_tag="RPW04_000299"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294419.1"
                     /translation="MKSISIFKNELFLLFSAIIFNILLLIYSVSNLSISYNEAIIYFQ
                     KTNFLTIVTNASTMLFGRNDYALRLPFLILHFLNIFLIYKVSKPILKRKSDRLISAIL
                     YMFLPGVLASAILINEAGFVIFITLLIIYFEQNKMFKSFIFTLLVSLIISEPFISLYI
                     AIIFFGIFKRDKKLAIFGLIFCLAWFWLNGIDAYGKPKGYFIDTIGVFAAVFSPLIFI
                     YFIYTVYRIAIKEEKTFLWFVAITAFGICSIISIRQRPSLEMFLPFCVIFMPVMVRTF
                     FSSYRARLPKFRIKYKFITIIVLTTLFLNSSATIFHNFLYIFLKDPKDHFAYKYDVAK
                     ELAQKLNELGISYVKTDQNLAVRLKFYGVLKGKEYILTRSKNDNCDQTVIKIKKLGKQ
                     IDKFYLCKII"
     gene            7793..8464
                     /locus_tag="RPW04_000300"
     CDS             7793..8464
                     /locus_tag="RPW04_000300"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDX6294420.1"
                     /translation="MKKAFTLIEIIIVLVIVGIMASFTIPKLNRNDLRLAADQIVSHI
                     RYTQHLAIIDDKFDTKDTNWYKGRWQIFFTKTIETKNKQTYNIFNDIIGDSAGFPNKT
                     ELAKNPLNPSKYMSSGYSGAIDSNSPEASKELNLEDTYNIINVKLQDGCSKQGSPTRI
                     TFDELGRPYKGNVTSNTRHSQDLITKICTIKLTHTNNDCIFIKVTPITGFAYVEQPAK
                     KADCK"
     gene            complement(8467..9657)
                     /locus_tag="RPW04_000301"
     CDS             complement(8467..9657)
                     /locus_tag="RPW04_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDX6294421.1"
                     /translation="MVKYLLLKYLRFDKTQPFITLSAILAFLGVSIGLMVLIVAMAIM
                     NGFDKEFERKLFTMNYPITILSHLKGSISNLDVDELRQKFPNLKLSPYISTQTILKNG
                     SQLEGGLVFGVDFNDEKEINSVIKDAIKDSIPTGFEIVIGKGIKNEFMLGENEKITLI
                     FMQNSPTGLAIVPTMKRFNAVADFSSGLIAYDKAYSYTDVNALRKVLGYDDDKFDGIH
                     IYSQNPKQDIIKLNDILPPGQKAVGWWEQNGNFFSALALEKRALFIVLMLIILVASLN
                     IISSLLMTVMNRRQEIALLLALGASKNEIKKSFFTQGLCIGGSGILFGLALGLFGVWL
                     LGSFDIINLPADVYGSSKLPMELSLSDLSMIIIGAIFIVAFSSYYPAKKASNVDILTT
                     LRNE"
     gene            complement(9659..12226)
                     /gene="secA"
                     /locus_tag="RPW04_000302"
     CDS             complement(9659..12226)
                     /gene="secA"
                     /locus_tag="RPW04_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDX6294422.1"
                     /translation="MITAIAKKIFGTRNDKEIKKYFKRVALINALEGKYSNLSDDELK
                     SEFSKLKVDLLSKKVTKDDILNDVFAIVREVSKRTLNMRHFDVQLIGGMVLNDGRIAE
                     MKTGEGKTLVATLPVVLNAMDEKGVHVVTVNDYLAKRDATQMSEIYNFLGLSVGVILS
                     GEYDDEKRKIAYNSDITYGTNNEFGFDYLRDNMKFEVGQKVQREHNFVIVDEVDSILI
                     DEARTPLIISGPTNRTLDGYIQADVVAKQLVRGEAADPRVPNSKATGDFVVDEKNRTI
                     MITEAGIAKAEKLFGVDNLYNLENAILSHHLDQALKAHNLFEKDVHYVVRDSQVIIVD
                     EFTGRLSEGRRFSEGLHQALEAKEGVKIQEESQTLADITFQNYFRMYSRLSGMTGTAQ
                     TEATEFSQIYKLEVISIPTNVPIKRVDRDDLIYKTENEKFKAVIEEIKRSNIKGQPVL
                     VGTASIEKSEIFHKMLVKEKIAHSVLNAKNHEKEAEIIAQAGAKGAVTIATNMAGRGV
                     DIRIDDEVRELGGLYIIGTERHESRRIDNQLRGRAGRQGDPGLSRFYLSLEDSLLRIF
                     GSDKIKAIMDRLGIEEGESIESRLVTRAVENAQKKVESLHFESRKHILEYDDVANEQR
                     KTVYKYRDELLNPDYDLKDKIISNRQDFVKTLLDEVNIFDGGLGDEFDISRLCEVVYG
                     ESGTKIDEDEIKGLDYHSLADKVIDKLAKDYDEKMSVIDDEQRKNIEKVLYLQVLDGA
                     WREHLYQMDILKTGIGLRGYNQKDPLTEYKKESYNLFMELVNRLKNESIKTLQIVRFK
                     TEDDENTDRALEKMQDEANLQNKFEKKPARNEPCPCGSGKKYKDCCGKSGPKKGVFA"
     gene            12360..12875
                     /gene="lolA"
                     /locus_tag="RPW04_000303"
     CDS             12360..12875
                     /gene="lolA"
                     /locus_tag="RPW04_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005870579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HDX6294423.1"
                     /translation="MKKFIIILAIAISVFGANELDFNTLSSNFTQTVTSQNKKITYTG
                     YFVAHKEIGAFWHYKTPATKLIYFNYGRVTILEPELEQAILTDLKDSPNLTEILRAAK
                     KVSNNEFKAVYDDTSYNIKVKNSLPSEISYSDKLGNIVKITLTNTRKNEPINTGILEP
                     NIPENFDILAN"
     gene            complement(12921..13391)
                     /locus_tag="RPW04_000304"
     CDS             complement(12921..13391)
                     /locus_tag="RPW04_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294424.1"
                     /translation="MRKPILFVLFCVSMIAGTLRIDNFESDLYSKSGANNMKKISMSL
                     EFIARDENVNESAIYDSLNVVVGSFYAEDLMTSRGKESFKTTLIKYISKKYSLDIDEI
                     YIISLKILNEIDIEKIIKAIKERDLCPTNNGAKNKTDNYNLNLNKDFGKDFGEN"
     gene            complement(13388..14695)
                     /locus_tag="RPW04_000305"
     CDS             complement(13388..14695)
                     /locus_tag="RPW04_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDX6294425.1"
                     /translation="MLNDILNILNDSNLFLTGGGGVGKSYTIKEIISHYKSGFKNVVV
                     LGSTGISAVGVGGVSCHSFFKFGISENFEELKLLDKKQKSKLNELKKILKNCDLLIID
                     EISMVSAELMEMISLRLIWSGFRGRVLLVGDFYQLPPVKKSVQNLLFSFNYAFSSNAW
                     NSLNLTNVELRVSKRTKDISFYKILSKIRIGVIDDEICDFLKSKMVREIPNNITALFG
                     RNYEADRLNEQRLNEINSNLETIVAKTKIYDNSLHSVALQKWISNLNSPCELRLKKGA
                     KVMFLANKWGEYYNGEQGIIREFVKGDDGVEIILVQKDSGEIIGVEPHTYELYDYHMK
                     DEELSQTLKANYMQFPLKLAYAITIHKSQGMSIEKFACNLDNIFANGQLYVALSRAIS
                     ADGLYIQYTKNIDFADYLKKVVKIDNEVSDFYRNSKFIKENNI"
     gene            14753..16693
                     /locus_tag="RPW04_000306"
     CDS             14753..16693
                     /locus_tag="RPW04_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDX6294426.1"
                     /translation="MKRLVYSVLVLFFVGCAPKIDQIPQPEPILSLKFEQNASILPDL
                     GKSIKANEFELLSKFFSVWNDEIKESKNELMWAFNIYKNSPNKKYYGESKLPRSDEWF
                     LAQKNNANFDKFKSILQPAITIANTEVRDFPTIEKLFLDPSKAGEGYPFDYLQESVLG
                     AFHPLLVSHFSKDGAWAFVKSDSLWGFVRSKDIKLLTKSKADEFQRYKFAVFTKDNEA
                     IKDENGNFLFYSRIGSIFPYDSEDYFSFKFKNNFTISKEYAKQFQTINSQNLKTTLNE
                     LLGQNYGWGGENKLRDCSLFIKDYFSSFGVWLPRNSKAQGQIGRVINLKNLTNNEKKD
                     MIKKYAIPFLTLLYMPGHIMIYAGDINGTLTSVHDSWGIKTKDNGRAMIGKIAITDLE
                     IGKGNESISDEALLLSKITSMNIIIQDEKSAFQNGYGVKIEDNKVIFDDNSSMIFDDG
                     KQKTYDELIKRPSIKDMLAYDYPLLEPLDAKLIDAGRFRNEQFFSKIYGKTKNEVQSN
                     LIDVVWLKNSVNKTFKFNSKNGAAKALQKVSDELDFMVKNNPNLLKYLDNPAGTFNYR
                     KISKTDLLSAHSWGIAIDINVNMSDYWQWSKDGKYHNNIPKDIVEVFEKNGFIWGGRW
                     EHFDTMHFEYRPEFSQIWLNKG"
     gene            complement(16711..17865)
                     /gene="ftsZ"
                     /locus_tag="RPW04_000307"
     CDS             complement(16711..17865)
                     /gene="ftsZ"
                     /locus_tag="RPW04_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDX6294427.1"
                     /translation="MGGFTVEENKNIYGAKIKVVGVGGGGGNMINHIVREGINNQDGM
                     RSVDLIAANTDAQALEDSSATTRIQLGEKKTRGLGAGMVPEVGKEAALESYEEIKTTL
                     EYSDIVFIASGFGGGTGTGAAPIIAQAAKEVGALTVAVITTPFAFEGKKRMRLALEGI
                     EELKKECDSIVVIPNQKLMGIIDKKAGIKDSFKEVDNILARAVSGMSSIVLSSGKSDI
                     NLDFADVRTAMSHRGLSLMGVGEADGEEAAQEALKNAIQSPLLDDMNIKGAMGVLVHF
                     RFHPSCPMSDISEAMLIVEDSADADADIFFGTLTDDTMEEGRVQVTLVATGFYDKNST
                     KQPEAAPVPEAVQEKREQNIFGAYRRASGYDVNVNSDDLDIPTVSRFKLD"
     gene            complement(17879..19363)
                     /gene="ftsA"
                     /locus_tag="RPW04_000308"
     CDS             complement(17879..19363)
                     /gene="ftsA"
                     /locus_tag="RPW04_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDX6294428.1"
                     /translation="MGTKILGIDIGSTQICAIMAECENSSTRSDNAIKVIGMGSVKSQ
                     GLKKGSITNIELASNSIKAVVNDVMRIAGTKFDKVIVSISGKDAKNIDCKDVINIPER
                     EVNIKQIERAISSAEYKVKIPHDYEIIHTLPYNFKIDEQDNIEDPLGMNGTRLEVQAH
                     IIVVQKSAVMNLRKAIKKAGLKADNIVLSGYASAIATLNEDEKALGAVLIDMGGASCN
                     MVIHSGNSIRYNEFLGVGSSNITIDLSTILHTPPTVAEDIKVKYGTLKNQGNELIVLP
                     DLGDENSSHEVDISVITKVIYMRVEETLMILAKMLSESNYKDLAGAGVVLTGGMTKLD
                     GLRELASAVFDSMPVRIARPREFESSIDVFKDPANSCAIGLCLYGAGYFTPYEIDSER
                     KLRYKDEPMIKNRGLISVKEMDEKRDQVLHSDTKDKFDKDYEIYEGIEDEISINTQNN
                     DLKGIDLKIENDDSIKNDVGAKRIDMADSINPFSKFINYLKNLF"
     gene            complement(19369..20826)
                     /locus_tag="RPW04_000309"
     CDS             complement(19369..20826)
                     /locus_tag="RPW04_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDX6294429.1"
                     /translation="MLTWMQKHKKYLVVTIWISTIAFVGAGFVGWGAYDLNSNRATSV
                     AKVGNRNITIQEFQKTYSNLYNYYSSLSEGKFTQEQADEMGLDRIALQRLIQENLFLN
                     YVDDIGLMVSKEELIAALTSDEGFQVDGKFDKSRYEDTLKRARITPKDFENELTNKLL
                     LNKFFDAINLKTNQTDLDILASSYFMEDKVSINIIKADKNSISVDENELKDLWEKSKN
                     RYLTKSKFELQTKFIPQTNIDVNDTVLEEFFEENRGNYRDGFDKLLTFDKAKDDVKYD
                     YELKQARKTALEEYLKIKKGESNATTAVTVLEDNEDFPINELRDAKVGDVLKPFEYKN
                     GYMIAELVGKNMPEVMSYEEAKDALTKVYMDEKGKKLLEEKAKQSLNNFSGKDIGFVS
                     RDTKKSIDGLSETEYLTFIMKLFESPNKNGYVMLDTKAVVYSILEQRLLNLDKVKEYN
                     ALLSQNASAIKNGQLERDLLDALQKRYKIEQYYKR"
     gene            complement(20947..21540)
                     /locus_tag="RPW04_000310"
     CDS             complement(20947..21540)
                     /locus_tag="RPW04_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase and adducin N-terminal
                     domain-containing protein"
                     /protein_id="HDX6294430.1"
                     /translation="MNIEYSMGEIKKISASMFKKNFFGIFHGSISARIEHNQFVINKK
                     DAIFDGLSNDDLTLLYSKKDYRWNDASIDSDIHLNIYKNIGEAKYICYAMPPYLTAYS
                     MDHITIEPRDYFGYMKFDNIFIYDIKQFDDWYERAPSEICRYMIEKNSNIMVIKGYGV
                     YVYERTAYDLAKTVALLENSCKMINYASRFQNLNLGL"
     gene            21649..22572
                     /gene="rsmH"
                     /locus_tag="RPW04_000311"
     CDS             21649..22572
                     /gene="rsmH"
                     /locus_tag="RPW04_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDX6294431.1"
                     /translation="MDSPHIPVLLKPVLNSFKDIKNGTILDCTLGYGGHSEAILISNP
                     NLKIIACDRDSESLSFCKAKFEKYSDRIKIYKSNFAGILNKIDHEDIRGILADIGVSS
                     LQLDLDERGFSINSNNLDMRMDKNQTFSAKELINSYSKDQLADIFYKYAELPNAKSLA
                     QKIVDARDKSPIKSAKELSSIIGRSNLKNRSVSIAILAFQAIRIEVNKELDELNNLLN
                     LIKSSKINNAILDIISFHSLEDKIAKSTFKEWEKSCICDNFVMKCECGNNHSIGKILT
                     KKPITPSEDEIKQNPRSSCAKMRIFHIQRNV"
     gene            22569..22850
                     /locus_tag="RPW04_000312"
     CDS             22569..22850
                     /locus_tag="RPW04_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294432.1"
                     /translation="MSDKDELLQRHDEELKKEHNLNFQSLMAAYFMLLLILCVTIPKI
                     YISNEIYYTSRDIAELKNKLNVLLEENKVLKAKLEKIRYKNQIIDNMSY"
     gene            22850..24811
                     /locus_tag="RPW04_000313"
     CDS             22850..24811
                     /locus_tag="RPW04_000313"
                     /inference="COORDINATES: protein motif:HMM:NF024905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HDX6294433.1"
                     /translation="MNIAISKFIKTYDPANFAFSFALKASISMIVCGCMAYYFFGVYG
                     AIFAANASMNLFFINSLDGSDFTKIKYFFLYVVLASMFLPFAKLAYEASWLLFLPTFI
                     WMLFVGLSSLFNQNLNKILSIVNISGLVALIAQSSGDLEVKNSIFGIIIGGIIASIFR
                     IMHIGTYGKFTKKTYNLLLEDLMDMSKNLFNTKNFEYSSAECEKHIEAIKKIFANQSS
                     NLKDERIIIHHARAIFYLYKSEDIFHSLIAIKRYFGTIKDENLLKEIQDEITHNLKEL
                     KNIFNDKNAYIKTDAIDKLNDTQYLIFRASLNVLYSKFWLIKNGGEDKIKLENAKEKS
                     IKMIISDINLKNPAVQNSIKLALGVSIAILIAQLTQINHGVWIAIGVLSVSRASSYMT
                     KVVGFNNIKGALIGVCLGLVLIYFFKTNYIFIPIIIISIFLTFYLKNFPTIYFTSMFM
                     LAFTLIFSVIKTDFIDLIIFRVTDILIGFFVAFGVTVLFFRRSTELKLSSNFDTLIKK
                     LDILAKSIYNQKGKFVVKENSVLIALSGYKTAVLENDRSKNFKIYLEIYKNLYEINSL
                     LINLKDYIKSIQNKDKFDIIEAHFNSDMNIIITRFEMIGKKLNKLPYYFYDDVEDKLI
                     CNDEKISYLLKIIAEKQAKIMANTELFIR"
     gene            complement(24797..25303)
                     /locus_tag="RPW04_000314"
     CDS             complement(24797..25303)
                     /locus_tag="RPW04_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009293691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294434.1"
                     /translation="MLEKLRKFIFKKLFIVSKQPVLFKDLLEANCLFNEGMLVDPSKL
                     NFRFRDGRLYIIYGILCFIILAAAIIILHKIFEKIDFHYSIIGTMIMTALVFIGFDFF
                     KVWARKSISHELIKKAWDIHFPYFPYEKYSQKIEIIYNEAIKKEIPRKDLEKYVLDQL
                     VLRVSSDK"
     gene            25399..26271
                     /locus_tag="RPW04_000315"
     CDS             25399..26271
                     /locus_tag="RPW04_000315"
                     /EC_number="2.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino-acid transaminase"
                     /protein_id="HDX6294435.1"
                     /translation="MAAGDAENIVYLNGEFLNKNDAKISIFDRGFIFGDGIYEVVPII
                     NSKLVDKEDFWDRFQRSLKAIELELPIDKDEFEKILYALIEKNSVKEGGIYMEVTRGV
                     SEREFKFIKGLKPTVMAFVYQKEIFNNEYAKTGIEIISTPDIRWKRRDIKSISLLAQC
                     YAKNEAYKVGAYESFMVEDGFVTEASSSSAFIIKDDTLITKPLSNEILPGIRRKVLLA
                     LANKAGLRVEQRKFTMDEVYNADEVFISAATLILLPVIKADGKPINNAKIGKYSPKLR
                     ELYIERLKKEAGLM"
     gene            complement(26329..27921)
                     /locus_tag="RPW04_000316"
     CDS             complement(26329..27921)
                     /locus_tag="RPW04_000316"
                     /inference="COORDINATES: protein motif:HMM:NF012245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDX6294436.1"
                     /translation="MRTNTIGKKIALSMIAVLFISFVVMQFIIVGQFNNSATQTTKNN
                     LDMLSKSIFQTVQAAMNTGDPVMIEKSVKDAGTIKGVSSIEIFRSDDLSDGFGLEKVV
                     PKDDIIKKQFSNPQNLTFDLKEKGDHKLRLVTPLVAKQECLSCHATVKEGDVLGVMDL
                     SYSFNEIDADLRNKSLIFSLIFVVSLIVTTLVVLLVLKKVVICPVLELLSRAKDLASG
                     DGDLSARIIVKNDDEIGQSCKNINIFIEKIQGIVKAAQGSAKSVENETINLNTNASML
                     SNSTEAGKLQAKNSFEVSKSVSDELDISREIANKAASANKKSYDELDDMINSLNDVVN
                     SLNDTNTKEQEIAERTNLVVKQTEDMRKILDMIGEVADQTNLLALNAAIEAARAGDMG
                     RGFAVVAEEVRVLAERTNDSLKDIDSNAQNMIKAVRDLGSSLNENAVHIASLSDEANS
                     LMDMARTTQSTTSESMRLANEVADKTTDINSKIESLLEQSKESVTILDNNTKIASKFI
                     SASQSLKEVSLDLENNLNKFKT"
     gene            complement(28011..28292)
                     /locus_tag="RPW04_000317"
     CDS             complement(28011..28292)
                     /locus_tag="RPW04_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002946874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HDX6294437.1"
                     /translation="MKDKIYGELKKIIDPEIGFDIVSLGLIYDVEVSGDKAVITMSLS
                     TKSCPLHELILSWVEEAVLRVVKECVIDLVWEPAWNIDMASDEIKAILG"
     gene            complement(28289..29470)
                     /locus_tag="RPW04_000318"
     CDS             complement(28289..29470)
                     /locus_tag="RPW04_000318"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M50"
                     /protein_id="HDX6294438.1"
                     /translation="MAKLLSTFAPPFKLVGAYFVISIVFAIFSVFLYKFSDFDVLLNL
                     QTATFLHIFLVGFVISIIKGSIYQLSSVILNRAFFTLKGAYINVFAYTLALILFLNGM
                     FFENTLLIYLGSIILFLSLLYFDICYLLSFLNLKISSFSQLCLFVSAIMFLMGICLGM
                     LLVLIMFGWLDVDFITILRFHLYFVFGFIFFTVIGASSVLLPMFSLAHNVNFGLFYAS
                     FTLYISGFFLIWFLLDGALKVILSAAVLAILQWILILKNRVRRAYDYWNLNLIFSFFM
                     LGFSIFAYSFLNLNLAVFTLFFGFLYPFIVAHIYKIMPFLIWYHYISKFVGKLKIPNL
                     EDMIMKKTAYFGLIFNMLAIFFIFFKFEYLAQVFMLVSVILVLVNMINFLRYINFGVK
                     L"
     gene            complement(29463..29807)
                     /locus_tag="RPW04_000319"
     CDS             complement(29463..29807)
                     /locus_tag="RPW04_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005871273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294439.1"
                     /translation="MNYFENWQKIKADGASLDFYKKTENQTELIGFDSSRCIPPEPMV
                     NAVIALNFIKDKNIKVVMINHKFPAGLIPKIEDKFDYTSESLEDGNVRLIFSLKDGAQ
                     SSLLDTKCECHG"
     gene            complement(30007..31539)
                     /gene="purH"
                     /locus_tag="RPW04_000320"
     CDS             complement(30007..31539)
                     /gene="purH"
                     /locus_tag="RPW04_000320"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDX6294440.1"
                     /translation="MRALISVSDKSGIEHFAKGLESLGFEILSTGGTYKTLKEANLKV
                     VEVSDYTKSPEMFEGRVKTLHPKIHGGILHKRDDASHVKQAGDFGIGAIDLVCVNLYP
                     FKETTIRTDDFGEIIENIDIGGPAMVRSAAKNFKDVIIVTDVNDYDTVLEALKTSSDS
                     YEFRLGMMIKAFEHTASYDSMIANYMNDRFKGGFGEKRFISAAKVFECRYGENPHQKG
                     AAYEFDSFLSLNFTQLKGEASFNNMTDINSAVSIASSFGDTPAVAICKHANPCGFAIG
                     KDVLDSYEKALKCDPVSAFGGVVAINGTLTKELALKTKEIFIEVIIAANVEDGVLEIY
                     SDKKRTKIFTQNNKYLVQSGDKWDFKHIDGGFVFQEKDYVSDDEIANAKLVTKKQADV
                     SELNDLKIAWKIAALTKSNCVVYVKDAMLLAIGMGMTSRVDAARAAVTKAHDMGIDLR
                     GSSLASEAFFPFRDSIEIASKVGVKNVIQPGGSIRDEDVIAAADESGMSMYFTGIRHF
                     LH"
     gene            complement(31567..32307)
                     /locus_tag="RPW04_000321"
     CDS             complement(31567..32307)
                     /locus_tag="RPW04_000321"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012451.1,HMM:NF016955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HDX6294441.1"
                     /translation="MHIFIIIAIVVAIFYILSKSYIKKPTVNFGGNFDNRSFDILDAK
                     FFVRLIAKVAKSDGVVSKEEAYYISLIFDDICNKLKNASIRYELKETYEIEKNSSNTA
                     FSIALEYKTKLKLSEQACVNIVMFLLNLAYIDGEFNSAEKEILNEVCDGFGIGKFIKD
                     TLFERFESEFRNKQSNQNTTNKDPYEVLEINKDASFDEIKKQYRKLAKQNHPDFLMGA
                     DEKVISNATKRLQEINEAYADLKAKFGK"
     gene            complement(32307..34502)
                     /gene="purL"
                     /locus_tag="RPW04_000322"
     CDS             complement(32307..34502)
                     /gene="purL"
                     /locus_tag="RPW04_000322"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004320296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HDX6294442.1"
                     /translation="MDKKIVKAHKISDSEYAKILEILGREPNLLELGIFSAMWSEHCS
                     YKSSKKYLNGFPTKAPWVIQGPGENAGVIDCGDGVAAVFKMESHNHPSFIEPFQGAAT
                     GVGGIFRDIFTMGARVEASLNSLRFGEIRGEDPLNRHQRYLVKGVVGGIGHYGNCMGV
                     PTVGGETTFDPSFNGNILVNAFALGICKKNEIFYAKAEGVGNPVIYVGSKTGRDGLGG
                     AVMASDSFNEENKSLRPTVQVGDPFAEKLLMEACLELFKQDYIVGIQDMGAAGLTSSS
                     FEMAGHSSSGMKMYLDKVPMREDGMTPYDLMLSESQERMLICAKKGCEDKIKEIFAKW
                     DLSAEIIGEVTDTGIMELFWHDELVGSIPIDPLSEAAPVLDRAVKRPAYLGEIKDLNL
                     ENYPKFKNQDAFLKLLKDPNISNKSLIYDQYDANIGTNTIKKPGNLGAAIIRIKENGR
                     AISMGMECNTRHNYVNPKIGAAAAVAASGRKVAMSGATPLAITDCLNYGNPQNPEVMW
                     QFANGCEGIKEACAALQTPVVSGNVSLYNETDGVSVQPTPAIVTVGVNENADKSLNSI
                     FKNSGTAVYLLGDTSGEFGGSLYVNALYGVCKGELKEIDYKKERALWDLVIEANKIGI
                     LEFANSVGVGGVAMTLAKMSAVSNLGFDGECKFDDSKWIFDESFSRAVVGVKDESKFK
                     ELADKHSVKFEKIGLSTGEIFRLNDIKINLNELKNIYFNEFSKITKSED"
     gene            complement(34521..35837)
                     /gene="mnmE"
                     /locus_tag="RPW04_000323"
     CDS             complement(34521..35837)
                     /gene="mnmE"
                     /locus_tag="RPW04_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDX6294443.1"
                     /translation="MNIVALASAYGVGSISIVRLSGDGAYDLAINLCKKPLTPRYAHL
                     RKLYCENMVFLDEAIVIYYKAPFSFTGEDVVEFQTHGGVVVANLIIDELLRLGARVAN
                     PGEFSKRAFLNGKMDLVKAESIQSLINARSEGAAKILARTMNGELSVFVNSLRDELIK
                     ILAYTETCIDYADDDLPSDILHSSKDLLLNSYKKLEHIINISNSKKGLIDGYKVAIIG
                     RPNVGKSSILNSLLHYERAITSETAGTTRDTIEEQIKFGSHLVRIIDTAGIRDEFDSS
                     IEAAGIEYSKRAAREADIIFCVFDSSQKASLEDRQILEFISNLNKKTIYVLNKSDLEF
                     KFDISLNAVLVSAKLDSTPLSKELESYLNSQDTNDIMLSSNRQIEASRLASEAIKNAL
                     ELLNESELELFAYELNIALKHIGSITKPMENSELLDKMFSSFCLGK"
     gene            complement(35834..36787)
                     /locus_tag="RPW04_000324"
     CDS             complement(35834..36787)
                     /locus_tag="RPW04_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Jag N-terminal domain-containing protein"
                     /protein_id="HDX6294444.1"
                     /translation="MSVKIEAKDLQSAYLKAAEELHCSVTDLTDIKIIQNPSRGLFGL
                     FKKDAIIEANCSSLRKHHDSKNSFKESKNDSFEYKKDRKKRSTKYQNDKFEKNDKQKV
                     EKPTKPVNISNLEDKKEPLEIHKEVKEILHEPKTKRLEIDHSIFDTFHKSDDAKNSPT
                     RLKLKPNDCIDEIRSGLEKLFKASCFEIEISDVSEFDNETLFIKLDGADAALLIGKEG
                     YRYKAISYLLFNWINSKYNLGIRLEIAEFLKNQESGIAAYLSGVIDRVETTGRAQTKP
                     LDGVLVKIALEQLRQRFPNKYVGIKSGDEGRYVVVNDFYKK"
     gene            complement(36777..38372)
                     /gene="yidC"
                     /locus_tag="RPW04_000325"
     CDS             complement(36777..38372)
                     /gene="yidC"
                     /locus_tag="RPW04_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012857163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDX6294445.1"
                     /translation="MLDKLSTQKRLLIATVISILFFITYDYFFIPKRTVDINQTASYA
                     EQNSSSANSAPASQDSINASDSAAPVTSNASKNIVQISGKTYNATIDELGRISSFVLN
                     ESKFKDENDKQISLVSLNHSPLPLEIRFSNKDLNEEAFKVAYTSSAETIDVTKSPANV
                     VLTQALNGVTLTKTITFYPDGAYDLKVKLSKNEDYFITPGFRPNVVVDGYTVHGTLMR
                     KSDGSLEIIEDKKAKGDERFTGVDILANSDRYYTTLFYEVDKTLDVYIQNDSAENTLS
                     FVKSSGSFSTKGYIGPKDHKILKSIDPNLVDVIEYGWFTFIAKPMFLLLSWLHNYIGN
                     WGFAIVALTIVIRIVLFPLTYKGMVSMNKLKDLAPKMKEIQAKYKGDPSKLNAHVMEL
                     YKKNGANPMGGCLPILIQIPIFFAIYRVLLNAIELKGAPWIFWIKDLAIMDPYFILPV
                     LMGATMFIQQKITPANFTDPMQEKIMKFLPLIFTFFFVTFPAGLTLYWFINNLCSVAQ
                     QLVVNKIFKKQKEQAIMEKNHER"
     gene            complement(38372..38710)
                     /gene="yidD"
                     /locus_tag="RPW04_000326"
     CDS             complement(38372..38710)
                     /gene="yidD"
                     /locus_tag="RPW04_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDX6294446.1"
                     /translation="MKVIFWNFIVFYKKYISPILPKSCRYYPTCSEYALWQLRYNGFF
                     YSIVAIFLRILRCNQLFRGGIDYPLVKRKFTPYTIFSKNKPCKMNFWFVPHRKGGFYL
                     IKVFDSLKET"
     gene            complement(38707..39039)
                     /gene="rnpA"
                     /locus_tag="RPW04_000327"
     CDS             complement(38707..39039)
                     /gene="rnpA"
                     /locus_tag="RPW04_000327"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDX6294447.1"
                     /translation="MIIDRFSSISDSKEFIRVYQGAKKWHFECAVIYFLESDTTKFAA
                     VASKKVGKAVVRNRIKRVLRSAFFNFSSELKDGIYILIAKAGLEKMPFDKVEKNLKWA
                     LKKVDSIK"
     gene            complement(39060..39194)
                     /gene="rpmH"
                     /locus_tag="RPW04_000328"
     CDS             complement(39060..39194)
                     /gene="rpmH"
                     /locus_tag="RPW04_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDX6294448.1"
                     /translation="MKRTYQPHKTPKKRTHGFRGRMKTKNGRKVINARRAKGRKRLAA
                     "
BASE COUNT        12937 a         7119 c         5653 g        13636 t
ORIGIN      
        1 aatagatttc tagttctatt ttttatagtt tgaattctgg cattagccac ctttatatca
       61 aaaagttcaa acacgcctaa aatatacgcc ataagccctc tttggtcttt tgcatttata
      121 ttcattttag cataaatttt tgaatgattt agatcaaaat ttacctcatt ttctaaaatg
      181 agcggctttt tcgtaagtgc tttttgtttg tcacataaag cacctataat gagagtttcc
      241 atatttttca tttcgctatc gctggctttt tgattatatt ctagttttat aaaaaatttg
      301 ctatcaaaaa gctcgaaaat ctccatataa gcaagatcga gatgagctaa tttatttaaa
      361 accatagttg tattccaacc tcttttggca atgattttaa cacagaaatt atctctattt
      421 tctatatcaa ctgatatatt agagcagttt tgagcccata aaaatatacg tattatctcg
      481 cttggcgggt atttgataaa aagtaaattc gaagatatag aaagaattat attttgctcg
      541 tctttagata gttccaaaaa ctctttttgt ttttttataa gattctcttt tttaactctt
      601 ctagcagctt catcaagtaa attctcatcg ctattatcaa aactttttaa cgctatttca
      661 taaagctctc taaggagctt tgcattatac gagttgtaaa atccatcatt tgtagcatta
      721 cttatgcaat aagtaagtat ataaagcagc ttaagagctt gtttttctcc tatatgagag
      781 ataaaattca agataacttg ctggttatag atatcttctc tatttgcgat attattcata
      841 atagtgtggt tttttattaa atttactccc atatttatag ctttttgcgg cagccctatc
      901 ttgtttgcat aagctctaaa tatatttgct cctatatttg aatgatctcc tactaatcct
      961 tttccagcat catgcatcaa agccactagt ttcatcaaga tttttccatc tgcacaaaga
     1021 tcgctatgaa ggctttttat aaaactatct ttgatatttt caagatgata caaggcaagt
     1081 aaactatact catccacgct atatttatga tacccgtcaa gctgagctag atgccttgta
     1141 tgttccatag gttttaaaag taaaaacaga agctcactat ctaaaagtgc ttttaatata
     1201 ccaaaacttc tatctctata aagtaatttt ttgaattcta ccaaggattt ttcaatggac
     1261 tctttttgga taattgtacg ttttaagtaa aaaatcgctc ctatatcaaa tttcaaatca
     1321 atatccggaa gcatcaaaag atctctcact aaatttaata tatcttttgg ttttttatga
     1381 atcggagcgt aaatagtatc atttatatta taaaatccgt tttcaagtct taaaactctt
     1441 ttttgagtaa aatttaaacc gctatcaaag aatcttctaa aaacagtttt agcaagatat
     1501 cttgagtaaa tatatatagt atgcatagac gataaagtct ttaccataag caaaacttcg
     1561 gcgctaagca tctttttttc tttagtctgc ataacactgc ttacttcaga cagatactcg
     1621 cttttaagct catcatctcc gccacttatt tgcaaagccg atcttagcga actgataaaa
     1681 tcaacgctta aatttaactc gctgatctct ttttcactta taaatttaag cgcgtgcgac
     1741 tttggactat tttcatcaac agaatttaaa agccaaaaaa ctcttttaaa gtcataaaat
     1801 ccaccatagc cgtttttaat atctggtttt tggcttaata atttaatctc gtcaaatgga
     1861 gtaagtttac ttaaatgaaa tttaataaaa tcatcttttt tatactcttt taactcaaaa
     1921 attttatctt tagtcatctt ataaagctgc tttgatgcac atacataacg cacttgataa
     1981 aacatagttt taagttctaa atcgtctttt atagcatcaa aaagctcgtc tatctcataa
     2041 tataccggat taatatctaa atttatatct ttaagaaatt taatataact ttttactata
     2101 tcttttacat tgtagccagc tacgttttta taagatataa aaaaatcgat atcacttcta
     2161 acgctcattt cacttaaagc gtaacttcca agtgctataa cagatatagg aagctgctca
     2221 tcatcgggag caaattcacc aaaatagctg atcttagtag cctcaaaagc gcatttaaaa
     2281 aatttatcta tctctttgct ttgataagta ccaaagcttc taccacctaa ttttataaac
     2341 tgctttttaa gggctttttt gcactttaaa actccgtctt tacagctagc aagtacgcta
     2401 tcttcgtctt tggattttaa aaatttaatg ctgcttactc tacccatttt attcctttgc
     2461 caaaatttta tcaaaaattt ccaaaaaaaa agctttttta agccctatta gcatataatt
     2521 gtctcttaaa tttaaaaaaa ggtaaaataa acatatatga atctactaga taaacttcaa
     2581 aacaaaaaga ggttgggatt cgacgaaggt ttaatgttat atgatttaga tctttttact
     2641 cttggaaaat atgcaaatca aataagacgg aaactcaact ctaacaaagt ttattttaac
     2701 ataaacaggc atataaatcc tacaaattta tgcgcagata catgcaaatt ctgtgcattt
     2761 tcagctcata gaaaaaatga taacgcctat acaatgactc acgaagagat aatgaaagca
     2821 gtagacgaat ctgtaaaaaa cggcgtaaaa gagatacata tcgtatcgtc tcacaatcct
     2881 tttgtaacgc cgcagtggta tctagaaata tttaaaatga taaaacagaa atatccgttt
     2941 ttgcatatca aagctatgac cgcagctgag atagactatc taaaacgaaa acacggtctt
     3001 agttatgaag agactataga caaaatgata gaatacggag tagattctat gccaggaggc
     3061 ggagcagaga tatttgatga agatatcaga gaacaaatat gcaaaggcaa agtaagcagt
     3121 aaaaactggc ttttaatcca ctctttatgg cacaaaaaag gtcgtcaaag caatgctaca
     3181 atgttatttg gtcatataga aagccgcgct catagaattg atcatatatt acgaatacgg
     3241 gatctgcaag ataaagccat caaaaacgct aattcgggcg gatttaacgc ttttatcccg
     3301 cttgtttatc aaagaaataa taactactta aaagtagatg aatttttagg ttcggctgaa
     3361 attttaaaaa ctatagctat aagcagaata cttcttgata acattaaaca tatcaaagcc
     3421 tattgggcaa cttctacttt aaatttagca atggtagctc aagagtttgg cgcagatgat
     3481 ctagatggaa ctatagaaaa tgagagtatc caaagtagcg ccggagcaaa aagcaaacac
     3541 ggaaaaagta aaaatgaatt tatagagctt gtgcaaacaa gcggatttat ccctgtacaa
     3601 agagatagtt tatacaacga attacaaatt tacaactaag gaggcgaagt ggattatttc
     3661 aagcttaaag agagtaacac ttcagtaaaa caggaattta acgccggact tacaacattt
     3721 ttagcaatga tgtatatagt gccggtaaat atgctaatta tgagcgacgc cggtatgcca
     3781 aaagaagcac ttcttacggc tactgcggtt ataacgataa tatcttctat atttaatgga
     3841 ttttgggcaa atactccagt tgcgctaagc gtaggaatgg gattaaacgc atattttact
     3901 tacgggcttg ttataggtat gaaaatacct tggcaaaccg cgcttggcgt tgtgtgtata
     3961 agtgcgatta tatttgtcat tttgagcttt actaattttc gaatttggat tataaaaaat
     4021 attcctatag atttaagacg agccataagt gccggaatag gtgctttcat ctgcttcgtc
     4081 ggacttaaac agatgggtat tatagtagct agtcctgcta ctttagtcgc aataggaaac
     4141 gtatctgatc caaaagtttt tataggtata ttaggtcttg ttttgatagt tgctttttgg
     4201 gctttaaaac taaaagccgg atttatacta gccgttgttg ccacatcgat gatagcatgg
     4261 atatttggag tttatcaagc tccaaatgag atattttcag ctccggcttc tttatctcct
     4321 atatttggcg aacttgatat attaagcgct cttaaactct ctttacttcc tgctatcatt
     4381 acatttttta tcactcacct ttttgattca ataggaactt taacaggagt ttgcaataga
     4441 gcaaatttat ttaacgacca cgatgaggaa ggaacgaaaa aacttgctaa aaatttagaa
     4501 agcgacgcga tatctagcgt agttggctcc atagtaggaa ctagtacgat aactgctttt
     4561 gcagaaagtg ctagcggcgt agaagccggc ggaagaacag ggcttagtgc agtttttacc
     4621 ggaatgctat ttgtattaac tctatttttg ttacctttat ttggttctat accatcaaac
     4681 gctatttatc cgatacttgt tatggttgga gttcttatgt ttagtgaact aggaaaagtg
     4741 aattataatg atccggctat atgcgtatca acgtttctaa ctgttatttt aatgcctctt
     4801 acctactcta taaccgttgg acttagtata ggttttatct catattttac agttaaacta
     4861 gttctaagaa aatgggaaga tataaactta ggcattataa cattaacgct tataagtttt
     4921 ttagcatttc tagttacgtc tgctccatcg ttttttggcg agcttatcgg tataaattaa
     4981 ggagattaaa tgatatttta tgactatgaa tcatttgcaa aagatataaa aataatggca
     5041 aaaaatataa aaaacgaatt tgatccggac gcaattttag gtatagctag aggcggttta
     5101 actcttgctc attctcttag cgttgcatta aacaatagaa attgttttag cttgaactcg
     5161 gttcattatg aagatacaaa aaagcttgat actataaata tttttaatat cccggacctt
     5221 agcaaattta agaaaattct gatagcggat gatataatag acagcggtga aagtatgatc
     5281 gctataaaaa aagaactttt aaaaaaatat ccgaatttag agataaaagt agcaactatc
     5341 tactacaaaa ccaaagctct tttgctacct gaatacagcg taaaagaggc acatgattgg
     5401 gtagagtttt tctgggatat aaagctggat taaactatga ataaagtaga actgctaatt
     5461 atgtactttt gcacaggact tacgctttgc gtgttgtacg caactcagcc tataggtccg
     5521 gtatttgaaa aagaactgag cattacaaga acacaagcta ctttatttac aacttctatg
     5581 atggcgccac tagcatttgc tagtatattt tatggatatt tactagaaaa aatcgagata
     5641 aaaaaactgc ttgtagtcgc atttttgcta cttgggggaa gtgagataac atttagtttt
     5701 acaagctcat atttttggct tttaaatatt cgcggatttc aaggacttat agtacctgtg
     5761 gttttaacag gaatcatgag ctacatatct caaatttcta ccaaagaaaa tgttacaagc
     5821 gccataggag catatgtcgg agtcactata ataggcggat ttttaggtag atttttaagt
     5881 ggattattta ccgatatttt tgggtggaga atcttcttct tattggttgg aatattgctt
     5941 ttaatggctg cttttttggt ttttaaattt agtagtaaca taagcgctag ccttataaag
     6001 ccaaaactca aagatatagc tcatatttta aaaatcaaac acaatttata tatttatctt
     6061 atgatatttg gtatattttt ctcatttcaa gctatactaa attttatacc gtttgagctt
     6121 gcaaatttag gcaatgaata tagcggcagt aaaacaggta tgatgtattt tggatacatc
     6181 ataggcgtat tagtagcatt taattctaaa aaaataatcg ctatattaaa aacgccttta
     6241 aatgcgataa taatcggtat aatcatattt ttagctgcac ttcagatatt tagatttgaa
     6301 agctttttag taatgttttg tgcaatgttg gttttttgtc ttggaaattt tatcattcat
     6361 tccatagcaa gcggatttat aaataaatta gcagattcgc acaaaggtat ctcaaacggt
     6421 ttgtacgtaa gcttttatta cgcaggtgga gctcttggaa gttttatgcc tagtttttta
     6481 tatatagcgt atggatgggg agctttttta agccttatca gtgttattag cgccgtatcg
     6541 ttaatgtttg tatttgcttt gcgacatgaa aagtattagt atttttaaaa atgagttatt
     6601 tttgctattt agcgctatta tatttaatat tttactactc atttatagtg tttcaaattt
     6661 aagcataagc tacaacgaag caattattta tttccaaaaa acaaacttct taaccatagt
     6721 tacaaatgct tctactatgt tgtttggacg caatgactat gctttaagac ttcctttttt
     6781 gatcttacat tttttaaata tatttttgat atataaagtt tcaaagccta tattaaaaag
     6841 aaaatccgat agacttattt cggctatttt atatatgttt ttaccaggag tattggcaag
     6901 tgctatactg ataaatgaag ccggatttgt gatatttata actttgctta ttatatattt
     6961 cgaacaaaat aaaatgttta aatcttttat ttttacgctt ttagtatcac ttataataag
     7021 cgaacctttt ataagtttat atatagctat aatatttttt ggaatattca aacgagataa
     7081 aaaattagct attttcgggc taatattttg tttagcatgg ttttggttaa acggtatcga
     7141 cgcttatgga aaaccaaaag ggtattttat agacacgata ggcgtatttg cggcggtatt
     7201 ttcgccatta atttttatat attttatata tacggtatac agaatcgcca taaaagagga
     7261 aaaaactttt ctttggtttg ttgctataac cgctttcgga atctgctcta taatatctat
     7321 aagacaacgc cctagccttg aaatgtttct acctttttgc gtgattttta tgcctgtcat
     7381 ggtacgtacg ttttttagct catatagagc tagactccct aaatttagaa taaaatacaa
     7441 atttattaca attatagtat tgacaactct atttttgaac tcgtctgcta ctatatttca
     7501 taacttttta tatatatttt taaaagatcc gaaagaccat tttgcctata aatacgacgt
     7561 tgcaaaagaa ctcgctcaaa agcttaatga acttggtata agctatgtaa aaacggatca
     7621 aaatttagcc gtaagattga aattctatgg cgtattaaaa ggtaaagagt atattttgac
     7681 taggagtaaa aatgataact gcgaccaaac cgttataaaa ataaaaaaac tcggcaaaca
     7741 aatcgacaaa ttttatctct gtaaaataat ataattatgc tatactacta ctatgaaaaa
     7801 agcatttaca ctaatagaaa ttattatagt attagtcata gtcggtataa tggcgtcttt
     7861 tacgattcct aaattaaaca gaaatgatct tcgtttagca gcagatcaga tagtaagcca
     7921 cattcgatac acccagcatt tagctataat agatgataaa tttgatacaa aagatacaaa
     7981 ctggtataaa ggtagatggc aaattttttt taccaaaacc attgaaacaa aaaataagca
     8041 aacatataat atatttaacg atataatagg cgattctgct ggatttccaa ataaaacaga
     8101 gctggcaaaa aaccctttaa acccatcaaa gtatatgtca tcaggatact ctggtgccat
     8161 tgattctaat agcccagaag ctagtaaaga gttaaattta gaagatacat ataatataat
     8221 aaatgttaaa ctgcaagacg gatgctcaaa acaaggatct cctactagaa taacttttga
     8281 tgaattagga cgcccataca aaggaaatgt tacaagcaat actagacatt ctcaagatct
     8341 tattacaaaa atatgtacga taaaactcac tcatactaat aatgattgca tatttataaa
     8401 agtcacgccg ataaccggtt ttgcgtatgt tgagcaacct gcaaaaaaag ccgattgcaa
     8461 atagctctac tcattcctaa gagttgttaa tatatctacg ttgcttgctt ttttcgcagg
     8521 ataatacgat gaaaatgcga ctataaaaat agcacctata attatcattg ataaatcgct
     8581 caaagatagc tccataggta gtttgctact tccgtaaaca tctgctggta aatttattat
     8641 atcaaaactc ccgagtagcc atacgccaaa aagtcctaga gcaagcccaa acaagatccc
     8701 gcttccgcct atacataatc cttgagtaaa aaaacttttt ttaatctcat ttttactagc
     8761 accaagagca agcaaaagag ctatttcttg tcggcggttc ataacagtca ttaaaagaga
     8821 acttatgata tttaaactag caactaagat aataagcatt aaaactataa aaagtgccct
     8881 tttttcaagt gccaaagcac taaaaaaatt accgttttgc tcccaccagc caactgcttt
     8941 ttgacccggc ggcaagatat cgtttaactt tatgatatct tgttttggat tttgagagta
     9001 tatatgaatg ccatcaaatt tatcatcatc atacccaaga acttttctca aagcattaac
     9061 atctgtgtaa ctatacgctt tatcgtaagc gataagtcct gaactaaagt ccgctacagc
     9121 gttaaatcgc ttcatagtag gaactatagc tagtccagtg gggctgtttt gcataaatat
     9181 aagagtaatt ttttcatttt ctcctagcat aaattcattt tttatgcctt tgccgataac
     9241 tatctcaaat ccagtaggaa tactatcttt tatagcgtct tttataactg agtttatctc
     9301 tttttcatca ttgaaatcca ctccaaatac aagtccaccc tcaagttgag aaccgttttt
     9361 caatatagtt tgagtgctta tatatggact tagttttaaa ttcggaaact tttgccttaa
     9421 ttcatctacg tctaagtttg aaatcgatcc tttaagatga cttaaaatcg ttataggata
     9481 gttcatagta aaaagctttc tttcaaactc tttatcgaac ccattcatta tagccatagc
     9541 gactatcaac accatcaaac ctatgcttac gcctaaaaac gccaaaatag cagaaagcgt
     9601 gataaatggc tgagttttat caaatcttag atattttaat agtagatatt ttaccatact
     9661 aggcaaaaac tccttttttt ggaccgcttt ttccgcaaca atctttatat ttttttccgc
     9721 ttccgcacgg gcaaggttca tttcttgcag gttttttttc aaatttattt tgcaaatttg
     9781 cttcgtcttg cattttttct aaagctctat ccgtattttc atcatcctct gttttaaatc
     9841 taactatctg aagcgtctta atactctcat ttttaagtct attaacaagc tccatgaata
     9901 gattgtaact ctctttttta tactcggtaa gcggatcttt ttgattatat ccacgaagcc
     9961 cgataccagt tttcaatata tccatttgat acaaatgctc tctccaagca ccgtctaaaa
    10021 cttgcaaata cagaactttt tctatatttt ttctttgttc atcatctata accgacatct
    10081 tctcgtcata atcttttgca agtttatcta ttactttatc tgctaaacta tgataatcca
    10141 gtccttttat ctcatcttcg tctatcttag ttccgctctc gccatataca acttcgcaaa
    10201 gtcttgatat atcaaactca tctccaagtc cgccatcaaa tatattgacc tcatctagca
    10261 gagtttttac gaaatcctgt ctatttgata taattttatc ttttaagtca taatctggat
    10321 ttagaagctc atctctatac ttatatactg tttttctttg ctcatttgcg acatcatcat
    10381 actccaatat atgctttcta ctctcaaaat gtaaactctc aactttcttt tgagcatttt
    10441 caacagctct tgttacaagt ctactctcta tactttcacc ctcttctata ccaagcctgt
    10501 ccattatagc ttttatctta tcactaccga atatcctaag aagactatct tcaagactaa
    10561 gataaaatct actaagcccc ggatctcctt gacgtccggc acgtcctctt agctgattat
    10621 ctatacgtct gctttcgtgg cgttctgttc ctataatata aagtcctcca agctctctaa
    10681 cttcatcgtc tattcgtata tcgacaccgc gtccagccat atttgtagct atagttacgg
    10741 cgccttttgc tccggcttga gctattattt cagcttcttt ttcatggttt ttagcattca
    10801 aaacagagtg tgctattttc tctttaacta acattttgtg aaatatctca ctcttttcta
    10861 tacttgcagt tccgactaaa accggctgac cttttatgtt tgatcttttt atctcttcta
    10921 taacggcttt aaatttttca ttttcagttt tatagataag atcatctcta tctactcttt
    10981 taataggaac atttgtaggt atagatataa cttctaactt ataaatttga gagaattcag
    11041 tagcttcagt ctgagcagta ccggtcatac cagagagtct agaatacatt ctgaagtagt
    11101 tttgaaacgt aatatctgct aaagtttggc tctcttcttg aatttttacg ccctctttag
    11161 cttctaacgc ttgatgtagt ccctcgctaa atcttctgcc ttcactaagt cgtccggtaa
    11221 actcatcgac tataataact tgcgaatctc ttacgacata atgaacatct ttctcaaata
    11281 aattatgcgc ttttagtgct tggtcaaggt gatgactgag aatagcattt tctaaattat
    11341 acagattatc caccccaaaa agtttctcgg cttttgctat acctgcttca gttatcatta
    11401 tcgtacggtt tttttcatct actacaaaat ctccagtagc tttagaattc ggaactcttg
    11461 gatcagcagc ttcgcctctt actaactgtt tagcaactac atctgcttgt atataaccat
    11521 caagagtgcg atttgtagga ccacttatga taagaggcgt tctagcctca tctatcaata
    11581 tactatctac ttcatcaacg ataacgaaat tatgctctct ttgaactttt tgaccgactt
    11641 caaatttcat attatcacgc agatagtcaa agccaaattc attattcgta ccataagtta
    11701 tatcgctatt ataagcgatt tttctttttt catcatcata ctcgccactc agaattacac
    11761 ctacgctaag acccaaaaag ttataaattt cactcatttg cgtagcatct ctttttgcaa
    11821 gatagtcatt tacggtgacg acgtgaacac ctttttcatc catagcgttt aaaacgactg
    11881 gaagcgtagc aactagtgtt tttccttcgc cggttttcat ttcggctatt cttccgtcat
    11941 ttaaaaccat tcctcctata agctggacat caaaatggcg catatttaaa gttctttttg
    12001 aaacttctct gactattgca aaaacatcat ttaaaatatc atcttttgtc actttttttg
    12061 ataataaatc gacctttagc ttactaaatt cactcttcaa ctcatcatcg cttaaatttg
    12121 aatatttgcc ctcaagagca tttatcaatg cgacacgttt gaaatatttt ttaatctctt
    12181 tatcgtttct agtgccaaaa attttctttg caatagctgt aatcatcttt taaccttatt
    12241 tcaaatttaa taaactgtta ttttatctaa aaacggttaa atttatgctt tatgcttttg
    12301 ttagcttatt ttaggtaaaa ttataccttt taaaagtact cagactctaa gggaaaaata
    12361 tgaaaaaatt tataatcatt ttagccattg ccatcagcgt ttttggagct aacgaacttg
    12421 atttcaatac gctttcaagc aacttcacgc aaacagtcac gagtcaaaat aaaaaaataa
    12481 cgtatacggg atactttgta gcgcataaag aaataggcgc attttggcat tataaaaccc
    12541 ctgccactaa acttatatat tttaattacg gaagagttac gattttagag cctgagctag
    12601 aacaagccat acttacagac ttaaaagact ctccaaattt aacagaaatt ttaagggcag
    12661 caaaaaaagt ttctaacaac gagttcaaag cagtatatga tgacacttca tataatatta
    12721 aggtaaaaaa ctcactgcca tcagagataa gctatagcga taaactagga aatatagtaa
    12781 aaataactct tacaaacacg aggaaaaatg agcctataaa tacaggaatt ttggaaccca
    12841 atatccctga aaactttgat atattagcaa actaagacta gatagtttgc taagtttaaa
    12901 tttataaata gcaaaaatat ctaattttct ccaaaatctt ttccaaagtc tttatttaaa
    12961 tttaaattat agttatctgt tttattcttt gctccgttgt ttgtagggca aagatctctt
    13021 tcttttatag cttttattat cttttctata tctatttcgt tcaaaatctt aagacttatt
    13081 atataaattt catcgatgtc taaagaatat ttttttgata tatattttat aagagttgtt
    13141 ttaaagctct cttttcctct agaagtcata agatcttcgg cataaaaact accaactaca
    13201 acattcaaag aatcataaat agcagactca tttacattct cgtctctagc tataaactct
    13261 aaactcatgg agattttttt catattattt gctcctgatt ttgagtataa atcgctctca
    13321 aaattatcta tacgcagagt tcctgcaatc atagatacac aaaatagaac aaaaagaatc
    13381 ggttttctca tatgttattc tcctttataa atttgctatt tctataaaaa tcactaacct
    13441 cattgtctat cttaaccact ttttttaaat aatctgcgaa atctatattt tttgtgtatt
    13501 gtatataaag tccatctgcg ctaatagctc ttgaaagtgc gacatatagc tgaccgtttg
    13561 caaatatatt atccaagtta caggcaaatt tttctatact cataccttga gatttatgga
    13621 tagtaatggc gtaagctaat ttcaaaggaa actgcatata gttggctttt aaagtttgcg
    13681 acaattcttc atctttcata tgataatcat atagctcata agtatgtggt tctactccta
    13741 tgatttctcc actatctttt tgcactaaaa taatctcaac tccgtcatct ccttttacaa
    13801 actctcttat aataccctgc tctccgttat aatattcacc ccatttatta gctaaaaaca
    13861 taactttagc tccctttttt agcctaagtt cacaaggaga attcaaattt gaaatccatt
    13921 tctgtaaagc aacgctgtgc agtgagttat cataaatttt agttttagcc actatcgtct
    13981 ctaaattaga gtttatctcg tttaaacgct gttcatttaa tctatcggct tcataatttc
    14041 taccaaaaag agcagttata ttgtttggaa tttcacgcac cattttgctt tttaaaaagt
    14101 cgcaaatttc atcgtctatc actcctattc gtattttaga tagtatctta taaaagctga
    14161 tatctttagt tctttttgaa actctaagct ctacatttgt gagatttaga ctattccaag
    14221 catttgagct aaatgcgtaa ttaaagctaa ataatagatt ttgaacagat ttttttactg
    14281 gcggaagttg ataaaaatcc cctacaagca aaaccctgcc tctaaatcca gaccaaataa
    14341 gtcttaaact tatcatctcc ataagctcag cgcttaccat ggaaatctca tcgatgatta
    14401 ataaatcaca atttttaagt atttttttta gctcatttaa ctttgatttt tgctttttat
    14461 caagaagttt taactcttca aaattctcgc taattccaaa tttaaaaaaa ctatgacaac
    14521 taacacctcc tactccaaca gcgcttatac cggtgcttcc tagcacaact acatttttaa
    14581 acccgctttt atagtggcta attatctctt tgatagtata actttttcca actccgccac
    14641 cgccggttaa aaatagatta gaatcattta aaatgtttaa aatatcgttt aacaaatcaa
    14701 accctatttt tgttataatt actatattat actaaaaatt tgaggaaatt atatgaaaag
    14761 acttgtttat tctgttttag tactattttt tgtcgggtgc gctcccaaaa tagatcaaat
    14821 tccgcaacca gaacctatac ttagccttaa atttgagcaa aacgcaagta ttttaccaga
    14881 tcttggtaaa agtatcaaag ctaacgaatt tgagctatta agtaagtttt ttagcgtctg
    14941 gaacgatgag atcaaagaga gtaaaaacga gcttatgtgg gcttttaaca tatataaaaa
    15001 cagtccaaat aagaagtatt acggagagag taaactccca agaagcgatg agtggttttt
    15061 ggctcaaaaa aataatgcaa attttgataa gttcaaaagc attttgcagc ctgctattac
    15121 aattgcaaat accgaagtta gggattttcc aactatagaa aaactatttt tagatccatc
    15181 taaagccgga gaaggatatc catttgatta cttgcaagag tctgttttag gtgcttttca
    15241 tccactttta gtatctcatt ttagtaaaga cggtgcgtgg gcattcgtaa aaagcgactc
    15301 tttgtggggt tttgttagat caaaagatat caaattgcta acaaaaagta aagcagatga
    15361 gtttcaaaga tataaatttg cggtatttac aaaagataat gaagcgataa aagatgaaaa
    15421 cggtaatttt ctgttttatt ctaggatagg atcgatattt ccgtacgact ctgaggatta
    15481 cttctctttt aaatttaaaa ataacttcac aataagcaaa gagtatgcaa aacagtttca
    15541 aacaataaat agccaaaatt taaaaacaac attaaatgaa ctgcttggtc aaaattatgg
    15601 atggggtgga gaaaacaagc taagagactg ctcactattt ataaaagatt attttagctc
    15661 atttggtgtt tggctaccta gaaactcaaa agctcaagga caaattggca gagttataaa
    15721 tttaaaaaat ttaacaaata atgagaaaaa agatatgata aaaaaatacg caattccgtt
    15781 tttaacacta ctttatatgc ccgggcatat tatgatatat gcaggagata taaacggaac
    15841 tttaacatcg gtacatgact catgggggat aaaaactaaa gataacggca gggccatgat
    15901 aggcaaaatc gccataaccg atctagagat aggaaaagga aacgaaagca taagcgatga
    15961 ggctctatta ctttctaaaa taacatctat gaatataatc atacaagatg aaaaatcagc
    16021 atttcaaaat ggttatggag tgaaaataga agacaataaa gtaatttttg atgataattc
    16081 tagtatgatt tttgatgatg gaaaacaaaa aacatatgat gaactcataa agcgtccaag
    16141 cataaaagat atgctggctt atgattatcc gctgcttgag cctcttgatg caaaacttat
    16201 agatgcgggg agattcagaa atgagcaatt tttctcaaaa atatatggaa aaacaaaaaa
    16261 tgaagtgcaa tcaaatttaa ttgatgtcgt atggcttaaa aattcagtca ataaaacatt
    16321 taaatttaac tcaaaaaacg gtgctgcaaa agcactgcag aaagttagcg acgaactgga
    16381 ttttatggta aaaaacaatc caaatttatt aaaatactta gataatccag caggaacttt
    16441 caactataga aaaatatcaa aaaccgatct tttatcggct catagctggg gtatagccat
    16501 agatataaat gtcaatatga gcgactactg gcaatggagt aaagacggga aatatcataa
    16561 taatatacca aaagatatag tagaagtttt tgaaaaaaat ggttttatat ggggaggaag
    16621 atgggaacat tttgatacaa tgcattttga atatcgtccg gagtttagcc aaatatggct
    16681 aaacaaagga taataagggg gtttaatata ttaatctaat ttaaaacggc tcactgttgg
    16741 tatatctaga tcatctgaat tcacatttac atcatatcca gatgctcttc tgtaagcacc
    16801 aaatatattt tgttctcttt tttcttgaac tgcttcaggc acaggagcag cctcaggctg
    16861 ttttgtactg tttttatcat aaaaaccagt agctactaaa gttacttgaa ctcttccttc
    16921 ttccatagta tcatcagtaa gagttccaaa gaatatatca gcgtctgcgt ctgcactatc
    16981 ttctactata agcatggctt cacttatatc actcataggg cagcttgggt ggaatctaaa
    17041 atgcactaaa actcccattg cgcctttgat attcatatca tcaagaagcg gagattggat
    17101 cgcattttta agagcctctt gtgctgcttc ttcaccatca gcctctccaa ctcccataag
    17161 agataatcct ctatgactca tagcagttct aacatcggca aagtcaaggt tgatatcgct
    17221 ttttccagaa ctcaatacta tggaactcat accgctaaca gcgcgagcta atatattgtc
    17281 aacctcttta aagctatctt ttataccagc ttttttgtct attattccca taagtttttg
    17341 atttggtata acaactatgc tatcgcactc tttttttagt tcctctatac cttcaagagc
    17401 taatctcatt ctttttttac cttcaaaagc aaaaggagta gtaataacag ctaccgttaa
    17461 agcgcctacc tctttagcgg cttgagcaat tatgggagct gccccggtac ctgtaccgcc
    17521 gccaaatcca gacgctataa aaactatatc agaatattcc aaagtagttt tgatctcttc
    17581 ataactctca agggcagctt ctttaccgac ttcaggaacc atacctgcac caagacctct
    17641 agtttttttc tctcctaact gtattctagt tgtagccgaa gagtcttcta atgcttgagc
    17701 atcggtattt gcagctatca aatcaacgga tctcattccg tcttgattat ttatgccttc
    17761 tcttacaata tgatttatca tattgccgcc gccgccgcct actccaacaa cttttatttt
    17821 ggcgccatat atgtttttat tctcttctac tgtgaaaccg cccatatcat ctcccttatt
    17881 agaataaatt ttttagataa ttaataaact tagaaaacgg attaatgcta tctgccatat
    17941 ctatcctttt ggctccaaca tcgttcttta tagaatcgtc attttctatc tttaaatcaa
    18001 taccttttag gtcattattt tgagtattta tgctaatttc atcttcaata ccttcatata
    18061 tctcataatc tttatcaaat ttatctttag tgtcactgtg taatacttga tcacgctttt
    18121 catccatttc ttttacagat attaaacctc tattttttat cataggttca tctttgtatc
    18181 ttagttttct ttcagagtct atctcataag gagtaaaata accagcacca tacaaacaaa
    18241 gccctatcgc acacgaattt gcaggatctt taaatacgtc tatagagctt tcaaactctc
    18301 ttggtctagc tattcttact ggcatgctat caaatacggc tgaggctaac tctcttaagc
    18361 cgtctaattt tgtcatcccg ccagttagca caactcctgc tcctgctaga tctttataat
    18421 tactctcgct aagcatctta gcaagtatca tcaaagtttc ttctactcgc atataaataa
    18481 cttttgtaat tacgctaata tcaacttcgt ggcttgagtt ttcatctccc aaatcaggca
    18541 acacgataag ctcgttgcct tgatttttaa gtgttccgta tttaactttt atatcttctg
    18601 caactgtagg aggagtatgt aaaatagtag ataagtcaat tgtgatattt gatgagccta
    18661 cacctaaaaa ctcattatac ctaatagagt taccagaatg aataaccata ttacaactag
    18721 ctccgcccat atctataagt acggctccca aagctttttc atcttcattc aaagtagcta
    18781 tagctgaagc atagccggat aatactatat tatcagcttt taaaccagct ttttttatag
    18841 cttttcttaa attcataact gctgattttt gtactacgat aatgtgagct tgaacttcaa
    18901 gtctagtgcc gttcatacca agcggatctt ctatattgtc ttgttcgtct attttaaaat
    18961 tatacggtaa agtgtgtatg atctcataat cgtgcgggat ctttacctta tattcggctg
    19021 agcttatagc acgttcaatc tgttttatat ttacttcgcg ttctggtatg tttataacgt
    19081 ctttgcagtc tatgttttta gcatctttac cagatatgga tactataact ttatcaaatt
    19141 ttgttcctgc tattctcatt acatcattta cgactgcttt aatagagttt gatgctaatt
    19201 caatatttgt gatagaacct ttttttaatc cttgtgattt tacagacccc atgcctatca
    19261 ctttaatcgc attatctgat ctagtgctgc tattctcaca ttcagccata atagcacaaa
    19321 tttgtgtgga gccgatgtct ataccaagta tcttagttcc cacgattatt accttttata
    19381 gtattgttca attttgtaac gtttttgcaa agcatctaat agatctcgct ctaattgtcc
    19441 attttttata gcactagcat tttgagagag tagagcatta tactctttta ctttatctaa
    19501 atttaaaagt ctctgctcta aaatactata cacaacagcc tttgtatcta acataacata
    19561 tccgttttta tttggacttt caaatagctt catgataaac gttaaatact cagtttcgct
    19621 aagtccgtcg atactttttt tagtatctct acttacaaat cctatatctt ttccactaaa
    19681 attgttcaaa gattgttttg ctttttcttc gagaagtttt ttaccttttt catccatata
    19741 aaccttggta agagcatcct ttgcctcttc atagctcatc acttctggca tatttttgcc
    19801 aactaattct gctatcatat atccgttttt gtactcaaac ggctttaaaa catcgcctac
    19861 tttagcatct cttagctcat ttataggaaa atcctcatta tcttctaata ctgttactgc
    19921 agtagtagcg tttgattctc ctttttttat ctttaaatac tcttcaaggg ctgtttttct
    19981 agcttgtttt agctcataat cgtattttac gtcatctttt gctttgtcaa aagttaaaag
    20041 tttatcaaaa ccgtctctat aattgcctct gttttcttca aaaaattcct ctaaaacggt
    20101 atcattcaca tctatattag tttgcggtat aaattttgtt tgtagctcaa atttgctctt
    20161 agttagatat ctatttttac ttttttccca tagatctttt aactcgtttt catctactga
    20221 aatactgttt ttatcggctt tgataatgtt tatagaaacc ttatcttcca taaaataact
    20281 agaagccaaa atatccaaat ccgtctgatt tgtttttaaa tttatagcat caaaaaattt
    20341 gtttaataaa agtttattcg taagttcatt ttcaaaatct tttggagtga ttctagctct
    20401 ttttaatgta tcttcatatc tgcttttatc gaatttacca tctacttgaa aaccttcatc
    20461 cgacgtcaaa gccgctataa gttcctcttt ggaaaccata agtcctatat cgtcaacata
    20521 atttaaaaat aaattttctt ggattaatct ttgtaaagcg attctatcaa gccccatttc
    20581 atcagcttgt tcttgagtaa atttaccctc agataaactc gaataataat tatataaatt
    20641 gctataagtt ttttgaaatt cttggattgt aatatttcta tttcctactt tcgctaccga
    20701 agttgctcta ttactattaa gatcataagc accccaacca acaaaacctg ctccgacaaa
    20761 tgcaatagtg cttatccaaa tagtcacaac caaatacttt ttatgcttct gcatccaagt
    20821 taacataatt ttcctttatc ataaatcgca ataaacatcg caattctacc aaaactctgt
    20881 ttaaattacc ttaaaatcat atgctaaaat taaattttgt aaaattttac taactttttt
    20941 actaattcac aaacctaaat ttaaattttg aaatctgctt gcataattta tcattttaca
    21001 actattttct aaaagagcta ccgtctttgc cagatcatac gcagttcttt catatacata
    21061 aacaccatat ccttttataa ccatgatatt gctgtttttt tctatcatat acctacatat
    21121 ctcagatgga gctctctcat accaatcatc aaattgcttt atatcataaa taaatatatt
    21181 atcaaatttc atatatccaa agtaatctcg cggttcaata gttatatgat ccatgctgta
    21241 agctgtcaaa taaggcggca tcgcgtaaca aatatatttt gcctcgccga tatttttata
    21301 tatatttaga tgtatatcgc tatctatgct agcatcgttc catctataat cttttttgga
    21361 ataaagcaaa gtcagatcat cgttgctaag tccatcaaat atcgcatctt ttttattgat
    21421 aacaaactga ttatgctcta ttctagccga tatagatcca tggaatatac cgaaaaaatt
    21481 ctttttaaac atagatgcgg atatcttttt tatctcaccc atagagtatt caatattcat
    21541 aacttttcct aaattatttg tgataattat agcaaatatc cggcttttat tacaacttca
    21601 ataaatttat gctaacatac taaaataatc ttatattaag gaaacgtgtt ggattcgcct
    21661 catataccgg ttttgttaaa gcctgttttg aactctttta aagatataaa aaacggtact
    21721 atattagatt gtacattagg gtacggtgga cacagcgaag ctattttgat atcaaatcca
    21781 aatttaaaaa tcatagcttg cgatagagat agcgaatctt tatcattttg caaagctaaa
    21841 tttgaaaaat actcagatag aataaaaatt tataaaagta attttgcagg aattttaaat
    21901 aaaatagacc acgaagatat aagaggtatc ttagccgata taggagttag ctcacttcag
    21961 ttagatcttg acgaaagagg atttagcata aatagcaaca atttagatat gagaatggat
    22021 aaaaatcaga cttttagcgc aaaagagttg ataaactcat attcaaaaga tcaattagcg
    22081 gatatttttt ataaatacgc agagcttcca aatgcaaaaa gtttagctca aaaaatagta
    22141 gacgcaagag acaaatctcc tataaaatca gcaaaagagt tatctagtat tataggtcgt
    22201 tcaaatttaa aaaacagaag cgtaagcata gctattttgg cttttcaagc gatacgaata
    22261 gaagtaaata aagaacttga cgagctaaat aatcttttaa atttaataaa aagttcaaaa
    22321 ataaacaatg caattttaga tataatctca tttcactctt tagaagataa aatagcaaaa
    22381 tcaacattta aagagtggga aaaaagctgc atatgtgata attttgttat gaaatgcgag
    22441 tgcggaaata accattcaat aggaaaaata ttaacaaaaa aaccgataac tccgagcgag
    22501 gatgaaataa aacaaaatcc aagaagcagc tgtgctaaaa tgagaatttt tcatatacag
    22561 aggaatgtat gagcgataaa gacgaactgt tacaaaggca tgatgaagag cttaaaaaag
    22621 agcataatct aaactttcaa tctctcatgg ctgcatattt tatgctgctc ctaatactct
    22681 gcgttacgat accgaaaatt tacatcagta atgagatcta ctacactagc cgtgatatag
    22741 cggaattaaa aaataaacta aacgttcttt tagaagaaaa taaagtttta aaagctaaac
    22801 tagaaaaaat aagatataaa aaccagatca tcgataatat gagctattga tgaacatagc
    22861 tatttctaaa tttataaaaa catacgatcc ggcaaatttt gcctttagtt ttgcccttaa
    22921 agcgtctatt tctatgatag tatgcggatg tatggcttac tattttttcg gtgtttacgg
    22981 agctattttt gctgcaaatg cgtctatgaa tctatttttt atcaactctc ttgatggaag
    23041 cgattttact aagattaaat attttttctt atatgtggtt ttagcttcta tgtttttacc
    23101 gtttgcaaaa ttagcttatg aagcgagctg gctgctgttt ttacctacat ttatttggat
    23161 gctttttgta ggattaagta gtttatttaa tcaaaattta aacaaaatac tatctatagt
    23221 caatatctca ggactagtag cattaatagc tcaaagcagc ggtgatttag aagttaaaaa
    23281 cagtattttc gggataatta tcggcggaat tatagcttca atttttcgta taatgcacat
    23341 aggaacatac ggaaaattta ctaaaaaaac ttacaatctt ttactagaag atcttatgga
    23401 catgagcaaa aacctattca atacaaagaa ttttgaatac tctagcgccg agtgtgagaa
    23461 acatatagaa gcgataaaaa agatatttgc aaatcaaagt tcaaatttaa aagacgagag
    23521 gattatcata caccacgcaa gggcgatatt ttatctatat aagtcagaag atatttttca
    23581 ctctttgatc gctataaaga gatactttgg aaccataaaa gatgaaaatt tactaaaaga
    23641 gatacaagat gaaatcacac ataatttaaa agagttgaaa aatatattta acgacaaaaa
    23701 cgcatatatc aaaacagatg ctatagataa gctaaacgat acgcaatacc ttatattcag
    23761 agcttctttg aatgttttat actccaaatt ttggcttata aaaaatggag gagaagataa
    23821 aataaaatta gaaaatgcta aagaaaaaag cataaaaatg ataatttctg atataaactt
    23881 aaaaaacccg gccgtacaaa actcgatcaa actagcactt ggcgtatcta tagctatatt
    23941 aatagctcaa ttaacgcaga taaatcacgg agtatggata gctatcggag tacttagcgt
    24001 aagcagagca agttcatata tgacgaaagt tgttggattt aataatataa aaggagcatt
    24061 aatcggcgtt tgtttggggc ttgttcttat atactttttc aaaacaaact atatttttat
    24121 acctattatt atcatttcga tctttcttac gttttatctg aaaaatttcc cgaccatata
    24181 ctttacatct atgtttatgc tggcttttac gctaattttt tctgtgataa aaactgattt
    24241 tatagatttg ataatattta gagtaacgga tattttgata ggattttttg tagcttttgg
    24301 tgtaactgtt ctatttttca gaagatctac cgagctaaaa ttaagttcaa atttcgatac
    24361 acttataaaa aaactagata tattggcaaa atctatctat aatcaaaaag gcaaatttgt
    24421 agtaaaagaa aactcggttc taattgcatt aagcggttat aaaacagcgg ttttagaaaa
    24481 tgacagaagt aaaaatttta aaatatactt agaaatttat aaaaatcttt atgagataaa
    24541 tagcttactt ataaatttaa aagattacat aaaatcgata caaaataaag ataaatttga
    24601 tatcatagaa gctcatttta actcagatat gaatatcata ataacaagat ttgagatgat
    24661 aggcaaaaaa ttgaacaaac ttccttatta tttctatgac gatgtagagg ataaacttat
    24721 atgtaatgac gaaaaaataa gctatctctt aaaaattata gctgaaaagc aagcaaaaat
    24781 tatggcaaat acggagttat ttatcagatg acactctaag aacaagctga tctaaaacat
    24841 atttttcaag atcttttctt ggtatctctt ttttgatggc ttcattataa attatctcta
    24901 ttttttgaga gtatttctca taaggaaaat atggaaaatg tatatcccaa gcttttttta
    24961 taagttcatg acttatactt tttctagccc aaactttaaa aaaatcaaat cctataaaaa
    25021 caagagccgt cataatcatc gtgcctataa tagagtaatg aaagtctatt ttttcaaaaa
    25081 ttttatgcaa aatgataatc gccgcagcta atataataaa gcataaaatt ccataaataa
    25141 tataaagtct accgtctcta aatctaaaat ttaacttaga tggatcaact agcattcctt
    25201 cattaaatag gcaattagcc tcaagaagat ctttaaataa tacaggttgc tttgatacga
    25261 taaacagttt tttaaatata aattttctta gtttttctaa catctttttt tacttttttt
    25321 attttttgaa taatatatta tatcaaaaat aagtgaaata tggataaaat actcgaaatt
    25381 ttaataggag tagatattat ggcggcaggt gacgcagaaa acatcgtata tttaaatggg
    25441 gaatttttaa ataaaaacga tgctaagatc agcatatttg atcgtggttt tatatttgga
    25501 gacggaattt atgaagtagt tcctataata aactcaaagc tagtcgataa agaagatttt
    25561 tgggatagat ttcaaagaag ccttaaagca atcgagcttg agctgcctat agataaagat
    25621 gaatttgaaa agatacttta cgcattgata gaaaaaaaca gcgtgaaaga aggcggtatc
    25681 tatatggaag ttacaagagg cgtgagcgaa cgtgagttta aatttataaa aggactaaaa
    25741 cctactgtga tggcgttcgt ttatcaaaaa gagatattta acaatgaata tgccaaaaca
    25801 ggaatagaaa taataagcac tcctgatatc agatggaaaa gacgagatat aaaatcaata
    25861 tctctcctag ctcaatgtta tgcaaagaat gaagcgtata aagtaggtgc ttatgagtct
    25921 tttatggtag aagatggatt tgtaacagaa gcaagtagta gcagcgcatt tataataaaa
    25981 gacgataccc ttatcactaa acctctttcc aatgagatct tgcccggaat aagacgaaaa
    26041 gttttgctag cactagcaaa caaagccgga cttagagtag aacaaagaaa atttactatg
    26101 gatgaagttt ataatgccga tgaagtattt atcagcgctg ccactttgat acttctacct
    26161 gttataaaag ccgacggaaa accaataaac aacgcaaaga taggaaaata ctcaccaaaa
    26221 ctgcgtgaat tatatataga gcgtttgaaa aaagaagccg gactaatgta gtccaaaagt
    26281 atccccaaac aaatatttgg agatacttca acttgcacaa atttaaaatc aagttttaaa
    26341 cttgttaaga ttattctcaa gatccaaaga cacctctttt agactttgag aagcactgat
    26401 aaatttagaa gctatctttg tattgttatc aagtattgtc acggactctt tggactgttc
    26461 taataaactc tcaattttac tatttatatc agtagttttg tctgctactt catttgctag
    26521 tctcatagac tcagatgtcg tactttgagt agttctagcc atatccataa ggctatttgc
    26581 ttcatcactt aaagatgcta tatgaactgc attttcattt aaagatgagc ctagatctcg
    26641 aacagctttt atcatatttt gtgcattcga atcaatatct tttaaagagt cgtttgttct
    26701 ttcggccaaa actcttacct cttctgcaac aactgcaaat cctcttccca tatctcctgc
    26761 gcgcgctgcc tctatagctg catttaaagc taaaagattt gtttgatcgg ccacttcgcc
    26821 tatcatatca aggatttttc tcatatcttc agtctgctta acgactaaat ttgttctttc
    26881 agctatctct tgctctttgg tatttgtatc atttaggctg tttacaacgt catttagcga
    26941 atttatcata tcatctagct catcgtatga ctttttattt gccgatgcgg ctttattcgc
    27001 tatctctctt gagatatcaa gctcgtcaga tacgctcttg cttacttcaa atgaattctt
    27061 agcttgcagt tttcctgctt ctgtactatt tgataacata gaagcgtttg tatttaaatt
    27121 tatagtttca ttttcaacgc tttttgcact tccttgagcc gcttttacta tgccttgtat
    27181 tttttctata aaaatattta tatttttgca actctgccct atttcatcat cgttttttac
    27241 tattattcta gcactcaaat cgccatctcc gcttgctaaa tcttttgctc tgcttaaaag
    27301 ctctaaaaca ggacatataa ctactttttt aagcacaaga agcacaacca aagtagtaac
    27361 gataagagac actacaaata taagtgaaaa tatcaagctt ttatttctaa gatctgcgtc
    27421 gatctcgtta aaagagtatg aaagatccat cactcctaaa acatcgccct cttttaccgt
    27481 agcgtgacaa gacaaacact cttgttttgc aaccaaagga gtgactagtc ttaatttatg
    27541 atcccctttt tctttgagat caaaagttag attttgagga ttagagaact gcttttttat
    27601 aatatcatct tttggaacta ctttttccaa accaaaccca tctgaaaggt catctgatct
    27661 aaaaatttct atagaggaaa caccttttat agttccggcg tcctttacgg acttttctat
    27721 cataacagga tcgcccgtat tcatagctgc ttgcacagtt tgaaatattg atttgcttag
    27781 catatctaag ttattttttg tagtttgtgt tgcggaatta ttaaattgtc caacaataat
    27841 aaactgcata acaacaaaac ttataaacaa tactgcaatc atactaagtg caattttctt
    27901 gcctatcgta tttgttctca cataactcct ttttgaattt gtgtcgttaa tgatactgat
    27961 taaatactta ataaatcata aaataatact taatttatcg gtattttcaa tcatcctaaa
    28021 attgccttta tttcatcact tgccatatca atattccatg ccggctccca aactagatct
    28081 atcacacact cctttactac tcttaaaaca gcctcttcta cccagctcaa aatcagctca
    28141 tgtaaagggc aagatttggt agacaaactc attgttataa ccgctttgtc tccagacacc
    28201 tcaacatcgt aaataagccc caaagagact atatcaaagc caatttcggg atctattatt
    28261 tttttcaatt cgccatatat tttgtctttc ataatttaac tccgaaatta atgtatctta
    28321 aaaaatttat catattaact agcactaaaa taacactaac aagcataaaa acctgtgcta
    28381 aatactcaaa tttaaaaaat ataaaaaata tagctagcat attaaaaata agtccgaaat
    28441 aagcagtttt tttcataatc atatcttcta aattcggaat ttttagtttt cctacaaatt
    28501 ttgatatata gtgataccag attaaaaatg gcataatttt atatatatga gctacgataa
    28561 aaggatataa aaaaccgaaa aatagagtaa aaacagctaa atttaaattc aaaaaagagt
    28621 atgcaaatat cgaaaaacca agcataaaaa agctaaaaat aagattcaaa ttccaataat
    28681 cataagctct tctaactcta tttttcaata tcaaaatcca ctgcaaaatc gccaatacgg
    28741 ctgcactcaa aataactttt aaagctccat ccagtaaaaa ccaaataaga aaaaatccag
    28801 atatataaag cgtaaagctt gcgtaaaata gcccgaaatt aacattatga gccaaactaa
    28861 acataggtaa aagtacacta gaagccccaa taaccgtaaa aaatataaac ccaaaaacaa
    28921 aatataagtg aaacctaagt atcgttataa aatcaacgtc caaccagcca aacataatta
    28981 gcactagaag cattccaaga caaataccca tcaaaaacat tatagcagat acaaaaaggc
    29041 agagttgaga aaaactactt atctttaaat ttaaaaaact caaaagatag caaatatcaa
    29101 aataaagcaa acttaaaaat aaaataatag agccaagata tataagcaaa gtattttcaa
    29161 aaaacattcc gtttaaaaac aatataagtg ccaaagtata agcaaaaaca ttgatatatg
    29221 caccttttaa agtaaaaaat gctctattta ggataactga actaagctga taaattgaac
    29281 ctttgataat actaataaca aatccaacta aaaatatgtg caaaaaagta gcagtttgca
    29341 aattcaacaa aacatcaaaa tcactaaatt tatataaaaa aaccgaaaat atcgcaaata
    29401 caatagagat cacaaaataa gcgccgacta gtttaaaagg cggcgcaaac gtacttaaaa
    29461 gcttagccat gacattcaca ttttgtatct agcaaggacg attgagcacc gtcttttaag
    29521 ctaaaaatca gtcttacgtt tccatcttct aaactctcac ttgtatagtc gaatttatct
    29581 tctattttcg gtataagacc tgctggaaat ttatgattta tcattacgac ttttatattt
    29641 ttatctttta taaaatttag agcgattacc gcatttacca taggttctgg cgggatgcat
    29701 cttgaagaat caaatcctat aagctcggtt tgattttcag tttttttata aaaatctaaa
    29761 cttgcaccgt ctgcttttat tttctgccaa ttttcaaaat aattcatatt gacccttttt
    29821 aaatttgata gtattatagt attattttta gcgataaaca ttgatggcaa tcaatagaaa
    29881 aagttaaatt taagtcatta taacaatgat atacggtaat ttcagataat attataagta
    29941 gagtttgcaa atatcaataa agataaaaat gcaaaactct aataaaaata atttcaagca
    30001 aaaaatctaa tgcaaaaagt gtctgatacc agtaaagtac atactcatac ctgactcgtc
    30061 agccgcagcg ataacgtctt catcacgtat actaccgcct ggttgaatga cgtttttaac
    30121 gcctacttta ctagctatct ctatgctatc tctaaacggg aaaaacgctt cgcttgcaag
    30181 cgaagagcct cttagatcta tacccatatc atgagctttt gtcaccgctg ctctagcggc
    30241 atccactcta cttgtcatac ccatacctat agctaaaagc atggcgtctt ttacataaac
    30301 tacgcagttt gattttgtaa gtgcagctat cttccaagcg atctttaagt cgtttagctc
    30361 actaacgtcc gcttgttttt tggttactaa ttttgcattt gcaatttcat catcgctcac
    30421 gtaatctttt tcttgaaaca cgaaaccgcc atctatgtgt ttaaaatccc atttatcgcc
    30481 tgattgcaca aggtatttgt tattttgagt aaagattttt gtacgttttt tatcactata
    30541 aatttctaaa acgccgtctt caacgtttgc agcgatgata acttctataa atatctcttt
    30601 agtcttaagc gcaagctctt ttgtgagagt tccatttatc gctactactc cgccaaatgc
    30661 actaacagga tcacatttca aagctttttc atagctatct aaaacatctt tacctatagc
    30721 aaaaccgcaa gggtttgcgt gtttacagat agctaccgca ggagtatctc caaaactact
    30781 agcgatagaa acggctgagt tgatatctgt catgttattg aaacttgctt cgccttttag
    30841 ctgagtaaaa tttaaactca aaaagctgtc aaactcgtaa gcagcacctt tttgatgagg
    30901 attttcgccg tatctacatt caaacacttt tgccgcactt ataaatcttt tttcgccaaa
    30961 accaccttta aatctatcgt tcatataatt tgctatcata gagtcgtaac tagcggtgtg
    31021 ctcgaatgct tttatcatca tacccagtct aaactcgtag ctatcgctgc tagtttttag
    31081 agcttctaaa accgtgtcgt agtcatttac gtccgttacg atgataacat ctttaaagtt
    31141 ttttgccgca cttcttacca tagcaggacc gccgatatcg atattttcga tgatctcgcc
    31201 aaaatcatca gttcggatag tggtctcttt aaacggatat aaatttacgc aaactaaatc
    31261 tatggcgccg ataccaaaat cacctgcttg ttttacatga ctagcgtcat ctcttttatg
    31321 taaaattcca ccgtgaattt ttggatgcaa agtctttacg cgaccctcaa acatctcagg
    31381 acttttggta taatcactga cttcgaccac ttttaaattt gcttctttta atgttttata
    31441 agttccgccg gtactcaaaa tctcaaaacc taagctttca agtccttttg caaaatgctc
    31501 gatcccgctt ttatcgctca cactgataag cgctctcata aatctctcct tttttaaatt
    31561 taatatctat tttccaaact tagcttttaa atccgcgtaa gcttcattta tctcttgaag
    31621 tctctttgta gcgttactaa tgactttttc gtctgccccc attaagaaat caggatgatt
    31681 ttgtttagca agttttctat attgtttttt tatctcatca aaactagcgt ctttattgat
    31741 ctctaaaacc tcatacggat ctttgttagt agtattttgg ttactttgtt tattcctaaa
    31801 ctcgctttca aaacgctcaa acagagtatc ttttataaac ttaccgatac caaatccgtc
    31861 acaaacttca tttaagatct ctttttcagc gctgttgaac tcgccgtcta tgtaagctaa
    31921 atttagtaaa aacataacta tatttacaca agcttgctca ctaagcttaa gcttggtctt
    31981 atactctaaa gctatgctaa atgcagtatt tgaactattt ttttctattt cgtaagtttc
    32041 ttttaattca tatctgatac ttgcattttt aagtttattg catatatcat caaatattaa
    32101 agatatataa taagcctctt ctttagatac aactccatcg ctttttgcaa cttttgctat
    32161 aagtcttacg aaaaacttag catctaaaat atcaaaagat ctattatcaa aatttccgcc
    32221 gaaatttacg gtgggttttt ttatataact cttactaaga atataaaaaa tagcaacaac
    32281 aatcgcaatt ataatgaaaa tatgcatcaa tcttcgcttt tagttatttt agagaactca
    32341 ttaaaatata tattttttag ttcatttaaa tttattttaa tatcatttag tctaaatatt
    32401 tctcctgtgc ttaagccgat tttttcaaat ttgacagagt gtttatctgc taattcttta
    32461 aatttactct catcttttac tccaacaacg gcgcgtgaaa aactttcatc aaaaatccat
    32521 tttgaatcat caaatttaca ttcgccatca aaacctaaat ttgaaacggc gctcattttg
    32581 gccaaagtca tagcaactcc acctactcct acggaattcg caaactctaa aatacctatt
    32641 ttatttgcct ctataacaag gtcccaaaga gctctctctt ttttatagtc gatctccttc
    32701 aactcgcctt tgcaaactcc atataaggca tttacatata aacttccgcc aaactctccg
    32761 ctagtatcgc ctagcaaata tacggctgta cctgagtttt taaaaatact atttaggctc
    32821 ttgtctgcgt tctcatttac tccgacagtt actatagcgg gcgtcggttg aacgcttact
    32881 ccatctgttt cattatataa actaacattt ccgctaacta ccggggtttg caaagcggcg
    32941 cacgcttctt ttataccctc acagccattt gcaaactgcc acataacttc tggattttgc
    33001 ggatttccgt agttcaaaca atcagttata gctagcggag ttgcgccact catagcaact
    33061 tttctgccgc ttgccgcgac tgctgctgct gcaccgattt ttggatttac gtaattatgt
    33121 ctagtgttgc actccatacc catactaatg gctctgccgt tttcttttat tcttataata
    33181 gcagcaccta gatttcccgg ttttttaatc gtatttgtgc cgatatttgc atcatattga
    33241 tcataaatca atgatttatt gcttatattt ggatctttta atagcttcaa aaatgcatct
    33301 tgatttttaa atttaggata attttctaaa tttaaatcct ttatctcgcc tagataagca
    33361 ggtcttttga cggctctatc aagcacaggc gcagcctcgc taagcggatc tataggaata
    33421 cttcctacta actcatcatg ccagaataac tccataatac cagtatctgt tacctcacct
    33481 atgatttcag ccgagagatc ccattttgca aatatctctt ttatcttatc ttcgcaacct
    33541 tttttagcgc aaataagcat tctttcttga gattcactaa gcataagatc atatggagtc
    33601 ataccatctt ctctcatagg aactttatcg agatacattt tcataccact gctactgtgt
    33661 cctgccatct caaaactgct agaagtaagc cctgctgcac ccatatcttg aatacctact
    33721 atataatctt gtttaaataa ctccaaacaa gcttccatga gcagcttctc agcaaacgga
    33781 tcgcctactt gaacagttgg acgtaagctt ttattttctt cattaaaact atcgcttgcc
    33841 ataactgcgc cgcctagacc atcacgacct gtttttgaac ctacataaat tactggattt
    33901 ccaacgcctt ctgctttagc gtaaaatatc tcattttttt tacaaattcc aagggcaaaa
    33961 gcattaacca aaatatttcc attaaaacta ggatcaaacg tggtttcgcc tcctacagta
    34021 ggaactccca tacaatttcc atagtgaccg ataccgccta caacgccttt tacaagatat
    34081 ctttggtgtc tatttaaagg atcctctcct cttatctcac caaatctaag agagtttaaa
    34141 ctagcctcga ctctagctcc catagtaaat atatctctga aaataccgcc gactccagtc
    34201 gctgctcctt gaaaaggctc tataaagctt ggatgattgt ggctttccat cttaaatacg
    34261 gcagccacgc catctccgca gtcaataact ccggcatttt cacccggtcc ttgtataacc
    34321 caaggagctt tagtcggaaa accgtttagg tattttttac ttgatttata gctacaatgc
    34381 tcgctccaca tagctgaaaa tatcccaagt tcaagcaaat ttggctcacg gccaagaatt
    34441 tctaatatct ttgcatactc gctatcactt attttatgag ctttaactat ttttttgtcc
    34501 atttttcacc tctaaaaaga ttattttcct aagcaaaaac tgctaaacat cttgtctaat
    34561 aattcactat tttccatagg ttttgttata cttcctatat gttttaaagc gatatttaat
    34621 tcataagcaa ataactctaa ctcactttca tttaacaatt caagtgcatt tttaatcgcc
    34681 tcgctagcta accttgaagc ttctatttgt cgatttgagc ttagcattat atcgtttgta
    34741 tcttgtgagt ttaagtaaga ctcaagctct ttactaagcg gagtagagtc tagcttagca
    34801 gatactaaaa cagcatttaa gcttatatca aatttaaatt ccaaatcgga tttgtttaat
    34861 acataaatag tttttttatt taaatttgat ataaattcca aaatttgcct atcttctaaa
    34921 ctagcttttt gtgagctatc aaatacacaa aatataatat cggcttctct tgcggctctt
    34981 tttgaatact ctattccggc ggcttctata ctactatcaa actcatctct aatacccgca
    35041 gtatcgatga tacgaaccaa atgagatcca aattttatct gctcttctat agtatctcta
    35101 gtagtaccgg cagtctcgct agtgatagct ctttcatagt gtaaaagtga atttaaaata
    35161 gaactcttac cgacatttgg cctaccgatt atagctactt tatatccatc gataagacct
    35221 ttttttgaat ttgaaatatt tataatatgc tctagttttt tgtaggaatt taaaagtaga
    35281 tcttttgaac tatgtagaat gtcgctaggc agatcatcat cagcgtaatc tatgcaggtt
    35341 tcggtataag caagtatttt tataagctca tctcttaatg aatttacaaa aacgctaagc
    35401 tctccattca ttgttctagc taaaatctta gccgcgccct cgcttctagc atttatgagg
    35461 ctttgtatgc tttcggcttt aactagatcc attttgccgt ttaaaaaagc tcttttacta
    35521 aactctccgg gatttgccac tctagctccg agccttaaaa gttcatctat aattaaattt
    35581 gctacaacaa cgccgccgtg agtttgaaac tccacaacat cctcacctgt aaaactaaat
    35641 ggagctttat aataaataac tatggcttca tccaaaaaaa ccatattttc acaatacaat
    35701 tttcttagat gagcatagcg cggagtaaga ggttttttac ataaatttat cgccagatca
    35761 taagcgccat ctccgcttaa tcttactatc gaaatacttc caacgccata agcgctagca
    35821 agtgcgacta tattcatttt ttgtaaaagt catttacgac tacatagcga ccttcatcgc
    35881 cgctttttat accgacatat ttattaggaa atctctgtct tagctgctca agtgctatct
    35941 taactaaaac tccatcaaga ggttttgttt gagcccttcc tgtagtctct actctatcga
    36001 taactcctga taaatatgca gctatcccac tctcttgatt ttttaaaaac tcggctattt
    36061 ctaagcgaat tccaagattg tattttgagt ttatccagtt gaaaagaagg tatgatatag
    36121 ctttataacg atatccctct ttgccgatta aaagtgcagc gtcagctcca tctagcttaa
    36181 taaaaagtgt ttcattatca aattcactta catctgaaat ttctatctcg aagcagcttg
    36241 ctttaaataa tttttctaat ccggatctta tctcgtctat gcagtcgttt ggctttagtt
    36301 ttaacctagt aggcgaattt ttagcatcat cgctcttatg aaaagtatca aaaatagagt
    36361 gatctatctc tagtcgtttg gtttttggtt catgcaagat ctctttaacc tctttatgaa
    36421 tttcaagagg ctctttttta tcttctaaat ttgatatatt tacaggtttt gtaggttttt
    36481 ctactttttg tttatcattt ttttcaaatt tatcgttttg gtattttgta gaacgttttt
    36541 ttctatcttt tttatactca aaagagtcat tcttagactc tttaaaacta tttttagaat
    36601 catggtgttt tcttagagag gagcaattag cttctataat ggcatctttt ttaaataacc
    36661 caaaaagccc tctacttgga ttttggatta tttttatatc tgttagatca gtaactgaac
    36721 aatggagctc ttctgcagct tttagatagg cggattgcag atcttttgcc tctattttaa
    36781 cgctcatgat ttttctccat aatagcttgc tctttctgtt ttttaaatat tttatttacc
    36841 acaagttgct gagcaaccga acaaagatta tttataaacc agtaaagcgt aagacctgca
    36901 gggaaagtta caaagaaaaa tgtaaatatc aaaggtaaaa acttcatgat tttttcttgc
    36961 atagggtctg taaagtttgc gggagtaatt ttttgctgaa taaacatagt agcacccatc
    37021 aaaacaggaa gtataaaata cggatccata atcgcaagat cttttatcca aaatatccaa
    37081 ggagcgcctt ttaattcaat agcgtttaat aatactctat aaatcgcaaa aaatatcgga
    37141 atttgaataa gtatcggcaa acatcccccc ataggatttg cgccgttttt cttgtaaagc
    37201 tccattacat gagcatttag cttactagga tcgcctttgt attttgcttg aatctctttc
    37261 atttttggtg ctagatcttt taatttattc atagacacca tacctttata ggttagagga
    37321 aacaacacaa ttcttatcac gatagtaaga gcgactatgg caaaacccca attccctata
    37381 taattatgca gccaactaag tagtaaaaac attggttttg ctataaatgt aaaccatcca
    37441 tattctataa catcaaccaa atttggatca atagatttta aaattttatg atcttttgga
    37501 cctatataac ctttagtgct aaaactaccc gaactcttta cgaatgatag cgtattttca
    37561 gcactatcgt tttgtatata aacatctagt gttttatcta cttcataaaa taatgtcgta
    37621 tagtatctat cgctattagc taagatatct acgcccgtaa atctctcgtc gccttttgct
    37681 tttttatctt ctattatctc aagactgccg tcgctttttc tcattaatgt tccatgaacg
    37741 gtatatccat ctacaacaac atttggtcta aatccagggg tgataaaata atcttcgttt
    37801 ttactaagtt ttactttaag atcataagct ccgtctggat aaaaagtaat cgttttagtc
    37861 aaagtaacgc cgtttaaagc ttgagtcaaa accacattgg ccggagactt ggtaacatct
    37921 atagtttctg cactgctagt ataagctact ttaaaagctt cttcatttaa atctttattt
    37981 gaaaatctaa tttctagtgg aagcggagag tgatttaaac tcacaagaga gatctgtttg
    38041 tcgttttcat ctttaaattt ggactcattt agtacaaaac tactaattcg tcctagttca
    38101 tctatagttg cattatatgt ttttcccgaa atttgaacta tatttttact agcattagaa
    38161 gtaacaggag ctgcgctatc tgaagcattt atgctatctt gtgaagctgg agcgctattt
    38221 gccgatgaac tattttgttc tgcataagaa gcagtttgat ttatatcgac agttctttta
    38281 ggaataaaaa aataatcata agttataaaa aatagtatgg aaataaccgt agctataaga
    38341 agtctttttt gggttgaaag tttatctaac actatgtttc ctttaatgaa tcaaatactt
    38401 ttatcaaata aaacccacct tttctatgag gaacaaacca aaaattcatt ttacacggtt
    38461 tgttttttga aaagatagta taaggcgtaa attttctttt tactaatgga taatctatgc
    38521 caccacgaaa tagttgatta caccttaaaa tccttaaaaa aatagcaact atagagtaaa
    38581 aaaatccatt atatcttagt tgccataagg catattctga acaagttgga tagtagcggc
    38641 aggattttgg caggattggc gaaatgtact ttttataaaa aacaataaaa ttccaaaaaa
    38701 ttactttcat tttatggaat ccaccttttt caaagcccat ttaagatttt tttctacttt
    38761 atcaaatggc attttttcta gtcccgcctt tgctattaaa atataaatac catctttaag
    38821 ctcgctacta aagttaaaaa aagcagacct taaaactctt tttattctat ttcttacgac
    38881 tgcctttcca acctttttac tggcgactgc tgcaaattta gtagtatcag actctaaaaa
    38941 atagataact gcgcattcaa agtgccactt tttagcacct tgataaacac gtataaactc
    39001 tttgctatcg ctaatagagc tgaacctatc tataatcaag tttgcctatc tataaataac
    39061 tatgcagcta gtctttttct gcctttggca cgcctagcat ttatcacttt tctaccattt
    39121 ttggtcttca ttcttccacg aaaaccatga gttctctttt taggagtttt atgtggttga
    39181 taagttcttt tcataacttt ccttttgtca taaattaagt cttggatttt atcaaataat
    39241 tacttaaaaa accttttaag ttttgtttgc ttttaaattt agatctcttt taatcacttt
    39301 aaaagttaat tttaaattat ctactaattt tttattattt aagtt
//
LOCUS       DAPPKW010000007        33882 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.007, whole genome shotgun sequence.
ACCESSION   DAPPKW010000007 DAPPKW010000000
VERSION     DAPPKW010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 33882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33882
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.007"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..322
                     /locus_tag="RPW04_000329"
     CDS             <1..322
                     /locus_tag="RPW04_000329"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDX6294449.1"
                     /translation="HNFLLLLAERKRLGLIPEISKEFEYQQAVRDCKFSGLISGNFEL
                     SAAQKTELEERFSKKFGAKIEFENIKNNYNGIKIELDDLGVEVSFSIDRLKAQMSEYI
                     LKAI"
     gene            337..1854
                     /gene="atpA"
                     /locus_tag="RPW04_000330"
     CDS             337..1854
                     /gene="atpA"
                     /locus_tag="RPW04_000330"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDX6294450.1"
                     /translation="MSVKLKADEISSIIKERIENYNLSVDIEETGKVISVADGVANVY
                     GLKNVMAGEMVEFETGEKGMALNLEESSVGIVVLGKSSSIKEGSSVKRLGKLLRVPAG
                     DALIGRVVNALGEPIDAKGAIEATETRFIEEKAKGIMARKSVHEPLQTGIKAIDGLVP
                     IGRGQRELIIGDRQTGKTTVAIDTIINQKGQDVICIYVAIGQKQSTVAQVVKKLEEYG
                     AMDYTIVVNASASDAPALQYLAPYAGVTMGEYFRDNSRHALIIYDDLSKHAVAYREMS
                     LILRRPPGREAYPGDVFYLHSRLLERASKLSDKLGAGSLTALPIIETQAGDVSAYIPT
                     NVISITDGQIFLESDLFNSGIRPAINVGLSVSRVGGSAQIKAIKKVSGTLRLDLAQYR
                     ELQAFAQFASDLDESSRKQLERGQRMVEVLKQPPYSPLPVENQVIIIYAGSQGYLDDI
                     PVSAVTKFEAELYPYIEAKYPEIFEQIRNKKALDKDIEEALSKALNEFKATFSAE"
     gene            1864..2751
                     /locus_tag="RPW04_000331"
     CDS             1864..2751
                     /locus_tag="RPW04_000331"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDX6294451.1"
                     /translation="MSNLKDIKRKIKSVQNTQKTTKAMKLVSTAKLKKAEEAARHSRV
                     YALKINEVLSEIAYKINQFKIVGKDDKFFDLKASINKVDIIFVTADKGLCGGFNISTI
                     KTIRNMIEEYKSKKIKVRLRAVGKKGIEFFNFQGVEILESYKGISSAPTYDKAKGVIA
                     SAISDFVAGATDKVILVHNGYKNMISQEIRINTIVPVETPSIENVEHSSSLMEIEPEN
                     DEKILEELMKKYFEYSMYYALIDSLAAEHSARMQAMDNATNNAKARVKELQLAYNKAR
                     QESITTELIEIISGVESMK"
     gene            2769..4166
                     /gene="atpD"
                     /locus_tag="RPW04_000332"
     CDS             2769..4166
                     /gene="atpD"
                     /locus_tag="RPW04_000332"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002939420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDX6294452.1"
                     /translation="MKGIISQVMGPVVDVDFKDYLPKINEAIEVNFTVEGNTHKLILE
                     TAAHLGDNRVRTIAMDMSEGLTRGLDAIALGSPISVPVGEKVLGRIFNVIGDLIDEGE
                     EEKFDKKWSIHRDPPAFEDQSTKSEIFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTV
                     IIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESGVLDKVALCYGQMNEPPGA
                     RNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRIPSAVGYQPTLA
                     SEMGRLQERITSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTVLNRAIAEKGI
                     YPAVDPLDSTSRMLDPQILGEEHYKIARGVQAVLQKYKDLQDIIAILGMDELSEEDKL
                     TVDRARKIEKYLSQPFFVAEVFTGSPGKYVSLEETIAGFKGILEGKYDQLPENAFYMV
                     GNIDEAIAKAEKMRA"
     gene            4184..4573
                     /locus_tag="RPW04_000333"
     CDS             4184..4573
                     /locus_tag="RPW04_000333"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDX6294453.1"
                     /translation="MNTIHLEIVTPEGLIFSNDAKMVVLPGSEGEFGVLPGHASLVSL
                     LKIGVVDIENVDGTHDAVAIDWGYVKIDENKVIVLVDGAVYVAGNSESEIAQSIENAK
                     TLVKRMSDGNGILATALARIENAARAR"
     gene            4574..5173
                     /locus_tag="RPW04_000334"
     CDS             4574..5173
                     /locus_tag="RPW04_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009294341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDX6294454.1"
                     /translation="MLGFLDLLLNYLSKSSLVTIIVLSWLSLYFVISFTILFSRYIGL
                     NNWIKKEQVALESILMGTKSDLVDSSLKKCASGRITKEKLDVCISLAEANATSGLTML
                     SIIASTSPFIGLFGTVISILETFAGLGQGGGSSSLSVIAPAISEALVATGCGIFVAIP
                     AYSFNLLIKRKAYEIISIIRREANILVSIKEDYSQNDKF"
     gene            5160..5552
                     /locus_tag="RPW04_000335"
     CDS             5160..5552
                     /locus_tag="RPW04_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002947482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HDX6294455.1"
                     /translation="MINFDENPELNITPLVDIMLVLLAILMVTTPAIVYEEQITLPDG
                     SKSKAVSQNLKTLTVRIDAQRKVYINQSVMSLPELGDNLILISQKYDKNSPVYIKADK
                     RLIYDDVMYVLKTMKNAGFTKVALETNG"
     gene            5554..6366
                     /locus_tag="RPW04_000336"
     CDS             5554..6366
                     /locus_tag="RPW04_000336"
                     /inference="COORDINATES: protein motif:HMM:NF024503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB C-terminal domain-containing protein"
                     /protein_id="HDX6294456.1"
                     /translation="MSRKIGAKYPTLNSFVVAIFIYVCIIISLFYKIYTAEDPKKYTN
                     QQDAFMDVFVVQTEVADTITAPKKAEEKIEAKLTEEKEQEEVTKTTNKQNPKPVEEPK
                     LTPVLDPKPAPSVNLNELFSDVKVEQPTPKPKEQAVQSNKKSDKKTSSSSKSATDILN
                     ALQKDITAKAPPAGMTGEYNKFMGDITEIIQRKWVSYKADTNNDAKVQIFIDKFGKFS
                     YNIISLSYNKEFNSKVKEFLERLKETQFPTPPTNTTTSVALTLRDQIDTEIQ"
     gene            6363..7628
                     /gene="tolB"
                     /locus_tag="RPW04_000337"
     CDS             6363..7628
                     /gene="tolB"
                     /locus_tag="RPW04_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014516670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HDX6294457.1"
                     /translation="MRKLFLLIAFCIGLSAADATIEVVNKGLVLPRIVVQDATTNFAN
                     NTLKNRFFKLMIGDLKVGSSFEVIEDYYTSSYDGDFRTNLANDKNPELILRYALGVEG
                     NGLTLKVKLLNAKNGSVRFEGTFSQAELAKFPFLAHKSIATIARNLNLSPIDWMDKSI
                     IISQYTSPGKSNIIVADYTLTYQKVILSGGLNIFPKWANKDQSAFYYTTYINLVPTLY
                     KYDLATGKKTKITQSGGMLVASDVSSDGTKVLLTMAPDDQSDIYIYDTTTKKKSRITD
                     FKGIDVNGNFVDNDTRVVFVSDRLGYPNIFATSINGGAVEQMVFHGKNNNSVSTYQNY
                     VVYSSRESVGDYSAKTFNLYLISTKSDYIRQLTSGGVNTYPRFSSDGGSIVFIKNAGN
                     ESAVGIIRVNENKSFQFPLRIGKLQSIDW"
     gene            7715..8236
                     /locus_tag="RPW04_000338"
     CDS             7715..8236
                     /locus_tag="RPW04_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDX6294458.1"
                     /translation="MKNLVLVSAVAAALFIAGCSSKSPEVDMNADANKMSNNNGMSNT
                     DTMSDAERLNALMNQIQSQVKNVYFDFDKFNIRPDMQGVVGTNASLFNQNGADSLRIM
                     VEGNCDEWGSDEYNYALGVKRAKTAKDALVAQGVSADRIEITSNGESKPVCTERTKAC
                     DAQNRRDEFKILP"
     gene            8240..9121
                     /locus_tag="RPW04_000339"
     CDS             8240..9121
                     /locus_tag="RPW04_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294459.1"
                     /translation="MRRDLFIAAFLWAASSLFAEISVFDAGNLNQDNPYGLTDNEKIL
                     LKNKEKVEKLNQNIGSVQSDINVAQENIEGLRSILDGLNQTNLKLENRATDLENRVNS
                     IDLNLTKEITELKSIVKQNKTIQDENYKKITKAISELSALIDSVVANQAAEKNSSSTI
                     KDNKIEDTKSVTKFDDMNLADVLKDADTSYNNKEYLKASEAYAFLVKKKHKPAYSNFM
                     LGEIEYTNKNYKDAIPYYQKSVELSQKGTYMPKLLYHTAISFDKIGDTKNANKFYNAL
                     RQAYPDSKEAKASPVRK"
     gene            9142..9714
                     /locus_tag="RPW04_000340"
     CDS             9142..9714
                     /locus_tag="RPW04_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDX6294460.1"
                     /translation="MSKVIKMFYELKDAKTGELLESNIDAQEIAFVTGKNQVLEALEN
                     GVINLKVGENATVRIPASEGLGEYDDSALQVLPKEQFAGIELNEGMELFGEGEDGSTV
                     RVTVKSISDNDVTVDFNHPYAGKDLEFNVKITENRDADADEELTGVVVMPHVCGCGGG
                     SHHHDHYGEGCCGGGHHDEHGGGCCGKHHH"
     gene            9723..10640
                     /gene="fabD"
                     /locus_tag="RPW04_000341"
     CDS             9723..10640
                     /gene="fabD"
                     /locus_tag="RPW04_000341"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDX6294461.1"
                     /translation="MMSDVAFLFPGQGSQNFGMGAEIYENFKAAKDLLDSASDFCKID
                     FKELMFKENDRLSISEFTQPAIVLNSFMCFLAFKENIDINAKFTFGHSLGEFSAISVS
                     GGFDMLNAINLVHLRGKFMSEACQGKNAGMMVILGLNDDIVKGICEKSSKSVWAANYN
                     CDGQIVVAGVKSDLIELEPVFKEAGAKRAMLLDMSVASHCPLLDSASIKLYDELKSII
                     KDEFSPVISNVTAKVYTSKTEALELLKLQLVKPVLYKQSIKNYENDVDCFIEFGSSVL
                     KGLNKKITSKPTYSISNLSSLEESLKELA"
     gene            10637..11323
                     /locus_tag="RPW04_000342"
     CDS             10637..11323
                     /locus_tag="RPW04_000342"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HDX6294462.1"
                     /translation="MKIAILGAMPEEIAPLLNKLQNYETLKYGKNEFYLAKYKNHELV
                     IAYSKIGKVNSTLTATLMIEKFGCEILLFTGVAGALNEKLKIGDILYATSTVQHDLDI
                     SAFGHPYGYVPGINVYEKTDEKLNNIAKKVAANNGVNLVSGVIASGDQFICDPIKKEW
                     IKSTFDADAVEMEGASVGQVCATLDIPYFLMRAISDEAGGGAEIDFDKFVVEVANTSA
                     KFVLDMVEYL"
     gene            11320..12072
                     /locus_tag="RPW04_000343"
     CDS             11320..12072
                     /locus_tag="RPW04_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine biosynthesis protein TtcA"
                     /protein_id="HDX6294463.1"
                     /translation="MIDLSKKLIRQVGQTNAKYKMFEKNDKILLGLSGGKDSLALAHI
                     LKHFQNVTPDKFEFEAVTLSYGMGEDYAYLTAHCEKHGIKHSVIDSSIFEISKDKIRK
                     NSSFCSFFSRMRRGYLYTYALEHGFNKLAIAHHLDDAAESFFMNFTYNGALRTLAPKY
                     RAKNGLVLIRPLINVRERQLRDNATKNNLFVIGDEACPAMRFDVKMPHARHETKQLLA
                     GLEKENPKLFTSLQAAFENIHRDTFFDLNEQL"
     gene            complement(12145..12975)
                     /gene="fliY"
                     /locus_tag="RPW04_000344"
     CDS             complement(12145..12975)
                     /gene="fliY"
                     /locus_tag="RPW04_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliY"
                     /protein_id="HDX6294464.1"
                     /translation="MNRFLDIFKNECKATIEGLTGNSPAIGETAEFDAATQNGIQTPI
                     VVANINVSGDINGKIIFIATPLLITAINDLMLGEEEPTKNLNIGDDELDASKEIFSNI
                     LSAISTSLTAAKDMPKLSFEIQKVVYLDENQILDLSSYEKLFLCPVTMGDINEHIGLV
                     IDFAFNKYFNKSDEKHTKEIPHLKADITEEIKNIGLIMDVRLPIRVRIGSKKMLLKDV
                     LSMDIGSVIELNQLANDPLEVLIGDKQVALGEVVIVDGNFGVQITEIGTKKERLEQLK
                     "
     gene            complement(12968..14059)
                     /gene="fliM"
                     /locus_tag="RPW04_000345"
     CDS             complement(12968..14059)
                     /gene="fliM"
                     /locus_tag="RPW04_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009649303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HDX6294465.1"
                     /translation="MADILSQEEIDALLQVVDEDGDAAVVDTTPHPEDQKQVVIYDFK
                     RPNRVSKEQLRAIKGIHDKLARNLASQISSIMRSIVEIRLHSVDQMTYGEFLMSLPSP
                     TSFNVFSIKPLDGNCVLEINPSIAFPMIDRLLGGNGDGFESNRELTDIEINLLDAILR
                     IMMQRLKESWSMITDMYPNVEAKESSPNVVQIVSQNEIVIMVVMEIIIGNSSGMINIC
                     YPVIYLEPILSRLANRDIMLGETSAKKSRNKELKTLIGRAEVLYEAILGRTVISVNEF
                     LNLQEGDILRLDKSADDKAIVCIDKKDVFLAQIGLHRFRKSIKIEELIKTDKDEIKNI
                     LEQYEEERKAKLMAYQEETEETEEEEDDE"
     gene            complement(14059..14763)
                     /locus_tag="RPW04_000346"
     CDS             complement(14059..14763)
                     /locus_tag="RPW04_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HDX6294466.1"
                     /translation="MNELKQKQLDAYQKEIKKSQDELVLSYMPALRAMAFRLKSRLPS
                     SIEVNDLISVGATAMVKLSRTYDKEQNDSFWGYVKQRVYGSMIDYLRGLDFLSRGNRK
                     LVKDIDNAINEYFNKFECEPDDAYLAKILGEDEAKIREARNLSDVSATFPIDEQSQLL
                     SESDTESKIEKDELIQKITDVLNEFGEREQMIIQLYYYEELSLKEISDILGITESRIS
                     QIHKRLITKIRERLGF"
     gene            complement(14735..15085)
                     /locus_tag="RPW04_000347"
     CDS             complement(14735..15085)
                     /locus_tag="RPW04_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294467.1"
                     /translation="MRAENFIAFFTVCGFFIGLMFVVVKTNEPMELILYTLLITFFFY
                     LVIHIVIMNYVDANRIGRRYFNKDRYEEVNDYLIAELALREKKLEGAIQKTNENIILK
                     KSGKKHERVKAKAA"
     gene            complement(15099..15968)
                     /locus_tag="RPW04_000348"
     CDS             complement(15099..15968)
                     /locus_tag="RPW04_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006656958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-loop NTPase"
                     /protein_id="HDX6294468.1"
                     /translation="MKMDQADKLRELMISNKIKKSTHFIAVTSGKGGVGKSTISANLA
                     NILAKNGYKVALFDADIGLANLDVILNVKIQKNLLNVLKGECELSDILVKVKDNLILI
                     PGESGDDIFKFNDQFVLEKFISEASILNGIDFMIIDTGAGIGASTQVFLEACDEIIVV
                     TVPDPAAITDAYATIKVTSKMKKDIFMILNMVKNENEAIRIYENIKKVAKTNIKSELD
                     LELLGYLEADKLVSKSIKQRTLFSDDVPHISPSIQLKKAASRLLYKLERKVLDDKEDR
                     SFGGFFKRLVEQF"
     gene            complement(15946..17253)
                     /gene="flhF"
                     /locus_tag="RPW04_000349"
     CDS             complement(15946..17253)
                     /gene="flhF"
                     /locus_tag="RPW04_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009496074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhF"
                     /protein_id="HDX6294469.1"
                     /translation="MATVLKTFTGESAIEALKKAKEECGESAMLVTTKQIQPKTLNKK
                     PVYEILVSVEEETKSPTKESIKEIKQQISAYTKAYEKPPLAPPSIDESVLLNISKAAK
                     EISKVASLPDISIQNQTENEEYNKKIDDVAKQVNKLNDKISMIADMIWDDKAEARGDI
                     TIPPEFSTIYKLAKQSGMKNEHLKAIMQTTIQNMPASMKNNPSAVKRYFYSLLRNMLP
                     CRSESLESKKQRIMMFVGPTGVGKTTTLSKLAYKFAHSGDIRYKTGIITLDTYRLGAV
                     EQLFQYAKIMSIPILDAIELEDFKSALKSLASCDLILIDTMGSSQYDKDKLIKLNGFL
                     KGCGTKIDVNLVLSAGSKIEDLIEIYNNFSFLDIDTLIITKFDETKIFGNVFSLVYDT
                     NTPVSFFSTGQNVPDDIMEAKSEFLVQCVLDGFNKGDEDGSSR"
     gene            complement(17253..17744)
                     /gene="folK"
                     /locus_tag="RPW04_000350"
     CDS             complement(17253..17744)
                     /gene="folK"
                     /locus_tag="RPW04_000350"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDX6294470.1"
                     /translation="MQTIYLDDAKCIMRSKFFPLFNRLDKEIKFKYTAFIGLGGNIGN
                     TKKRFETFLLNLKKDRRFFIKECSPILKNKAFGYESQDYLNAVIMIKSSLYATQILKI
                     MQYYEFKFKRQRPFKNAPRTLDLDILYFSKKVRKSAKLTVPHIGAKERISVIIPIGLM
                     KGI"
     gene            complement(17748..18770)
                     /locus_tag="RPW04_000351"
     CDS             complement(17748..18770)
                     /locus_tag="RPW04_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HDX6294471.1"
                     /translation="MRNFILKDENAVFYECGYSCDNEIYISICGENFFITDARYSIEA
                     RQNIKNAQVIEIQSSLIKEARLLLRKLGVKNLYFNPNDFTFIQYSALSSNLDINFIAK
                     PNFSQIKRMIKKDFEIDILRNAARTGAYKFDELANFLNKNLNLSEEEINFHTQNILKD
                     SGKLGLSFEPITAINSNAAKAHAMPTKLRLQKGDLLLVDAGVKFKRYCSDRTRTINFE
                     NGFKFDKNQKFKDSKKDEIFNIVKEAQAEAIKAVKPGIAAYEVDRAARDYIAKFGYEK
                     EFFHSTGHGVGLDIHELPIISKNSQTILEEGMVFSVEPGIYIENEFGIRTEDVVVVTK
                     DGCEVL"
     gene            complement(18763..19230)
                     /gene="aroQ"
                     /locus_tag="RPW04_000352"
     CDS             complement(18763..19230)
                     /gene="aroQ"
                     /locus_tag="RPW04_000352"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HDX6294472.1"
                     /translation="MKIMVIQGPNINMLGKRETNIYGSMSMENIHEQMKTVADQAGVE
                     IEFFQSNFEGEIVDKIQECLGEFDGIIINPAAYTHSSIAIRDAISAVKLPVIEVHISN
                     VYQREEFRQKSLIAPVCAGQIIGFGPVGYHLAMMGMLQIFEQIKAVRARQQNA"
     gene            19331..20551
                     /locus_tag="RPW04_000353"
     CDS             19331..20551
                     /locus_tag="RPW04_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HDX6294473.1"
                     /translation="MKIIKAKYILTCNDNFDILEDSAIAFDEHIKQISSFDNLIKIYP
                     DAQIMDFKDDIAMPAFINPHVHLEFSSNVSSLDYGDFIVWLKSVIKTRDNLSEQAKNK
                     IIKNAITTMLKSGISTIGEISSFGNEAEICADSGARFIFFNEILGSNSENLSDNWDKF
                     ITKFNNSLKFKSDKFIPAVSIHSPYSTHPKLAKRVLDLARQNNLLVSTHFLESEHEKR
                     WLENGDGEFKIWLGNFSKDVKPFYTPKSFLNYFDGIRTLFTHCVFADEYFEYFDKNLH
                     CITTCPVSNRLLSNKLNLKKVFDSNISLNIATDGLSSNISLNFFDELRAALFTHSDFD
                     LLELSKILLFSSTNAVAKSLGLELGVIKSGKIADISIIKGISVNSKEQLVLEILLHTK
                     FVKKLYIKGNECLF"
     gene            20539..21402
                     /gene="sppA"
                     /locus_tag="RPW04_000354"
     CDS             20539..21402
                     /gene="sppA"
                     /locus_tag="RPW04_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HDX6294474.1"
                     /translation="MSVLKFIFSKIGAIFKFVNEYFKSFVFLLIVILIIVNSGKSEIA
                     NLTEISLKGAIIDESEILSQIYEAKNDSFIKGVLLNIDSPGGSMAPSVQISDAIKDLA
                     SIKPVIAYASGTMASGSYYSSIWANKIYANRGSFIGSIGVIVQSPNVEELAKKLGVST
                     QTIKAGKYKEAGTFIRGWNEDEKNELQSLVNRSYEMFYTDVAMARNLDIDKKDIWANA
                     RVFLAPDAKSVGLIDDVKSYFEVKSELELLSGVASPSWKQQPIMDKFISNLAKESTNL
                     ALKMLFVNEAR"
     gene            21403..22068
                     /locus_tag="RPW04_000355"
     CDS             21403..22068
                     /locus_tag="RPW04_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004308309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HDX6294475.1"
                     /translation="MTLHSLYTGKIKTITGAGTYFETGMLKEPVCEEIYCDKLGFKGD
                     EIKDTKHHGGLEKAVFANSLQNYVIWSKYLEKDMQKGFMGENLCIDGMHESNVCIGDI
                     HKIGTLVLQVSQPRKPCFKLSGVWDNKSFTKYIFETGLTGWYYRVLETGSCKAGDEVI
                     IVQTDKAKMSVFELNMLFYSPKDNLNLVSKFEKVTTITSGWDIAIKQRLKGIYDSSYM
                     SGI"
     gene            complement(22096..24369)
                     /gene="bamA"
                     /locus_tag="RPW04_000356"
     CDS             complement(22096..24369)
                     /gene="bamA"
                     /locus_tag="RPW04_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009294325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HDX6294476.1"
                     /translation="MKKILFLSLAVAGALNAVTIKSVTYKGLMHLSNEVANDISGLKI
                     GDELTEKNSNKAILNLYKQGYFKDIYIEETDGNVVVTLKEKPIIARLDIQGVVTNDKK
                     AIDSILSVKKGQMYDELSINNAKDRIRQFYETKGYFDTVVDVEKIPLNGNDSSLHIIM
                     TVNRGENIIIQNVNLVGSKVLDYSDVEPAVSNKQREFMGWMWGRNDGKVKIYDLPTDS
                     GKIKEEYLKKGYLDASISDAYLNTYFDNYTADLTYYIEEGKPYNVNDITIDAPSELEL
                     DNENIIKKFKLSKGDRLNSAWLRKDISDLENIVADKGYAYVKVYPQTQKNEIDHTVDI
                     TYQVVPNDKVYIRNVIISGNDRTVDRVVRRELYLTEGNLYNKTDLIDSKNALKRSSYF
                     EDVEIKENRVNKEQVDLEVVVKETSTGSVTGGIGYGTSDGLLLNAGISDTNVFGSGYK
                     GSVSVDKSDDTLSGNIGLTNPRVMDSAYSLGGNIYANDYDWNEYNEKNYGFSLTGGRK
                     IGRYTNAFLTYQIEHSKITGLDEFYRDAGYLNGTNIKSSIIPGITFNNTDDYYIPRSG
                     IIASTSFEYAGAGGDIEFVKNKTSFNYYLGLSDYIDYDLILRYKAAFGYLWNSDEAKL
                     PINEKLFLGGIRSVRGYKNRSVTPKKHICNPKRSDGSVINACKDIETGGKISFSNSVE
                     VSFPIIDRLKMRGLVFFDYGMIGDDSLNEIKRYSTGVGIEWLTPIGPLQIFYTRPLND
                     KPGDDTSSFEFSIGRRF"
     gene            24542..25372
                     /locus_tag="RPW04_000357"
     CDS             24542..25372
                     /locus_tag="RPW04_000357"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HDX6294477.1"
                     /translation="MNVGIIGLGLIGGSLGLALRDMKLITKVSGYDLNKENESDALKL
                     GLVDEIIGFEEMKKRCDMIFLAIPVEAIIKILQNLKDIPKSTTIIDLGSTKVEILKSC
                     PDEIKENFVAAHPMAGTENSGPKAAFKTLLNGAVVVVCDDKNAGENHVKRAVEILSHA
                     GMKIVFMDSKSHDHHVGIISHLPHIISYSLVSSTLKEEDKRNILLLAGGSFSGMARIA
                     KSSPQMWSDIFKQNKSNVLNAINSFKKELEICENMIENDQWDELKAWMQTARGLRDIL
                     "
     gene            25433..26803
                     /locus_tag="RPW04_000358"
     CDS             25433..26803
                     /locus_tag="RPW04_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDX6294478.1"
                     /translation="MRKNSGFKIIIIGIIIILSIFIVVSISNLNILEKEPPNIALENE
                     THWNLKAPIPLKITDNAGIKFIKIVLNDGSASQVLLSKEFNDSQTEVNLNIAFPKNAI
                     FDEKKTYTLIVEAIDTSKWNFFGGNKSVKNSKLLVDTKRPEIYILNQSYKISKGGAAA
                     VVFRASDDNIKDVYIQTNYGKKFKVTPFYKDGYYSSLVAWPSSENEFSADVVAEDMAG
                     NKSNMRIRYFLQDRKYKISKIALNDRFLDGKILDLANQYATDPNAMDKLARFKFVNET
                     LRISNEKKIAEITSKVPEKSMNGFYIDPFYPLRNGAAVASFGDHRFYTYGGNDVSESW
                     HLGLDLASTAGAKIATSNPSVVVFNEENGIYGQNIILYHGFGLYTLYGHCNSTNVNVG
                     EQLSVDAFIGTTGTTGLALGDHLHFGVLVQGIEVRPEEWMDNKWMKDNVYDVLELSKK
                     VIDKKI"
     gene            26858..27760
                     /locus_tag="RPW04_000359"
     CDS             26858..27760
                     /locus_tag="RPW04_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family isomerase"
                     /protein_id="HDX6294479.1"
                     /translation="MKKYRIYQVDSFTTQKLYGNPAGVVTNADGLNDEQMQRIARELN
                     NSETAFILSPKDASHDVWVRFFTPTSEVPICGHATIAAHYARAIELGLDSTKVVQKTG
                     AGNLLVDINRCGNDYSIVMTQGEIKIGEPFSWQIVQKLTEALGIKSDDLNSKCPVCIA
                     STGHSKVTIAINLNSVLHSLKPNFELLISLSKEIGCNGYYVFTLDQNAEILVHGRMFA
                     PAIGINEDPVTGNANGPLGAYLVHYELFGNSDLRSFKFKAMQGEAIGRTGVMEVNVTK
                     EGTRPTLVQITERAVIVFSAELEV"
     gene            27833..28717
                     /locus_tag="RPW04_000360"
     CDS             27833..28717
                     /locus_tag="RPW04_000360"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HDX6294480.1"
                     /translation="MKQTTISKKVEGVGIGLHKGEPIKLILEPLEANMGIVFYRSDLG
                     SSFKAEPKNVINTQMATVVGNEKGSVSTIEHLLSAINSYGIDNIRIVLDANEVPVMDG
                     SAISFCMMLDEAGVIELEADKKVIVVKKEVEVRDGDKYVKVTPSKNPKFNYTIKFENP
                     IIGKQSYTFEFSKENFLNEIARARTFGFLKDVQKLNSMGLALGGSLDNAVVIDDSRIL
                     NPEGLRFENEFVRHKILDAIGDISLLGAPMVGDYEAYAGSHDLNHKLTVALLSDEKNY
                     EMVTLDEQKAKEYAKAFA"
     gene            28756..29160
                     /locus_tag="RPW04_000361"
     CDS             28756..29160
                     /locus_tag="RPW04_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoprotease"
                     /protein_id="HDX6294481.1"
                     /translation="MLIGIYENDTLIKELCSDQKASESLIAFLDEISSEFVISSITYA
                     NTPGSFMGLKVSYVILKTFCIAKNIGFWAVSGFELNDFGAIRANKNLSFVYSKDGISL
                     QKIEQTDFKLPNNLSNLNKKCDTLPEYIIDAI"
     gene            29169..30050
                     /locus_tag="RPW04_000362"
     CDS             29169..30050
                     /locus_tag="RPW04_000362"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009294322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDX6294482.1"
                     /translation="MKILTPATSANLGPGFDSLGLSLKLYNEVTITKQNFTSVCISGE
                     GSDKIGLKKNNTFVNIFNETMLYLTGKTPNFRFNFINNIPFSRGLGSSSSVIVGAIAS
                     AYHMAGFKVDRALVLNQALKYESHPDNISPAVWGGFTSNIVHKGTVYTQKADISSDLR
                     AVVVIPDKPTSTKQSRGKLPKTYPMADVISNVSHAAFLTACFIKQDYENLRLASIDKM
                     HEIRRMHGLKELFRVREIAYLSGALMSNLSGSGSSFLNLAHKDRAQTLRDILQLEFPE
                     FKVEIYELDNNGFILQS"
     gene            30102..30317
                     /locus_tag="RPW04_000363"
     CDS             30102..30317
                     /locus_tag="RPW04_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF448 domain-containing protein"
                     /protein_id="HDX6294483.1"
                     /translation="MCVVCKGRFFQNELFKFACVNGEIQINSKNTRSFYLCKTCIQKD
                     KKDLKKPLSRFSKNSVNLKEILADGKH"
     gene            30304..32820
                     /gene="infB"
                     /locus_tag="RPW04_000364"
     CDS             30304..32820
                     /gene="infB"
                     /locus_tag="RPW04_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDX6294484.1"
                     /translation="MANIRIHEIAKELGYSNKEILEKAKELGFKVTTSSSAVTPEDAA
                     QLYDYVQSGKKPESPEKKDIKQNTQKEAPETQTQQKPIEQEVETKQNIDSTPIKVEPK
                     QESLASSTLSKRRGLVIVKKKKVEVQPIQKQQSEPINKGLEAIFGSSDENLKKKKKEK
                     KPIIATKKENSAKIDLLSAISFSDDISIDDEDVVVLPDLTVKPIEIERQNTVKKQINV
                     YKTSQNNSFSFEGGIQRNSRKKHKKVVKDKDNEDISSVDIPKEIRLYEFADKIKKSSS
                     EVIAKLFILGKMTTKNDFLEEDEIEILGAEFGIEVNIVDTKEDFDYVKAYEDEILEDN
                     SVSRAPVVTIMGHVDHGKTSLLDYIRNSRVASGEAGGITQHVGAYMVEKSGKNITFID
                     TPGHEAFTAMRARGASVTDIVIIVVAADDGVKPQTKEAINHAKAAGVPIIIAINKMDK
                     ESANPDLVKTGLAELDILPTEWGGGYEFVPISAKTGIGIEDLLEIVLLQAELLELKAN
                     PDREAKATIIESSLQKGRGPVATAIVENGTLRVGDTIVAGVAYGKVRALQDDKGNSLK
                     SIKPGECGVIIGLSEVPDAGETLISVKTDKEAREYAQKKYDYLRQKELSKSTKVTIDE
                     LSAKIAEGELKSLPVIIKADVQGSLEAIKASLEKLKNDEIKVDIIHSGVGGISQSDIT
                     LASASSNCVILGFNIRPTGDVKEKAKERSVEIKTYNVIYNLIDDVKALLSGLMSPIIS
                     EEELGQAVIRQVINVPKIGQIAGCMVTDGSINRGAKIRVIRDGVVVFEGNVSSLKRFK
                     DDVKEVAKGYECGVGIEGYNDMREGDYIESYKEVESKVEL"
     gene            32817..33185
                     /gene="rbfA"
                     /locus_tag="RPW04_000365"
     CDS             32817..33185
                     /gene="rbfA"
                     /locus_tag="RPW04_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDX6294485.1"
                     /translation="MNAAEVKRLRTESVLKELIPEALSSLDDIYLKGLCVTDVECKKG
                     RYDAFVYLDKMMLDDKEQSYVLEHLKRVSKHIQNHCMSAEGWYKAPNFHFKFDDRLEY
                     QNHIDKLFSKVSDELDKGKK"
     gene            33182..33604
                     /gene="rimP"
                     /locus_tag="RPW04_000366"
     CDS             33182..33604
                     /gene="rimP"
                     /locus_tag="RPW04_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDX6294486.1"
                     /translation="MTDLSNLVSQCGVDLYDAEVVNENGRVIYRVYITKNGGVSLEEC
                     EAVSKLLSPIYDVMPPVSGEWILEVSSPGLERKLSKIEHFTLSIGEFAKIILNDKTEI
                     KGKIVSVKDDNICINIKNNESIEVKFENIKKAKTYMEW"
     gene            complement(33606..33857)
                     /locus_tag="RPW04_000367"
     CDS             complement(33606..33857)
                     /locus_tag="RPW04_000367"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294487.1"
                     /translation="MEYIIYCESICGEKRYFMIQDKFSTLPYIVRNSGIIYKVIKYMK
                     INEKNIENEIMEKVYHPNCFFYDINTLYAEKNSWQKVEW"
BASE COUNT        11424 a         5315 c         6278 g        10865 t
ORIGIN      
        1 tcataatttt ttattacttt tagcagagag aaaaagactc ggtttgatcc cggagatttc
       61 aaaagaattt gagtatcaac aagccgtaag agactgcaaa tttagcggtc taatctctgg
      121 taattttgag ctaagcgctg ctcaaaaaac tgagcttgaa gagagatttt ctaagaaatt
      181 tggtgcaaaa atagaatttg aaaacataaa aaataactat aacggtatca aaatagagct
      241 agatgacctt ggtgtggaag ttagtttttc tattgataga ttaaaggctc aaatgagcga
      301 atatatttta aaagcaattt aataaggagt aaaagcgtga gtgtaaaatt aaaagctgat
      361 gagattagca gtatcatcaa agagcgcatc gaaaattaca acttaagcgt tgatattgaa
      421 gaaactggta aagtaatatc agtcgctgat ggtgttgcaa acgtttatgg actaaaaaat
      481 gttatggccg gtgagatggt tgagtttgag accggtgaaa aaggtatggc gttaaatctt
      541 gaagagagta gtgtcggtat agtcgttctt ggtaaatcaa gctccataaa agaaggtagt
      601 agcgtaaaaa gacttggaaa gcttcttcgc gttccagcgg gcgacgcttt aataggacgc
      661 gtcgtaaatg ctctaggcga gcctatagat gcaaaaggag ctatagaagc tacagagaca
      721 agatttattg aagaaaaagc aaaaggtatt atggctagaa aatctgttca tgagccgctt
      781 caaacaggta ttaaagctat agacggtttg gttccgatcg gccgtggtca aagagagctt
      841 attatcggtg atcgtcaaac aggtaagaca acagttgcta tagatactat tatcaaccaa
      901 aaaggtcaag acgtaatctg tatttatgtg gctataggtc aaaagcaatc aacagtagct
      961 caagttgtta aaaaacttga agagtacggt gctatggact atactatagt agttaatgca
     1021 agtgcaagcg atgctccggc gttacaatat cttgctccat atgcaggtgt aacaatgggt
     1081 gaatatttcc gtgataactc acgccatgct cttattattt atgatgatct aagcaagcac
     1141 gctgtagctt accgtgaaat gtcattgatt ttaagaagac cgccgggtcg tgaagcatat
     1201 ccaggagatg ttttctatct gcactcaaga ctgcttgaga gagctagtaa gctaagtgat
     1261 aaactaggag cgggaagtct tacggctcta cctattatcg agactcaagc aggtgacgtt
     1321 tcagcgtata ttcctacaaa tgttatttct ataactgatg gtcaaatttt cttggaaagc
     1381 gacttgttta actcaggtat tcgtcctgct attaacgttg gtttgtctgt tagtcgtgtc
     1441 ggcggatcag cccagataaa agctattaaa aaagtttctg gaacactaag gcttgatctt
     1501 gctcagtatc gcgaacttca agcttttgct cagttcgcaa gcgatcttga tgagagtagt
     1561 agaaaacaac ttgagcgcgg acaaagaatg gtcgaagtgt taaagcaacc tccttatagc
     1621 ccgctccctg tagaaaatca agttatcata atctacgcag gtagtcaagg atatcttgat
     1681 gatattccag tatctgcagt tactaaattc gaagctgaat tatatccgta tatagaggct
     1741 aagtatcctg aaatttttga gcaaattaga aataaaaaag ctcttgataa agatatcgaa
     1801 gaagcactaa gcaaagcatt gaatgaattt aaagcaacgt ttagcgctga ataaggctaa
     1861 gatatgtcaa atttaaaaga tataaaaaga aaaattaaga gtgttcaaaa cacgcaaaaa
     1921 actacaaaag caatgaagct agtttctact gcaaagctta aaaaagcaga agaagctgct
     1981 cgtcattctc gtgtttatgc tcttaaaatt aatgaagttt tgagcgagat agcttataaa
     2041 ataaatcaat ttaagatcgt aggcaaagac gataagtttt ttgacttaaa agcctctata
     2101 aacaaagttg atattatttt tgttactgca gataaaggac tttgtggagg atttaatatt
     2161 tctactataa aaactataag aaatatgata gaagagtata aatcaaaaaa aatcaaagtc
     2221 agactaagag cagttggtaa aaaaggtata gaattcttta attttcaagg tgtagaaatt
     2281 ctagaaagtt ataaaggaat cagctctgca cctacttatg ataaagcaaa aggcgttata
     2341 gcttcagcga tcagtgattt tgtagcagga gctaccgata aggttatttt ggttcataat
     2401 ggttataaaa atatgatctc tcaagagata agaataaaca ctatagttcc tgtagaaacc
     2461 ccgtcgatag aaaatgttga gcactctagt tcccttatgg agattgaacc agaaaatgat
     2521 gagaagatat tagaagagtt gatgaaaaaa tattttgagt atagtatgta ttatgctcta
     2581 atagactctt tagcagctga acatagcgct agaatgcagg ctatggataa tgctacaaac
     2641 aacgcaaaag caagagttaa agagcttcag cttgcttata ataaggcaag acaagagagc
     2701 attacgacag agcttataga gattataagc ggtgtcgaga gtatgaagta aatttagaag
     2761 gagagataat gaaaggtatt attagccaag ttatgggtcc tgtagttgat gttgatttca
     2821 aagactactt gcctaagatt aacgaagcta ttgaagtaaa ttttacagta gaaggcaaca
     2881 cgcataaact tattttagag actgctgcac accttggaga taatcgtgta agaactatcg
     2941 ctatggatat gagcgaagga cttacaagag ggttagatgc tatagcgctt gggtcgccta
     3001 tcagtgttcc tgttggagaa aaagttttag gaagaatatt caacgtaatt ggtgatctta
     3061 tagacgaagg cgaagaagaa aaatttgata aaaaatggtc gattcataga gatccgccgg
     3121 catttgaaga tcaaagcaca aaaagtgaaa tttttgaaac aggtataaaa gtcgtagatc
     3181 ttttggctcc ttatgcaaaa ggcggtaaag ttggactatt tggcggtgcc ggcgttggta
     3241 aaacagttat cattatggaa cttatccaca acgttgcatt caaacacagc ggctattcgg
     3301 tatttgccgg tgtcggtgaa agaacaagag agggtaacga tctttataat gaaatgaaag
     3361 aatccggcgt tttggataaa gttgccttat gttatggaca aatgaatgaa ccgccgggtg
     3421 caagaaaccg tatagcgctt actggtctta caatggctga gtattttcgt gacgagatgg
     3481 gactagatgt tcttatgttt atcgataaca tcttccgttt ctcacaatca ggctcagaga
     3541 tgtcggctct tcttggacgt atcccaagtg cggttggtta tcaaccaacg ttagctagcg
     3601 aaatgggaag acttcaagaa agaatcacat caactaaaaa aggttcgatt acatctgttc
     3661 aagccgtata tgtaccggct gatgacctta cagacccggc acctgcgaca gtttttgcac
     3721 accttgatgc aacaacggtt cttaaccgcg ccattgccga aaaaggtatc tacccggcgg
     3781 tcgatccgct tgattcaact tcaagaatgc tagatcctca aattttaggt gaagagcatt
     3841 acaagattgc tcgtggcgtt caagccgtgc ttcaaaaata caaagatttg caagatatta
     3901 tcgcaattct tggtatggat gagcttagcg aagaagataa acttacagtt gatagagcta
     3961 gaaagataga aaaataccta tctcaaccgt tctttgttgc agaggttttt acaggtagtc
     4021 ctggtaagta tgtaagcctt gaagagacaa ttgccggctt taaaggtatc ttagaaggca
     4081 aatacgatca attaccagaa aatgcgttct atatggtagg aaatattgat gaggcgatcg
     4141 caaaagctga aaaaatgaga gcataagcta aaaaggaagc gatatgaata caatacattt
     4201 agaaatagta actcctgagg ggcttatatt ttcaaatgat gctaaaatgg tagtacttcc
     4261 tggtagtgaa ggcgagttcg gtgtgcttcc tgggcatgcc tcacttgttt cgcttttaaa
     4321 aatcggtgtt gtagatatag aaaatgttga tgggactcac gacgctgttg ccatagactg
     4381 gggttatgtt aaaatagatg aaaataaagt aatcgtttta gtcgatggtg ccgtgtatgt
     4441 agctggaaat agcgaaagtg agattgctca gtctattgaa aatgcaaaaa ctcttgttaa
     4501 acgtatgagc gatggtaatg gtatattagc cacagcttta gcaagaatcg aaaatgctgc
     4561 gagggcaaga taagtgcttg gttttttaga tcttcttcta aactatttat caaaaagcag
     4621 tttagtgaca atcatcgttt taagctggtt gtcgctatac tttgttatta gttttacaat
     4681 acttttttca agatatatcg gacttaacaa ctggataaaa aaagaacaag ttgctcttga
     4741 gtctatttta atgggaacaa aatccgatct tgttgattca tcacttaaaa agtgtgcgtc
     4801 tggcagaatt acaaaagaaa aattagacgt ttgcattagt ttggctgaag caaacgctac
     4861 aagtggtctt actatgttat caattatagc ttctacatcg ccgttcatag gtctgtttgg
     4921 aacggttata agtatacttg aaacttttgc aggacttggt caaggtggtg gaagtagctc
     4981 gcttagtgtg attgcgccag ctatctcaga agctttggtt gctactggat gtggcatatt
     5041 tgtggccatc ccggcttata gttttaatct tcttataaag agaaaagcat atgaaattat
     5101 cagcatcata agaagagaag caaatatttt agttagtata aaagaagatt atagccaaaa
     5161 tgataaattt tgatgaaaat ccagagttaa atattactcc tctggttgat attatgctag
     5221 ttttattagc tatacttatg gttacaactc cggctatcgt ctatgaagag caaataacac
     5281 ttcctgatgg ttcaaaaagc aaagcagtat cccaaaattt aaaaactctt actgtaagaa
     5341 tagacgctca aagaaaagtc tatataaatc aaagcgtaat gagcttacca gaattaggcg
     5401 ataatttaat tcttatctct caaaagtacg ataaaaactc cccggtatac ataaaagccg
     5461 ataaaagact aatttatgat gatgtaatgt atgtcttaaa aactatgaaa aatgccggat
     5521 ttactaaagt cgcacttgaa accaacggat aaaatgtcaa gaaaaatcgg tgcaaaatat
     5581 cctactttaa actcttttgt agtagcgatt tttatctatg tttgtataat tatatcttta
     5641 ttttataaaa tttatacagc agaagaccca aaaaaatata caaatcagca agatgctttt
     5701 atggatgtat ttgtagtgca aaccgaggtt gcagatacta taaccgctcc aaaaaaagca
     5761 gaagaaaaaa tagaagctaa gttaacagaa gaaaaagagc aagaagaagt aacaaaaact
     5821 acaaataagc agaatccaaa accagtagag gagccaaaac taactcctgt attagatcca
     5881 aaacccgctc ctagcgtaaa tttaaatgag ctttttagcg atgtaaaagt agaacaacca
     5941 accccaaaac caaaagaaca agctgttcaa agcaataaaa agagcgataa aaaaacaagt
     6001 tcatcatcaa aaagtgctac tgatatatta aatgctttac aaaaagatat cactgcaaaa
     6061 gcacctccgg ccggtatgac cggagaatat aataaattta tgggtgatat tacagaaatt
     6121 attcaaagaa aatgggtatc atacaaagct gatacaaata acgatgctaa ggttcaaatt
     6181 ttcatagata aatttggaaa gtttagttac aatatcatct ccttgtcgta caacaaggaa
     6241 tttaacagca aggtaaaaga atttttagag agacttaaag agactcagtt tcctacgcct
     6301 cctacaaata ctacaacttc tgttgcttta acattaagag atcaaattga tacggagata
     6361 caatgagaaa attgtttttg ctaattgcct tttgtatagg gcttagtgcg gcggatgcga
     6421 ctatagaggt cgttaacaaa ggattagttt tacctagaat agtagttcaa gatgcgacta
     6481 cgaactttgc taataacaca cttaaaaata gattttttaa gctaatgata ggagatttaa
     6541 aagtaggttc atcttttgaa gtaattgaag attattatac tagtagttat gatggagatt
     6601 tcagaacaaa tttagctaat gacaaaaatc cagaacttat actaagatac gctcttgggg
     6661 tagagggaaa tggattaact ctaaaagtta agttgctaaa tgcgaaaaac ggcagtgtga
     6721 gatttgaagg tacttttagt caagcagaac ttgccaaatt cccgttttta gcacataaaa
     6781 gcattgctac gatagctaga aatttaaatt tatctcctat tgattggatg gataaatcta
     6841 ttataatttc acaatacaca tctcctggca aaagtaatat tatagttgcc gattatactt
     6901 taacatatca aaaagtaatt cttagcggcg ggttaaatat atttcctaaa tgggcaaaca
     6961 aagatcaaag tgcattttac tatacaacgt atataaattt agttcctact ttgtataaat
     7021 atgatttagc tactggtaaa aaaactaaaa ttacgcaaag cggaggtatg ttagtcgcat
     7081 ctgatgttag cagcgatgga actaaagttt tactaactat ggcgccagac gatcaaagcg
     7141 atatctatat ttatgatact acaactaaaa aaaagagtag aataactgat tttaaaggta
     7201 ttgatgttaa tggaaatttt gtagataatg atacaagagt tgtatttgta agcgatagat
     7261 taggttatcc aaatatattt gcaactagta tcaatggtgg tgcagtagaa caaatggtat
     7321 ttcacggtaa aaataataac tccgtaagta catatcaaaa ttacgttgtt tattcaagta
     7381 gagagagcgt tggcgattac tctgctaaaa catttaatct atatctaatc tctacaaaaa
     7441 gtgactatat aagacagctt acatcaggag gagtaaatac ttatcctagg ttttcaagtg
     7501 atggaggaag cattgtattt attaaaaatg ctggcaacga gagtgccgta ggcataatcc
     7561 gtgttaatga aaataagagc ttccaatttc cattaagaat aggtaaattg caatcaatag
     7621 attggtaatt tttttggaat tttttaaatt taaatgacgc aaaaattgta aaatatgata
     7681 taattgcgac aaaattttta ttcaaaggta ggaaatgaaa aatttagttt tagtttcagc
     7741 tgttgctgct gctttattca tagctggttg tagttcaaaa tcaccagaag tagatatgaa
     7801 tgcagatgca aacaaaatgt caaacaataa tggtatgtca aatactgaca caatgagcga
     7861 tgcagagaga ttaaatgctc taatgaatca aattcaaagc caagttaaaa atgtttattt
     7921 tgattttgat aaatttaata tacgccctga tatgcaaggt gttgttggta caaatgcttc
     7981 attatttaac caaaatggtg cagatagcct aagaattatg gttgaaggaa actgtgacga
     8041 gtggggtagt gatgagtata actacgctct aggcgtaaaa agagctaaaa ctgctaaaga
     8101 tgctttagta gctcaaggcg taagtgcaga tagaatcgag attacaagca atggcgagag
     8161 caaacctgta tgtactgaaa gaacaaaagc ttgcgacgct caaaatcgtc gtgatgagtt
     8221 caaaattctt ccataattta tgagaagaga tctttttata gcagcctttt tatgggctgc
     8281 atcttcttta ttcgctgaaa tttcagtatt tgatgcaggt aatttaaatc aagataatcc
     8341 gtatggactt acagataatg aaaagattct actaaaaaac aaagaaaaag ttgaaaaatt
     8401 aaaccaaaat atcggctcag ttcagtctga tataaatgta gcacaagaga atatcgaagg
     8461 cttaagaagt atcttagatg gcttaaatca gacaaattta aaactagaaa acagagccac
     8521 cgatctagaa aacagagtaa attctataga tctaaatctt acaaaagaga ttacagagtt
     8581 aaaaagtata gtaaaacaaa ataaaactat acaagatgaa aattataaaa aaataactaa
     8641 agccatatct gagctaagcg cattgataga ttcggtagtt gcaaatcaag cagcggaaaa
     8701 aaatagtagt tccactataa aagataacaa gatcgaagat acgaaatcgg taactaaatt
     8761 tgatgatatg aatctcgcag atgtcttaaa agacgccgat acttcttata ataataaaga
     8821 gtatttaaaa gctagtgaag catatgcttt tttagtaaag aaaaagcata aacctgctta
     8881 ttcaaatttt atgcttggcg agatagaata cacaaataaa aactataaag atgctatacc
     8941 gtactaccaa aaaagtgttg aactgagtca gaaaggcact tatatgccaa aacttttgta
     9001 tcataccgca attagttttg ataaaatagg cgatacaaaa aatgctaata aattttataa
     9061 tgcattgaga caagcatatc cagatagtaa agaagcaaaa gcttcaccgg tacgtaaata
     9121 attcaacctt aggagaaaat aatgtcaaaa gtaataaaaa tgttttatga gcttaaagat
     9181 gcaaaaacag gtgagctttt ggagtcaaat atagatgcac aagaaatcgc atttgttaca
     9241 gggaaaaatc aagttttaga agctttggaa aacggagtta taaatcttaa agtaggcgaa
     9301 aatgctaccg tacgcatacc tgctagcgaa ggtttaggtg aatatgatga tagcgctctt
     9361 caagtacttc caaaagaaca atttgcagga atagagttaa atgaaggtat ggagctcttt
     9421 ggcgagggcg aagacggaag cactgttaga gttactgtaa aatcaatcag cgataatgat
     9481 gttactgtgg attttaatca tccatatgcc ggtaaagacc ttgagtttaa tgtaaaaatt
     9541 actgaaaata gagacgctga tgcagatgaa gagctaactg gcgtagttgt tatgcctcac
     9601 gtttgcggtt gtggcggagg aagtcatcat catgatcact atggcgaagg atgttgtggt
     9661 ggaggtcatc atgatgagca tggcggcgga tgctgcggaa aacatcatca ttaagagtat
     9721 atatgatgag cgatgttgcc tttttatttc ccggtcaagg ctctcaaaat tttggtatgg
     9781 gggctgaaat ttatgaaaat ttcaaagccg caaaagatct tttagatagc gctagtgatt
     9841 tttgtaagat tgatttcaaa gaacttatgt ttaaagaaaa tgatcgctta agtatatctg
     9901 aatttactca gcctgctatt gttttaaatt cttttatgtg ttttcttgct ttcaaagaaa
     9961 atatcgatat caatgctaaa tttacattcg gtcactcgct gggtgagttt tctgctatta
    10021 gcgttagcgg cggttttgat atgctaaatg ctataaacct tgttcatcta agaggtaaat
    10081 ttatgagcga agcttgtcaa ggtaaaaatg ccggaatgat ggttatcctc ggtttaaatg
    10141 atgatatcgt aaaaggtatt tgcgaaaaat catcaaaaag cgtttgggct gcaaattata
    10201 actgcgatgg acaaatagtc gtagccggag taaaaagcga tcttatagag cttgagccag
    10261 tatttaaaga agccggtgct aaaagagcta tgcttttaga tatgagcgta gctagtcact
    10321 gtccgcttct tgatagtgct agtattaaac tttatgatga gcttaaatct attataaaag
    10381 atgagttttc tcctgttata tcaaatgtta cagctaaagt ttatactagt aaaactgaag
    10441 ctttggagct cctaaaactt cagctagtaa aacctgtttt gtataaacaa agtattaaaa
    10501 actatgaaaa cgatgttgat tgttttatag agtttggttc tagcgtacta aaaggactaa
    10561 acaaaaaaat aacatcaaaa cctacttata gcatttcaaa tttaagctct ttagaagaga
    10621 gtttgaagga gttggcatga aaatagcaat tcttggcgct atgcctgaag agatcgctcc
    10681 gcttttaaat aagctgcaaa attacgaaac actaaaatat ggcaaaaacg agttttatct
    10741 agctaaatat aaaaatcacg agcttgttat tgcttattca aagataggta aagtaaactc
    10801 taccttgact gctactttga tgattgaaaa attcggttgt gaaatactgt tatttacagg
    10861 agttgccgga gcattaaatg aaaaattaaa gataggcgat atcctttatg ctacaagtac
    10921 tgttcagcat gatctcgata taagcgcgtt tggtcatcct tacggttatg ttcctggtat
    10981 aaacgtgtat gaaaaaacag atgaaaaact aaataatata gcaaaaaaag ttgctgctaa
    11041 caacggcgta aatcttgtta gtggagttat agctagcgga gaccaattta tatgtgatcc
    11101 tataaaaaaa gagtggatca aatctacttt tgatgctgat gccgtggaga tggaaggtgc
    11161 tagcgtgggt caagtatgcg ctactcttga tatcccatat tttttgatga gagccataag
    11221 cgatgaagca ggcggcggtg ctgagatcga ctttgataag tttgtagtag aagttgcaaa
    11281 tacgtctgct aaattcgtac ttgatatggt tgagtattta tgatagatct gagtaaaaaa
    11341 ctcattcgtc aagtaggtca aacaaacgcc aaatataaga tgtttgagaa aaacgataaa
    11401 atacttcttg ggctaagcgg cggtaaagat agcttggctt tagctcatat actaaagcat
    11461 tttcaaaacg ttactcccga taaatttgag tttgaagccg taacgcttag ttatggtatg
    11521 ggtgaggact atgcatattt aactgctcat tgcgagaaac atggcataaa acatagcgtt
    11581 atcgatagct ctatatttga aataagcaaa gataaaatca ggaaaaattc gagtttctgt
    11641 agctttttta gtcgtatgag acgcggatat ctttatactt atgcgcttga acacggtttt
    11701 aataaactag cgatcgctca tcatcttgat gatgcggcag agagtttttt tatgaatttt
    11761 acttataacg gcgctttaag aacgcttgct ccaaaataca gagcaaaaaa cggactagtg
    11821 ctgatacgac ctctcataaa tgttagagag cgtcagctta gagataatgc tactaaaaac
    11881 aatctttttg tgataggcga tgaagcgtgt cccgcaatga gatttgacgt gaaaatgcct
    11941 catgcaaggc atgaaacaaa acagctttta gcagggcttg aaaaagaaaa tccaaaacta
    12001 tttaccagct tacaagctgc gtttgaaaat atacatagag atacgttttt tgatttgaac
    12061 gagcagctgt aatagtcttt aaatttaaat atatttagtg cgatttctat tatatcggat
    12121 taataaattt attaaattta ggaactattt taattgctct agtctctctt ttttagttcc
    12181 tatctcagtg atctgaactc caaagtttcc atctactata acaacttcac caagagcgac
    12241 ttgcttatct cctatcagca cctctaaagg atcatttgct agttgattta gctctataac
    12301 tgatcctata tccatagata aaacatcttt tagtagcatt tttttagatc ctattctaac
    12361 tcttataggg agtctcacat ccatgataag accgatattt tttatttctt ctgttatatc
    12421 tgcttttaga tgcggtatct cttttgtatg tttttcatct gatttattga agtatttgtt
    12481 gaatgcaaaa tcaataacta agccgatatg ttcatttata tcacccattg taacgggaca
    12541 taaaaatagt ttttcatatg aacttaaatc tagaatttga ttttcatcta ggtagactac
    12601 tttttgaatt tcaaagctta gttttggcat atctttagca gccgttaaac tagtagaaat
    12661 tgcacttaaa atattagaaa atatctcttt gctagcatct agttcatcgt cgcctatatt
    12721 taagttttta gtaggttctt cttcacctaa cataagatca tttatggcag ttattagaag
    12781 tggagtagct atgaagatta tcttgccgtt tatatctccg ctgacgttga tatttgctac
    12841 tactataggc gtttgaatac cgttttgagt cgcagcgtca aactcagctg tttcacctat
    12901 tgccggtgag tttcctgtaa gtccttctat agtggctttg cattcatttt taaatatatc
    12961 taaaaatcta ttcatcgtcc tcttcttcct ctgtttcttc agtttcttct tgatatgcca
    13021 taagctttgc tttgcgctct tcttcatact gttctaagat attttttatt tcatctttat
    13081 ctgtttttat aagctcttct atttttatag attttctaaa tctatgaagt ccgatttgag
    13141 ctaaaaatac atctttttta tctatacaaa ctatagcttt gtcatcagcg cttttatcga
    13201 gccttagtat atcaccttct tgtaaattta aaaactcgtt tacacttata acggttcttc
    13261 caagtatagc ttcataaaga acttcagcgc gccctatcaa tgtttttagc tctttgtttc
    13321 tacttttttt agcgcttgtt tctcctagca ttatatcacg gtttgcaagg cgactaagga
    13381 ttggttcaag ataaataact ggataacata tatttatcat accgctagag tttccgatta
    13441 taatctccat aacaaccata atgacaatct cattttgact tacgatttgt acgacgttcg
    13501 ggctagattc tttggcttct acgtttggat acatatcagt tatcatcgac caactctctt
    13561 ttaagcgttg catcattatg cgaagtatcg catcaagtag gtttatctcg atatcggtca
    13621 actctctatt gctttcaaaa ccgtccccgt ttccgcctaa aagacgatct atcataggaa
    13681 aagcaatact tggatttatc tccaaaacac aatttccatc aagtggtttt attgaaaata
    13741 cgttgaaact agtcggactt ggcaagctca tcaaaaactc tccataagtc atttgatcaa
    13801 ccgagtgaag tctaatttct actatacttc tcattatact agaaatttga gaagccaaat
    13861 ttctagctaa cttatcgtga attcctttga tagctcttag ttgttctttg ctgacacggt
    13921 taggcctttt gaagtcatag attactactt gtttttgatc ttctgggtgc ggagtagtat
    13981 ctactactgc cgcatcgccg tcttcatcta cgacttgaag tagggcatca atctcttctt
    14041 gacttaaaat atctgccatt aaaagcctag cctttctcta atttttgtaa tgagtctttt
    14101 atgaatttga ctaattctag attcggtaat acctaaaata tcactaatct cttttaaact
    14161 tagttcctca tagtagtaaa gttgtattat catctgttct cgttcgccaa attcgtttaa
    14221 aacgtccgtg atcttttgta tgagttcgtc tttttctatt ttgctttcgg tatctgattc
    14281 gctaagaagc tgagattgtt catctatggg gaatgtagcg gatacatcac taagatttct
    14341 agcctctctt atctttgctt catcttcacc taaaatcttt gctaaataag catcgtcagg
    14401 ttcgcactca aatttattaa aatactcgtt tatagcgttg tctatatctt ttactagttt
    14461 tctatttcct ctactaagaa aatcaagacc tcttaaataa tcgatcatag aaccataaac
    14521 tctttgtttt acatatcccc agaagctatc gttctgctct ttatcgtatg ttcttgatag
    14581 ttttaccata gcagtagcgc ctacgcttat tagatcattt acttctatgg agctaggaag
    14641 tctggattta agtctaaaag ccatagctct aagagcaggc atatatgata aaacgagttc
    14701 atcttggctt ttttttatct ctttttgata agcgtcaagc tgcttttgct ttaactcgtt
    14761 catgtttttt acctgatttt tttagtatga tgttttcatt tgttttttgt atcgcacctt
    14821 ctagtttctt ttcccttaaa gctaattccg ctattagata gtcatttact tcttcatacc
    14881 tgtctttgtt gaaatacctt cgacctattc tatttgcatc aacatagttc atgataacta
    14941 tatgaataac caaatagaag aaaaatgtaa ttagtaaagt atataaaata agctccatag
    15001 gttcattagt ttttacaact acaaacataa gacctatgaa aaatccacaa acagtgaaaa
    15061 aagctataaa gttttctgct ctcacataat taccttaatt aaaattgttc tacaagacgt
    15121 ttaaaaaatc caccaaagct tctatcttct ttatcgtcaa gcacttttcg ttccaactta
    15181 taaagcagcc tactagcagc ttttttgagt tgtatactag gactgatatg tggcacatca
    15241 tcgctaaaaa gcgtcctttg ttttatactt ttagatacca gtttatcggc ttctaaatat
    15301 cctagtagtt ctagatctag ttcacttttt atatttgttt tggctacttt ttttatattt
    15361 tcatatattc tgatagcttc attttcattt ttgaccatat ttaatatcat aaatatatct
    15421 tttttcatct ttgatgttac ttttattgtt gcgtaagcat cagttatagc agctggatca
    15481 ggaaccgtca caactataat ctcatcacac gcttctaaaa acacctgagt actagctcct
    15541 atacccgctc cggtatctat tatcataaaa tcaataccgt ttagtatgct agcttctgag
    15601 ataaactttt ctagcacgaa ctgatcatta aatttaaata tatcatcacc gctttcacct
    15661 ggaattaata taagattatc ttttactttg actaagatat ctgatagttc gcattcgccc
    15721 tttagtacgt ttaaaagatt tttttgaatt tttacattta agatgacgtc taaattcgca
    15781 agacctatat ctgcatcaaa aagagctact ttgtatccgt tttttgctaa aatatttgct
    15841 aaatttgcac ttatagttga tttaccgact ccgcctttgc cgcttgttac ggctataaag
    15901 tgagttgatt tttttatttt gtttgatatc ataagctctc ttaacttatc tgcttgatcc
    15961 atcttcatct cctttattaa agccatctaa aacacactga actaaaaact cgctttttgc
    16021 ctccattatg tcatctggaa cgttttgtcc ggttgagaag aagctaactg gagtattcgt
    16081 gtcatatact agtgaaaaaa catttccaaa gatttttgtt tcatcaaatt tagttatgat
    16141 taacgtatcg atatctaaaa atgagaaatt attgtaaatt tcaatcaaat cttcaatttt
    16201 tgaacctgcc gataaaacta aattcacatc tatttttgtt ccgcatcctt ttaaaaagcc
    16261 gtttaatttt attagtttat ctttgtcgta ttgactgctt cccatagtat ctataagaat
    16321 aagatcacag cttgctaaac tctttaatgc tgatttaaaa tcctctagtt ctatagcgtc
    16381 aagtatcggt atactcatta tcttagcata ctgaaatagc tgctctactg ctcctaatct
    16441 atatgtgtca agagttataa tgcctgtttt atatcttata tctcctgaat gagcaaattt
    16501 ataagctagt tttgaaagag tcgtggtttt accgactcct gttggtccta caaacatcat
    16561 aattctttgc tttttgcttt ctaaactttc gcttctgcaa ggcaacatat ttctaagaag
    16621 cgagtaaaaa tatcttttta ccgcagatgg attgtttttc atagaagcgg gcatattttg
    16681 tatagtggtt tgcataatgg cttttagatg ctcgtttttc ataccgcttt gttttgctaa
    16741 tttatatatg gtagaaaatt caggcggtat agtgatatcg cctctagctt cagctttatc
    16801 atcccatatc atatctgcta tcatagatat tttgtcattt agtttattta cctgttttgc
    16861 tacgtcatct atttttttat tgtactcttc attttcggtt tgattttgga tcgagatatc
    16921 tggcaaactt gctactttgc ttatctcttt agctgctttt gatatattta aaagtacgct
    16981 ttcatctata ctaggagggg ctaaaggagg tttttcgtaa gcctttgtgt acgccgatat
    17041 ctgctgtttt atctctttta tactctcttt tgtaggagat tttgtctctt cttcaacgct
    17101 tactaaaatc tcataaacag gttttttgtt cagagttttt ggctgaattt gctttgtggt
    17161 gactaacata gcactctcac cgcactcttc tttcgccttt ttaagagctt ctatagcgct
    17221 ttctccagtg aaagttttaa gtactgtggc catcatattc ctttcattag tccaattggg
    17281 attatcacgc taattctctc tttagccccg atatgtggaa ctgtgagttt agctgatttt
    17341 cttacttttt tactaaaata taaaatatca agatcaagtg ttcgtggtgc atttttaaat
    17401 ggtctttgtc ttttaaattt aaactcataa tattgcatta tcttaagtat ctgcgttgca
    17461 tatagcgacg attttatcat tattacggca tttagatagt cctgcgactc atatccaaaa
    17521 gctttatttt ttagtatggg cgaacactct ttgataaaaa aacgtctatc tttttttaaa
    17581 tttagtaaaa aagtttcaaa acgttttttt gtatttccta tatttccgcc aagacctata
    17641 aaggctgtat atttaaattt aatctcttta tcaagcctgt taaataacgg aaaaaactta
    17701 gatctcataa tacactttgc gtcatctaaa tatatagttt gcatcgttta taaaacttcg
    17761 catccatctt ttgttactac aacaacatct tcggttctta tgccaaactc gttttctata
    17821 taaattcctg gttccacgct aaataccatt ccttcttcta agatagtttg actatttttg
    17881 ctgattatag gaagttcgtg tatatcaaga ccgactccat gtcctgttga gtgaaaaaac
    17941 tctttttcat atccaaactt agctatataa tccctagcgg ctctatctac ttcataagct
    18001 gctataccgg gttttaccgc ttttatagcc tctgcttgag cctcttttac tatgttaaaa
    18061 atctcatctt ttttgctatc tttaaatttt tgatttttat caaatttaaa accgttttca
    18121 aaatttatag ttcttgttct atctgaacaa tatcttttaa atttaactcc ggcatctact
    18181 aatagcagat ctcctttttg caatctcagt tttgtaggca tggcgtgagc ctttgccgcg
    18241 ttggaattta tagcggttat aggctcaaaa ctaagcccta attttccgct gtcttttaag
    18301 atattttgtg tgtgaaaatt tatttcttct tcactcaaat ttaagttttt atttaaaaaa
    18361 tttgcaagtt catcgaattt gtaagcccct gttcgcgcag catttcttaa aatatctatc
    18421 tcgaaatctt tttttatcat gcgttttatc tgcgagaagt ttggctttgc tatgaagttt
    18481 atatctaaat tcgagctaag agcgctatat tgtataaaag taaaatcatt tgggttgaag
    18541 tataaatttt ttacgccaag ttttcttaaa agtagcctag cttcttttat gagagaactt
    18601 tgtatctcta tcacttgagc gttttttata ttttgtctgg cttctattga ataacgcgca
    18661 tcggtgatga aaaagttttc accgcaaata cttatatata tctcattatc gcagctatag
    18721 ccgcattcat aaaatacggc attttcatct tttaagataa aattacgcat tttgctgtct
    18781 agctcttact gcttttattt gttcaaaaat ttgaagcatc cccatcattg ctaaatgata
    18841 acctactgga ccaaagccta ttatttgtcc tgcgcaaact ggtgctatta agcttttttg
    18901 tcggaattcc tctctttgat atacgttgct tatatgtact tctataacag gaagtttcac
    18961 cgcagaaata gcatctctaa tagctataga tgagtgcgta taagcagccg gatttataat
    19021 tataccgtca aattcaccaa gacattcttg aattttatct actatttcgc cctcaaagtt
    19081 gctttgaaaa aactcgattt ctactccggc ttgatcggca actgttttca tctgttcatg
    19141 aatattttcc attgacattg agccgtagat atttgtttcg cgtttgccta acatattgat
    19201 atttggacct tgtataacca taattttcat ttgagcatcc atttacaatc cttaaaaaat
    19261 attttaacta cgattgtaca gaaatattgc taaatttttg ctataattgc cttcttttaa
    19321 gaggtaaaag atgaaaatca taaaagcaaa atatatatta acttgtaacg ataattttga
    19381 tattttagaa gatagcgcta tagcttttga tgagcatata aaacaaatat ctagctttga
    19441 taatcttata aaaatttatc cggatgctca aataatggat tttaaagatg atatagcaat
    19501 gcctgcgttt ataaatccgc acgttcatct tgagtttagt tcaaatgttt caagtcttga
    19561 ttatggtgat tttatagttt ggctaaaaag tgtgataaaa actagagata atcttagcga
    19621 gcaagccaaa aataagataa tcaaaaatgc tataacgact atgctaaaaa gcggtattag
    19681 tacgatagga gagatttcta gttttggaaa tgaagccgaa atttgcgccg attctggggc
    19741 gagatttata ttttttaatg aaattttggg atcaaatagc gagaatttat ccgacaattg
    19801 ggataaattt ataaccaaat ttaataatag tttgaaattt aaaagtgata aatttatccc
    19861 cgccgtttct atacattcgc catactctac tcatcctaaa ctagctaaaa gagttcttga
    19921 tctagcaaga caaaataatc ttttagtatc aacccatttt ttagaaagtg aacatgaaaa
    19981 aagatggctt gaaaatggcg acggagagtt taaaatatgg cttggaaatt ttagtaaaga
    20041 cgtgaagcct ttttatactc caaagagttt tttaaactat tttgatggca ttcgtactct
    20101 atttactcac tgcgtttttg cagacgagta tttcgagtat tttgataaaa atctccactg
    20161 cataactact tgtcctgttt caaacagatt gttgtcaaat aagttaaatt taaaaaaagt
    20221 ttttgatagt aacataagtc taaatatcgc aaccgacgga cttagctcaa atataagttt
    20281 aaatttcttt gatgagctta gagcggcgct ttttactcat agtgattttg atcttttgga
    20341 gctgtcaaag atacttttat ttagctcgac aaatgcggtt gctaagagtt tgggtttgga
    20401 gcttggtgtt ataaaaagcg gtaaaatcgc tgatatatct attatcaaag gtataagtgt
    20461 gaattctaaa gaacagcttg ttttggagat tttgcttcat actaaatttg taaaaaaact
    20521 atatataaag ggaaatgaat gtctgtttta aaatttatat tttcaaaaat cggagctatt
    20581 tttaaatttg ttaatgaata ttttaagagt tttgtatttt tattaattgt tattttgatt
    20641 attgtaaata gtggaaaaag cgagatcgca aatttaaccg agataagctt aaaaggtgct
    20701 ataatcgatg aaagcgagat acttagtcaa atttatgaag ctaaaaacga tagttttatc
    20761 aaaggtgttt tgttaaatat agatagtcca ggaggctcaa tggctcctag cgtacagata
    20821 agcgacgcta taaaagattt ggcgagtata aaaccagtta ttgcatatgc tagtggtaca
    20881 atggcaagcg gaagctacta ttcgtctatt tgggcaaata aaatatatgc aaatcgcggt
    20941 agttttatag gttcgatcgg agttatcgta caatcaccaa atgttgaaga acttgctaaa
    21001 aaattaggcg taagcactca aactataaaa gccggaaaat ataaagaagc aggaacattt
    21061 ataagaggct ggaatgaaga tgaaaaaaac gagcttcaat ctttagtaaa tagaagttac
    21121 gagatgttct atacggatgt agctatggct agaaatcttg atattgataa aaaagatatt
    21181 tgggcaaatg ccagagtatt tttagctccc gatgctaaaa gcgtcgggct aattgatgac
    21241 gtaaaaagct attttgaggt taaaagtgaa ctagaactat taagcggtgt tgctagtcca
    21301 agctggaaac aacagcctat tatggataaa tttatctcaa atttagcaaa agagagtaca
    21361 aacttagctt taaaaatgtt atttgtcaac gaggctagat agatgacact tcattcttta
    21421 tataccggaa agataaaaac gattaccgga gccggaactt attttgaaac cggtatgtta
    21481 aaagagcctg tttgcgaaga gatatattgt gataaattag ggtttaaggg tgatgagata
    21541 aaagatacaa agcatcacgg cggtttagaa aaagcggttt ttgcaaatag tttgcaaaac
    21601 tacgtgatat ggtctaaata cttagaaaaa gatatgcaaa aaggttttat gggtgaaaat
    21661 ctttgtatag acggtatgca cgaaagcaat gtttgtatag gcgatataca taaaatagga
    21721 actcttgttt tgcaagtttc tcagccaaga aagccatgtt ttaaactctc aggagtttgg
    21781 gataataaaa gttttacgaa atatatattt gaaaccggtc ttactgggtg gtactaccgc
    21841 gttttagaaa cgggaagttg taaagccgga gatgaggtca taatagtgca aacagataaa
    21901 gcaaagatga gcgtttttga attaaatatg ctattttatt ctccaaaaga taacctaaac
    21961 ttagtatcta aatttgaaaa agtaactacc ataaccagcg gttgggatat agctataaag
    22021 cagagattaa aaggaattta tgatagctca tatatgagcg gaatttaacc aattatctgg
    22081 ttaaattcaa aaatactaaa atcttcttcc tatagagaat tcgaaactac ttgtgtcatc
    22141 tcctggtttg tcattgagag gtcgagtgta aaatatttga agcggaccta taggtgttag
    22201 ccattctata ccaacacctg tgctataacg cttgatctca tttaaactat catcgcctat
    22261 cataccgtaa tcaaaaaata caagtccacg cattttaaga cgatctataa taggaaagct
    22321 tacttcgact gagttactaa acgatatttt accgccggtt tctatatctt tacaagcatt
    22381 tatgacgctg ccatcgcttc tttttggatt gcatatatgt ttttttggag ttacgcttct
    22441 atttttatat cctcttacgc ttcgtatgcc gcctaaaaat aatttttcgt ttataggtag
    22501 tttagcttcg tcgctattcc ataagtatcc aaatgccgct ttatatctta agataagatc
    22561 ataatctata tagtcgctta atccaagata gtaattaaaa ctagttttat ttttaacaaa
    22621 ctctatatct ccgcctgctc ctgcgtattc aaagctagta gatgctatta taccgcttct
    22681 tgggatataa taatcatccg tgttattaaa tgttatacca ggaattatcg agctttttat
    22741 atttgttccg tttagatatc cggcgtctct ataaaactca tcaagtccag tgattttgct
    22801 gtgttctatc tgatatgtta aaaatgcgtt tgtatatctt cctatttttc tgccgcccgt
    22861 taaactaaag ccgtaatttt tctcattata ctcgttccag tcataatcgt ttgcataaat
    22921 atttccgcca aggctatatg cagagtccat aacgcgaggg tttgtaagtc ctatatttcc
    22981 gcttaaagta tcatcgcttt tatctacgct cacgctacct ttatatccgc taccaaatac
    23041 gtttgtatcg cttatcccgg catttaataa taaaccatcg ctagtaccgt atcctatacc
    23101 gcccgtgacg cttcctgttg atgtctcttt aactacaact tctagatcga cttgttcttt
    23161 atttactcta ttttctttta tttctacatc ttcaaaataa ctacttcttt taagtgcatt
    23221 ttttgagtcg attagatccg ttttattata taaatttcct tctgttaagt acaattcgcg
    23281 tctgacaacc ctatcgactg ttctatcatt tccagatatg ataacgtttc ttatatatac
    23341 tttatcgttt ggtactactt gatatgtaat atctactgtg tgatcaatct catttttttg
    23401 tgtttgagga tagactttta cataagcgta tcctttatct gcgactatat tttcaagatc
    23461 acttatatct tttctgagcc acgctgagtt tagtctgtct ccttttgata gtttaaattt
    23521 tttaataatg ttttcattat caagttcaag ttcgctagga gcgtctatag ttatatcatt
    23581 tacgttataa ggtttgccct cttctatgta ataagtaaga tctgccgtat agttatcaaa
    23641 atatgtattt agatacgcat ctgaaatcga agcgtctaaa taaccttttt taagatactc
    23701 ttcttttatt tttccagagt ctgtagggag atcgtaaatt ttaacttttc catcatttct
    23761 tccccacatc cagcccatga attcacgttg tttatttgat accgcgggtt caacatctga
    23821 gtaatcaagt acttttgagc ctactaaatt tacattttgt attataatgt tttcgcctct
    23881 atttacggtc attattatat gaagtgagct atcattgcca ttcaatggga tcttttcaac
    23941 atcgacgact gtatcaaaat atccttttgt ttcgtaaaac tgtcttattc tatcttttgc
    24001 gttatttata cttagttcgt catacatctg accttttttt acactaagta tgctatctat
    24061 agctttttta tcatttgtaa caacgccttg tatatcaagc ctcgcaatga taggtttttc
    24121 ttttaaggtt actactacat ttccatcggt ttcttctata taaatatctt tgaaataacc
    24181 ttgtttgtat aaatttaaaa tagctttatt tgagtttttt tctgttagct catctcctat
    24241 ttttagtcct gaaatatcgt ttgcaacttc atttgagaga tgcataagcc ctttgtaggt
    24301 cactgatttt atagttacag catttaatgc tccagccacc gctaaactca aaaataatat
    24361 ttttttcata taatgttacc taatgcaaag tgtgattggc tatagtatca taattatttt
    24421 taacatatta ttaaatttaa acacgttacg ttttctaaat ttatcggtca aatttaatgg
    24481 aaattgctag aactttgatt aaatttaaag tataataatc cacaaaaaat aaggaattta
    24541 tatgaacgta ggcataatag gtctaggact tatcggaggt tctttaggtc ttgctttaag
    24601 agatatgaaa cttataacaa aagtaagcgg atatgatctt aataaagaaa acgagagtga
    24661 cgctttgaag ctcggtttag tcgatgagat aataggcttt gaagagatga aaaagagatg
    24721 cgatatgata tttttggcta ttcctgtgga ggccattatc aaaatacttc aaaatttaaa
    24781 agatatacca aaaagtacga ctataataga tcttggttca accaaagtag agatattaaa
    24841 atcatgtccg gatgagataa aagagaactt tgtggctgct catcctatgg caggaactga
    24901 aaactcagga cctaaagcgg catttaaaac tcttttaaac ggtgccgtag ttgtcgtatg
    24961 cgatgataaa aatgcaggtg aaaatcacgt aaaaagagca gttgagatac tatctcacgc
    25021 aggtatgaag atagttttta tggattcaaa aagccatgac catcatgtag gaattatatc
    25081 tcatcttcct catatcatca gttacagtct tgtaagctca actttaaaag aagaggataa
    25141 aagaaatata ttgcttcttg ctggaggtag ttttagcgga atggctcgta tagcaaagtc
    25201 aagtccgcaa atgtggtcag atatatttaa gcaaaataaa tccaacgtgt taaacgcgat
    25261 aaattctttt aaaaaagagc ttgaaatttg tgagaatatg atagaaaacg atcagtggga
    25321 tgaactaaaa gcgtggatgc aaactgctag aggattgaga gatattttat agttaaattc
    25381 aaaatatttt gatataatca cgatctaaaa aatatattaa taaggtagca taatgagaaa
    25441 aaattcaggt tttaaaatta ttattatagg tattattata attttgtcta tatttatagt
    25501 ggtaagtatt tcaaatttaa atatacttga gaaagaacct cctaacatag ctttggaaaa
    25561 tgaaactcat tggaatttaa aagctcctat tcctcttaaa atcacagata atgcaggtat
    25621 taaatttata aaaatagttt tgaacgacgg ttctgcgagt caagttctgt tatctaaaga
    25681 gtttaatgat agccaaacag aagtaaattt aaacatagct tttcctaaaa atgctatatt
    25741 tgatgagaaa aaaacttata ctttaatagt ggaagcgata gatactagca aatggaattt
    25801 ttttggcgga aataaatccg tgaaaaattc aaaactttta gtagatacaa aaagaccaga
    25861 gatatatata ctaaaccagt cttataagat atcaaaaggc ggcgcggcag ctgtagtatt
    25921 tagggctagt gatgataata taaaagatgt atatatacag actaactacg gtaaaaaatt
    25981 taaagtcaca ccgttttaca aagacggtta ttattcatct ttagtagcgt ggcctagttc
    26041 tgaaaatgag tttagcgcag atgtagtggc tgaagatatg gccggaaata aaagcaatat
    26101 gcgcataaga tactttttgc aagacagaaa gtataaaatc tcaaaaatag ctttgaacga
    26161 tagattttta gatggtaaaa tactagatct tgcaaatcaa tatgcaacag atcctaatgc
    26221 tatggataag cttgctagat ttaaattcgt aaatgaaacg cttagaattt caaatgagaa
    26281 aaaaatagcg gaaatcacgt caaaagtgcc tgaaaaatca atgaatggct tttatataga
    26341 tcctttttat cctcttagaa acggagcggc ggtagctagt ttcggagatc atcgttttta
    26401 tacttatggt ggaaatgacg taagcgaaag ttggcattta ggtcttgact tagctagcac
    26461 agcaggagcc aaaatagcaa ctagcaatcc ttcggtagta gtatttaacg aagaaaacgg
    26521 catatacggt caaaatataa ttttatacca cggatttggg ctttatactt tgtatggtca
    26581 ctgtaatagc acaaatgtaa atgttggaga gcaactaagc gtagatgctt ttataggaac
    26641 taccggaact accggacttg ctcttggaga tcacttgcat tttggagttt tagttcaagg
    26701 tatagaagtt agacctgagg aatggatgga taataaatgg atgaaagata acgtatacga
    26761 tgttctcgag ctttcaaaaa aggttattga taagaaaatt tgaagtgatt tgatttaaat
    26821 cagtaaattt atagtggtaa atttaataag gagccaaatg aaaaaatacc gcatttatca
    26881 agtcgattca tttactactc aaaagcttta tggtaatccg gctggagtag taacaaacgc
    26941 cgatggactt aacgatgagc agatgcagcg catagcaaga gagctaaata actcagaaac
    27001 ggcgtttatc ttatctccta aagacgcgag tcatgatgtt tgggtacgct tttttactcc
    27061 gacaagtgaa gttcctatat gcggtcacgc tactatagcc gctcattacg ctagagctat
    27121 agagctcgga ctagattcta ctaaagtagt gcaaaaaaca ggcgccggaa atcttcttgt
    27181 agatataaac agatgcggca atgattattc tatagtgatg actcaaggcg agatcaaaat
    27241 cggcgaacca ttttcttggc agatcgtaca aaagcttacc gaagcgcttg gtatcaagag
    27301 cgatgattta aactcaaaat gtccggtttg catcgcatct accggacatt caaaagtaac
    27361 gatagctatc aacttaaact ctgttttaca ctctttaaaa ccgaatttcg aacttttaat
    27421 atcacttagt aaagagatag gttgtaacgg gtattatgtt tttacgctag atcaaaatgc
    27481 tgaaattcta gtgcacggac gtatgtttgc tcctgctata ggtataaatg aagatccggt
    27541 aactggaaat gcaaacggac ctttaggggc gtaccttgtg cattatgaac tttttggcaa
    27601 cagtgatttg cgaagtttta aattcaaagc aatgcaaggc gaagcgatag gacgcacagg
    27661 cgtgatggaa gtaaatgtaa ctaaagaagg cacgagaccg actcttgtac agataacaga
    27721 aagagcggta attgttttta gcgctgagct tgaggtttaa gttttgagcc gatatttacc
    27781 aatttttaac cgatttttga tataatcggt ctagattact taaggattaa atttgaaaca
    27841 aacaacaata tcaaaaaagg ttgagggcgt aggtatagga cttcacaagg gtgagcctat
    27901 aaaactaata cttgaaccat tagaagcaaa tatgggtata gttttttata gaagtgattt
    27961 gggaagtagt tttaaagccg agccaaaaaa tgttataaat acgcaaatgg ctaccgtagt
    28021 aggaaatgaa aaaggttccg tatctacaat agaacatctt ttaagtgcta taaatagtta
    28081 cggaattgat aatataagaa tagttctaga cgcaaacgaa gttcctgtga tggacggaag
    28141 tgcgataagt ttttgtatga tgctagatga agccggagtc atcgaactag aagccgataa
    28201 aaaggtaata gtagtaaaaa aagaagttga agtgagggat ggggataaat atgtaaaagt
    28261 cactcctagt aaaaatccta aatttaacta tactatcaaa tttgaaaatc ctattatcgg
    28321 taagcagagt tatacttttg aatttagtaa agaaaatttt ttaaatgaga tagcgcgcgc
    28381 tagaacattt ggatttttaa aagatgttca aaaactaaat tcaatgggct tagcacttgg
    28441 cggaagtctg gataatgcag tagttatcga cgatagccgt attttaaatc cagaaggatt
    28501 gcggtttgaa aatgagtttg taagacataa aatactagat gctatcggtg atataagctt
    28561 acttggagcg cctatggtcg gagattatga ggcttacgca ggaagtcatg acttaaatca
    28621 caagctcact gtagctcttt taagcgacga aaagaactat gaaatggtaa cattagatga
    28681 gcaaaaagcc aaagagtatg caaaggcttt tgcataaaaa aagttgatat tttagtagca
    28741 gcgctctcat cgccgttgct tattggtata tatgaaaacg atactcttat aaaagagctt
    28801 tgtagcgatc aaaaagctag tgaatcttta atagcatttt tagatgaaat cagttcagag
    28861 tttgtaatat cgagcataac ttacgcaaat actcctggaa gctttatggg tcttaaggta
    28921 agttatgtga tattaaaaac attttgtata gccaaaaata tcggtttttg ggctgttagc
    28981 ggatttgaac taaatgactt tggcgctata cgcgcaaata aaaatttaag ttttgtatat
    29041 agcaaagatg gtattagttt gcaaaaaata gaacaaacag attttaaact cccaaataat
    29101 ttatcaaatt taaataaaaa gtgtgatact cttccggagt atattataga tgcaatttag
    29161 gagagaattt gaaaatacta acgccagcca caagtgcgaa tttaggaccg ggatttgatt
    29221 cattaggact ttcgcttaaa ctatacaatg aagttactat aacaaagcaa aattttacgt
    29281 cagtttgcat aagcggcgaa ggaagcgata aaatagggct aaaaaaaaat aatacatttg
    29341 taaatatttt caacgaaacc atgctttatc ttaccggcaa gacgccgaat tttagattta
    29401 attttataaa taatattccg ttttctagag gtcttggaag tagctcatcg gtaatagtag
    29461 gagctatagc ttctgcttat catatggctg gatttaaagt agatagagct ttggtattaa
    29521 atcaagcttt aaaatacgaa agtcatccgg ataatatctc tccggcggta tggggaggtt
    29581 ttacgtcaaa tatcgtgcat aaaggcacag tatatacgca aaaagctgat attagtagcg
    29641 atttaagagc cgttgtagtt ataccagaca agcctactag cacaaaacaa tcaagaggaa
    29701 aactaccaaa aacataccct atggccgatg taatcagcaa tgtctctcac gcggcttttc
    29761 ttactgcttg ttttataaaa caagattatg agaatttaag attagcaagt atagataaaa
    29821 tgcacgaaat cagacgtatg catggactta aagagctttt tagggtaaga gagatagctt
    29881 atttaagcgg tgctttgatg agcaatcttt ctggtagcgg atctagtttt ttaaatttag
    29941 cacataaaga tagagctcaa actttaagag atatattgca attagaattc ccggagttta
    30001 aagtagaaat ctacgaactt gataataacg gttttatatt gcaaagctaa aaataaagaa
    30061 aattaagata taatatgaac aaatttcata aaccaataag aatgtgcgtg gtttgcaaag
    30121 gcagattttt tcaaaatgag ctttttaaat ttgcttgtgt aaatggtgaa atacaaataa
    30181 actcaaaaaa tacaaggtca ttttatctat gcaaaacctg tatccaaaaa gacaaaaaag
    30241 acctcaaaaa accactctca cggtttagta aaaatagtgt aaacttaaag gagatactcg
    30301 ccgatggcaa acattagaat ccatgaaata gcaaaagaac ttggctattc caataaagaa
    30361 attttagaaa aagcaaagga gttaggattt aaggttacaa cttcatctag cgcagtaact
    30421 ccagaagatg cagcacaact ctatgattat gtccaatcag gtaaaaaacc agaatcgccg
    30481 gagaaaaaag atataaaaca aaatactcaa aaagaagctc cagagacaca aacgcagcaa
    30541 aaacctatag agcaagaggt ggaaaccaaa caaaatattg atagtacgcc aatcaaagta
    30601 gagccaaaac aagagagttt ggccagttct actttatcta aaaggcgagg cttagttata
    30661 gtaaaaaaga aaaaagtgga agttcaacct atacaaaaac agcagtctga acctataaat
    30721 aaaggtttag aggcgatttt tggcagcagt gatgaaaatc taaaaaagaa gaaaaaagag
    30781 aaaaaaccta ttatagctac taaaaaagag aactcggcta agatagactt gttatccgca
    30841 attagtttta gcgatgatat atctatagat gatgaagatg ttgttgtatt gccagatctt
    30901 actgtaaaac ctatagagat tgaacgtcaa aatacggtta aaaagcagat aaatgtttat
    30961 aaaacatctc aaaataatag ttttagtttt gagggcggaa tacaaagaaa cagtagaaaa
    31021 aaacataaaa aagtcgtaaa agacaaagat aatgaagata taagtagcgt tgatatccca
    31081 aaagagattc gtctttatga atttgccgat aagataaaaa aatcttcaag cgaagtgata
    31141 gcaaagctat ttatactagg aaaaatgact actaaaaatg attttttgga agaagatgag
    31201 atagaaatac taggcgccga gtttggtata gaagtcaata tagtggatac taaagaagat
    31261 tttgactatg taaaagcata tgaagatgaa attttagaag ataatagcgt atcaagagct
    31321 ccggttgtta ctataatggg tcacgtagat cacggtaaaa ctagtttgct tgattatata
    31381 agaaactcgc gcgtagctag cggtgaggcc ggtggtatca ctcaacacgt cggcgcttat
    31441 atggtagaaa aaagcggtaa aaatataacc tttatagata ctcctgggca tgaagctttt
    31501 accgctatga gagcaagagg agctagtgtt actgatatag ttattatagt tgtagctgcc
    31561 gatgatggtg taaaacctca aactaaagaa gctataaatc atgcaaaagc cgcaggagtg
    31621 cctatcatta tagctataaa taaaatggat aaagaaagcg ctaatccaga tcttgtaaaa
    31681 acaggacttg ccgagcttga tattcttcct accgaatggg gcggcggcta tgagtttgtg
    31741 cctatttcgg ctaagaccgg aattgggatc gaagatttac tagaaatagt tctacttcaa
    31801 gccgaacttt tggaacttaa agcaaatccc gatagagaag caaaagcgac tattatagaa
    31861 agttcacttc aaaaaggtcg cggaccagta gcaactgcta tagttgagaa cgggacgcta
    31921 agagtaggag atactatcgt tgctggtgtg gcttatggca aagtaagagc gttgcaagat
    31981 gacaagggaa atagtttaaa atctataaaa cctggtgaat gcggtgtcat cataggactt
    32041 agcgaagttc cagatgcggg agaaacgttg ataagcgtaa aaacagataa agaagctcgt
    32101 gaatatgctc agaaaaaata tgattattta agacaaaaag agcttagtaa atccacaaaa
    32161 gtaactatag atgagctaag cgctaagata gcagaaggcg agttaaaaag ccttccagtt
    32221 atcataaaag ccgatgttca aggctcacta gaagccataa aagcaagcct tgaaaaatta
    32281 aaaaatgatg agataaaagt agatataatt cactctggag taggcggaat cagccaaagc
    32341 gacataactt tagcaagtgc aagttcaaac tgtgttattt taggctttaa tataagacca
    32401 actggagacg taaaagaaaa agctaaagag cgttctgttg agataaaaac ttacaatgtt
    32461 atatataatt taattgatga tgtaaaagct ctgcttagtg gtcttatgag tcctattata
    32521 agcgaagaag agcttggtca agccgtcatt cgtcaagtta ttaatgtgcc aaaaatagga
    32581 caaatcgcag gttgtatggt gactgatgga agtataaata gaggtgctaa gatacgtgta
    32641 atccgtgacg gagttgttgt gtttgaagga aatgtaagct cattaaaacg ttttaaagat
    32701 gatgtaaaag aagtagcaaa agggtatgag tgcggagtcg gtatcgaagg atataacgat
    32761 atgagagaag gcgactatat agaaagttac aaagaagtag aaagcaaggt tgagttatga
    32821 atgcagccga agtaaagcgc ctaagaacag aaagcgtgct aaaagagctt attccagaag
    32881 cactaagcag cttagatgat atctatttaa aagggctttg cgtaactgat gtagagtgta
    32941 aaaaaggcag atatgatgct tttgtatatc ttgataaaat gatgcttgac gacaaagagc
    33001 aatcttacgt tttagagcat ttaaaaagag taagtaagca tatacaaaat cactgtatga
    33061 gtgccgaagg ttggtataaa gctccaaatt ttcatttcaa atttgatgat aggctagagt
    33121 atcaaaatca tattgataag ctatttagta aggtttctga tgagcttgat aagggtaaaa
    33181 aatgacggat ttatcaaatt tagtatcgca atgcggagtt gatctgtatg atgcagaagt
    33241 cgtaaatgaa aatggtagag ttatatatag agtttatata acgaaaaacg gtggtgtaag
    33301 tttagaagag tgcgaagcag ttagtaagct tctttctcct atttacgatg taatgccgcc
    33361 agtaagcgga gagtggattt tagaggtttc aagccctggg cttgagagaa aacttagtaa
    33421 aatagaacat tttacgctta gtataggcga atttgctaaa attatactaa atgataagac
    33481 cgagattaaa ggtaagatag tatccgtaaa agatgataat atatgtataa atatcaaaaa
    33541 taatgaatca attgaagtca aatttgaaaa tataaagaag gctaaaacct atatggagtg
    33601 gtagtttacc actcaacttt ttgccatgaa tttttctctg cataaagagt gtttatatcg
    33661 taaaaaaagc agtttgggtg gtaaaccttt tccataattt cattttctat atttttttcg
    33721 tttattttca tgtattttat tactttatag atgattccgc tattccttac tatgtatggt
    33781 aaagtgctaa atttgtcttg aatcataaag tatctttttt ctccacagat actttcgcaa
    33841 tatattatgt actccataat tttgcacctt ttttctagtc tc
//
LOCUS       DAPPKW010000008        32552 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.008, whole genome shotgun sequence.
ACCESSION   DAPPKW010000008 DAPPKW010000000
VERSION     DAPPKW010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 32552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32552
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.008"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..181
                     /locus_tag="RPW04_000368"
     CDS             <1..181
                     /locus_tag="RPW04_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDX6294488.1"
                     /translation="MAGILKIDVKTLYNWKKNKPELYRIVMLGFKFDELLWLSKQNFE
                     EMQKLARENQNYRLR"
     gene            238..1248
                     /gene="ribD"
                     /locus_tag="RPW04_000369"
     CDS             238..1248
                     /gene="ribD"
                     /locus_tag="RPW04_000369"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDX6294489.1"
                     /translation="MCNEYYMNIAINKAWEFQFLTYPNPAVGCVITGKNGEILSINAH
                     EKAGMPHAELNAIKYALEMKNPAFKQDFDEIKDTNELYNFIMQNHSNLLNGSTAYVTL
                     EPCSHQGRTPPCANLLKELGFKQVIIGAIDSSENAKGGEQILKNSGIKTKIGVCKEKA
                     DELLEPFLAWSLGNFSFFKIALTQNGIASGGVISNLQSRTHSHKLRSLVDMLVIGGNT
                     VRTDRPLLDTRLVKNGKNPDILLYSKESKFDTTIPLFNILDRRVIVSNSLDAVFERKF
                     VMFEGGENALLNLDKRVKWLLIYRSNEFKIGKAISLNLKIKIMHTSKFENDELLWCKI
                     LD"
     gene            1387..5784
                     /gene="gltB"
                     /locus_tag="RPW04_000370"
     CDS             1387..5784
                     /gene="gltB"
                     /locus_tag="RPW04_000370"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HDX6294490.1"
                     /translation="MDRLYSYKDNCGFGLLANLHNVSSYQNTIDAITALERMMHRGAI
                     ASDGKSGDGCGLLFSMPTSFMKKAAKECGVLLPEQFGVAMVFLKTDEHMEKFEEICLK
                     NDLKVILKRDVPIDESALGELALETLPRIVQFFITPNSIIAKKYFSSLLYLARREIQK
                     YFKEDDDFYVCSCSDKVIVYKGLIMPTYIKTFFKDLSDQEFCSSFALFHQRFSTNTLP
                     KWRLAQPFRTIAHNGEINSISANRTNLTIQEKCLKSHKFTNDELNMMIPITGDDRSDS
                     ASLDNMFEFLIQNDVDFFKAVRLVLPAPWQNSPYTDSKIRSFYEYTSPNFAPWDGPAA
                     VSFTNGRFIACCLDRNGLRPAKYIITKDSRVLISSEYGVLDIDESNILERGRLQSGQM
                     IGLDLKYGKVMKNDEINDYIKNSQDYTKWLNDNMVHLEEFVEIVFEKLSDYKLDNLHA
                     LQRNFSITNEFKEMILSPMITSGKEATGSMGDDTSLAAFSDSQRRFSDFFKQKFAQVT
                     NPPIDPLREMVVMSLNVTFGEFRNFLEESEFHAKRIKTTSPILMQDKFEVLKSFGDEN
                     SPKFQSEFKNQTFSTLFSENLKGSLEDLVYDVINAIKNGVHIVLLDDRGVDSSNASMP
                     MAMAVGRVHQALIEEGLRHNVTIIAVSGEILDSHSCAMMIGYGASAVYPYLLFASAYE
                     ILKDKDETQIKSGLKNIHHALNTGLLKIMSKMGISTVGSYKNSALFDVLGLSQTVVNE
                     CFAASSVLIPGLEYDDIEKRILKYHKSAFNFGDHLIPLNLGGFYKYLDRDEFHDYTPF
                     IINQIHKTSITGDMNDFSKIRDAIKGRGLRMVRDFLDIKSDKEPISVDEVEPASSILK
                     RFNSAAMSLGSISPEAHEALALAMNKLGAMSNSGEGGEANQRLKSPANSQIKQIASGR
                     FGVTPEYLASATEIQIKLAQGAKPGEGGQLPGYKVTELIATLRYTTPGVTLISPPPHH
                     DIYSIEDLAQLIFDLKQVNPKATIAVKLVSSAGVGTIAAGVAKCYADKIIISGGDGGT
                     GAAGWSSIKFTGNPWELGLIEAHNALKVNNLRSSVHLQTDGGLKIGQDIIKAALLGAE
                     SYAFGTLALVILGCKVLKICHLNRCTEGVATQDPALRGKFSGSVDRVVNYFTLLAEDV
                     RLELAKMGYKSLDDIIGRNELLSPVESKFDMSELLRVIDGDNKSSGKPNNPFDKNEFE
                     KSVLKEVYKTIQNPDEKIVVDKQICNQNRSFGALISGEIAKYYGNEGFVSQTIRINLN
                     GIAGQSLGAFLASGVALYLKGSANDYVGKGMNGGRIVISPNDPNNYFAVAGNTCLYGA
                     TGGKLFASGIVGERFCVRNSGATAVVEGVGDHACEYMTGGVVAILGNTGINFGAGMTG
                     GIAFVWDEKREFIDKLNQELVIALRIDTDEMDEARHFLKRLIRAYYNETKSVRAKYIL
                     DNFRDSIREFWMVKPKDMTKLPLNPADGD"
     gene            5786..7144
                     /locus_tag="RPW04_000371"
     CDS             5786..7144
                     /locus_tag="RPW04_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HDX6294491.1"
                     /translation="MQEFTNLTRLKTIKRDEGERSTDFKEIYQIFSLQSAKEQSSRCV
                     QCANPFCHNACPLHNYIPFWLLNTANLNLEMAFKLSNETNPFPEITGRVCPQDRLCEG
                     ACTLNDNFGAITIGSIETFITESGLNSGFNPFGDIVFTDKKVAIIGSGPAGLSVATYL
                     IRNGVRVEIYEANHRAGGLLAYGIPGFKIEKSVIERRINILKTAGCVIHTNSFVDDFK
                     FESLMSEFDAVVLAYGARTGRAVGLANEKAKGVYNALDFLTILQKEQYKESDASIDLN
                     GKKVVVIGGGDTAMDCLRSAIRKGALSATCVYRRDLASMPGSKKEFVNATEEGANFIF
                     NAAPKDIVVNDENKVIALNISKTLTKDGKVELLKGGETIINADIIILALGFDVENLSF
                     LSANGIEFDKKGRVATDKEFRTSKSGVYACGDCNRGSDLVVTAAADAKHCAKTILKDL
                     GL"
     gene            7246..7773
                     /locus_tag="RPW04_000372"
     CDS             7246..7773
                     /locus_tag="RPW04_000372"
                     /inference="COORDINATES: protein motif:HMM:TIGR00730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HDX6294492.1"
                     /translation="MEFVTIFGSARLDSGSKFYKIAFELGKKLSQAGYGVVTGGGGGI
                     MEAANKGAFLSGGVSVGINIILPFEQKLNPYCTESKTIDNLSKRKDMLIEKSSAFILM
                     PGGFGTLDEIFEVITLAQTGLRKHKIVFCCKEFWQPLLDFFDNALAAEKLIADDHSVY
                     AVIDDFDEIIRYLKD"
     gene            7830..8342
                     /locus_tag="RPW04_000373"
     CDS             7830..8342
                     /locus_tag="RPW04_000373"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294493.1"
                     /translation="MNMLFRFLGSDNIAFRELFFTDAKIDIEVIRDDESGFVAQKAIY
                     DCNKKNSDTSGNYVENCELVFVPVYTQKVRVKIQGCIEQSFNFEVMLPFDSTHFKILA
                     KYSSEYRAIEPTSQDNDEGYYISLFEIIQNLMKSSRLIINYWSGEFEGSEISGQKLHI
                     MTDSNNIYLN"
     gene            complement(8403..9356)
                     /locus_tag="RPW04_000374"
     CDS             complement(8403..9356)
                     /locus_tag="RPW04_000374"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HDX6294494.1"
                     /translation="MRKFLLLFACSLPLMSKDIINQLEGTNQQMSAIWGDDRIANITR
                     YDSGFGSLWTYLQGNEYFSYGVAIAMLSVIFAFLAHYMVVGPKHFDHHGGKIYAFSKY
                     VRVIHLIAALSWIVLVPTGIIMMWGDSFGGGFFVRLVKNLHGLATILFAISIVPMLLM
                     WGKRMLPSIYDIKWMMIVGGYLSKEKHPVPAGKFNAGQKSWFWVAVGGGFVMILTGAA
                     MYFLDFNTPILTSTFGLTQIEILRLSAIIHNVLGIVCAVFLLVHIYMAAFAIKGAIHS
                     IITGYKEEEEVYILHHYWYQELVNKGLIKPSKFEAYHSNLK"
     gene            9629..10645
                     /gene="mnmA"
                     /locus_tag="RPW04_000375"
     CDS             9629..10645
                     /gene="mnmA"
                     /locus_tag="RPW04_000375"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDX6294495.1"
                     /translation="MKVLVALSGGVDSSMSAKYLLEAGYSVVGCYMKLHSKPGYHEEN
                     IRKVKKVGEFLGIETHILDLEEEFNAKVYEPFVNAYKEGLTPNPCAHCNKNIKFGALW
                     KFAQTLGCDKMATGHYARIEDGLIKVASDLSKDQSYFLANISPEILPYIIFPLGDKFK
                     VDIKAAAAQIPQIAELASQKESSEICFVETTYIDILNKHFNTLMPGVVRDVSGKVVGK
                     HDGYMRYTIGKRKGFSVDGAHSPHYVLKIDAAKNEIVVGLKDELSSFSFTTTNFNNFT
                     DKNELECFVKIRYRSTPIPCLVSKLDDGATVKLKDNAGGVASGQLAVFYDEFDRVLAS
                     GFIR"
     gene            complement(10786..11118)
                     /locus_tag="RPW04_000376"
     CDS             complement(10786..11118)
                     /locus_tag="RPW04_000376"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294496.1"
                     /translation="MQDDSAAINFWNMVRKWEGDKTQIGDDEAIVGKDDYKYNKEFWS
                     NEEYIWGQCLIPNADNSNGLISFKQQPLSNIYNQYVSFCTAFFAHPTIKEWIQNGVTV
                     GNSRVFRK"
     gene            complement(11094..11324)
                     /locus_tag="RPW04_000377"
     CDS             complement(11094..11324)
                     /locus_tag="RPW04_000377"
                     /inference="COORDINATES: protein motif:HMM:NF019575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HDX6294497.1"
                     /translation="MKKAFTIIEIVMVMIILGVLASLAIPKLVATKVDAKVAKAVINM
                     KMHINKVSAYYTINGKFATSNSGGGCKTIALL"
     gene            complement(11347..11823)
                     /locus_tag="RPW04_000378"
     CDS             complement(11347..11823)
                     /locus_tag="RPW04_000378"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294498.1"
                     /translation="MTRIIEIFILIAAVIIFVFVFLPRVTGENNRAAITKTVFEIKQV
                     LNEITMYHIRNGSFPNTKDANQTNLVLKNISTTYAQVTQRSSERWDKCIYIKPLNSQN
                     DKPARIYIAKTDTQNEFCQNVQNSQMLQEWLKLSDDDNKTDGTYKNEIPLIDGKVF"
     gene            complement(12070..13350)
                     /locus_tag="RPW04_000379"
     CDS             complement(12070..13350)
                     /locus_tag="RPW04_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HDX6294499.1"
                     /translation="MTTLIKNGTIINQNGTLKANILIDGEMIKSITAEEPKADLVIDA
                     TNKLVMPGLIDMHVHFRDPGLEYKDDIITGSMSAVAGGVTTACPMANTNPVNDNAVVT
                     RDMIAKAKKRGLIDLLPIGAITKGMEGKGITEMGDMSEAGCVAFSDDGLPVSSSDVMR
                     AALLYSAFHKSFIINHSQDCSLCRGGHMNEGKMSMLLGIKGMPREQEEIMISRDMLLA
                     KLTGGHIHVAHVSSAYSLKLIEQAKNEGVNITCEVTPHHFTFSEDELINYDTNFKMSP
                     PLRTNNDVEAMRNGLKNGLIDVICTDHAPHHTDEKFLEFDKAPFGILGLQTLVPLTLN
                     LVREGVIDYEQMVKLTSFNPAKILNLKNKGAIKEGFLADIAIIDPDLEYIYDENLNKS
                     KSKNSPLLGKKLKGASVVTIKSGKVVFDFPNVVG"
     gene            complement(13354..14286)
                     /locus_tag="RPW04_000380"
     CDS             complement(13354..14286)
                     /locus_tag="RPW04_000380"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HDX6294500.1"
                     /translation="MSYVKKDLISTKDLSKDDIFSILSLAKDYKALNLEPVKKDPILK
                     GVTVVNAFFENSTRTRTSFEIAAKRLGADAINFSSSTSSTNKGETLIDTIHNIEAMKT
                     DIFIVRHYSSGAAKFVTKNTPSCVVNAGDGCNEHPTQALLDLLTIYEAKGSFSGLSVT
                     IIGDIFHSRVARSNIYAMQTLGIKVKLFGPPMFMQNAEVFGCHICKDMDEAVMGSDAI
                     IMLRIQLERSDGEVAFPSIREYSKYFGLTKTRMQKAKDDVIILHPGPINRGVEINSDV
                     ADDARFSSILDQVENGVAIRMAVLKTIYQNKFKA"
     gene            14398..15327
                     /locus_tag="RPW04_000381"
     CDS             14398..15327
                     /locus_tag="RPW04_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HDX6294501.1"
                     /translation="MRGYKIFSGTANVEFSKMVAKYLGIPLSEASIKRFSDGEISVQI
                     GESVRGKDVFVIQPTCAPANINLMELLILTDALKRSSASSITAVVPYFGYARQDRKAA
                     PRVPITAKLVANMMQTAGIDRVVTMDLHAGQIQGFFDIPVDNLYGTIVFMDYVKSKNL
                     KNPIVASPDVGGVARARALAKTMNLDMVIVDKRREKANESEVMNVIGDVSGKDVILID
                     DMIDTAGTIVKAAEIFKKKGATSVMAFCTHPVLSGPAYERLVNGSLDELVVTDTIPLK
                     EHPSCIKVLSVAPLFGEVIRRVYHDESVNSLFS"
     gene            15539..17329
                     /gene="lepA"
                     /locus_tag="RPW04_000382"
     CDS             15539..17329
                     /gene="lepA"
                     /locus_tag="RPW04_000382"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDX6294502.1"
                     /translation="MNNIRNFSIIAHIDHGKSTLADRIIGECGAVDSRVMSAQVMDTM
                     DIEKERGITIKAQSVRLTYKLEGQIYILNLIDTPGHVDFSYEVSRSLASCEGALLVVD
                     ASQGVEAQTIANVYIALENNLEIIPVINKIDLPAAEPQRVKNEIEHIIGLDCSEAIEV
                     SAKTGVGIKELIETIIRKIPPPKPGENNPFKSLIYDSWFDNYLGALALVRVYDGAVKK
                     GDEVYVMGTDKKHTVLDLMYPNPIAPIKTNELKTGEVGIIVLGLKNVSDVSVGDTITL
                     AKNRALEAIGGFEKAKPFVFAGLYPIDTDKFEDLRDALDKLKLNDSSISYEPETSAAL
                     GFGFRVGFLGLLHMEVVKERLEREFGLDLIATAPTVTYEVVQTDGVSVEIQNPSELPP
                     VNKIEFIKEPYVKATIITPSEFLGNIITLLNNRRAVQTKMDYITTTRVLLEYDIPMNE
                     IVMDFYDKLKSATKGYASFDYEPSDYRVGDLVKLDIKVAGEAVDALSIIVPEEKAMSK
                     GRDFVKTMKELVPRQLFEVAIQASIGNKVIARETVKSMGKNVTAKCYGGDITRKRKLL
                     EKQKEGKKRMKAIGKVTLPQEAFLSVLKID"
     gene            17360..17575
                     /locus_tag="RPW04_000383"
     CDS             17360..17575
                     /locus_tag="RPW04_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HDX6294503.1"
                     /translation="MPYVNIKVTKENGEPTVAQKEELIKGVTELLHTVLGRNRASTVV
                     IIDEIETENYGLGGESIKIKRKREEKR"
     gene            17572..18243
                     /locus_tag="RPW04_000384"
     CDS             17572..18243
                     /locus_tag="RPW04_000384"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294504.1"
                     /translation="MKGFLFALFAALFFIGCSNKAVLDPYTDTSAAKSYETIMKITLN
                     CEPCADTNYETTINGYTYRSDVAINCCTNLRKIDAGAGLKKVYLHNISDLRENSKVIK
                     ANGKAYSLNKRLDTLFYLAMKEELTNRGILVVDTETSPYTLRVDFGFTDFKGVYSPGA
                     SQLNSRLQGILRIKNINYDKRIQINTRQSVSGLNANDVSDFGLYMDLLVKQAVNKAAE
                     QISKF"
     gene            18253..18801
                     /locus_tag="RPW04_000385"
     CDS             18253..18801
                     /locus_tag="RPW04_000385"
                     /inference="COORDINATES: protein motif:HMM:NF015858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294505.1"
                     /translation="MIKWAFIFSCLILFVGCSNTTSVLTLSPYEAKGVNVRSNSNIII
                     NSILDKRKNQSVVATITDKKGTVSEYITLGNNLTNWFSDALIKELKKNGAVFGGDDAK
                     VVDITITELKANLSGYSKDNMQGTSEIYIKIYKDGVTTTKRIAQPQTEFVPIATGGAF
                     EPFIKTLLDDMIARTAKAILAN"
     gene            18801..19370
                     /locus_tag="RPW04_000386"
     CDS             18801..19370
                     /locus_tag="RPW04_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018712472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HDX6294506.1"
                     /translation="MRCLKCGSFTFKFICKNCKRVLSEFESGCRDIDGFKVYSFYKYD
                     DIKSLIHSKHRMHGHFVFRELAKLSFSKFADTFKFDSNVNVVSIDDQISSGYSHTAVL
                     AHAMKREFLKPIYGALRATNKVKYSGKTLEFRKNNPRNFKLLKEVNNPVILVDDIITT
                     GSSMKEAKNLLLSCGKLPLFGLVLADARE"
     gene            19380..20655
                     /locus_tag="RPW04_000387"
                     /pseudo
     CDS             19380..20655
                     /locus_tag="RPW04_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850437.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4910 domain-containing protein"
     gene            20652..22136
                     /locus_tag="RPW04_000388"
     CDS             20652..22136
                     /locus_tag="RPW04_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid adenylation domain-containing
                     protein"
                     /protein_id="HDX6294507.1"
                     /translation="MIRNVCDFLDISVAKNPFKKAFVFGDESITYAKFDEIADRLASE
                     ILKLNLKNEAVLIILPKCIWTLVSFFAVAKSGNFYTLLDISTPLERIDQVIKILKPKV
                     IITQKDFKFDFVNTVKIFCEDFSKFSVNKSALKESRNAHIDTNLLYVFFTSGSTGVPK
                     GVSISHKSVIDYTFWVCETFELNSRETIANQAPFYFDNSILDIFSCVKSGATLHILPT
                     SIFAFPNKVLSYLEEHSVSLIFWVPSVLTYFANVNALQNFKLEHLKKVLFCGEIMPNK
                     QLNIWRKALPHTLFANLYGPTEITDVCAFYVCDRSFGDDEPLPIGKACQNTELLVFDD
                     ELNLIKEPFIKGELYVRGTSLSLGYFANKQKTKEAFIQNPLHDNYQDILYKTGDIVAF
                     NERGELICYGRRDNQIKFMGHRIELGEIEIAANSHLQVLNSVCIFKQGGIALFYEAKE
                     ELNLKSYLLEKLPNYMVPKRFILVDKFVLNPNGKIDRKVLYELI"
     gene            22123..22860
                     /locus_tag="RPW04_000389"
     CDS             22123..22860
                     /locus_tag="RPW04_000389"
                     /inference="COORDINATES: protein motif:HMM:NF012792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDX6294508.1"
                     /translation="MSLFNEFLNSYNNGFKFSNSALSIDSIKNKLEQNIACLKRSEDN
                     FFLMQNGFITYFINDITSFDMQGTYIKLIRKTPICELENRFLSINKFSVFDKYIGMSL
                     KNSGFSFQSYDEVKKALLDDIDEIYGFFINYFDKEYLFISKTELRNRIQEGQVLLIKQ
                     NNKIIGGLIYFLNLNSAHLDFIAVSKEFRRSGTGRKLMSCFLGLNAGYFKLFVRDTNI
                     KAIELYKNFGFEFNAIKISFYRRKNGI"
     gene            22998..23222
                     /locus_tag="RPW04_000390"
     CDS             22998..23222
                     /locus_tag="RPW04_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDX6294509.1"
                     /translation="MNEIKELFNQIGRDDVNESMEGLLSGGIIDSMDIMALVAAIEKT
                     YKKPLRAEFITNESFESFASLKDMINKAMR"
     gene            23219..23995
                     /locus_tag="RPW04_000391"
     CDS             23219..23995
                     /locus_tag="RPW04_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside N(3)-acetyltransferase"
                     /protein_id="HDX6294510.1"
                     /translation="MKAILEANGKLVYERDFLGALKQIGIKSGNSVCVHTELFTLGKP
                     LLPKDEFLRVLLHCFYEVICKNGTLIMPTFTYSFCKNQIYDKLNSRSTMGVLTEFFRQ
                     QNGVVRTNDPIFSFAISGDNQDAFLNDTKSCFGKNSVYDVLKRMDGKIVLFGTQKLGY
                     TFTHYIEEQAEVSYRYFKEFSGILKNKNINYKSIFYYVRDLTKNSDLSVDKIVNLLQK
                     SGNFLECEFGSSTITAINAKDYFNEVLKVLKINETSLLKQ"
     gene            24110..26698
                     /gene="gyrA"
                     /locus_tag="RPW04_000392"
     CDS             24110..26698
                     /gene="gyrA"
                     /locus_tag="RPW04_000392"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HDX6294511.1"
                     /translation="MEENIFSSNQDIDAIDVEDSIKASYLDYSMSVIIGRALPDARDG
                     LKPVHRRILYAMNDLGVGSRSPYKKSARIVGDVIGKYHPHGDTAVYDALVRMAQNFSM
                     RVPAVDGQGNFGSVDGDGAAAMRYTEARMTVLAEELLRDLDKDTVDFIPNYDDSLSEP
                     DVLPARVPNLLLNGSSGIAVGMATNIPPHSLDELVNGLLTLLDDKEVGLEDIMTHIKG
                     PDFPTGGIIFGKKGIIEAYKTGRGRIKLRAKTHIEKKPNKDVIVVDELPYQVNKAKLH
                     ADIADLVKEKLIDGISEVRDESDRDGIRLVIELKRDAMSEIVLNNLFKSTQMEVTFGV
                     IMLAINNKEPKVFSLLELLKLFLNHRKTVIIRRTIFELQKARARAHILEGLKIALDNI
                     DAVINLIKTSADTNSARDGLMAKFGLSELQSNAILDMRLSKLTGLEREKLEAELKEIL
                     ELIEKLDAILKSETLIENIIRDELLEIKSKFKCPRITDIVDDYDDIDVEDLIPNENMV
                     VTITHRGYIKRVPSKSYEKQKRGGKGKVAVTTYDDDFIESFFTCMSHDTLMFVTDRGQ
                     LYWLKVYKIPEGSRTAKGKAVVNLISLQADEKIKAIIPTTDFDESKSLAFFTKNGIVK
                     RTNLSEFKNIRSIGVKAINLDDNDELVTVVIANSEPDESYDDSFEDGEGVSNLQTISE
                     DNSENSLESGKMLFAVTKKGMCIKFALNKVRQIGRVSRGVTAIRFKENLDEVVGAVVI
                     ENDSQEILSVSQKGIGKRTTADEYRLQSRGGKGVICMKLTPKTKDLVGVVMVDEEMDL
                     MALTSSGKMIRVDMQSIRKAGRNTSGVIVVNVDGDEVVSIARCPKEESDDDDIVADDT
                     QEQDME"
     gene            26740..27225
                     /locus_tag="RPW04_000393"
     CDS             26740..27225
                     /locus_tag="RPW04_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPP20 family lipoprotein"
                     /protein_id="HDX6294512.1"
                     /translation="MKSLIFALLVVGVFVGCAAFTPEPKTQDVVVQKVDKDDLREIIK
                     NDKMLAGMEINPEAIFSAVGEGIPPIDTVSPAQARALAKRSAVADAYRQLASKLYGVK
                     INAKDTVKDAMLRDSVIETRVTGLIKNAAIINQDFKDGLFRVEMELKIDKDKWQELFA
                     Y"
     gene            27201..27590
                     /locus_tag="RPW04_000394"
     CDS             27201..27590
                     /locus_tag="RPW04_000394"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294513.1"
                     /translation="MARAFCLLVISTLLFGGEEFIFWAKYSSSNSLIKYQNISISKAM
                     VLSKEKGSKICDIQSSKFNNETTLNYLKRHQEQLFECFINQKVLLKDSSKFKGNSANL
                     KTSVTLVPVRFIVEFKPLGATISKINR"
     gene            27595..28737
                     /locus_tag="RPW04_000395"
     CDS             27595..28737
                     /locus_tag="RPW04_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HDX6294514.1"
                     /translation="MNVVIVEDDINMRKSLEIALGDYDEFNIKSYKSATEALKKLEDN
                     TDIIVTDINMPGIDGLEFIKELGGKFDVIIMTGNATLNRAIQSVRLGVKDFLTKPFDV
                     ETLVTAIKRTKTLSSKQSIKQDSAAVQEGSFLSTSPNLQKALNIAKRAAITDVSVMIM
                     GESGVGKELFSKFIHENSKRKNEPFMAINMAAIPENLLESELYGYEKGAFTDATATKK
                     GLFELANGGTLFLDEIGEMPLNLQPKLLRAIQEREIVRVGASKPIKIDVRIISATNAN
                     LEKKVKEGEFREDLFYRLNTVPLFVPPLRERKDEILGIANSVLQRVCIGYELGEKSFS
                     DEAMSELLGYDYPGNIRELISIVERAAILSEQTNISKDDLFIYAKR"
     gene            28802..29830
                     /locus_tag="RPW04_000396"
     CDS             28802..29830
                     /locus_tag="RPW04_000396"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009649307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDX6294515.1"
                     /translation="MKKYSVAVVGATGAVGEEIFRVLEEVDFPVGNLLPLASSRSAGN
                     IAEFRGKGYEIVQLTDSVFEENEIDIAFFSAGGSISAHFAPLAAASGAVVIDNTSHFR
                     MDPEVPLVVPECNPEDINLWTNKGIIANPNCSTIQMVQVLKPLDDLFGIERVDVSTYQ
                     ATSGAGKKGMEELILQMQKFFEFKLDECEPSAFKHQIALNVIPHIDVFLDNDYTKEEM
                     KMVNETQKILHKNIEVSATCVRVPVLRSHSESITIKFKTDINVEKALNVLKNAPSIVI
                     QDDPANNLYPMPILASDTNETYVGRIRKDNYRDDILHLWCVADQIRVGAATNAVRIAQ
                     KWCQIQDH"
     gene            29905..30414
                     /locus_tag="RPW04_000397"
     CDS             29905..30414
                     /locus_tag="RPW04_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqhA family protein"
                     /protein_id="HDX6294516.1"
                     /translation="MLEKFFEMMLWKSRYVTILPVIFGLIGSFVMFIVASYDIIKVII
                     YAWQYLILGDHSIDLHSDAVGLIIGAIDLYLMALVFFIFSFGIYELFISEIDSIKNSK
                     QARVLEVHSLDQLKDKIGKVIVMVLVVNFFQRVLHAKFSAPLEMVYLAVSILALCLGL
                     YFLHKSSSH"
     gene            30435..31466
                     /locus_tag="RPW04_000398"
     CDS             30435..31466
                     /locus_tag="RPW04_000398"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDX6294517.1"
                     /translation="MIFIDACFGKPTPYTPIWMMRQAGRYLPEYMAVRDAAGDFLSLC
                     KDYKKASEVTLQPVDILGVDAAIMFSDILVVPLEMGMELKFIKGEGPVFENPILSMDS
                     LDKLSVEKAVKNLSYVYDTIKLTREKLSSDKALIGFCGAPWTIATYMIEGGSTKTYNI
                     SKKMLYDNPQFLHAILRKVTNALKLYLEEQIKAGVNAVQIFDSWASALEQNAYLEFGF
                     SYINELVDYIKSQYPDIPVIVFPKGISGFLNKIGGKFDVFGVDWSTPLKMAKETLGSR
                     YVLQGNMEPTRLYSKDAIDDGVDEILSIMRGHRHIFNLGHGILPDVPVENAKYFIKSV
                     QEKSAKYCK"
     gene            31463..32389
                     /locus_tag="RPW04_000399"
     CDS             31463..32389
                     /locus_tag="RPW04_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HDX6294518.1"
                     /translation="MSYDKKSYKYIFGPVSSRRFGSSLGIDLSPDKKCCNFDCLYCEL
                     ERAKAVTKIENPPSVKDIIVELKEALIEFKNVEVITLTANGEPSLYPNLKELVEQVNR
                     VKYTQKSLILSNGTAVLDKDKFEAILDLDIVKLSLDSAVQRTFRRIDRGIDKIDISNL
                     VSKMSDFRRVFLGKLVMEVLVVEGFNDTKDEFLALNEAFKIIRPDRVDISTIDRPPAH
                     NAKGVSTAILHELSSFITSAPIALASRKGLADKLDFNLDELRKLLKLRPQSKFDIENN
                     FTQSSKLVLQQLIKNGEIKEFDLAGSAFYKIK"
BASE COUNT        10969 a         4854 c         6566 g        10163 t
ORIGIN      
        1 tatggcaggt atccttaaaa ttgatgtaaa aactttatat aattggaaga aaaacaaacc
       61 agagctctat cgtatagtta tgcttggatt taaattcgac gaacttttat ggttaagtaa
      121 gcagaatttt gaagagatgc aaaaattagc tagagagaat caaaactacc gtttaaggta
      181 gcttttaatt gcaaattgac tataataagg aattgatttt ataaaagaaa gattaagatg
      241 tgtaatgaat attatatgaa tatagctata aataaagcat gggagtttca gtttcttacg
      301 tatcctaatc ctgccgtggg atgtgttata acaggtaaaa atggtgaaat tttatcgata
      361 aatgctcatg aaaaagcagg aatgccgcat gctgaattaa acgctataaa atatgcttta
      421 gagatgaaaa atccggcttt taagcaagat tttgacgaga taaaagatac aaacgaactt
      481 tataatttca taatgcaaaa tcattcaaat ttactaaatg gatcaactgc ttatgtgacg
      541 cttgaacctt gctcacatca aggacgtact ccgccttgtg cgaatttgtt aaaagagctt
      601 ggttttaagc aagttattat aggggcaatt gatagtagcg aaaatgcaaa aggcggtgag
      661 caaattttaa aaaatagcgg tataaagacc aaaataggag tttgcaaaga gaaagcagat
      721 gaacttttag agcctttttt ggcttggagt ttgggaaatt ttagtttttt taagatcgct
      781 ttaacacaaa acggtattgc aagcggtgga gttatctcaa atttacaaag tcgcactcat
      841 tcccataagc ttagatcatt agtagatatg cttgttatag gagggaatac cgtaagaaca
      901 gatcgtcctt tactagatac aagacttgta aaaaacggta aaaatccgga tattctttta
      961 tactcaaaag agtctaagtt tgacacgaca attcctcttt ttaatatttt agatagaaga
     1021 gttatagttt caaattcgtt agatgcggta tttgagcgta aatttgttat gtttgaaggc
     1081 ggagaaaatg cgcttttaaa tttagataaa agagtaaaat ggcttttgat ttatcgttca
     1141 aacgagttta aaataggcaa ggctatcagt ttgaatttaa aaattaagat tatgcatact
     1201 tctaaatttg aaaatgatga acttttatgg tgtaaaatat tagattaatt ttattaaaat
     1261 ttaagctaaa atatattata taaagtagta ttttatctat taaaagcctt atttaccata
     1321 tttataatat cttaagtaaa atttttatat aatagcgcaa ttttttattt aaaaaaggtc
     1381 gaaaatatgg atagattata ctcatataaa gataattgcg gttttggttt gcttgcaaat
     1441 ttacataatg tttctagcta tcaaaataca attgatgcca taacggctct tgagcgaatg
     1501 atgcatagag gcgctatagc gagtgatggc aagagtggag atggctgtgg tctacttttt
     1561 tcgatgccta cttcattcat gaaaaaggct gctaaagagt gcggcgttct acttcctgaa
     1621 cagtttggcg tagctatggt ttttttaaaa accgacgagc atatggaaaa atttgaggaa
     1681 atatgtctga aaaacgactt aaaagttatt ttaaaaagag atgttcctat agatgaaagt
     1741 gcattaggag agcttgcttt agagacttta ccgcgtatag ttcagttttt tatcacccct
     1801 aatagcataa ttgctaaaaa atattttagc tctttgctct accttgcaag acgtgaaatt
     1861 caaaaatact ttaaagaaga tgatgatttt tatgtctgtt catgctcgga taaagttata
     1921 gtttataaag gtcttataat gcctacttat ataaagactt tttttaaaga tttgagcgat
     1981 caagagtttt gcagtagttt tgcgcttttt catcaaagat tttctacaaa tacacttcct
     2041 aaatggcgtc tagctcaacc atttagaaca atagctcata acggagagat aaactcaatt
     2101 tctgcaaata gaacaaattt aactatccaa gaaaaatgct taaaaagcca taaatttaca
     2161 aatgatgagt taaatatgat gattcctatc actggagacg atagaagtga tagtgctagt
     2221 ttagataata tgtttgagtt tcttatacaa aatgacgtgg atttttttaa agccgttaga
     2281 ttagttcttc ctgctccatg gcaaaatagt ccatatacgg actcaaaaat acgttcattt
     2341 tacgaatata cgagcccaaa ttttgctcca tgggatggac ctgcggcagt atcgtttaca
     2401 aacggtagat ttatcgcttg ttgtttagat agaaacggac tcagacccgc aaaatatatc
     2461 atcacaaaag attcaagagt cttgatttct agtgagtacg gcgttcttga tatagatgag
     2521 agcaatatac ttgagcgagg acgcctacaa agcggtcaaa tgataggtct tgatctaaaa
     2581 tacggtaagg ttatgaaaaa cgatgagata aatgattata tcaaaaatag ccaagattat
     2641 acaaaatggt taaatgataa tatggttcat ttagaagaat tcgtagagat cgtttttgag
     2701 aagttaagcg attataagtt agacaatctt cacgctttgc aaagaaattt tagtataaca
     2761 aacgagttta aagagatgat tttatctcct atgattacaa gcggcaaaga agcaaccggc
     2821 tctatgggtg atgatacgag tttggctgca tttagtgact ctcaaagaag atttagcgac
     2881 ttttttaaac agaaatttgc ccaagtaaca aaccctccta tagatccact tcgtgagatg
     2941 gttgtaatga gtttaaacgt aactttcggt gagtttagaa actttttaga agagagtgaa
     3001 tttcatgcaa aacgtatcaa aacaacatct ccgattttaa tgcaggataa atttgaagtt
     3061 ttgaaaagtt tcggagatga aaatagtcct aaatttcaaa gcgagtttaa aaatcaaaca
     3121 tttagtacac tgtttagcga aaacttaaaa ggtagcctag aagatcttgt ttatgatgtt
     3181 ataaatgcta taaagaacgg agttcatatt gttttgcttg atgatagagg agtagatagt
     3241 tctaacgctt ctatgcctat ggctatggca gtaggtagag ttcatcaagc tcttatagaa
     3301 gagggacttc gccataacgt gactattata gcagttagcg gtgagatatt agactctcat
     3361 agctgtgcta tgatgatagg atacggagca agcgcagtat atccgtatct tctttttgcg
     3421 agtgcttatg agattttgaa agacaaggat gagacgcaga taaaatcagg tttaaaaaat
     3481 atccatcatg ctttaaacac cggacttttg aagataatgt cgaaaatggg tatatcgact
     3541 gtaggaagct ataaaaactc agctttattt gatgtcttag gtcttagtca aaccgtagtt
     3601 aatgaatgtt ttgcagcttc tagcgtgctt ataccaggac ttgaatatga cgatatagaa
     3661 aaaagaattt taaaatatca taaatccgct tttaatttcg gtgatcacct tatacctttg
     3721 aatttaggcg gattttacaa ataccttgat agagatgagt ttcatgacta tacgccattt
     3781 ataataaacc aaattcataa aaccagcata acgggcgata tgaatgattt ttctaaaatc
     3841 agagatgcca taaaaggtcg cggacttaga atggttagag attttcttga tataaaaagc
     3901 gataaagagc ctataagcgt agatgaagtg gagcctgcaa gtagtatatt aaaacgtttt
     3961 aattcagctg ctatgagttt aggttctata agtccagaag cgcatgaagc tctagcttta
     4021 gctatgaata aactaggagc tatgagcaac tcaggtgagg gaggagaagc caatcagaga
     4081 ttaaaaagtc ctgctaattc acagataaag cagattgcaa gcggaagatt tggcgtaact
     4141 ccggagtatt tagctagtgc taccgaaatt caaataaaat tagctcaagg tgcaaaacca
     4201 ggagagggcg gacaacttcc aggatataaa gtaacggaac ttatagcaac tctgcgttat
     4261 acgacgccag gggttactct tataagtcct cctcctcatc acgatatcta tagcatcgag
     4321 gatttagctc agcttatttt tgatttaaag caagtaaatc caaaagctac tatcgcagta
     4381 aaactagttt caagtgctgg agtaggtact atagcagctg gagttgctaa atgttacgct
     4441 gataaaataa ttataagcgg aggagatgga ggtaccggag ctgctggttg gagtagcatc
     4501 aaatttaccg gaaatccgtg ggaattaggt cttatagaag cacataatgc tttgaaagta
     4561 aataatctaa gaagcagcgt tcatcttcaa acagacggcg gattaaagat cggtcaagat
     4621 atcataaagg ctgcgttatt aggagccgaa agctatgctt ttggaacttt ggctttggtt
     4681 attttaggct gtaaagtatt aaaaatatgc catttaaatc gctgtaccga aggagttgct
     4741 actcaagatc cggctttaag gggtaaattt agcggaagcg tagatagagt cgtgaattat
     4801 tttactttat tggctgaaga tgttaggctt gagttagcaa aaatgggata taaaagctta
     4861 gatgatataa taggtagaaa tgagctttta agtccggtag agagtaaatt tgatatgagc
     4921 gaacttctaa gggttattga tggagataat aaaagtagcg gcaaaccaaa taatcctttt
     4981 gataagaatg aatttgaaaa aagcgtatta aaagaagttt ataaaactat acaaaatcct
     5041 gatgaaaaga tagtcgtcga taagcaaatt tgtaaccaaa atagaagttt tggcgctctt
     5101 ataagcggcg agatagcaaa atattacggt aatgaaggct ttgttagtca gactatcagg
     5161 ataaatttaa acggtatagc cggacagagt ttaggagcat ttttggctag cggagtagct
     5221 ttgtatctaa aaggcagtgc aaatgattat gtaggcaaag gaatgaacgg aggacgcata
     5281 gttataagcc caaatgatcc aaataactat tttgccgtag ccggaaatac ctgtctttac
     5341 ggcgctactg gaggcaagct ttttgctagt ggaatcgtag gagaaagatt ttgtgtgcga
     5401 aactcgggag ctactgcggt agtagagggc gttggcgatc atgcttgcga gtatatgacg
     5461 ggcggagtcg tagctatact cggaaacacc ggtataaact ttggagcagg aatgaccggc
     5521 ggaattgcct ttgtatggga tgaaaaaaga gagtttatag ataaattaaa tcaagaatta
     5581 gtcattgctt tacgtataga tactgatgaa atggacgaag caaggcactt tttaaagcgt
     5641 ctcattagag cttattataa cgagacaaaa agtgttagag ccaaatatat tttagataat
     5701 ttcagagatt ctataagaga attttggatg gtaaagccaa aagatatgac taaacttcca
     5761 ttaaatccag ccgacggaga ttaaaatgca agaatttaca aatttaacaa gattaaaaac
     5821 cataaaaaga gatgagggtg aaagaagcac ggactttaaa gaaatttatc aaatttttag
     5881 ccttcaaagt gcaaaggagc agtctagtcg ctgtgtgcag tgtgcaaatc cattttgtca
     5941 taatgcttgt cctttacata actacatacc gttttggctt ttaaatacgg ctaatttaaa
     6001 tttagaaatg gcttttaagc ttagcaatga aacaaatcca tttcctgaaa tcacaggtag
     6061 agtatgtccg caagatagac tttgtgaagg agcctgtact ttaaatgata atttcggtgc
     6121 tattaccata ggatctatag aaacatttat cacagaatca ggacttaata gcggttttaa
     6181 cccatttggc gatatagtat ttactgataa aaaagttgct attataggtt caggtcctgc
     6241 tggattaagc gttgctacat atcttataag aaacggcgta agagttgaaa tttatgaagc
     6301 aaatcataga gccggaggac ttttagcata tggaattccc ggattcaaga tagaaaaaag
     6361 tgttatagaa cgtcgtataa atatactaaa aaccgcaggt tgcgtgattc atacgaatag
     6421 ctttgtagac gactttaaat ttgaaagttt gatgagtgag tttgacgctg ttgttttagc
     6481 ttacggtgca agaacggggc gcgccgtagg acttgcaaac gaaaaagcta aaggtgttta
     6541 taacgctctt gattttttaa ctattttaca aaaagaacag tacaaagaga gtgacgcgag
     6601 tatagactta aacggtaaaa aagtagttgt tataggtggc ggggatacag ctatggattg
     6661 tttaagaagt gctataagaa aaggcgcact tagcgcaact tgcgtatata gaagagatct
     6721 tgctagtatg ccaggaagta aaaaagagtt tgtaaatgct actgaagagg gagcaaattt
     6781 tatatttaat gccgctccaa aagatatcgt agtaaatgat gaaaacaaag ttattgctct
     6841 aaatatatca aaaacactta ctaaagatgg taaagtcgag cttttaaagg gaggagaaac
     6901 aattataaac gccgatataa ttatactcgc tttaggattt gatgtagaaa atttaagctt
     6961 tttaagcgca aacggtattg agtttgataa aaaaggtagg gttgctacag ataaagagtt
     7021 cagaactagt aaaagcggtg tttatgcatg tggagactgt aatagaggaa gcgatcttgt
     7081 cgttaccgca gccgcagatg caaaacactg tgcaaaaact atactaaaag atcttggttt
     7141 ataaaaaact caaatttacc cgctaaatgc ttatttttta gcgggattca tttaatttat
     7201 catttttgaa ttcggtataa ttatgcaaaa aataggggaa gtattttgga atttgtaact
     7261 atttttgggt cggctagact tgatagcggt agtaaatttt ataaaatagc gtttgagcta
     7321 ggcaaaaaat tatcacaagc gggatacggt gtagtaacag gcggcggcgg aggtatcatg
     7381 gaagccgcaa ataaaggagc ttttttaagc ggcggcgtga gcgtaggtat aaatattata
     7441 ctaccttttg agcaaaaact caatccgtac tgcacggagt cgaaaaccat tgataattta
     7501 tcaaaaagaa aagatatgct tatagaaaaa agttccgcat ttattttgat gccgggtgga
     7561 tttggaacgc ttgatgagat ttttgaagtt attactttgg ctcaaacagg acttagaaaa
     7621 cataaaatag tgttttgttg taaagagttt tggcagcctc ttttagactt ttttgataat
     7681 gctctcgcag ctgaaaaact aattgccgat gatcactctg tttatgctgt tatagatgat
     7741 tttgatgaga taatcaggta tttgaaagat taattactct ttatttatat gattttggta
     7801 tatttatacc aatattttaa ggaaatgtta tgaatatgct atttagattt ttaggtagtg
     7861 ataatatcgc ttttagagag ctatttttta ctgatgcaaa aattgatata gaagttataa
     7921 gagacgatga gagtggtttt gtagctcaaa aagcgatata cgactgtaat aaaaaaaatt
     7981 cagatacttc gggcaattac gttgagaact gtgagcttgt gtttgtaccc gtatatactc
     8041 aaaaagtcag agtaaaaatt caaggttgca tagaacagag ttttaacttt gaagttatgc
     8101 ttccttttga ttctactcat ttcaagatac ttgcaaagta tagttcggag tatagagcca
     8161 tagagccgac aagtcaagat aacgatgaag gatactatat aagcttattt gagataattc
     8221 aaaatttaat gaagtcttca aggctcatca taaattactg gtctggagag tttgaaggtt
     8281 cagagatatc cgggcaaaaa cttcatatta tgaccgatag taataatata tatttgaatt
     8341 aatacaactt aaaatcatct taagctagct caaactagct taataaattt atctttgaga
     8401 aattatttca aatttgaatg atatgcttca aatttagatg gctttatgag acccttgttt
     8461 acaagttctt gataccagta atggtgcaat atataaacct cttcttcctc tttatatcct
     8521 gttatgatcg agtgtatagc gccttttata gcaaatgcag ccatatagat atgaactagt
     8581 aaaaacacgg cacatactat gccaagaaca ttatgaatta tagcgcttag tcttaaaatt
     8641 tctatctgag ttagtccaaa tgtgctggtt aaaatcgggg tattgaaatc caaaaagtac
     8701 atagccgcac cggttaatat cataacaaaa ccgccaccca ctgctaccca aaaccatgat
     8761 ttttgtcctg cgttaaactt tcctgcagga acgggatgtt tttcttttga aagatatccg
     8821 ccgactatca tcatccattt tatatcataa atagacggaa gcattctttt accccacatt
     8881 aaaagcatag gaacaatgct aatagcaaat aaaatagtag ctagaccgtg taaatttttt
     8941 accaatctta cgaaaaatcc tccgccaaaa ctatctcccc acatcattat aattcctgtc
     9001 ggtactaaaa ctatccaaga taatgctgct ataagatgga ttacgcgtac gtattttgaa
     9061 aaagcgtata tttttccgcc gtgatggtca aaatgttttg gacctactac catataatga
     9121 gctaaaaatg caaaaatcac agatagcatt gctattgcca cgccataaga gaagtactcg
     9181 ttaccttgca aatatgtcca taatgatcca aatccgctat cgtatctagt gatatttgct
     9241 atgcgatcat ctccccagat agcgctcatt tgctggtttg ttccttctag ctgatttatt
     9301 atatctttac tcatcagcgg caaagaacag gcaaataata aaagaaattt tctcatcaaa
     9361 aatccttgat caaattttga tttattctac attaaattta cttataattc acttgctgtt
     9421 atgtttagtt ttagaaatta ataattttat caaaatatat tttaataatg gcaaaaatgc
     9481 cgcttttgct attttcgcct tgaattttat aaataactat tttagtatat ttttaaattt
     9541 ggtttatcga atttttattt actataaatt ttattaaata aagatatgta taatatagcc
     9601 caaaaataga atagattaag gaataaattt gaaagttcta gtcgcattaa gtggaggagt
     9661 agatagctca atgagtgcaa aatatctact agaagcggga tatagtgtag taggttgcta
     9721 tatgaagttg cactcaaaac ccggttacca tgaagaaaat ataagaaaag ttaagaaagt
     9781 aggtgagttt ttaggcatag aaactcatat tttagactta gaagaagagt tcaatgctaa
     9841 agtttatgag ccttttgtga atgcttataa agagggtctt acaccaaatc cctgcgcaca
     9901 ttgtaataaa aatatcaaat tcggagcatt atggaaattc gctcagactt taggttgcga
     9961 taaaatggca acggggcatt atgcgcgcat agaagacggt ctcataaaag ttgctagcga
    10021 tcttagcaaa gatcaaagct actttttggc aaatatctct cctgaaatcc taccttatat
    10081 catatttcct cttggagata aatttaaagt agatataaaa gccgcagctg cgcaaatacc
    10141 acaaattgcc gagcttgcga gccaaaaaga gagtagcgag atatgttttg tggaaactac
    10201 ttatatagat attttaaaca aacatttcaa tactctaatg ccaggagtag taagagacgt
    10261 aagcggaaaa gtagtaggaa agcatgatgg atatatgcgt tatactatag gaaaaaggaa
    10321 aggatttagt gtagacggag ctcactcgcc tcactatgtt ttaaagatag acgcggctaa
    10381 aaatgagatc gtagtaggtc ttaaagatga gctttcaagt ttttcattca caactacgaa
    10441 ttttaacaac ttcacggaca aaaacgaact tgaatgcttt gtaaagatac gttacagaag
    10501 cactcctata ccttgtttag taagtaagct tgatgatgga gcaacagtaa agttaaaaga
    10561 taacgcaggc ggagtcgcaa gcggtcaatt agccgtattt tacgatgaat ttgatagagt
    10621 attagccagc ggatttataa gataatccgc atctaataat tttataataa acgcccttag
    10681 tataaagagc gtttatttaa tttaatgttt gattataaat cgatatattt ataactaatc
    10741 aaacaatctt aaatgagtaa aaagatgatt tcgtctttta taaatttatt ttctaaatac
    10801 tcttgagttg ccgactgtaa caccgttttg tatccattct tttatcgttg gatgtgcaaa
    10861 gaaagctgtg caaaatgata cgtattgatt gtatatattt gatagcggtt gttgtttgaa
    10921 gcttatcaag ccgttgctgt tatctgcatt tggtatgaga cattgacccc aaatgtactc
    10981 ttcgttactc caaaattctt tattgtattt ataatcatct tttcctacta ttgcttcatc
    11041 atctcctatt tgtgttttat cgccttccca ttttctaacc atattccaaa agtttatagc
    11101 agcgctatcg tcttgcaccc ccccccagag tttgaggttg cgaatttacc gtttatagta
    11161 tagtaagcag atactttgtt tatgtgcatt ttcatattta ttactgcttt ggcgactttg
    11221 gcatcgactt ttgtagctac tagtttaggt atcgccaaag acgctaaaac gcctaagatg
    11281 atcatcacca tcacaatttc tataatcgta aaagcttttt tcatgtattt tccttatttt
    11341 gtttgtttaa aatactttgc cgtctatgag cggtatttcg tttttgtatg tgccgtctgt
    11401 tttattatcg tcgtcgctta gttttagcca ttcttgtaac atttgtgagt tttgtacgtt
    11461 ttgacaaaat tcattttgcg tatctgtttt agcgatatat atcctagcag gtttgtcgtt
    11521 ttgtgagttt agaggtttga tatatatgca tttgtcccat ctttcgctac ttctttgcgt
    11581 gacttgagca tatgtagtag agatattttt taatacgaga tttgtttgat tagcatcttt
    11641 tgtgttagga aatgaaccgt ttcttatgtg gtacatagtt atctcattta atacttgttt
    11701 tatctcaaat accgttttgg ttatagcggc tcggttattt tcgccggtga ctcgcggtaa
    11761 aaaaacgaaa acaaatatta tcaccgctgc aatcagaata aatatttcga ttatccttgt
    11821 cataacttgc ctttttttgc atttggaaca atctattttt agatattttt atatttatct
    11881 gtttttgaat ttgtatttta gcattagtga gaatttattg catttttggt ttagtaaaaa
    11941 tttgcggtaa tgtaaattac cgcattctgc tttacaaatt tatttcggca ttcatacgcc
    12001 gcaaacaggt ttatcttgta aaattagatt atttcgcttc gctaacagcg ttgtaacgcg
    12061 gatctaggct tatcctacga cgtttggaaa gtcaaatacg actttgcctg atttgatagt
    12121 cactacgcta gcgcctttta gctttttgcc aagcagtgga gagtttttcg actttgattt
    12181 gtttaaattc tcgtcataaa tatactctaa atcaggatct atgatagcga tatcagctaa
    12241 aaatccctct ttaatcgcgc ctttgttttt taaatttagt atttttgcag ggttgaagct
    12301 cgtgagtttt accatttgtt cgtaatctat gacgccctca cgaactaaat ttaaagtaag
    12361 cggaacaagc gtttgaagtc ctaaaattcc aaatggagct ttgtcgaatt ccaaaaattt
    12421 ctcatcggtg tgatgcgggg cgtggtctgt gcagataacg tctataagcc cgtttttaag
    12481 cccgtttctc atggcttcta cgtcgttatt cgtacgaagc ggcggagaca ttttgaaatt
    12541 cgtatcataa tttataagct catcttcgct aaaggtaaaa tggtgcggtg tgacttcgca
    12601 agtgatattt accccttcat ttttggcttg ttctatgagc tttagggagt atgcgctact
    12661 tacgtgtgcg acgtgtatat gaccgcctgt gagttttgct aaaagcatat ctcttgagat
    12721 cattatctct tcttgctctc ttggcatacc ttttatacct aaaagcatag acatttttcc
    12781 ttcattcata tgaccgccgc gacaaagcga gcagtcttga gagtgattta tgatgaaact
    12841 tttgtgaaat gcagagtaaa gaagagcggc tctcataaca tcgcttgagc taacaggaag
    12901 tccgtcatcg ctaaatgcga cgcaaccagc ttcgctcata tctcccatct cggttatacc
    12961 tttaccttcc atgccttttg tgatggctcc gataggaagt aggtctataa gccctcgttt
    13021 tttagctttt gctatcatat cgcgggttac gacggcgttg tcatttaccg gatttgtatt
    13081 tgccatagga caagctgtgg ttacgccccc ggcgactgcg ctcatacttc ctgttatgat
    13141 atcgtctttg tactcaagtc ccggatctct aaaatgtacg tgcatatcga tgagtcctgg
    13201 cattactagt ttatttgtgg cgtctatgac aagatcggct tttggctctt ctgcggttat
    13261 ggatttgatc atctcgccgt ctatcaaaat gtttgctttt agtgtgccgt tttgatttat
    13321 gatagttccg ttttttataa gtgttgtcat agtttaagcc ttaaatttat tttgataaat
    13381 ggtttttaaa accgccattc ttatagccac gccgttttct acttggtcaa gtatgcttga
    13441 aaatctagcg tcgtcagcca cgtccgagtt tatctcaacg cctctgttta taggtcccgg
    13501 gtgtaaaatt atgacatcgt ctttagcttt ttgcatacga gttttagtaa gtccgaaata
    13561 cttactgtac tctctaatgc ttggaaacgc tacttcgcca tcactccttt cgagctgaat
    13621 tctaagcatg atgatagcgt cgcttcccat aaccgcttcg tccatatctt tgcatatatg
    13681 acagccgaaa acttcagcgt tttgcataaa cataggaggt ccaaaaagtt ttacttttat
    13741 acctaaggtt tgcatagcgt atatgtttga tctagcaact cttgagtgaa atatatcgcc
    13801 tattatagtg acgctaagac ctgaaaaact accttttgcc tcgtatatcg taagaagatc
    13861 aagaagtgct tgagtcggat gttcattgca gccatccccc gcatttacca cgcacgatgg
    13921 agtatttttt gttacaaatt tagccgctcc tgaactatag tggcgaacta tgaaaatatc
    13981 tgttttcata gcttctatgt tgtgtattgt gtcgatgaga gtttcacctt tgttcgtgct
    14041 agaagtgctt gaactaaagt ttatcgcgtc ggctcctaat ctttttgccg ctatttcaaa
    14101 actagttctt gtgcgagtcg agttttcaaa aaacgcattt acgaccgtga cgccttttaa
    14161 aatagggtct ttttttacag gttctaaatt tagagctttg taatctttgg ctaaacttaa
    14221 aatggaaaaa atatcatctt tggataggtc ttttgtggag atcagatctt tttttacgta
    14281 ggacattaga gactccttga ggctttaaat ttgcaatttt acaaaaaagt agcttaattt
    14341 ctaaatttaa gcaacaataa gttaaaattg tagctaaatt ttttgcgaag gtatgtgatg
    14401 cgaggttata aaattttttc tggtacggca aatgtcgagt tttccaaaat ggtggctaaa
    14461 tacttaggaa ttcctctaag cgaagctagt ataaagcgtt ttagcgacgg tgaaataagc
    14521 gtacaaatcg gcgaaagcgt gcgcggtaaa gacgtatttg ttatccagcc gacttgtgct
    14581 ccggcaaata taaatttgat ggagcttctt atattaactg atgctttaaa aagaagtagt
    14641 gcaagttcga taactgccgt tgtgccgtat tttggatatg caaggcaaga tagaaaagca
    14701 gctccgagag ttccgataac ggcaaaactt gtggcaaata tgatgcaaac cgcaggaatc
    14761 gacagagtcg taactatgga tcttcatgca ggacaaattc aaggattttt tgatattccg
    14821 gttgataatt tatatggcac gatagtgttt atggactatg ttaagagtaa aaatttaaaa
    14881 aaccctatag tcgcaagtcc ggatgtcggc ggtgtagcgc gtgctagagc tttagcaaaa
    14941 actatgaatt tggatatggt tatagtggat aaacgtcgtg aaaaagcaaa tgaaagcgaa
    15001 gttatgaacg ttatcggcga tgtgagcggt aaagatgtca ttttgataga tgatatgata
    15061 gataccgcag gaactatcgt aaaagccgca gagatattta agaaaaaagg cgctactagc
    15121 gttatggctt tttgcaccca tccggtttta tctggtcctg catatgagag attagtaaac
    15181 ggatctttag atgagcttgt agtaaccgat acgatacctt taaaagagca tccaagctgt
    15241 ataaaagtgc tcagcgtagc accgcttttt ggagaagtga taaggcgtgt ttatcatgat
    15301 gagagcgtca atagcttatt ttcttagtat aatttttgcg ataaatcgat gagttttgat
    15361 ttatcgcttg gcggactttt tgtctagcct ttgctctaaa atctacaata acatcgattt
    15421 ttcatcaaaa atattttagt tttttatatc gcttatttat atagggcttt tttaaattta
    15481 atcaaaaatc cagctaaaat ttgataatat ctctctacaa aatttactca ggaattttat
    15541 gaataacata cgaaatttta gcattatagc gcatatcgac cacggtaaaa gcacattagc
    15601 agatcgcatt atcggtgaat gcggagcggt agatagtcgc gtgatgagcg ctcaagttat
    15661 ggatactatg gatatagaaa aagagcgcgg tatcactata aaagctcaaa gcgtaaggct
    15721 aacttataag cttgaggggc aaatttatat attaaatttg atagatactc caggacacgt
    15781 cgatttcagc tatgaagttt cacgctcttt agcaagctgc gagggcgctt tgttggttgt
    15841 agatgcaagc cagggcgtcg aagctcagac tatagcaaac gtttatatcg cgcttgaaaa
    15901 caaccttgag ataattccgg ttataaataa aatcgatctc ccagcagctg aaccgcagag
    15961 agttaaaaac gagatagagc atatcatcgg gcttgattgc agtgaagcta tagaagtgag
    16021 cgcaaaaaca ggagtcggca taaaagagct gatagaaact ataattcgta aaatcccacc
    16081 gccaaaaccg ggtgaaaaca atccgtttaa atctctcatt tacgatagct ggtttgataa
    16141 ttatttagga gctttggctc ttgtgagagt ttacgatggt gccgtaaaaa aaggcgatga
    16201 agtttatgtt atgggaacgg ataaaaaaca tactgttctt gatctgatgt atccaaatcc
    16261 gatagctccg ataaaaacaa acgaactaaa aaccggtgaa gtcggtatca tagttctagg
    16321 tcttaaaaac gtaagcgacg taagcgtcgg cgatacgata accttagcta aaaatagagc
    16381 tttggaagcg atcggaggat ttgagaaagc aaaaccgttt gtatttgccg gactttatcc
    16441 tatagatacg gataaatttg aagatctaag agacgcttta gacaagctta agttaaacga
    16501 tagttctata agctatgagc ctgagacttc ggcagctttg ggctttggtt ttcgcgtggg
    16561 atttttaggt ttgctccata tggaagtcgt aaaagagaga cttgagcgtg agtttggatt
    16621 agatctgata gctactgctc cgaccgtgac ttacgaagtc gtgcagaccg atggcgtgag
    16681 cgtagaaatt caaaatccta gcgaactacc tccggtaaat aaaatagagt tcataaaaga
    16741 gccttacgta aaggctacta tcatcacgcc gagcgagttt ttaggaaaca ttatcacact
    16801 gcttaataac cgccgagccg ttcaaactaa gatggattat atcactacta caagagtttt
    16861 gcttgagtat gatataccga tgaacgagat agttatggat ttttacgata aattaaaaag
    16921 cgcgacaaaa ggttacgcta gttttgatta tgaaccaagt gattataggg ttggagattt
    16981 ggttaaactc gatataaaag tagcaggtga agcagtcgat gctctttcta tcatcgtgcc
    17041 tgaagaaaaa gcaatgagca agggcaggga ttttgtaaaa accatgaaag agttggttcc
    17101 aagacagctt tttgaagttg ctatacaagc aagcatcgga aataaggtta tagctagaga
    17161 aacggtaaaa tctatgggta agaacgtaac ggcaaagtgt tacggcggcg atataacccg
    17221 taaaagaaaa ctgcttgaaa aacaaaaaga gggtaaaaaa cgtatgaaag ccataggtaa
    17281 ggtaacgctt ccgcaagagg cgtttttaag tgttttaaaa atagattaaa atagaacgaa
    17341 atttgcttta aggaaaaata tgccatacgt aaatataaaa gtgacaaaag aaaacggtga
    17401 gccgacagta gctcaaaaag aggaactcat aaaaggcgtg accgagctat tgcacactgt
    17461 tttaggtaga aatagagcaa gtacggtcgt gatcatcgat gagatagaaa ctgaaaatta
    17521 cggtcttggc ggtgaaagta taaaaataaa aagaaagaga gaggaaaaga gatgaaagga
    17581 tttttgtttg cgctatttgc cgcgctattt tttataggtt gttctaacaa agccgttttg
    17641 gatccgtata cagatacgag tgcggcgaag tcgtatgaga ctattatgaa gataactctt
    17701 aattgtgagc cgtgcgcaga tacaaactat gaaacaacaa tcaacggata tacttataga
    17761 agcgacgtag cgataaattg ctgcacaaat ttgcgtaaga tcgatgccgg agccggcctt
    17821 aaaaaagtgt acttgcataa tatttcagat ttaagagaaa atagtaaggt cattaaagca
    17881 aacggaaaag cgtatagttt aaataaaaga ctcgatacgt tgttttatct agctatgaaa
    17941 gaggagctta caaatagagg aattttagta gtagatacgg aaacttcgcc atatactctt
    18001 agggtggatt ttggttttac cgattttaaa ggtgtttata gtccaggcgc tagtcagcta
    18061 aactcaagac ttcaaggtat tttgcgcatc aaaaatataa attacgacaa acgcatacag
    18121 ataaatacaa ggcagagcgt aagcggctta aatgcaaatg atgtgagtga ttttggttta
    18181 tatatggatt tgcttgtaaa acaagccgta aataaagcag ctgagcagat tagtaaattt
    18241 taaggatata atatgataaa atgggctttt atttttagtt gtttgatttt atttgtcggt
    18301 tgttccaaca caacttcggt tttaacacta tctccttatg aagcaaaagg agtaaatgtc
    18361 cgttcaaatt caaatattat tataaatagt atccttgata aaaggaaaaa tcagagtgta
    18421 gtggctacta ttaccgataa aaaaggcacg gtaagcgagt atatcacact aggaaataat
    18481 ctaactaatt ggtttagcga tgctttgata aaagagctta agaaaaacgg agccgtattt
    18541 ggcggtgatg atgcaaaagt cgtagatatc actattactg aacttaaagc aaatttaagc
    18601 ggatattcaa aagacaatat gcaaggtaca agtgaaattt acattaaaat ttataaagac
    18661 ggcgttacga cgacaaagcg catagctcaa cctcagaccg aatttgttcc tatagcaact
    18721 ggcggtgctt ttgaaccgtt tattaaaact cttttagacg atatgatagc tagaacggct
    18781 aaagctatct tggcaaatta atgcgatgtc ttaaatgtgg ctcatttacg tttaaattta
    18841 tatgtaaaaa ctgcaagaga gttttaagtg aatttgagag tggatgtaga gatattgacg
    18901 gatttaaagt gtatagtttt tacaaatatg acgatataaa gtctcttatc cactctaaac
    18961 accgcatgca cgggcatttt gtatttcgcg agttagcaaa gcttagtttt tctaaattcg
    19021 cagatacttt taaatttgat agtaatgtaa atgtcgtttc aatagacgat caaatcagta
    19081 gcggatactc tcacaccgca gttcttgctc acgctatgaa aagggaattt ttaaagccga
    19141 tatatggtgc attaagagct acaaacaaag taaaatattc gggaaaaact cttgagttta
    19201 gaaaaaacaa tccgcgaaat ttcaaacttt taaaagaagt taacaatcca gtaattttag
    19261 tagacgacat cataacgacc ggatctagta tgaaagaagc taaaaattta cttcttagtt
    19321 gtggtaaatt gccgcttttc ggattagttt tggctgacgc tagagaataa aggataaaaa
    19381 tgtacgaact tgcaaaaaag ctatttaata tcccaagaag tataaccgga gacggtttta
    19441 ggcgtagttt ggatatctta aatttagctg ctgggggggg gtataacgaa atttagtatc
    19501 ccaagtggta ctaaatgttt tgattggata gttcctgctg aatggatagt aagggacgcc
    19561 tatatcgtcg ctcctagcgg cgaaaagatc tgcgaattta aaaaacataa tcttcattta
    19621 ctaaactaca gcgcgccggt gcataaaaca ctgagtctaa aggagctcca gtctcacttg
    19681 tattctctcc cgcatttgcc agatgccatc ccttatgtta ctagttatta tgaaaaaaga
    19741 tggggatttt gtatcggtca taatcaaaag acatccctaa aagacgggat ttatgaagtt
    19801 tttatagata ccgagtttaa ttcaaaggga gaactaaatt acggtgaaat tttagtgcca
    19861 gcctcatctt gctcaaaaga tgaaattcta atctctactt atctttgtca tccgcaaatg
    19921 gcaaacaacg agctaagcgg acccgtagtt ttaactgagc tgataaaatg ggtaaaaact
    19981 ctaaaaaata gagagtttaa ttaccgtttt atcatagttc ctgagactat cggatcgatt
    20041 tgttatatca gtaaacatta tgaagcttta aaacaaaatg taaaagctgg atttgtgctt
    20101 agttgcatag gagacgagag agcttacagc gtggttttaa gtcctgatga ggatagttta
    20161 agcgataaag ccgcacttca tacggttaaa tttcttagta aaaatccaca aatttactca
    20221 tttttatatc gtggaagtga tgagagacag tttaatactc ctgatttaaa tttaggtatc
    20281 gtaacacttt gtaggagtaa attcggtgaa tacaaagagt atcatacgag cttagatgat
    20341 cttagtctta taactaaaaa agggcttgag gaaggccttc tttatgctaa aaatatgatt
    20401 ttaaatttag aaataaacaa aacctaccga ctaaatacga cttgtgaacc aaatttaggt
    20461 tcgcgcggac tgatatctac tataaataaa ggtgcgtatc caagcgatat gacgttaata
    20521 cgtgattttt tagcgtattg taacggtaaa agaagcgtta tagacatagc tgataaactc
    20581 ggcgtagaag ctaaaagctt aaaagattcg gtagaaaatt tgcttaaatt tgagcttata
    20641 aaggaagtaa gatgataaga aatgtttgtg attttttaga tatttcagta gcaaaaaatc
    20701 ctttcaaaaa agcatttgtg tttggagatg agagtataac ttacgctaaa tttgatgaga
    20761 tcgcggatag attagccagt gaaattttaa agttaaattt aaaaaatgaa gcggttttaa
    20821 taattttgcc aaagtgtatt tggactttgg tttcgttttt tgcagtggca aaaagcggga
    20881 atttctatac tttactagat atctcaacgc cgcttgagcg catagatcaa gttataaaaa
    20941 tcctaaagcc aaaagttatc atcacgcaaa aggattttaa attcgatttt gtgaatacag
    21001 taaagatatt ttgcgaggat tttagtaagt ttagcgtgaa taaaagtgcg ctaaaagagt
    21061 ctagaaacgc ccatatagat acaaatttac tctatgtatt ttttactagt ggaagcactg
    21121 gagtaccaaa aggagtaagt ataagccata aaagtgtgat tgattatact ttttgggttt
    21181 gcgagacttt tgagctgaac tcaagagaaa ccatagcaaa tcaagcaccg ttttactttg
    21241 ataactctat tttggatatt ttttcttgcg ttaaaagcgg tgctactttg cacattttgc
    21301 cgacttctat ttttgctttt ccaaataaag tattaagcta tttagaagag catagtgtta
    21361 gtttgatttt ttgggtgcct tcggtgctta cgtattttgc aaacgtgaat gcgctccaaa
    21421 atttcaaact tgagcatctt aaaaaagtac tgttttgcgg agagataatg ccaaataaac
    21481 agttaaatat ctggcgcaaa gctcttcctc acactctttt tgcaaatctt tacggaccga
    21541 ctgagataac agatgtttgt gctttttatg tttgcgatag aagttttggc gacgatgaac
    21601 cgcttcctat aggaaaagct tgtcaaaata ccgagctttt ggtttttgat gatgaactga
    21661 atttgataaa agagccgttt attaagggcg aactctatgt tagggggaca agtcttagcc
    21721 taggatactt tgcaaataaa caaaagacaa aagaagcttt tatccaaaat cctctacatg
    21781 ataattatca agatatcctt tataaaacag gcgatatagt ggcttttaac gagcgcggcg
    21841 aactgatttg ttatggtagg agagataatc agataaaatt tatggggcac agaatagagc
    21901 ttggagagat cgagatcgcg gctaactctc acttgcaggt tttaaactcc gtttgtatat
    21961 ttaaacaagg cgggatagcc cttttttacg aggcgaaaga ggagttgaat ttgaaaagtt
    22021 atcttttaga aaaattaccg aattatatgg tgccaaaaag attcatttta gtggataaat
    22081 ttgtgctaaa tccaaacggt aaaatcgata gaaaagtgct ttatgagctt atttaacgag
    22141 tttttaaatt cgtataacaa tggatttaag tttagcaata gcgcgcttag catagatagt
    22201 atcaaaaata aattagagca aaatattgct tgtttaaagc ggagtgaaga taactttttt
    22261 ctaatgcaaa acggttttat cacgtatttt ataaacgata taacaagttt tgatatgcaa
    22321 ggaacttata taaaacttat acgtaaaacg cctatttgtg agcttgaaaa tagatttttg
    22381 agtatcaata aatttagcgt ttttgataaa tatattggta tgagcttaaa aaatagcggt
    22441 tttagttttc aaagttatga tgaggttaaa aaagctttgc ttgatgatat cgatgagatt
    22501 tacggctttt ttataaatta ttttgataaa gagtatcttt ttataagcaa aaccgaactt
    22561 agaaatagaa tacaagaggg tcaagtactt ctcataaaac aaaataataa aataataggc
    22621 ggtttgatat attttttaaa tttgaactcg gctcatttgg attttatagc agttagtaag
    22681 gaatttaggc gaagcggtac tggacgtaaa ttgatgagtt gttttttggg attaaacgct
    22741 gggtatttca aactgttcgt aagagatacg aatataaaag ccatagagtt gtataaaaat
    22801 ttcggttttg agtttaatgc tataaaaatt tcgttttata ggaggaaaaa tgggatttaa
    22861 aaacgtattt gtcgtaggta aaaatcgcct ctgtttttag atgattttat agatattttg
    22921 tattatgaga taggggacgg atttataaat ttgagtttgg gaaacgatca aaaattaaat
    22981 attataaagg agcaaaaatg aatgagatca aagaactttt taatcaaata ggcagagatg
    23041 acgtaaatga gagtatggag gggcttttaa gcggtggaat tatcgatagc atggacataa
    23101 tggctcttgt cgcggcgatc gaaaaaacgt acaaaaaacc attacgcgca gagtttataa
    23161 caaatgagag ttttgagagc tttgctagtt taaaagatat gataaataaa gcgatgagat
    23221 gaaagctatc ttagaagcaa acggaaagct tgtttatgaa agagattttt taggggcttt
    23281 gaagcaaatc ggtataaaaa gtggcaactc tgtttgcgtt cataccgagc tttttactct
    23341 tgggaaaccg cttttaccaa aagatgagtt tttgagagtt ttattacact gtttttatga
    23401 agttatctgt aaaaatggaa ctcttattat gcctacattt acatatagtt tttgtaaaaa
    23461 tcaaatttat gataagctaa actcaaggag cactatgggc gttttgactg aattttttag
    23521 gcaacaaaac ggtgttgttc gtacaaatga tccgattttt tcttttgcaa ttagtggaga
    23581 taatcaagac gcttttttaa acgatacgaa aagttgtttc ggcaaaaatt cagtctatga
    23641 cgtgcttaaa aggatggatg gaaaaatagt gctttttggt actcaaaaac tcggctatac
    23701 atttactcat tacatagaag agcaagcaga ggtgagttat agatatttta aagagtttag
    23761 cggtatttta aaaaataaga atataaatta taaaagtata ttttattacg ttagagatct
    23821 tactaagaat agcgatttaa gtgtagataa aatagtaaat ttattacaaa aatccggtaa
    23881 ttttttagaa tgcgagttcg gatcttctac tataactgcg attaacgcaa aagactattt
    23941 taacgaagtt ctaaaagttt taaaaataaa tgaaacctcg cttttaaaac agtaaaagct
    24001 tattttaatt tttttatgca aataatgttt gtaaatttaa aaattgtcta tttagcaagt
    24061 ttttatcaaa ttttagctac aatcgttgta gctattttta aggataaaaa tggaagaaaa
    24121 tattttcagt tcaaatcaag atatcgacgc tatagacgtt gaagactcta taaaagcaag
    24181 ctacctagat tactctatga gcgttataat aggtcgtgct ttgccagatg caagagacgg
    24241 tttaaaaccg gttcatcgtc gcatacttta tgctatgaac gatcttggcg taggtagtcg
    24301 cagcccatat aaaaagtctg ctcgtatagt aggtgatgtt atcggtaagt atcacccgca
    24361 cggcgatact gcggtatatg acgctttagt tagaatggct cagaactttt ctatgagagt
    24421 tcctgcagta gatggtcaag gaaactttgg ctcagtcgat ggcgatggcg cagccgctat
    24481 gcgttatact gaagctagaa tgacggtttt ggcagaggaa cttttaagag atttagataa
    24541 agatacggtt gattttatac caaattatga tgatagttta agcgaaccag atgttttacc
    24601 cgcgcgcgta ccgaatttgt tgttaaatgg atcgagcggt atcgctgttg gtatggcgac
    24661 aaatatccct ccacatagtt tagatgagct agtaaatgga ttactcactc ttttagacga
    24721 taaagaagtt ggtttagagg atattatgac tcatataaag ggtcctgatt ttccaaccgg
    24781 cggtataatt tttggaaaaa agggtattat cgaagcttat aaaacaggtc gaggacgtat
    24841 caaactaaga gctaaaactc atattgaaaa aaaaccaaat aaagatgtta tagtagtcga
    24901 tgaacttcca tatcaagtaa ataaagccaa gctccatgca gatatagccg atcttgtaaa
    24961 agagaagctc atcgatggta taagcgaagt aagggatgag agcgatagag acggaattcg
    25021 tcttgttata gagctaaaac gcgatgctat gagtgagatc gtgttaaata atttatttaa
    25081 atctactcaa atggaagtta cttttggcgt tataatgctt gctataaata ataaagagcc
    25141 aaaagtattt tctcttttgg agcttttaaa gctgttttta aatcatagaa aaacagttat
    25201 catcaggcgt actatttttg aacttcaaaa agcaagagca agagctcata ttttagaagg
    25261 tttaaaaata gcgcttgata atatagacgc ggttatcaat ctgataaaaa ccagcgccga
    25321 tacaaactct gcaagagacg gtttgatggc taaattcgga ctttctgaac ttcaaagcaa
    25381 tgctattctt gatatgaggc ttagtaagtt aacaggactt gagagagaaa aattagaagc
    25441 cgaactaaaa gagattttag agcttataga aaaactagac gcaatattaa aaagcgaaac
    25501 tttgatagaa aatataataa gagacgagct tttagaaatc aaatctaaat ttaaatgtcc
    25561 gcgcatcacc gacatagtcg atgattatga tgatatagac gtagaagact tgataccaaa
    25621 tgaaaatatg gtagttacca taactcaccg cggatatata aaacgcgttc ctagtaagag
    25681 ctatgaaaag caaaaacgcg gtggtaaagg caaggttgca gtaactacgt atgatgatga
    25741 ttttatagag agtttcttta cttgcatgag tcatgatacg cttatgtttg tgactgatcg
    25801 cggtcagctt tactggctta aagtttataa aattccagaa ggcagccgaa ccgcaaaggg
    25861 aaaagcggtt gtaaatctta tatcgcttca agcggacgaa aagataaaag ctatcatacc
    25921 tacaacggat tttgatgaga gcaaatcttt agctttcttc actaaaaacg gtatagtaaa
    25981 acgtacgaat ttaagtgagt ttaaaaatat tcgttcaata ggcgtgaaag ctataaattt
    26041 agatgataat gatgagcttg tgactgttgt aatcgctaat agcgagcctg atgagagcta
    26101 tgatgatagc tttgaagatg gcgaaggtgt ttcaaatttg caaaccataa gcgaagataa
    26161 ctccgaaaac agtcttgaga gcggaaaaat gctatttgct gttactaaaa aaggtatgtg
    26221 tatcaaattt gctttaaata aagtaagaca gataggaaga gttagccgtg gcgtaaccgc
    26281 tataagattt aaagagaatt tagatgaagt tgttggagca gtcgttatag aaaatgattc
    26341 tcaagaaatt ttaagcgtga gccaaaaagg tataggaaaa cgcacaacgg ctgatgagta
    26401 tagattgcaa agtcgcggag gtaaaggcgt catttgtatg aaattaactc caaaaacaaa
    26461 agatcttgtt ggtgtagtaa tggtagatga agagatggat cttatggcgc taacatcaag
    26521 cggcaagatg ataagagtag atatgcaaag catcagaaaa gcagggcgta atacaagcgg
    26581 agtcatagtc gtaaatgtag atggcgatga ggttgtaagt atagcaagat gccctaaaga
    26641 agagagcgat gatgacgata ttgttgcaga tgatactcaa gaacaagata tggaataagt
    26701 tttgcttaga atacataatt taaatttaag gtaataaata tgaaatcatt aatttttgca
    26761 ttactagtag tcggtgtttt cgtaggttgc gccgcattta ctccagagcc taaaacacaa
    26821 gatgttgtgg ttcaaaaagt agataaagac gacctaagag aaataatcaa aaacgataaa
    26881 atgttagccg gtatggagat aaatccagag gctatttttt cagcagtcgg cgagggaatt
    26941 cctcctatag atacagttag tcctgctcaa gctagagctc ttgctaaacg ctcagcagta
    27001 gcagatgcct atagacagct tgcgagtaaa ctttatggag ttaagataaa cgctaaagat
    27061 actgtaaaag atgctatgct aagagactct gttatagaaa caagggtgac tggtcttatc
    27121 aaaaatgctg ctattataaa tcaagatttc aaagacggac ttttccgtgt tgagatggaa
    27181 cttaagatag ataaagacaa gtggcaagag ctttttgctt actagttatt tctacacttt
    27241 tgtttggtgg tgaggagttc atattttggg ctaaatactc atcatcaaac agccttataa
    27301 aataccaaaa tatatctatt tcaaaagcta tggttcttag caaagaaaaa ggtagtaaaa
    27361 tatgcgatat acaatcttct aaatttaaca acgaaactac tttaaattat ctcaaacgtc
    27421 atcaggagca gctttttgaa tgttttataa atcaaaaagt tttgttaaaa gatagctcta
    27481 aatttaaagg aaatagtgca aacttaaaaa ctagcgttac gcttgtacca gtgcggttta
    27541 tagtggaatt taagcctctt ggtgctacaa taagcaaaat aaataggtga gataatgaat
    27601 gttgtaattg tcgaagatga tataaatatg agaaaatcat tggaaatcgc acttggcgat
    27661 tacgatgagt tcaatataaa aagttataaa agcgcgactg aggcactgaa aaaacttgaa
    27721 gataacacgg atatcatagt tacagatata aatatgccag gaattgatgg acttgagttt
    27781 ataaaagagc ttggcggtaa atttgatgtt attataatga ccggaaacgc aactttaaat
    27841 agagctatac aaagcgttag actcggagtc aaagattttc ttacaaaacc ttttgatgta
    27901 gaaactttag taactgctat aaaaagaaca aaaacattaa gctcaaaaca atctataaaa
    27961 caagactctg cagccgttca agaaggtagt tttttatcaa catctccaaa tttacaaaaa
    28021 gcattaaata tagctaaaag agcggcaata acggatgtga gtgttatgat aatgggagaa
    28081 agcggcgtcg gaaaagagtt gttttctaaa tttatccatg aaaactcaaa gcgaaaaaac
    28141 gagcctttta tggctataaa tatggcagca attcctgaaa atctccttga aagtgagcta
    28201 tacggttatg aaaaaggtgc atttaccgat gcaaccgcta ctaaaaaagg attatttgag
    28261 ttagcaaacg gaggaactct ttttttagat gaaatcggtg aaatgccgct aaatttacag
    28321 ccaaaattat taagagctat ccaagaacgc gaaatcgtac gagtaggcgc tagtaagcct
    28381 atcaaaattg atgttcgaat catatctgcg acaaatgcaa atttagaaaa aaaggtaaaa
    28441 gaaggcgagt ttagagagga tcttttttat aggttaaata cagttccgct ttttgtgcct
    28501 cctttgcgcg aaagaaaaga tgaaatttta ggtatagcaa acagtgtttt acaaagagtt
    28561 tgtattggat acgaactagg cgaaaagtca tttagtgatg aggctatgag tgagcttttg
    28621 ggttatgatt atccaggaaa tataagagag cttatcagca tagtcgaaag agctgctata
    28681 ttaagcgaac aaacaaatat atcaaaagac gatctattta tatatgcaaa gagataattt
    28741 tactgaattt aaagtaaatt tttgttaaaa taatagccta aatttcagat taaggcttaa
    28801 aatgaaaaag tatagcgtag cagtagtcgg tgcgacaggt gctgttggag aagaaatatt
    28861 tagagtgctt gaagaggttg attttcctgt tggaaattta cttcctttag ctagtagcag
    28921 aagtgccgga aatatcgcag aattcagagg caaaggctat gaaatagttc agcttaccga
    28981 cagcgttttt gaagaaaacg agattgatat agcatttttt agtgcaggag gaagtatatc
    29041 agctcatttt gcacctctag cagctgcaag cggcgctgtt gttatagata atacaagcca
    29101 ttttagaatg gatccagaag tacctttagt agtcccagaa tgcaatcccg aagatataaa
    29161 tttatggaca aacaaaggca taatagcaaa tccaaactgt tctactatac agatggtaca
    29221 agtcttaaaa cctcttgatg atctatttgg tatagaaaga gtcgatgtaa gcacatatca
    29281 agctacaagt ggagctggaa aaaaaggtat ggaagagttg attcttcaaa tgcagaagtt
    29341 ttttgaattt aagttagatg agtgtgagcc aagcgcattt aaacatcaaa tagcattaaa
    29401 tgttatacca catatcgacg tatttttaga caatgactat acaaaagaag agatgaaaat
    29461 ggtcaatgaa acacaaaaga tattgcataa aaatatagaa gtaagcgcca cttgtgttcg
    29521 tgttccggta cttaggagcc atagcgagag cataactatc aaatttaaga cagatatcaa
    29581 cgtagaaaaa gccttaaatg ttctaaaaaa tgctcctagc atagtaattc aagatgatcc
    29641 agcaaataat ctttatccga tgccgatcct agctagcgat acaaatgaaa catacgtcgg
    29701 caggatcaga aaagataatt atagagatga tatactgcat ctttggtgcg ttgctgatca
    29761 gatacgtgtc ggtgcagcta caaacgcagt gagaatagct caaaaatggt gtcaaataca
    29821 agaccattag ctaaaaaata gattaaattt aatatttaat ctatttccat ataattattt
    29881 tttaaattta tattaaggtt tttaatgctt gaaaaatttt ttgaaatgat gctttggaag
    29941 tcgcgttacg tgactatttt gcccgtcatc tttggattaa tcggttcttt cgttatgttt
    30001 atagtagcta gttatgatat tataaaagtt ataatttatg catggcaata ccttattttg
    30061 ggcgatcaca gtatagatct acatagcgat gcagtaggtc ttattatagg tgcgattgat
    30121 ttgtatttga tggcgctagt attttttata tttagttttg gaatttatga acttttcatc
    30181 agcgaaatag atagtataaa aaactcaaaa caagccagag ttttagaggt gcatagttta
    30241 gatcagttaa aagataagat cggcaaagtt atagttatgg ttttagtagt aaattttttt
    30301 caaagagtgc tgcacgctaa attctcagct ccacttgaga tggtttatct agcggtttct
    30361 attttggctt tatgtcttgg actatatttt ttacataaaa gttcaagcca ttaaattttt
    30421 ataaaggata atatatgatt tttatagatg catgttttgg taagcctacg ccttatacgc
    30481 ctatttggat gatgcgtcaa gcaggaagat acctacctga atatatggct gtgagagacg
    30541 ctgcaggcga ttttctatct ctttgtaaag attataaaaa agcaagtgaa gtaactttac
    30601 agccagttga tattttgggt gttgatgctg ctataatgtt tagtgatatc ttagtagttc
    30661 ctcttgaaat gggaatggag cttaaattta taaaaggcga aggtcctgtt tttgaaaatc
    30721 ctattttatc aatggatagt ttagataagc ttagtgttga aaaggcggtg aaaaatttaa
    30781 gttatgttta tgatactata aagcttactc gggagaaatt gagttcagat aaagctctta
    30841 taggattttg cggagctcct tggacgatag ctacatatat gatagaaggc ggcagtacaa
    30901 aaacgtataa tattagtaaa aagatgcttt atgataatcc tcaatttctg catgctatac
    30961 ttcgtaaagt tacaaatgcg ctaaaacttt atttagaaga acagataaaa gccggagtaa
    31021 atgcggttca gatatttgat agttgggcta gcgcacttga gcaaaacgca tatcttgagt
    31081 ttggttttag ttatataaat gagctggttg attacataaa atctcaatat cccgatatac
    31141 cagttatcgt atttccaaaa ggtataagcg gatttttaaa taagattggc ggtaaatttg
    31201 atgtatttgg agttgattgg agtactcctc ttaaaatggc taaagaaact ttaggatctc
    31261 gttacgtatt gcaaggaaat atggagccta caagacttta tagcaaagat gctatagatg
    31321 atggagtaga tgaaatttta agtattatga gaggtcatag gcatattttt aatcttggtc
    31381 atgggatact tccggatgtg cctgttgaaa atgcaaaata ttttataaaa tccgttcaag
    31441 aaaaatcagc aaaatactgt aaatgagcta cgataaaaaa tcttacaaat atatatttgg
    31501 tccagtaagc agtagacgct ttggcagttc tcttggaatc gaccttagtc cggataaaaa
    31561 atgctgtaat tttgactgcc tttattgtga attagaacga gctaaggcag ttacaaagat
    31621 agaaaatcca ccttccgtaa aagatataat cgttgagtta aaagaggctc tgatcgagtt
    31681 taaaaatgta gaagtaataa ctctaaccgc aaatggcgaa cctagtttat atccaaattt
    31741 aaaagagttg gtagagcagg taaacagagt aaaatatact caaaaatcgc ttattttaag
    31801 caacggaacc gctgttttgg ataaggataa atttgaagct attttggatt tggatattgt
    31861 gaaattaagt cttgatagtg ccgtgcagcg cacttttcgc cgtatcgaca gaggtataga
    31921 taagatagat atctcaaatt tagtatcaaa aatgtctgat tttagaagag tttttttagg
    31981 aaaacttgtc atggaagtgc tcgtagtaga aggttttaat gatactaaag atgagttttt
    32041 agccttgaat gaagcgttta aaattatccg ccccgataga gtcgatatca gcactataga
    32101 tagacctccc gctcataatg caaaaggcgt tagcactgct attttgcacg agttatctag
    32161 ctttataact tctgcaccta tagctcttgc tagcagaaaa ggacttgccg ataagcttga
    32221 ttttaacctt gatgagctaa gaaagctttt aaaacttcgc cctcaaagta aattcgatat
    32281 agaaaataat tttactcaaa gctcaaagct tgtattgcaa caactaatta aaaatggaga
    32341 gataaaagag tttgatttag ccggatccgc tttttataaa attaagtaga gactattttt
    32401 tagcttaaat ttcggttttt tgcattgtgt attttattga tttttaaatt tatgttattt
    32461 tatatttttg actcatttga ctcaaaaata taatttttaa gtttactaag ttaaatttag
    32521 tgctttttta ttgacaaaaa tagaactttt ag
//
LOCUS       DAPPKW010000009        32254 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.009, whole genome shotgun sequence.
ACCESSION   DAPPKW010000009 DAPPKW010000000
VERSION     DAPPKW010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 32254)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32254)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32254
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.009"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..471
                     /locus_tag="RPW04_000400"
     CDS             <1..471
                     /locus_tag="RPW04_000400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phage capsid protein"
                     /protein_id="HDX6294519.1"
                     /translation="NKGWFTLAKESTKTKKLEHKAASKITDRLIAMVENANEDVLNQS
                     VIIVSKKDLIAYNKEIGGKNGGLSILLNKGADNILGVPLIGASFVKSGEYMLTPLKNL
                     IFSIGLDIRRQRWYDNEESSLKYKFEVFCDYQIGVPEWVVLSTTNEADSDGDGV"
     gene            461..760
                     /locus_tag="RPW04_000401"
     CDS             461..760
                     /locus_tag="RPW04_000401"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294520.1"
                     /translation="MEFEKLKESLEARAKASLLNPNEITAEALEFSTNETLEFCKGKE
                     VQSWAVMDFAMTRLKIYLKIELSEADIILLKNACKEIDASKIIEGKGGGLLWAAV"
     gene            745..1110
                     /locus_tag="RPW04_000402"
     CDS             745..1110
                     /locus_tag="RPW04_000402"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294521.1"
                     /translation="MGGGLKKTVELIKKTFTGVKFISANGYINQAGLYLSFNGLTPLS
                     ALGDSAHFSIYFCANSLENDNFAALTQIDELREKVFKLGANLGENLFKNCELIANKDS
                     SLYTYAINFTINLNGEKNE"
     gene            1103..1801
                     /locus_tag="RPW04_000403"
     CDS             1103..1801
                     /locus_tag="RPW04_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294522.1"
                     /translation="MSKTTRLAAGEIRFAPYLNDGTLGEEIVLGYNQRATLSRTAETK
                     ELLSNDESLGQSVAELETKVTYEFSTEIGDLSLKNIAIAFKGLVETKNYAPGDIFWNG
                     KTLLDGSSAITSAKVGDLVIKDSKIYTIAEAITSSTEFADIKTANKVYKASSSFIKPE
                     KKTNNVGRLIFDGKNLSTGKLQILIIPKINLKFDGDFTIVGDDFAKLSLKGKVLRLEG
                     QELFTLIDGENDEN"
     gene            1791..2255
                     /locus_tag="RPW04_000404"
     CDS             1791..2255
                     /locus_tag="RPW04_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294523.1"
                     /translation="MKTRYPFELKIDDKTYALEFVEINKSSAKELAKEIKKFSDEIEK
                     IEIIRDEIEHTKATIEINKELANSLIGSEKIEILKENKELLKILENKNKALKAAEAKE
                     ISIDELAKKRFGFCIAGESANKLKIDLDSLGISYSAVMSAIDEEVARSKEKK"
     gene            2285..2500
                     /locus_tag="RPW04_000405"
     CDS             2285..2500
                     /locus_tag="RPW04_000405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294524.1"
                     /translation="MSPAEFGLSEYESMLLGGLNLSAGFEVGFGASYCKCDSLVLKEY
                     CKNCGIDFLWAYSVFKRYANVLNRVED"
     gene            2715..7994
                     /locus_tag="RPW04_000406"
     CDS             2715..7994
                     /locus_tag="RPW04_000406"
                     /inference="COORDINATES: protein motif:HMM:TIGR02675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HDX6294525.1"
                     /translation="MANDDLKIKITIDTDTKQVIVARNEVNKLGSSLLGTDTAANGLK
                     NSLRSAVYSAAGLIGVSIGIKELASSFIKTSDAMKDLDGRLRLATSSLGEYKKQQIAL
                     MGVANSSFSRISDVTNLYIKMSQGLKQVGFATDDITRVTNNFTKALQLGGATAEESSS
                     AILQFSQAMGSGVLRGEEFNAVNEASPKLMQYLADSISVPIGALRNLAAEGKLTSDIV
                     ANALLKAGDAINADFANMPITVSRSLTLVKNELADLTKNVDKELDITGLLSDKFKNFS
                     GMLSENKESITAFFGFIGENKGTLGVLAIALTTNALKAKLFSAALKLLNVDAMSSNRT
                     FRQMSIEQKALVVATNSARNAFIALKVALSSFLPAAAIGGAIMGISMLMDHFDKAKTS
                     AQSFNNALSMTRSELEKLSHASVSNALIGAKNELKDLQEEFNDLNRDLRLNYKFNYLG
                     NGKAIPTKFANNDDIVEKAARMDELAKKIKEIYNLQNDLNLLKSQKSSEKNSSEAERQ
                     ALNEQYKQVTALGEKYKDVKIPVELEEQLKAVNADLKKINELKDTGADIGDTLDKAKA
                     KKAELEKKIAEEQKKSQEESKKAREDAKRANAVYLEDKAAYYKTIKDYANANAIELLK
                     YEKELNEKVQKGNLTKLEKATALNAKKIELEKATAAEIKRINEDAINDELNKLDENIE
                     LYKITAQYEKMAAEQKKKARLEAQEFIKKYKNLSQKEISEIYKFYELEAARKADSAVD
                     KFKNSFEEIKDSWNVTVSAMGKNIEDNLFDFITGKTTSLNNAFRQMGKEMFASFISPY
                     ARSFSSSAAGLFTGLLGGGNGGVASFANSYGLELKNGVYSGDIKGSRVEILSDGTVKS
                     GGNVLGEILNVGSSVTSIANLANGSTLSGLSGLFNGGAGLSLGGLQSSLVGSLYSPFG
                     FLANGATSLGMGGLGSGIASFGGGFANAFGLNSLAFNGFGSAFGGGIAAGLGSLAGGA
                     ALGGLGGFLGDKLFGTQTKATQIGALGGAIGTAILPGIGTTVGSVLGSLVGGAFGTWK
                     QHDYGVYLGQNLNANSNSSFSSTDIQKYVDSEKKSWFGSKSKTDLSALDDAALKSINS
                     AISKVSFLLKDFSGGEFNLPARKYNKNTFYDEALGGAIISSVTGKEYNKALDFGNPGE
                     LEAIWRNWEAVAKDASKSVFEVLSEAAAEVSGTMQTLKIASFNSDLEKLKYQSNYALD
                     SFKALGAGLLETSNNIKDIAQISAEDIKNAYQNAIKADFSKETISAFNELVNAYNSAT
                     SAQKAYSDALKSFVETAYNALISIKSAYGDSVETLSLDAISAQWGLLNTELKGLFPTI
                     QAAAQAFRNMSNADMAEFLKADTDLKNSLIASTAKYITYANNANANLQKEFENYKTTV
                     ANANAQILRLQKEKEKSSLEATIKNYEASKAIYQKLTDIASDLKFKIYDKAEINAVYS
                     NSLQKVKSDLTNGEYNSANLDELQKSALAKAENLKNSSISAEQYRFEVLKMANQIENI
                     APKDFRQSVEDSLNAANKQLKKLEDALGENSDAQINVLKESISSATTNFASLMSQNAG
                     LFATLGGSFAENFNAILKEFQNVNKANSNLVLNTGQIQAPSSSSSKTVTANGAVLTNP
                     KDFEVNSYYQQILGRSAEDAGLRYWSDSHLNGAELKAAMEYAVWRETGTTDKETLRRI
                     QEKQGLKMFADGGIVTRPTAAMIGEAGYPEAVIPLQGGRGVKVDMDGAFTEVVSELKA
                     LKEELRAIKQNGVYNNRFLNENSDGSALLVKVV"
     gene            7997..8845
                     /locus_tag="RPW04_000407"
     CDS             7997..8845
                     /locus_tag="RPW04_000407"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294526.1"
                     /translation="MTILEPVDFELVSSDAANENYEEWSLNKSVIADSFYTYKNRIYK
                     AASTFNADKTPDVDVRFVDFGATNKYKFIDEFINTQTKNNGALNIVVKPKDNIDIATF
                     LGLEGENLMIEDSVVPLYFRKSRNWWEYFYAATKYLSTINLPVDTRMQDLSFSITPIN
                     GFAKLGMLMLGKRRHIGHTLSGAKSGLVDYSRVTKDAWGNATIIPGKTAKTAECSVVI
                     ETQDIDYIRDFVSKLAGVPTVYLLDDNINKNIGAFTVYGMLKDFSISTVSQEKSELNL
                     LIEGLI"
     gene            8845..9432
                     /locus_tag="RPW04_000408"
     CDS             8845..9432
                     /locus_tag="RPW04_000408"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294527.1"
                     /translation="MQVLTALPEPPSSKNTTQFDAKADAFVNALPIFTQQINTLSAQI
                     QEEFQTVANNATAVATQLQNVKDYANISAANLAQSIDIRDSFALNLEELKSIDTHCKN
                     IEQDLMLKEKQYELFLQSKDSYMADLESLKTTFLQAISGTQLSAYITKTEFVDLTRAM
                     EEKVNNAITDLENKNKVFIENNSNFLAKKIMIGGI"
     gene            9433..10875
                     /locus_tag="RPW04_000409"
     CDS             9433..10875
                     /locus_tag="RPW04_000409"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294528.1"
                     /translation="MEVIKEFYKGSISATTDVLEPSENTRFISNIFIKQKSNAAKVSI
                     TLNEEPISQNFIMQYGDANIVEANLVLAKGDKLGISVDNKLEDDFNQALMQKLIAIMA
                     TGEKFCDIKNGFMLTTKPVISGSNMVNEYCIYDFNLKQIYSIKLNIDNSNKIYMLNNG
                     VIFYGSSNVFFNFLTKKAEQLSGIASGSLFRVGAHAAIYKKTDTASCVFLNSGKLKEI
                     PLTPSHYNVQAIYNNFLITYKNNANAVNLVTGALISSQNSQIMMNVLNNLVYLHNTSS
                     FNTKVYSIDKFEQIINAKFESTGINALCEYQATASLRYNVCNTGVVSVPTSNSIIYGK
                     DGVIAEFSKPSGTQGSSVGATDGKLFFLPLNNNKLGVYASDAEKIAEFDYDFGSSLTT
                     TKVISGKDVILVLTGTQNAHFLYDKTLKTLTPIVLNPVYTLMGDDKNGYEILDSEGNS
                     HYYNLGDKELSQRARGKPEVFVKIDGVEIS"
     gene            10891..11265
                     /locus_tag="RPW04_000410"
     CDS             10891..11265
                     /locus_tag="RPW04_000410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294529.1"
                     /translation="MKVNNIVSNKFVDLEGINHEQEYNKDRPVIVQSAQIDFSAGNNF
                     LVPAGVGTNLSFSAKNQELFKNVGKTGFIMVYTTVAGFSSAFKVINPEFVIASSATNI
                     YSYFINPIDGKICIKWGGYKLI"
     gene            11262..11945
                     /locus_tag="RPW04_000411"
     CDS             11262..11945
                     /locus_tag="RPW04_000411"
                     /inference="COORDINATES: protein motif:HMM:NF024702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-rich repeat protein"
                     /protein_id="HDX6294530.1"
                     /translation="MKFQDALFSDKIFNFIDIPANAYTNNTNFSGKFVPQYVSSIGDY
                     AFYLNNFNTPLYFPYCKNIGDYAFSRREYDSIINLRFGDVDTIGKFAFYLDGYNKTWG
                     NYRLSFGNVGTIESNAFNTAYLNTKVDVTFCNVGIIKSHAFAANMFTTDVDKGFRFKN
                     VDRIESGAFNGFNGSFHGVASFENVRVIENGAFNGQNFSVLKLPDKFRTRAELVRIGV
                     GNPDMFKID"
     gene            11968..12510
                     /locus_tag="RPW04_000412"
     CDS             11968..12510
                     /locus_tag="RPW04_000412"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294531.1"
                     /translation="MRIYNLETKQIEDKEVLIDTSGTFFVENLQKEKLKELGYLQVVE
                     ESFDNELEILEYKEIDGVYKGVKKEREDKADILKFRAYELWKANRANAVERIEVTLNN
                     CKLYDSGDVDDSVIFQGDETSQNRIARALSVASSANLTSTLWTAKNNKVYELKIEQLA
                     QILLKAGQAQTQIWNTDRPE"
     gene            12514..12762
                     /locus_tag="RPW04_000413"
     CDS             12514..12762
                     /locus_tag="RPW04_000413"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294532.1"
                     /translation="MQKELLFEKFENDMRKRTRFMRFLLALDQMANVVFWNGSQDETV
                     SSHIGRRIKANKATFFDKKLCCFLKKLERNHCDNSLGE"
     gene            12768..13133
                     /locus_tag="RPW04_000414"
     CDS             12768..13133
                     /locus_tag="RPW04_000414"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294533.1"
                     /translation="MNYIYTILGVLTVALLIYFNSVISKLELENTSLKSSLNTATLSN
                     ESYEKTLEILSSDYQKGLEVLANLKQEKQKEIRYVTQVKERIIKDNNSTCIDAINAIY
                     ARLHEQRDSNKQAIRDAKN"
     gene            13120..13281
                     /locus_tag="RPW04_000415"
     CDS             13120..13281
                     /locus_tag="RPW04_000415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294534.1"
                     /translation="MPKISFIPVIAQIPLMDFNRTALTEQEAALMAWDLYTYIRELEL
                     SVQSVKEMK"
     gene            13361..13711
                     /locus_tag="RPW04_000416"
     CDS             13361..13711
                     /locus_tag="RPW04_000416"
                     /inference="COORDINATES: protein motif:HMM:NF027409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294535.1"
                     /translation="MGEFLERLLDNLGVYKYVFIIGIIGGVLSVFQKKKLDHCSGSKK
                     CIFLGLILDTTTALFVGYIGFEIAFYFLGKQGISVGLAGLSAWAGTDAIVAWEKKLIA
                     LLTNNKFGGRDGEF"
     gene            13698..14252
                     /locus_tag="RPW04_000417"
     CDS             13698..14252
                     /locus_tag="RPW04_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan domain protein"
                     /protein_id="HDX6294536.1"
                     /translation="MANFRKSMEILLKLEFNNPHDALHKNKTENGFTFMGIYQGAHAS
                     WSGWDIVKNVLSTNADIKIASKILYENKILKKMVFDFYEREFWDKMRLNGVESQIIAD
                     EIFCFGVNAGVKTAAKLAQKLAGVQPDGIIGIKTLSALNLVDEDKFSLQYDKLEIQHY
                     ESLVAKNPANAAYLNGWKNRANAV"
     gene            complement(14575..14976)
                     /locus_tag="RPW04_000418"
     CDS             complement(14575..14976)
                     /locus_tag="RPW04_000418"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294537.1"
                     /translation="MEKIWWLHKRYISFFKNLDPDFLIENFGSKTPIAPPSEKELASV
                     IGVSTATLYNWYNGKGHRKKLYDFITKFTAKEILDICAKEKDSVSDKTLSEISKIPYP
                     TLQGWKRRKDRQVLYKLLKSFTQNELSSFFS"
     gene            complement(15304..15903)
                     /locus_tag="RPW04_000419"
     CDS             complement(15304..15903)
                     /locus_tag="RPW04_000419"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294538.1"
                     /translation="MKVNVVKENDKITVQAPKGARAWKWFSNLGGVVNDATGKWEFED
                     DDDILEGILNCLKKHYGYIHTNDVADVRVTALKEVKSYKSAVCLGGFILCSSFGKNTT
                     SRVGENVFLIDGTISGDGNAPNSYSVVDKGAIFKIKNFPKSLALEENEDFKIEILEKQ
                     SIGYRTRGLKLLEDSLVLLEKGGVDITPVKIFLENEEGK"
     gene            complement(16063..16743)
                     /locus_tag="RPW04_000420"
     CDS             complement(16063..16743)
                     /locus_tag="RPW04_000420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294539.1"
                     /translation="MWGSSALLHELINSSQWRIRCEIEQSDKAKNKLISAHMDELRKD
                     PARMEAWISALEAFLDNKLVYWLTWGFWRNGKQDKVEWKVCSDIVEFFYSGVEYKITD
                     EHRENYFRKREKEDAAKIIKVLKAYLSGKQLVRRKDRPEFKEDLEWEKVGDNHYFLFG
                     THDYKLEDEEFIEDKYNLTLPNKPVVPVDLEFIKFRDPATYRYYKPRFITITKFDQQP
                     YAFTKEGC"
     gene            16952..17227
                     /locus_tag="RPW04_000421"
     CDS             16952..17227
                     /locus_tag="RPW04_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013889894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294540.1"
                     /translation="MYPYELSRGIASRVQIALNLALDAKILLLDEVTSSLDETNTNRV
                     IEILLRLNIQKVVITHDENLAFTLCDEVLVLEDGRMTYFGDKIGYFS"
     gene            17224..17883
                     /locus_tag="RPW04_000422"
     CDS             17224..17883
                     /locus_tag="RPW04_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013469161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6294541.1"
                     /translation="MSLEIINLKKSYGKTEVLKDISFYLKSGESVALMGASGSGKSTL
                     AKCIARLESINRGSIIYNRKDILNLKNAEFRQNIQYVFQDQLTALNPSKRVKDLLISV
                     LKRFKIDKKDEFEHILSDAKLPYSILDRFPKELSGGERQRLGIARAMLIKPKILILDE
                     VTSALDKRLKSEIMHTLMHYKTLHKTAMIFITHDKFIAKEYFDRILMLECGRLIFDKT
                     S"
     gene            complement(17876..19141)
                     /locus_tag="RPW04_000423"
     CDS             complement(17876..19141)
                     /locus_tag="RPW04_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HDX6294542.1"
                     /translation="MLIAAFIFLITMVLVIWQPKGFGIGTSAVLGAAMAYMFNVVSVD
                     DILEVVSIVWDATLTFIGIILFSMVLDKIGFFEWSALFVAKLAKNSAKKMFIYLILLG
                     AFVSALFANDAAALILTPIILAKMKILKLNLKTITAFLLSGGFISDAASLPFVFSNLT
                     NIITANYYKISFSAYMYDMSFAFIASVITSTLFLWLIFRRDIPKSVNASLLKEPKTAI
                     KSVKLFKFSWIFLIMLLCGYFLGDFLGLPVSLFALGGAIIFLCVAAKSKVVSAKDLLK
                     TAPWQIVWFSIGLYVVVFGLKNAGLLEFVRGILVYFSSFGEFSFVMASGFLSAILSAV
                     MNNLPAIMIMDISLDGISSKAAIYANIIGSNVGVKLTPFGSLATLLWLFILQKNGIRI
                     SIKSFFKFSFMITPPVLFVVLISIYIWVS"
     gene            19264..19878
                     /locus_tag="RPW04_000424"
     CDS             19264..19878
                     /locus_tag="RPW04_000424"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HDX6294543.1"
                     /translation="MKVSIKEAAEILGITKEAVYNRIRRNSLKSEEINGVKYVILDDK
                     TVKKPSNKTIKTKNQDEFTNFLLSQIENLKEINKRLSADKDRIFKEKEQLLLAKNEEI
                     KEIYKNSDERLKRFLQMLENSLNLPSQTQKPLAIDVEYEEIKDKNWITLSDFLLNLKI
                     KPKKLKKLQNYLLKCVKKGKLSKLENGVIYIKAGLSYEKVKEKM"
     gene            19875..20510
                     /locus_tag="RPW04_000425"
     CDS             19875..20510
                     /locus_tag="RPW04_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0323 family lipoprotein"
                     /protein_id="HDX6294544.1"
                     /translation="MKHIKTLKEISKISGVGAILIFGLAACGNTEQSSGGSAVQEASQ
                     KQGATVFIEKNSDGSYKIADEFPSNETRVFLREPGADGAISERLLSQSELDKLMQEEN
                     AKIDAGTSGLTNQNASVSGGGMSLGETILASAAGAIIGSWIGSKLFNSPGYQNQRQGA
                     YKNPSAYNRSVNSFNKAGTAAASPKANAGKSGFFGGNKAATSSSTSTTSGG"
     gene            20573..20860
                     /locus_tag="RPW04_000426"
     CDS             20573..20860
                     /locus_tag="RPW04_000426"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294545.1"
                     /translation="MQAVNELKSIFNSYINITNKFNKDDSFSKLLDESSAKLDELENK
                     MNELKSIAKNDEEMFKVFDFMQIMTQLMYGNVDEKERDKLLSKAAKISNSL"
     gene            20875..22053
                     /locus_tag="RPW04_000427"
     CDS             20875..22053
                     /locus_tag="RPW04_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002951509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HDX6294546.1"
                     /translation="MMNLKSIKALDNEYLESIGFSWHTDPDNTPYVADELVVVSQDEC
                     EAYYKAANELYDMYVTAAQYVIDNNLFHELGIPFNLIDTIKHSWENDVHWHLYGRFDL
                     AGGLDGKQIKLIEFNADTPTSLFETAIVQWAMLKFNGMDEEAQFNDLYDSLVENFRRL
                     ITLEEDTSKFDEYYEGWGILFSSIANNIEDENTTRLLQSAAIDAGFKTEFAFANQVDF
                     SDENGISYNGENYEYWFKLIPWENIAVEEGELALILKNIIENQKAIILNPAYTLLFQS
                     KGIMKILWDLYPNHPLLLESSFEPLKGKKQVKKPFLAREGANISIINENGETELETDG
                     EYANGKFLYQEFADFNKDSKENSYQAGLFFAFEGSALGFRKGGLVLDNYSKFVGHVIK
                     "
     gene            22053..22595
                     /locus_tag="RPW04_000428"
     CDS             22053..22595
                     /locus_tag="RPW04_000428"
                     /EC_number="2.5.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002786337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HDX6294547.1"
                     /translation="MKTLVAISGASGAHLGIKLANAIASLENDTHMIISENALISMQK
                     EGFNEKVDKNIRIYSNNEIWAAPASGSSKFENMIIAPCSINSLAKIASSISDNLILRA
                     AAVMIKEHKKLILGVREMPLSAISLRQMADLATLGVIIAPPIIGYYSEIKSLKDMENF
                     VIGKWLDTLEIKHDIFSRWK"
     gene            22708..23640
                     /locus_tag="RPW04_000429"
     CDS             22708..23640
                     /locus_tag="RPW04_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HDX6294548.1"
                     /translation="MKIVCLDADTLGNDIDLKSVFSEFGEFISYPKTAPNETINRLKD
                     ADIVLTNKVLITQEVINSLNLKLICVTATGVNNVDLDAAAKAGIAVKNVAGYSTNSVV
                     QQTFANLLSITNQTKYYDSYCKDRVGWAKSPIFVHLNDPIYELSGKKFTVVGLGTIGT
                     KVARVAKSFGCIVSYYSTSGKNSSNEFQKVSFDELLKSDIISIHAPLNANTKNLFDEK
                     VLSNLKDGAIIVNSGRGGIVDENAVAKLVDEKNIYFATDVLETEPMREDHPFLNVKNK
                     NRLLITPHIAWASVEARKCLVELVAKNIRDFIKG"
     gene            23643..24140
                     /locus_tag="RPW04_000430"
     CDS             23643..24140
                     /locus_tag="RPW04_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HDX6294549.1"
                     /translation="MADEHSFDISASVDIMEVKNALETAKKEVSSRFDFKGLKAQIEL
                     NEKEKTITLISSSDSKIDALKDIVLSKLIKREIPPVAITELKRESAGGANTKCSLKLN
                     DTLDSLNAKKITKVIKDEKLKVNASIRGEEVRVTSKSIDELQNVIKLVKDLNLELPLS
                     FKNLK"
     gene            24150..24821
                     /locus_tag="RPW04_000431"
     CDS             24150..24821
                     /locus_tag="RPW04_000431"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294550.1"
                     /translation="MGFEFKKTVLIGALAISTFLSAATEGTEYIKLTKAQQIPNADDK
                     IIELLSYGCIHCYNHFKNGTLKFVSEFFPEFKYEEWQVKQMGEYGYQMAEVLAYAKML
                     DGKSGINSLSVKSSFHQILKAYFEANFKQRKRYNDANAFYQVAIDVLKNQLNKDVSVQ
                     DIIDYAKSDAGKKQIQRFDDGFEVAKLNGTPAFIIKGKYLINLEKIGSAEELVEVISE
                     IVKLD"
     gene            24909..26216
                     /locus_tag="RPW04_000432"
     CDS             24909..26216
                     /locus_tag="RPW04_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005869780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HDX6294551.1"
                     /translation="MTFSNIAQNLAIKYADFKMQRSLYNGLNIDILQNNLPKIADTNK
                     TYMLYAHVPFCHTFCPFCSFHKYDYDESAAKKYFYSLRLEMEQIKEAGFDFHSMYVGG
                     GTTLINENELLKTLEHAKKLFNINEISCETDPNHIEPNNLKCFSGLIDRLSIGVQSFN
                     DEILKKVARYSKFGSKDLLIEKLSKAVGILPITSIDLIFNFPFQTKDELLYDIQTATA
                     IDSEQVTFYPLMKSNITKDKIAASLGHSSKDNEREFYEIICSKFKNYYQNNAWSFSKQ
                     SSNLKDEYVGTGNQYVGVGSGAFSFLNGELLINAFNLDEYSERVNAYRSAIIAKCKFK
                     KRDKIRYLFLTQLFDGKINIDKFNRENEVNLKLDLYLEITLLKTTNAIKIIDKEIILT
                     DFGRYLCVVLMKEFYIGMDKVRATFRDDAKIKYKKRLRIMDKL"
     gene            complement(26372..28081)
                     /locus_tag="RPW04_000433"
     CDS             complement(26372..28081)
                     /locus_tag="RPW04_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDX6294552.1"
                     /translation="MKYLKDFLNDNRSSEIFQILECDKDELEILKYMTRSFIQGVSQM
                     SVFDLLNTVFTDKDFGYLDYISNLKNLIDLGYISQNFSFFKENAKQKSSRLSMLYTEV
                     ELSELFLVLLEDGKATSQVPPNEPYNDHLEYLKDQFLRIELYQKKVSNHSQNSKAKLD
                     KKIAITENLIEHRLKISKIPLACEQIFKENSLNSKEQVIFLALLKEEYSGEFEALRDL
                     NTLISLVSKDDMERMKSRSLLEDGSNLLESGLIDYDEVLNAFGSVSRSFFITEEILQL
                     IMHPQNSKKTKKLKLETLVKESDIFELIEPNSDLNDVVLNEQTKELLDDILKQVDKKV
                     LTRLNTWGIKSRKSAQVKVIFYGSPGTGKTMSALSLAKSLKKQILSFDCSKILSKYVG
                     ESEQNVRKIFDTYKEICSKTKTEPVLLLNEADQFLSTRIETSSGSDKMHNQMQNIFLE
                     QIEKFEGVLIATTNFMQSLDHAFSRRFDYKIEFKKPDFKARLEIWKRVLPQNGSFESG
                     FSIEKLAKHALSGAQIMLVLKNAALKTAISEDGIFTMKIFENEIKREISSAFDEDKRV
                     GLL"
     gene            complement(28078..29622)
                     /locus_tag="RPW04_000434"
     CDS             complement(28078..29622)
                     /locus_tag="RPW04_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HDX6294553.1"
                     /translation="MEYKFNNYYEMLISSANEHPKSIAIFDDKKKISYEELRNKVDMC
                     AAFLQSNSISYSDKVAMIVTNSPEFIVAFLAITSIGAVAVPINTFLKKNEFEYILNDC
                     DAKMLIVSNSHLEEILGLERKTNLRKIAVIGEYEKPNDKYTSFYLYEEFSPCKINQNV
                     SIDDISSIIYTSGTTGHPKGAVISYKNVFSNLVGINRIFTITNKDRFIVYLPMFHSFT
                     LTVMVLLPLFSASAAVIVKSVFPFSNVLKQTLLKRVSVFLGVPAIYAAMAKAKIPWYF
                     KWFNSIRYFVCGSAPLAKQTIDDFAKIFPRAQLLEGYGLSECSPLVSVNRPEHKKISS
                     VGLPLAEYNVKIVDDEMMEKNIGEVGEIIVKGDNVMQGYLNNPGATDDTIINGWLRTG
                     DLGKIDEDGFLYIVDRLKDLIISKGQNIYPREIEEIIYRLEEIEACAVIGIKDESEDE
                     DVVAFVQLKDGINIEAIKIKEFLKKHLANFKIPKHIYFADELPKNAAGKVLKRVLKDK
                     VKDKLG"
     gene            complement(29625..30908)
                     /locus_tag="RPW04_000435"
     CDS             complement(29625..30908)
                     /locus_tag="RPW04_000435"
                     /inference="COORDINATES: protein motif:HMM:NF015316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HDX6294554.1"
                     /translation="MINLKRALLLASCASLANAAGYKIPEQSSDAVALSASNIAYSFG
                     PDAAYYNPANMMYFEDSRHYFENSFSYIHLGSSTFNPQFPNAHNYAVSSKNADFLIPT
                     FNFISPEYIPNWRFGLSFAVPSGLDMRWVDKYPASTARLFSLRVFEINPSVAYRVNDK
                     ISIGAGARAIYSYGKVDTNPYGMVSNSFLLEANRHIDGNDLSFGWNVAATYRPFSNLS
                     FAATYRSKVNLDLKGDANIVSKTTPNLSALAGFNGFYNGSVDVKIPLPAALNLAMAYK
                     VKDVTFLAALERSFWSELVSFNFNYATRVPSEEVFDHPVEKKWKDSNTYRFGIVWDVN
                     DKLRLMSGFAYDESPSNVNYIGFELPDTRAYIYSLGINYKFRDDLEFAIGYLYQQRKD
                     RHINKEDNVASFNNIVGEMANGDAQILNFGIKYRF"
     gene            complement(30908..31756)
                     /gene="nfo"
                     /locus_tag="RPW04_000436"
     CDS             complement(30908..31756)
                     /gene="nfo"
                     /locus_tag="RPW04_000436"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HDX6294555.1"
                     /translation="MKYIGAHVSASGGVSNAPLNAKSIGADAFALFVKNQRQWSAKPL
                     TKSEISSFKTNLKNANISLEHILPHNSYLINLGHPDPQQRKKSIDAFLDEIYRCDLLD
                     LKMINFHPGSHLKEIDENICLSNISSSINYILENSSGIKLVIENTAGQGSNMGFKFEH
                     LGYLVKNSCDKNRIGVCIDTCHLFCSGYDIRSKSAYEKTMDDFGKIVGFEFLSGMHLN
                     DSKCDLASRKDRHESLGKGCIGWSGFENIMNDKRIDEIPLILETIDNSIWADEIIALR
                     NLIKGN"
     gene            complement(31753..32211)
                     /locus_tag="RPW04_000437"
     CDS             complement(31753..32211)
                     /locus_tag="RPW04_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012001025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294556.1"
                     /translation="MLLLVFYISVLSGCATLSSERSKSITLLIKSKNLKINDAGFIHF
                     YKNYTNLQIYASGKSILDLRIKDQICVNGACDDKLVFNQKFFLSSHYAGLLEDILNQN
                     PIYFGADLVTTICGFEQIISKISVEYKVCDGKMSFVDQKNDIKIIMKEID"
BASE COUNT        11609 a         5262 c         5900 g         9483 t
ORIGIN      
        1 aacaagggct ggtttacgct tgcaaaagag agcactaaaa caaaaaaact agaacacaaa
       61 gcagctagta aaataacaga taggctgatt gccatggtag aaaacgcaaa cgaagacgtg
      121 ctaaaccaaa gtgtgataat agtaagcaag aaagatctaa tagcttacaa taaagagatt
      181 ggcggtaaaa atggcggatt atcaattttg ctaaataaag gcgcagacaa tatccttggc
      241 gtaccgctaa ttggcgcaag ttttgtaaaa agcggcgaat acatgttaac tccacttaaa
      301 aatcttattt tttcaatcgg gcttgatata cgtcgccaac gctggtacga caacgaagag
      361 agctctttaa aatataaatt tgaagtgttc tgcgactacc aaataggcgt accagaatgg
      421 gttgtattaa gtactacaaa cgaagcagac agcgacggcg atggagtttg aaaaactaaa
      481 agagagttta gaagctagag ctaaagcttc tttactaaat ccaaatgaaa taaccgctga
      541 agcgctagag tttagcacaa atgaaacact agagttttgc aaaggcaaag aagtgcaaag
      601 ctgggcggtt atggattttg ctatgactag actaaaaatt tatctaaaaa tagagctaag
      661 tgaggcagac attatcttgc taaaaaatgc ttgtaaagag atagatgctt ctaagattat
      721 agaaggcaaa ggcggcgggt tactatgggc ggcggtttaa aaaaaacagt tgagcttata
      781 aaaaaaacgt ttaccggcgt taagtttata agcgctaatg ggtatataaa tcaagccggt
      841 ctatatctaa gctttaatgg cttaacgcct ttatccgcgt taggcgatag tgcgcatttt
      901 agtatatatt tttgcgcaaa cagtctagaa aatgataact ttgcagcgct tacccagata
      961 gatgagctta gagaaaaggt gttcaagctt ggagctaatt taggcgagaa cctctttaaa
     1021 aattgtgagc ttatagcaaa taaagactca agcctttata cgtacgctat aaactttacc
     1081 ataaatttaa atggagaaaa aaatgagtaa aacaacaaga ttagcagcag gagagataag
     1141 atttgcaccc tacttaaatg acgggacttt aggagaagag atagtcttag gctacaacca
     1201 aagagccact ctaagccgca ccgcagagac caaagaattg ctaagtaacg acgagagttt
     1261 agggcaaagc gtagcagagc tagaaactaa ggttacttac gagtttagca cagagatagg
     1321 agatcttagc cttaagaaca tagctatagc atttaaaggt cttgtagaga ctaaaaatta
     1381 cgcccctggt gatatttttt ggaatggtaa aactttgcta gatggatcta gcgctataac
     1441 tagcgcaaaa gtcggggatt tggttatcaa agactctaaa atttacacta ttgcagaagc
     1501 tataacaagc tcgaccgaat ttgcagatat aaaaaccgca aacaaagtct ataaagcaag
     1561 ctcaagcttc ataaaaccag aaaaaaagac aaacaacgtc ggtaggctga tatttgatgg
     1621 gaaaaatcta agcacaggaa agctgcaaat tcttataatc ccaaaaataa atttaaaatt
     1681 cgacggcgat tttaccatcg ttggagatga ttttgcgaag ctatctttaa aaggcaaggt
     1741 tttaagacta gaaggacaag agctatttac tttaatagat ggagaaaacg atgaaaacta
     1801 gatatccgtt tgagctaaaa atagatgata aaacatatgc tttggagttt gttgagatta
     1861 ataaaagcag tgccaaagag ttagctaaag agataaaaaa atttagtgat gagatagaaa
     1921 aaatagagat tataagagat gagatagagc acacaaaagc aactatagag ataaataaag
     1981 agcttgcaaa ctcacttata ggctcagaaa agatagaaat tttaaaagag aataaagagc
     2041 ttttaaaaat ccttgaaaac aaaaacaaag ctctaaaggc cgcagaagct aaagaaattt
     2101 ccatagatga acttgctaaa aaacgttttg gtttttgcat tgcaggagag agtgctaata
     2161 agctaaaaat cgacttagat agtcttggaa taagctatag cgcagttatg agcgcgatcg
     2221 atgaagaggt cgcgaggagc aaggaaaaaa agtagaacga attcttgctt gcgtggaagc
     2281 taagatgagc ccagctgagt ttggcttaag tgagtatgaa agtatgcttc ttggtgggct
     2341 aaatttaagc gctggatttg aagtgggatt tggggctagc tattgcaaat gcgatagcct
     2401 ggtcttaaaa gagtactgca agaattgcgg aattgatttt ttatgggctt atagcgtctt
     2461 taaaagatac gctaatgttt taaatagggt tgaagactaa gagtcttttt tgtacttatg
     2521 gggattgagt ttataatcaa gccagatata aaaagggaat aaaacgatga aagatataag
     2581 ttgtacgtac atttcttcta tatttgctat tataccaaca gctagaatta tcacaaaaat
     2641 aatccaaaga aattttttaa tatcttccat tttgatatcc ttttttatca ttataccaca
     2701 ttttaggcta aaaaatggca aatgatgatt taaaaataaa aataaccata gacacagata
     2761 ctaagcaagt tatagtagct aggaatgaag taaataagct aggcagtagt ctgcttggaa
     2821 ccgatactgc tgctaatggt cttaaaaatt ctcttaggag tgcagtttat agcgcagcag
     2881 ggttaatagg agtaagcata ggaataaaag aattagctag ctcttttata aaaacaagcg
     2941 acgcgatgaa ggatttagat ggaagattgc gccttgcaac cagcagttta ggagagtata
     3001 aaaaacaaca aatagcccta atgggcgtgg ctaatagctc tttttcgaga atctccgacg
     3061 taacaaattt atacataaaa atgagccagg gcttaaagca agtaggattt gcaacagatg
     3121 acataactag agttactaac aattttacta aagctttaca actaggtggt gcaactgcag
     3181 aagagtctag ctctgcaata ctgcaattta gccaggcgat gggatctggg gttttgcgtg
     3241 gagaagagtt taacgcggta aatgaagcaa gcccaaagct tatgcagtat ctagctgata
     3301 gtattagcgt tcctataggt gcgcttagaa atcttgcagc agagggtaaa ttaacaagcg
     3361 atatcgtagc aaacgcactt ttaaaggctg gagacgctat aaatgcagac tttgcaaaca
     3421 tgcctattac tgttagcagg tctttaactt tagtaaaaaa tgaattggcg gatttgacaa
     3481 aaaacgtaga taaggagcta gatattactg gccttttatc agataaattt aaaaatttta
     3541 gtggaatgct aagcgaaaac aaagagagta taacagcttt ctttggtttt ataggagaaa
     3601 ataaaggcac tcttggagta ttagctatag ctcttactac aaatgcttta aaagctaaat
     3661 tatttagcgc tgcactaaaa cttttaaacg tagacgctat gagtagcaac cgaacattta
     3721 gacaaatgag tatagaacaa aaggcgctag ttgttgctac aaatagtgct agaaatgcat
     3781 ttatagcact aaaagtagcg cttagcagct ttttgccagc tgcggctatc ggtggcgcga
     3841 taatggggat aagtatgctt atggaccatt ttgacaaagc aaaaacaagc gcccaaagct
     3901 ttaataacgc ccttagcatg actagaagtg agctagaaaa gctaagccat gcatctgtat
     3961 ctaacgcttt aataggtgca aaaaatgagc taaaagatct gcaagaagag tttaatgatt
     4021 taaacagaga tttgcgattg aactataaat ttaactatct tggaaatggt aaagccatcc
     4081 ccacaaaatt tgctaataac gatgacatag ttgaaaaagc cgcaagaatg gacgagctag
     4141 caaagaagat aaaagagata tacaatctac aaaatgatct taacttgcta aaatctcaaa
     4201 aatcaagtga gaaaaacagt agtgaagcag agagacaagc tttaaatgag caatataagc
     4261 aagtaactgc actaggcgaa aaatataaag acgttaagat accagtagag ctagaagagc
     4321 aacttaaagc agtaaatgcg gacttaaaaa aaataaacga gctaaaggat accggcgcag
     4381 atataggaga tacgctagac aaagctaagg ctaaaaaagc agagctagaa aagaaaatag
     4441 cagaagagca gaaaaaaagc caagaagaaa gcaaaaaagc aagggaagac gctaagagag
     4501 caaacgccgt ttatttagaa gataaagccg cttactacaa gactataaaa gattacgcaa
     4561 acgctaatgc tatagaactt ttaaaatatg aaaaagaact aaacgaaaaa gtacaaaaag
     4621 gaaatttaac aaagctagaa aaagctactg ctttaaatgc caaaaaaatc gagctagaaa
     4681 aagctactgc tgcagaaata aaaagaataa acgaagatgc cataaacgac gaattaaaca
     4741 agctagatga gaatatagag ctttataaaa ttacagcgca atacgagaaa atggctgcag
     4801 agcaaaagaa aaaagcaagg ttagaagcgc aggagtttat aaaaaaatat aaaaatctaa
     4861 gccaaaaaga gatatctgaa atttataaat tttatgagct agaagcagct agaaaagcag
     4921 atagtgcagt agataaattt aaaaatagct ttgaagagat aaaagatagc tggaatgtta
     4981 cagtatctgc tatgggcaaa aacatagaag acaatttatt tgattttata acaggtaaaa
     5041 caacatcttt gaacaacgct tttaggcaga tgggcaaaga gatgtttgca agctttataa
     5101 gtccatatgc aaggagtttt agcagtagtg cagcaggatt atttacaggg cttttaggtg
     5161 gcggtaatgg cggagttgct agttttgcaa atagctatgg cttagagtta aaaaacggag
     5221 tttatagcgg agatataaaa ggtagccgag ttgaaatact tagcgatgga acagtaaaga
     5281 gcggcggaaa tgttttagga gagatactaa atgtagggag cagcgttact agcattgcaa
     5341 acttagcaaa tggaagtacg ctatctggat tgtctggact atttaatggt ggggctggac
     5401 tatctttagg cgggttacaa tctagcttag taggctcttt atactcgcct tttgggtttt
     5461 tagcaaatgg agctacaagc ctaggaatgg gtgggctagg aagtggtata gcaagttttg
     5521 gaggcgggtt tgctaatgcg tttgggttaa actctttagc gtttaatggg tttggtagtg
     5581 catttggcgg tggaattgct gcagggcttg gtagcttagc tggtggagca gccctaggtg
     5641 ggcttggtgg atttttagga gataaactat ttggaacgca aactaaagca acacagatag
     5701 gagcgcttgg cggagctata ggaaccgcca tacttccagg tatcggaact acagtaggta
     5761 gcgtacttgg tagcttagtt ggcggagcgt ttgggacttg gaagcaacac gattatggag
     5821 tatatttagg tcaaaattta aatgcaaact caaactcaag cttttcttct acagatatcc
     5881 aaaaatacgt tgatagtgag aaaaaaagct ggtttggaag taagagtaaa acagatctta
     5941 gcgccttaga tgacgctgct ttaaaatcca taaatagcgc aatttctaaa gtctcttttt
     6001 tgctaaaaga ttttagtggt ggagagttta atctacctgc tagaaagtac aacaaaaaca
     6061 ccttctacga tgaagcatta ggcggagcga taataagcag cgttactggt aaagagtata
     6121 acaaggcgct tgactttgga aacccaggag agctagaagc catttggaga aactgggaag
     6181 cagtagctaa agacgcctct aagagtgttt ttgaagtgtt aagcgaagct gcagctgaag
     6241 tttctgggac tatgcagact ttaaaaatag ccagttttaa ttcggattta gaaaaattaa
     6301 aataccaaag caattacgcg cttgatagct ttaaagctct aggcgcaggg cttttagaaa
     6361 catctaataa cataaaagac atagcacaaa ttagcgcaga agatataaaa aatgcatatc
     6421 aaaacgctat aaaagcagat tttagcaaag aaacaatatc tgcttttaat gagcttgtta
     6481 atgcttataa tagcgcaact tctgctcaaa aagcttacag tgatgcgctt aaaagctttg
     6541 tagaaactgc atataacgca cttataagca taaagtctgc ttatggagat agcgtagaaa
     6601 ctctaagctt agatgctata agtgcgcaat gggggctact aaatacggaa ttaaaaggac
     6661 tttttcctac tatacaagca gcagcgcaag cttttagaaa tatgagcaat gcagatatgg
     6721 cggagtttct aaaagcagac acagacctaa aaaatagcct aattgctagc actgcaaaat
     6781 atataactta tgcgaacaac gccaatgcca acttgcaaaa agaatttgaa aactataaaa
     6841 ccaccgtagc aaacgctaac gcacagatcc taagattgca aaaagaaaaa gaaaaaagca
     6901 gtcttgaagc aactataaaa aattatgagg ctagtaaggc tatctaccaa aaattaacag
     6961 atatagcatc cgatcttaaa tttaaaattt atgataaagc agagataaac gcagtatata
     7021 gcaattcttt gcaaaaagta aaaagcgatt taacaaatgg cgaatataac agcgcaaact
     7081 tagatgaatt acaaaagtct gcattagcaa aagcagaaaa cctaaaaaat agctctataa
     7141 gtgcagagca ataccgcttt gaagtgctaa aaatggcgaa ccaaatagaa aatatagcgc
     7201 caaaagactt taggcaaagc gtggaagact ccttaaatgc ggcaaataaa cagcttaaaa
     7261 agctagaaga cgcactaggt gaaaatagcg atgcgcaaat aaatgtttta aaagagagca
     7321 taagctctgc aactacgaat tttgcaagtt taatgagcca aaacgctggg ctttttgcaa
     7381 ctctaggtgg aagctttgca gaaaatttta acgccatttt aaaagagttc caaaacgtta
     7441 ataaagctaa ttcaaattta gttttaaaca ccggtcaaat tcaagctcct tctagcagta
     7501 gtagtaaaac agtaactgca aacggcgcag tattaacaaa cccaaaggat tttgaagtaa
     7561 attcctacta ccaacaaatt ttaggcagaa gtgcagaaga cgctggactt cgatactggt
     7621 ccgatagcca tttaaatgga gcggagttaa aagctgctat ggagtacgca gtttggagag
     7681 aaacaggtac gacagacaaa gaaacactaa ggcgtatcca agaaaagcaa ggcttaaaaa
     7741 tgtttgcaga cggcggtata gttactagac caactgcagc tatgatagga gaagctggat
     7801 atccagaagc ggttatccca ttgcaaggtg gtaggggcgt aaaagtggat atggacggcg
     7861 cttttacaga agtagtaagc gaacttaagg cattaaaaga ggagcttaga gccattaagc
     7921 aaaatggagt ctataacaac agatttttaa acgaaaatag tgacggtagc gcacttttag
     7981 taaaggtagt ataaacatga cgatacttga gcctgtagat tttgagctgg tttctagcga
     8041 cgctgcaaat gagaactacg aagagtggag tttaaataaa agcgttatag cagatagctt
     8101 ttacacatat aaaaatcgta tttataaggc agccagtacg tttaatgcag acaaaacccc
     8161 agacgtggat gtacggtttg tagattttgg ggctacgaat aaatataaat ttatagacga
     8221 gtttataaac acgcaaacaa agaataatgg cgctttaaat attgtagtta agccaaaaga
     8281 taacatagat atagcaactt ttttaggatt agaaggagaa aaccttatga tagaagactc
     8341 cgtagtgcca ttgtacttta gaaaaagcag aaattggtgg gagtactttt acgcggctac
     8401 aaaatatcta agcactataa acctccctgt ggatacaaga atgcaagatc ttagttttag
     8461 cataacacct ataaatggtt ttgcaaagct tggaatgctt atgctaggta aaagaaggca
     8521 tatagggcat actctatctg gtgcaaaaag tgggcttgta gattacagca gagtaacaaa
     8581 agacgcgtgg ggcaacgcca ccataatacc agggaaaacc gcaaaaacag cagagtgcag
     8641 cgtcgtgata gaaacacaag atatagacta tataagggac tttgtaagta agttagcagg
     8701 agttcctacc gtttatctgc tcgacgataa cataaacaaa aatataggcg catttactgt
     8761 ctatggaatg cttaaggatt ttagcatttc aacagtgagt caagaaaaat cggaactaaa
     8821 tttattaata gaagggctaa tataatgcaa gttttaacag cgctcccaga gccaccaagt
     8881 agtaaaaaca caacccaatt tgatgccaaa gcagatgcgt ttgtaaatgc cttgccaatt
     8941 tttacgcagc agataaatac gctaagcgca caaatacaag aggagttcca aaccgttgca
     9001 aataacgcta ctgcagtagc tacgcagctg caaaacgtga aagactacgc aaatatttcc
     9061 gctgcaaatt tagcccaaag catagatata agagactctt ttgctttaaa tttagaagag
     9121 ttaaaaagta tagatacgca ttgtaaaaac atagagcaag acttaatgct aaaagaaaaa
     9181 caatatgagc tttttttgca gagcaaagat agctatatgg cagatttaga gtctctaaaa
     9241 accacgtttt tgcaagccat aagcggaacg cagcttagcg catatataac aaaaacagag
     9301 tttgtggatc taacaagagc tatggaggaa aaagtaaata acgctattac agatctagaa
     9361 aacaaaaaca aggtttttat agaaaataat agcaactttt tagcaaaaaa aataatgata
     9421 ggagggatat aaatggaggt tataaaagag ttttataaag gcagtataag cgctacaact
     9481 gatgttttag agccgtctga aaatacacgc tttataagca atatttttat aaaacaaaaa
     9541 agcaatgcag caaaggtatc tataacctta aatgaggaac ccataagcca aaattttatt
     9601 atgcaatatg gtgatgcaaa tatagtggag gcaaatttag tccttgcaaa aggagataag
     9661 ctaggtataa gcgtggataa taagctagaa gatgacttta accaagctct tatgcaaaaa
     9721 cttatagcaa taatggctac aggagaaaaa ttttgcgata taaaaaatgg gtttatgcta
     9781 accactaagc ctgtaataag cggctctaac atggtcaatg agtattgcat ttatgatttt
     9841 aatttaaaac agatatatag tatcaagcta aatatcgata atagtaataa aatatatatg
     9901 ctaaataacg gagttatatt ttatggctct agtaacgtat tttttaactt tttaactaaa
     9961 aaagcagaac agctctctgg catagcgtct ggctctttgt tccgcgtagg agctcacgct
    10021 gctatttata aaaaaacaga taccgcctct tgcgtgtttt taaatagtgg caaactaaaa
    10081 gagattccac ttacacctag ccattataat gtccaagcta tatataataa ttttttgata
    10141 acttacaaga acaatgctaa cgctgtaaat ctagtcacgg gcgctttaat ttctagccaa
    10201 aattcccaaa taatgatgaa tgtgcttaat aatttagtgt atctgcacaa tacctctagc
    10261 tttaacacta aagtttatag tatagacaag tttgagcaga ttattaatgc taaatttgaa
    10321 agcacaggta ttaatgcact ttgcgaatat caagccaccg catctttgcg ctataacgtt
    10381 tgtaacacag gagtagtaag cgtcccaacg tcaaattcta taatttatgg caaagatgga
    10441 gttatagcag agtttagtaa gccaagtggg acgcaaggct ctagcgtagg cgctacagac
    10501 ggaaaactat tttttctacc tctaaataat aataagctag gcgtgtatgc gagcgacgcg
    10561 gagaagatag cggaatttga ttatgatttt gggagcagtc ttactacaac taaagttata
    10621 tctgggaaag acgttatttt ggttcttaca ggaacacaaa acgcgcattt tttgtacgat
    10681 aaaaccctta aaacattaac tccaatagta ctaaatccgg tatatacact aatgggagac
    10741 gacaaaaacg gatatgaaat tttagattct gaaggcaata gccattatta taatttagga
    10801 gataaggagc tatctcaaag agcgcgagga aagccagaag tttttgtaaa aatcgacggt
    10861 gtggaaataa gctaaaaaaa aggaaaaaat atgaaagtaa ataacatagt aagtaataag
    10921 tttgtggatc tagaggggat aaatcacgag caagaataca acaaagatag accagttata
    10981 gtgcaaagtg cgcagataga ctttagcgct ggtaataact ttttagtccc tgctggtgtt
    11041 gggactaatc taagttttag tgctaagaac caggagttat ttaaaaatgt tggtaaaact
    11101 ggatttataa tggtatatac aacggttgcc gggtttagct ctgcttttaa agttataaat
    11161 ccagaatttg ttatagcaag ttctgctact aacatttact cgtattttat aaatcctata
    11221 gatggcaaaa tctgcataaa atgggggggt tataagctaa tatgaaattt caagatgctt
    11281 tattttccga taaaatattc aattttattg atattccggc taatgcatac acaaacaaca
    11341 cgaatttttc agggaagttc gtaccgcagt atgtaagtag cataggagac tatgcgtttt
    11401 atcttaacaa ctttaataca cctttatatt ttccatattg taaaaatata ggagattatg
    11461 cgttttctcg cagggaatat gacagtatta ttaacttaag atttggcgat gtagatacta
    11521 tcggtaaatt tgctttttac ttagatggat acaataaaac ctggggaaat tacagattaa
    11581 gcttcggaaa tgtagggact atagaatcaa acgcttttaa tacggcttat ttaaatacta
    11641 aagttgatgt aactttttgc aatgtaggta ttataaaatc acacgcgttc gccgcaaata
    11701 tgttcacaac tgatgttgat aaagggttta gatttaaaaa tgtagataga atagagtccg
    11761 gagcatttaa tggctttaac ggctcttttc acggcgtcgc cagttttgaa aacgttagag
    11821 ttatagaaaa tggtgctttt aacggacaaa attttagcgt attaaaattg ccagataaat
    11881 ttagaacaag agcggagcta gtccgtatag gcgtgggcaa cccagatatg tttaaaatag
    11941 actaaacaaa aataaaaaag gaaaaaaatg agaatttaca acttagaaac aaaacagata
    12001 gaggacaaag aggtcctaat agacactagc ggtacatttt ttgtagaaaa cttgcaaaaa
    12061 gaaaagctaa aagagcttgg ctatttgcag gttgtggaag agagtttcga caatgagctg
    12121 gagattttag agtataaaga gatagacggg gtctataaag gcgtaaaaaa ggaacgtgag
    12181 gataaagcag atattttaaa atttagggcg tatgagttat ggaaagcaaa tcgtgcaaac
    12241 gctgtagaaa gaatagaagt tacgctaaat aactgcaaac tatatgactc aggtgacgtt
    12301 gatgattctg taatttttca gggcgatgaa actagccaaa accgcatagc aagggcgcta
    12361 agcgtagcta gtagtgcgaa tctaactagc actctttgga ctgctaaaaa taacaaagtt
    12421 tatgagttaa aaatagaaca acttgcgcaa atcttgctaa aagcaggaca agctcaaact
    12481 caaatttgga atacagacag accggagtaa aaaatgcaaa aagaactttt gtttgaaaaa
    12541 tttgaaaacg atatgcgaaa aagaactaga tttatgagat ttttattggc tttggatcaa
    12601 atggctaatg tggtcttttg gaatggaagc caagatgaaa cagtatctag ccatatcggg
    12661 cggcgcatta aggctaacaa agcaactttt tttgataaga aactatgttg ctttctaaaa
    12721 aaacttgaga gaaaccactg tgataacagc ttaggagagt aaaaaaaatg aactatattt
    12781 acactatttt aggagttctt acggtggctc ttttgattta ttttaattca gttataagca
    12841 aacttgagct ggaaaacact agcttaaaaa gcagtctcaa caccgctact ttatcaaacg
    12901 agagctatga aaaaacactc gagattttaa gcagtgatta tcaaaaaggg ttagaagttt
    12961 tagcaaattt aaaacaagaa aaacaaaagg agattaggta tgttacacag gtcaaagagc
    13021 gcattattaa ggataacaac tctacttgca ttgacgctat taacgctatt tatgcaaggc
    13081 tgcacgagca aagagatagt aataagcaag ccattagaga tgccaaaaat tagctttatc
    13141 cctgttatcg cccagattcc attaatggac tttaaccgca ccgcactaac agagcaagaa
    13201 gcagctttaa tggcgtggga tttatacact tatataagag agctagaatt aagcgtgcaa
    13261 agcgtaaagg agatgaaatg agtaactttt acgaagaaat tttaaaactg ctgcttagct
    13321 taacccctgc gctattgtat tttataatgg aggtgcttta atgggagaat ttttagagag
    13381 attgttagac aatttgggag tgtataaata cgtttttatt atagggataa tcggcggagt
    13441 tctaagcgtt tttcaaaaaa agaagctaga tcactgctcc gggagtaaaa aatgtatttt
    13501 tttagggctt attttagata ccacaacagc tctgtttgtg gggtatatag gattcgaaat
    13561 cgcgttttat ttccttggaa agcaaggtat aagcgtaggt cttgcagggc ttagtgcgtg
    13621 ggctggaacg gacgctattg ttgcttggga gaagaagtta atagcgcttt taactaataa
    13681 taaatttgga ggtagggatg gcgaatttta gaaaaagtat ggaaattttg ttgaaattag
    13741 aatttaataa cccacatgac gctttacaca aaaataagac agaaaacggc tttactttta
    13801 tgggaattta ccagggagca cacgctagct ggagcggctg ggatatcgta aaaaacgtcc
    13861 tttctacaaa cgcagatata aaaatagcat ctaaaatttt atatgaaaac aagattttaa
    13921 aaaaaatggt ttttgatttt tacgagcgtg agttttggga taaaatgagg ctaaatggcg
    13981 tagaaagcca gatcatagcc gacgagatat tctgctttgg ggtaaatgca ggggtaaaga
    14041 cagcagctaa gttagcacaa aagctagctg gagtccagcc tgatggtatt ataggcatta
    14101 aaaccttgtc tgctttaaac ctagtcgatg aagataaatt tagtttgcaa tatgacaagt
    14161 tagaaattca gcactacgag agtttagtgg ctaaaaatcc tgcaaacgct gcatatctaa
    14221 atggctggaa aaacagagca aacgcggtgt aatcttagca ccgcgcgcaa aaaaataaca
    14281 aaaaaattta ttctataagg aacattatgc gaagaactac gcttaaagcg ccgtttggtt
    14341 gggttggcgg aaaagcctta ctcgcaaaac ggcgaaaatt atggaatgtg accacgaatt
    14401 tactttttaa attatatcat aaaggatttt aaatgcagtt ttaggactta ttaactcgac
    14461 tatgttgctt tatttggtaa taaagctaaa aaacaaaaca aaatttaaag gatattatag
    14521 gtaggttttt agggattttt agagcagaaa acataaaact gctctaatta aaatctagct
    14581 aaaaaacgaa gatagctcat tttgcgtaaa gctttttaga agtttatata aaacttgtct
    14641 atcttttctc ctcttccagc cttgcagcgt tgggtatggg attttgctta tttcagagag
    14701 cgttttatca ctcacgctat ctttttcttt tgcacagata tctaaaatct cttttgcagt
    14761 aaatttagtt ataaaatcgt atagcttttt tctatgtcct ttcccattat accagttata
    14821 caaggtcgct gttgaaactc ctattacact tgctaattct ttctcgcttg gaggagctat
    14881 tggcgtttta gatccgaaat tctctattaa gaagtctggg tctaaatttt taaaaaaaga
    14941 tatatatctt ttgtgtagcc accagatctt ttccaacttg ctatagtgcc atatggaatt
    15001 ttagttattt tacacaactc tttatctgtt aattttttca tttttttctc ctttttaagt
    15061 attttttaaa aaaatactgt tataatacaa acattgttgc agacaaaaat gtgttgcaat
    15121 tatgtaaaaa atgcaaataa tatcacattt gattgatatt atccttaagt ttgctatcga
    15181 caatttttgt attgaaatta aattaagctt taggataaaa taattttatc tctccatttg
    15241 ctaatgacaa tatttgtgtt gaaacaatag gtttcttttt ttgctagaga gctttttagc
    15301 tctctatttt ccttcttcat tttccaaaaa aatcttaaca ggagttatat ccaccccgcc
    15361 tttttccagc aaaaccaaag agtcttctaa tagttttaat cctcttgtcc tataaccaat
    15421 ggactgtttc tccagaattt ctattttaaa atcttcattt tcttcgagcg ctaaagattt
    15481 tgggaaattc tttattttaa agatagcgcc cttatctact acagagtagg aatttggagc
    15541 atttccatct ccgcttattg ttccatctat taaaaatacg ttttcaccca cccgagaagt
    15601 agtgttcttc ccaaagctgc tacatagtat aaatccacct aaacaaacag cagatttata
    15661 gctttttacc tcttttaaag cagtaactct cacatcagcc acatcgtttg tgtggatgta
    15721 tccatagtgc ttttttaagc aatttaagat cccctctaag atatcatcgt catcttcaaa
    15781 ttcccattta ccagttgcgt catttacaac tccacccaga ttgctaaacc atttccaagc
    15841 ccttgctcct tttggggctt gtacagttat cttgtcattt tcttttacaa cattaacttt
    15901 catatacttt ctcctctagt ttgttttaat catagatttc taggagttcc tggttacttt
    15961 taagaaggtc atttaactca gcgatgtatt cccaccctat atctgggtgg taatctgctc
    16021 catacttaaa aatcttatct cgcagagatt ttacttgctc ttttagcacc cttctttagt
    16081 aaatgcataa ggttgttggt caaattttgt tattgttata aaccttggtt tataatagcg
    16141 gtatgtagct ggatctctaa actttataaa ttctaaatct acaggcacaa caggcttatt
    16201 tggcaaagtt agattatatt tatcctctat aaattcttca tcttcaagtt tgtagtcatg
    16261 ggtgccaaaa aggaaataat ggttgtcccc cactttttcc cactctaaat cctctttaaa
    16321 ctccggacgg tcctttcttc ttactagctg cttaccactt aagtaggctt ttagtacttt
    16381 tataattttg gctgcgtctt ctttttcgcg ttttctgaaa tagttttccc tgtgctcatc
    16441 tgttatttta tactctaccc ccgagtaaaa aaattctact atatcactgc agactttcca
    16501 ctctactttg tcttgtttgc catttctcca aaagccccag gtaagccaat atactaattt
    16561 attatctaaa aaagcctcca aagccgaaat ccaggcttcc attcttgcag ggtcttttct
    16621 aagttcatcc atatgtgcag atattagctt gtttttcgct ttatcgcttt gctcaatctc
    16681 gcatctaatg cgccactgcg aactgtttat aagttcgtgc aacagggcac tactacccca
    16741 cattttcctt atgtttttta tcgacttctc cattttgtta tctctctttt ttgctattaa
    16801 tttgcgttta aaatcgaact atttttttgt tttttaaaaa agtagttcga ttttaagcta
    16861 aaagtagttc gattttaaaa aaatatccac aaatgcaagc tcggctaatc aaatttttga
    16921 tgaattacac ataccaaaac aagcgtggga aatgtatccg tacgaactta gccgagggat
    16981 cgctagcaga gttcaaatcg ctctaaattt agcattagat gccaaaatac ttctacttga
    17041 tgaagttacc agctcgcttg atgaaacaaa tacaaacaga gttatagaaa tacttttaag
    17101 actaaatata caaaaagtag tcataactca cgatgaaaat ttagcattta cactatgcga
    17161 tgaagtactg gttttagaag acggacgtat gacgtatttc ggagataaaa taggatattt
    17221 ttcatgagct tagaaattat aaatttaaaa aaatcatatg gtaaaactga agttttaaaa
    17281 gatatcagct tttatctaaa aagcggagaa agcgtagctc ttatgggggc tagcggaagc
    17341 ggaaaaagta cacttgcaaa atgcatagct aggctagaga gtatcaacag aggaagcata
    17401 atttataaca gaaaggatat attaaattta aaaaatgcag agttcagaca aaatattcaa
    17461 tacgtatttc aagatcagct aaccgcacta aatccatcaa agcgcgtaaa agatctatta
    17521 ataagcgttt taaaacgttt taagatagat aaaaaagatg aatttgagca tattttaagt
    17581 gacgcaaagc tgccttattc tattttagat agatttccaa aagagcttag cggaggtgag
    17641 agacaaaggc ttggtatcgc tagagctatg ctgataaaac caaaaattct gatcttagat
    17701 gaagtcacaa gcgcgctcga taagagacta aaaagcgaga taatgcatac tcttatgcac
    17761 tataaaactc ttcataaaac cgcaatgata tttataacgc atgataaatt tatagcaaaa
    17821 gagtattttg atagaatact tatgcttgag tgcggcagat tgattttcga taaaactagc
    17881 taacccagat atatatgcta attaaaacaa caaaaagcac tggaggagtt atcataaaac
    17941 taaatttaaa aaagcttttt atacttatac gaataccgtt tttttgcagt ataaaaagcc
    18001 aaagcaatgt agccaaagag ccaaacggag ttagttttac tcctacattc gagcctatta
    18061 tatttgcata aatcgcagcc ttactcgata taccatcaag agaaatatcc attatcatga
    18121 tagccggtaa attattcata acagcgctta aaatagccga aagaaatcca ctagccatca
    18181 caaaagaaaa ttccccaaat gagctaaaat aaactaaaat acccctaaca aattccaaca
    18241 atcctgcatt tttaagtcca aaaacaacaa catacaaacc tatactaaac cacactatct
    18301 gccaaggagc agtttttagt agatcttttg cacttaccac ttttgatttt gccgctacgc
    18361 ataaaaatat aatagctcct ccaagagcaa acaaactcac cggaagtcct aaaaaatctc
    18421 ctaaaaaata accacataaa agcataatta aaaatatcca gctaaactta aaaagtttaa
    18481 cgctttttat agctgttttt ggttctttta ataggcttgc gtttacactt ttcggtatat
    18541 ctcgcctaaa aatcagccat aaaaacaaag tagaagttat aacactagca ataaatgcaa
    18601 aactcatatc atacatatat gctgaaaagc tgattttata gtagtttgcc gtaattatat
    18661 ttgttaaatt tgaaaagaca aaaggaagag aagctgcgtc gctgataaat ccacctgata
    18721 acaaaaacgc ggttatggtt tttaaattta gttttaaaat tttcattttg gcaagtatta
    18781 taggtgttaa aataagcgca gcagcgtcat ttgcaaatag agccgaaaca aaagctccga
    18841 gcaaaatcaa gtaaataaac atctttttcg cactattttt agcaagtttt gcaacaaaaa
    18901 gagcactcca ctcaaaaaaa cctatcttat caagaaccat tgaaaataaa attattccga
    18961 taaacgttaa agtcgcgtcc caaactatgc ttacgacttc taaaatatca tcaacactaa
    19021 ccacattaaa catataagcc atagcagctc ctaaaacggc tgaagtgccg attccaaaac
    19081 cttttggctg ccatataact aaaaccatag tgattaaaaa tataaaagcg gctataagca
    19141 tttatctgcc tttaaaaatt ttaaaatagc tatgctagca aaaaatagcc aagactaagt
    19201 ttaactaaga ttttagataa atttaattat aatatttaac taaaataact ccgaaggcga
    19261 aaaatgaagg tttctattaa agaagcagct gaaattttgg gtatcacaaa agaggccgtt
    19321 tataatagaa ttcgtagaaa ctctttaaaa agcgaagaga ttaacggagt taaatatgtt
    19381 attttagatg ataaaacagt aaagaaacct tctaacaaaa ctataaaaac gaaaaatcaa
    19441 gatgaattca caaatttttt actctctcaa atcgaaaacc tcaaagagat aaataagcgg
    19501 ttatctgcgg ataaagatag aatttttaaa gaaaaagagc agcttttact agccaaaaat
    19561 gaagagataa aagagatcta taaaaacagc gacgaaagac taaaaagatt tttgcaaatg
    19621 ttagaaaact cattaaattt accttcgcaa acgcaaaaac cattagcaat agatgtagaa
    19681 tacgaagaga taaaagataa aaattggata actttgagtg attttttatt aaatttaaaa
    19741 ataaaaccta aaaagttaaa aaaacttcaa aattatctgc taaaatgtgt gaaaaaaggc
    19801 aaactttcaa agctagaaaa tggagttata tatataaaag ccggacttag ttatgaaaaa
    19861 gtaaaggaga aaatgtgaaa catataaaaa cattaaaaga gataagcaaa atcagcggcg
    19921 ttggagctat acttatattt ggtttagcgg catgcggaaa taccgaacaa agcagtggag
    19981 gttcggcagt gcaagaagct agccaaaaac aaggcgcaac agtatttatc gaaaaaaata
    20041 gcgatggaag ctataaaata gcagacgaat tcccaagcaa tgaaacaaga gtatttttaa
    20101 gagagccggg tgccgacgga gctataagcg aaagactttt aagccaaagc gaactcgata
    20161 agcttatgca agaagaaaat gccaaaatag atgccggaac tagcggacta acaaatcaaa
    20221 acgctagtgt aagcggaggc ggtatgagcc ttggagaaac tattttagct agtgcggctg
    20281 gcgcaatcat aggaagctgg ataggaagta agctatttaa ctcacctggc tatcaaaatc
    20341 agcgtcaagg cgcgtataaa aatccatcag cttataacag aagcgtaaac agcttcaata
    20401 aagccggcac tgcagcagct agccccaaag caaacgccgg taaaagtgga tttttcggag
    20461 gaaataaagc agcaactagc agttcaactt ctacaacgag cggcggctga tatttgtgat
    20521 ttaaatttgg cttagaattt gcttgatatt ctcaaaattt aaaggagaaa atatgcaagc
    20581 cgtaaatgag ttgaaatcta tttttaatag ctatataaac ataactaata aatttaacaa
    20641 agatgatagc ttttctaaac tcttagatga aagttctgcg aaacttgatg aacttgaaaa
    20701 caagatgaat gagctaaaaa gtatagcaaa aaacgatgaa gagatgttta aggtttttga
    20761 ttttatgcag attatgactc aacttatgta tggaaatgtt gacgagaaag agcgcgataa
    20821 actccttagc aaagctgcaa aaatcagtaa tagtttataa aataattaag ggatattatg
    20881 aatttaaaaa gtataaaagc attagataat gagtatttag aaagtatcgg ctttagctgg
    20941 catacagatc cagacaacac tccatacgta gcagatgagt tagtagtcgt gagtcaagat
    21001 gagtgcgaag catactataa agctgcaaat gagttatatg atatgtatgt aacagcagct
    21061 caatatgtta tcgataacaa tctttttcac gagctaggaa ttccttttaa tcttatcgat
    21121 acgataaaac atagttggga aaatgatgtg cattggcatc tttatgggag atttgatctt
    21181 gccggaggac ttgacggcaa acagataaaa ctcattgagt ttaacgcaga tacgccaact
    21241 agcctgtttg aaacagctat agtccagtgg gctatgctta agtttaacgg tatggatgaa
    21301 gaggcgcagt ttaatgatct atacgatagc ttagtagaga attttcgcag gctaataact
    21361 cttgaagaag atactagtaa atttgacgag tattatgaag gatgggggat attatttagt
    21421 tcaatagcaa acaacataga agatgaaaat acaacaagac ttttacaaag cgcggctata
    21481 gacgcaggat ttaaaaccga atttgccttt gctaatcaag tagatttcag tgatgaaaac
    21541 ggaatttctt acaatgggga aaattacgaa tattggttca aactaatccc atgggaaaat
    21601 atcgcggtag aagaaggtga gttagcactt atcttaaaaa atattatcga aaatcaaaaa
    21661 gcaattatcc taaatccagc atatacgctt ttatttcaaa gcaaaggcat catgaaaata
    21721 ctttgggatc tatacccaaa tcacccgctt ttattagaaa gtagttttga accgttaaaa
    21781 ggcaaaaaac aggtcaaaaa accgttttta gccagagaag gagcaaatat aagcattata
    21841 aatgaaaacg gcgaaactga gcttgaaaca gacggagaat atgcaaacgg aaagttttta
    21901 tatcaagaat ttgcagattt taataaagat agtaaagaaa atagctatca agccggacta
    21961 ttttttgcat ttgaaggttc ggcacttgga tttagaaaag gtggattagt gcttgataac
    22021 tactctaaat ttgtaggaca cgtgataaaa tagtgaaaac tttagtagct ataagcggtg
    22081 ctagcggtgc tcatctagga atcaaactag caaatgctat tgctagtttg gaaaatgata
    22141 cgcatatgat tatcagcgaa aatgcgttga tctctatgca aaaagaggga tttaacgaaa
    22201 aagtcgataa aaatatacga atttattcaa ataatgaaat ttgggctgct ccggctagtg
    22261 gttcgtctaa atttgaaaat atgataatcg caccttgctc cataaactct ttagccaaaa
    22321 tagcttctag catcagtgat aatctgattt taagagcagc tgcagttatg ataaaagagc
    22381 ataaaaaact tattttaggc gtaagagaaa tgcctttatc tgctatcagt cttagacaaa
    22441 tggcggattt agcaacactt ggagttatca tagcgccgcc tattataggg tattattccg
    22501 agataaaaag tcttaaagat atggaaaact tcgtgatagg aaagtggcta gatactcttg
    22561 aaataaaaca cgatattttc agtcgctgga agtgatccgt atcaaaatgt tactataatt
    22621 tcatgttatg gataaaattt ttataaacaa ttatagttat aagagttttt tgatataatt
    22681 gtgatagaaa caaaaaaagg ataaaatatg aaaatagtat gcttagatgc cgacacgctt
    22741 ggaaacgata ttgatttaaa atctgtattt agtgagtttg gggagtttat cagctatcct
    22801 aaaactgcac caaatgagac cataaacaga ttaaaagatg ccgatatagt acttacaaat
    22861 aaagttttaa tcacgcaaga agttataaat tctttaaatt taaaactcat ctgcgtaact
    22921 gcaaccggag taaataatgt agatcttgac gctgcggcta aagcaggaat agccgttaaa
    22981 aatgttgctg gctactctac aaatagcgtt gtacagcaga cttttgcaaa tcttttatca
    23041 ataactaatc aaacaaagta ttacgacagc tactgcaaag atagagtcgg ctgggctaaa
    23101 agccctattt tcgtgcattt aaatgatcct atttatgagt taagcggaaa aaaattcaca
    23161 gttgttggat taggaaccat cggaactaaa gtagcaagag tagcaaagtc ttttggctgc
    23221 atagtttctt actactcaac aagcggtaaa aacagtagta atgagtttca aaaagttagt
    23281 tttgatgagt tactaaaatc agatatcatc agcatacacg cacctctaaa tgcaaataca
    23341 aaaaacctat ttgatgaaaa agtgctttca aatttaaaag acggtgctat aatcgtaaat
    23401 tcgggtagag gcggaatagt cgatgaaaac gccgttgcaa aattagttga tgaaaaaaat
    23461 atctactttg caaccgatgt tttagaaact gagcctatga gagaagatca tccgttttta
    23521 aacgtaaaaa acaaaaatag actcctcatc actccgcaca ttgcatgggc aagcgtagaa
    23581 gctagaaaat gccttgtgga gctagtagca aaaaatatta gagattttat aaaaggataa
    23641 aaatggctga tgaacatagc tttgatataa gcgcaagcgt agatattatg gaggtcaaaa
    23701 atgctcttga aacagcgaaa aaagaagttt caagccgttt tgactttaaa ggcttaaaag
    23761 cccaaataga gctaaacgaa aaagaaaaaa ctataactct tattagctca agcgatagca
    23821 aaatagatgc tttaaaagat atagttttga gcaaactaat aaaaagagag attcctcctg
    23881 ttgctataac cgagttaaaa agagagagcg caggcggtgc aaataccaaa tgcagtttaa
    23941 aactaaacga tactttagat agcttaaatg caaaaaaaat cacaaaagtt ataaaagatg
    24001 aaaaactcaa ggtaaatgca agtataagag gtgaagaagt aagagttact agcaaatcta
    24061 tcgatgagct tcaaaatgtt ataaagcttg taaaagattt aaatttagag cttccgctaa
    24121 gttttaaaaa tttaaaataa aggataaaaa tgggtttcga atttaaaaaa acagtactaa
    24181 ttggagcatt ggcgatatct acttttttaa gtgcggctac agaaggaacc gaatatataa
    24241 aactaaccaa agctcaacaa attccaaacg cagacgataa aataatagaa ttattaagtt
    24301 acggctgtat ccactgctat aaccacttta aaaatggaac tttaaaattt gtttccgagt
    24361 tttttccgga gtttaaatac gaagagtggc aagtaaaaca gatgggcgag tacggttacc
    24421 aaatggctga agtattagca tatgcaaaaa tgctagacgg aaaaagcggt ataaactctt
    24481 taagcgttaa atcatcgttc catcaaattt taaaagcgta ttttgaagca aatttcaaac
    24541 aaagaaaaag atataacgat gcaaatgcat tttatcaagt tgccatagac gtattaaaaa
    24601 atcaactaaa taaagatgta agcgtgcaag atatcataga ttatgccaaa agcgacgccg
    24661 gcaaaaaaca gatacaaaga tttgacgatg gatttgaagt agcaaaatta aatggaactc
    24721 cagcttttat catcaaagga aaatatctga taaatttaga aaagataggc agcgcagaag
    24781 agctagtaga agtgattagc gagatagtta aactggatta actggaattt tacttaaatt
    24841 taaatattaa ttttatattt attatgttat aatctacgct aatttttatt agcaaggatt
    24901 ataatattat gactttttca aacatagccc agaatcttgc tataaagtac gcggatttta
    24961 aaatgcaaag atcgctgtat aatgggctaa atattgatat attacaaaat aatctgccaa
    25021 aaatagcaga cacaaacaaa acatatatgc tctacgcaca tgtgcctttt tgccatacat
    25081 tttgtccgtt ttgctcgttt cataaatatg attatgatga gagtgcggct aaaaaatatt
    25141 tttacagctt gagacttgaa atggaacaga tcaaagaagc aggatttgac tttcattcta
    25201 tgtatgttgg tggcggaacg actcttataa atgaaaatga gctcttaaaa acgcttgaac
    25261 acgcaaaaaa actatttaat ataaacgaaa tttcttgcga aacagatcca aatcatatag
    25321 aacctaacaa tctaaaatgc ttttcgggac ttattgatag gcttagtata ggagtacaaa
    25381 gttttaacga tgaaatacta aaaaaagtag ccagatattc taaattcggc tcaaaagatt
    25441 tacttataga aaaattatca aaagcagtcg gcatacttcc tattacaagc atagatctga
    25501 tatttaactt tccgtttcaa actaaagacg aactacttta tgatatacaa acagcaaccg
    25561 ccatagatag cgagcaagtt acattttatc cgcttatgaa atcaaatata acaaaagata
    25621 agatcgcagc tagtttaggt cacagcagca aagataatga acgtgaattt tacgagataa
    25681 tatgttctaa atttaaaaat tactatcaaa ataatgcttg gtcgttttct aaacaaagct
    25741 cgaatttaaa agatgaatat gtcggtacgg gcaaccagta cgtaggagta ggaagcggtg
    25801 cttttagttt tttaaacggc gaacttctta taaatgcttt taatcttgat gagtatagcg
    25861 aacgcgtaaa tgcctacaga agtgctatta tagcaaaatg caaatttaaa aaaagagata
    25921 aaataagata tctcttttta acgcagttat ttgatggaaa gataaatatt gataaattta
    25981 accgcgaaaa cgaagtaaat ttaaaacttg atttatactt agaaataaca cttttaaaaa
    26041 ctacaaatgc catcaaaata atagacaaag agataatttt aactgatttc ggaagatatt
    26101 tatgcgtagt gctgatgaaa gagttttaca tcggtatgga caaagtaaga gctactttta
    26161 gagacgatgc taagataaaa tataaaaaac gtttaagaat tatggataaa ttataaattt
    26221 aaagtagagc aattaaaatt tgaaaaatct tttgaaagct attttttcca aatttaaaca
    26281 catacgcaaa agtagttaaa ttcagatgga caaaatatag tattaattaa atttatatta
    26341 cttattttgt ccgcaataca atataataaa tttataaaag ccctactctt ttatcctcat
    26401 caaacgcgga actaatctct cgttttatct cattttcaaa tatcttcata gtaaaaattc
    26461 catcttcgct gatagctgtt ttaagtgcgg cgtttttaag cacaagcatt atctgggcgc
    26521 cgctaagtgc atgtttagca agcttttcta tgctaaatcc gctttcaaaa ctaccatttt
    26581 gcggaagcac tcttttccaa atttcgagtc tagctttaaa atcaggcttt ttaaactcaa
    26641 ttttataatc aaatctcctt gaaaaagcgt gatccagact ctgcataaaa tttgtagtag
    26701 ctataagaac gccttcaaat ttttcaatct gctctagaaa tatattttgc atttgattgt
    26761 gcatcttatc gcttccagag ctagtttcta tacgagtaga aagaaactga tcggcttcat
    26821 ttagcaacaa aacaggttct gttttagtct ttgagcaaat ttccttatac gtatcaaata
    26881 tctttcgtac gttttgctca ctctcgccga cgtatttact caaaatctta gaacaatcaa
    26941 agcttagaat ttgtttttta aggcttttag caagacttaa cgcactcatc gtctttccgg
    27001 tgcccggact tccgtaaaaa atcactttca cttgagcgct ttttcttgat ttgatgcccc
    27061 aggtatttag tctagttagt acttttttat ctacttgttt taatatatca tccaaaagct
    27121 ctttagtttg ctcatttaaa acaacgtcgt tcaagtcgct atttggctct ataagttcaa
    27181 atatgtcact ctctttaacc agagtctcta gttttaattt ttttgttttt ttggaatttt
    27241 gagggtgcat tataagctgc aaaatctctt cagtaataaa aaaactcctg cttacgctgc
    27301 caaacgcatt taatacctca tcataatcta taagtccact ttcaagcaaa tttgatccat
    27361 cttcaagcaa gcttctgctt ttcattcgct ccatatcgtc tttgctaact aaacttataa
    27421 gagtatttaa atcgcgcaaa gcctcaaatt ctccgctata ttcctctttt aaaagcgcta
    27481 gaaagatgac ctgctctttt gaatttaagc tgttttcttt aaatatttgc tcacaggcta
    27541 atggaatttt gcttatttta aggcgatgct ctatgagatt ttcggtgatg gctatctttt
    27601 tatcaagctt tgcttttgag ttttgactat gattgctaac ctttttttgg tatagttcaa
    27661 ttcttaaaaa ctgatccttc aaatattcca aatgatcgtt ataaggctca tttggtggca
    27721 cttgactagt agctttacca tcttcaagca atactaaaaa tagctcgctt aactcaactt
    27781 cggtgtataa catactaagt ctgcttgatt tttgttttgc gttttcttta aaaaatgaaa
    27841 agttttgtga gatatatccc aaatcaatta gattttttaa atttgaaata taatccaaat
    27901 atccaaaatc cttatctgta aaaaccgtat ttaacagatc aaaaacactc atctggctaa
    27961 cgccttgtat aaaacttctc gtcatgtatt tcaaaatttc tagctcgtcc ttatcgcatt
    28021 ctagaatttg aaatatctct gagcttcgat tatcgtttaa aaaatctttt aaatacttca
    28081 acctaattta tcctttactt tatcttttaa gacgcgctta agtacttttc cggcagcgtt
    28141 ctttggaagt tcatctgcaa aatatatatg ttttggtatt ttaaaatttg ctaaatgttt
    28201 ctttaaaaac tcttttatct ttatggcttc tatatttata ccatctttta actgcacaaa
    28261 agctactaca tcttcatctt cgctctcatc ttttatacct ataacggcgc aagcttctat
    28321 ctcttctaat ctataaatta tctcttctat ctctcttgga tagatatttt gtccttttga
    28381 tatgataaga tcttttaacc tatcgactat atataaaaat ccatcttcat cgatttttcc
    28441 aagatctccg gttcttaacc agccgtttat tatggtatca tctgtagcgc ctggattatt
    28501 tagatatcct tgcataacgt tatcaccttt tacgattatc tcgccaactt cgccaatatt
    28561 tttttccatc atttcatcat ctacgatttt tacgttgtac tccgcaagag gaagtccgac
    28621 gcttgaaatt tttttatgtt caggacgatt tacgctcact aaaggactgc actcgctaag
    28681 cccataacct tctaaaagct gagcgcgcgg aaaaattttt gcaaaatcat caatagtctg
    28741 ttttgcaaga ggtgctgagc cgcacacaaa atatctaata gagttaaacc acttaaaata
    28801 ccaaggaatt ttagcttttg ccatagccgc gtatatagca ggcactccta aaaatacgct
    28861 tacacgtttt aacagcgtct gttttagtac atttgaaaac ggaaataccg actttactat
    28921 cacagcagcg cttgcgctaa atagtggcaa aagtaccatc acagtaagag taaaactatg
    28981 aaacatcggc aaatacacga taaatctatc tttgttggtg atcgtaaaaa ttctatttat
    29041 accaactaaa tttgaaaaaa catttttgta gcttataacc gcaccttttg gatgacctgt
    29101 tgttcctgaa gtatatataa tactagatat atcgtctata ctcacgtttt gattaatttt
    29161 gcatggcgaa aactcttcat ataaataaaa tgaagtgtat ttgtcattag gtttttcata
    29221 ttcgccgata actgctatct tacgtaaatt tgttttacgt tctaaaccta aaatttcttc
    29281 taaatgcgaa tttgatacga taagcatttt tgcgtcacaa tcatttaaaa tatactcaaa
    29341 ctcatttttc tttaaaaatg tatttatcgg tacagccact gcgcctatag atgttattgc
    29401 taaaaatgct actataaatt cgggtgaatt tgtaactatc atggcgactt tatctgagta
    29461 agatatcgag ttactttgca aaaaagccgc acacatatcg actttgtttc tcaactcttc
    29521 ataactaatc ttctttttat cgtcaaatat agctatactt tttggatgct cgttcgctga
    29581 gcttataagc atctcataat aattattaaa tttgtattcc atgattaaaa cctatatttt
    29641 ataccgaaat ttagaatctg cgcatctccg tttgccatct ctcccactat attattaaaa
    29701 gaagcgacgt tatcttcttt atttatatgt ctatcttttc tttgctgata caagtagccg
    29761 attgcgaact caagatcgtc tctaaattta taattaatac caagtgaata tatatatgct
    29821 ctagtatcag gtaattcaaa acctatataa tttacattgc taggactctc atcatatgca
    29881 aaaccgctca taagtcttaa tttatcattt acatcccata ctataccaaa tctatatgtg
    29941 tttgaatctt tccatttttt ctctactgga tgatcaaaaa cttcctcaga aggaactcta
    30001 gttgcataat taaaattaaa acttaccaac tccgaccaaa aacttctctc caaggcggcc
    30061 agaaaagtta catctttgac tttgtaagcc atagccaaat ttagggcagc aggcagagga
    30121 attttcacat cgacagagcc gttataaaat ccgttaaatc cggctaaagc ggataaatta
    30181 ggagtagttt tcgaaactat attcgcatcg ccttttaaat ccagattgac tttcgatcta
    30241 taagtagcag caaaacttaa atttgaaaat ggtctataag tagcagcaac gttccatcca
    30301 aagcttaaat cattgccgtc tatatgtcta tttgcttcta gcaaaaacga attagatacc
    30361 attccataag gatttgtatc taccttgcca taagagtaaa tagcccttgc tccggctcct
    30421 atactaatct tgtcattcac tctataagct acgctaggat ttatctcaaa tactctaaga
    30481 gaaaataatc tagccgtaga agccggatat ttatccaccc atctcatatc aagtcccgat
    30541 ggaacggcaa agcttaatcc aaaacgccaa tttggtatgt attctggaga tataaagtta
    30601 aaagtaggta ttaaaaaatc tgcattttta gatgagacgg cgtaattgtg tgcatttgga
    30661 aattgtggat taaacgtgct tgagccaaga tgtatatatg aaaatgaatt ttcaaaatag
    30721 tgtctactat cttcaaaata catcatattt gcaggattgt aataagctgc gtcagggcca
    30781 aaactataag ctatgtttga cgcacttaaa gctacggcgt cgctactttg ttctggtatt
    30841 ttatagccag cagcatttgc taaacttgca cagcttgcaa gcaacaaagc tctttttaaa
    30901 tttatcatca atttcctttt attaaatttc taagagctat gatctcgtca gcccatatac
    30961 tattatctat cgtttctaaa ataagaggta tctcatctat ccttttgtca ttcataatat
    31021 tttcaaatcc actccagcct atacagcctt ttccaaggct ttcatgacga tctttgcggc
    31081 ttgctaaatc gcatttgcta tcatttaaat gcataccgct aagaaactca aatccaacta
    31141 ttttaccaaa atcgtccatg gttttttcat aagcgctctt gcttctgata tcatatccgc
    31201 tacaaaataa atggcaagta tcaatacaaa ctccgatgcg atttttatcg caactgtttt
    31261 ttaccaagta gcctagatgc tcaaatttaa aacccatatt gctgccttga ccggccgtat
    31321 tttctataac taatttaatg ccgcttgagt tttctagtat ataatttatc gaactagata
    31381 tatttgaaag gcagatgttt tcatcaatct cttttagatg tgatcctgga tgaaaattta
    31441 tcatctttaa atcaagcaaa tcgcatctat aaatttcatc taaaaaagca tctatgcttt
    31501 ttttcctttg ctgcggatct ggatgaccta aatttataag atagctattg tgaggtagta
    31561 tatgctctaa agatatattt gcatttttta aattcgtttt aaaagaggat atttctgatt
    31621 tagtaagtgg ttttgcgctc cattgtcttt gatttttgac aaataaagca aatgcgtccg
    31681 ctccgatact tttagcattt aatggagcat tgcttactcc accactagca cttacgtgcg
    31741 ctcctatgta tttcaatcaa tctctttcat gataattttt atgtcgtttt tttgatcgac
    31801 aaaactcatt ttgccgtcac aaactttgta ttctactgaa attttactta ttatttgctc
    31861 aaatccacag atagtagtta ctaaatcagc tccgaaatag atcggatttt gatttaaaat
    31921 atcttctaaa agtccggcgt aatgagagct taaaaagaat ttctgattaa aaaccagttt
    31981 atcgtcgcaa gcaccgttta cgcaaatttg atcttttatg cgaagatcca atatactttt
    32041 tccgcttgcg tatatttgta aattcgtata atttttataa aaatgtataa atccagcgtc
    32101 gtttattttg agatttttcg actttataag cagagttatg ctttttgagc gttcactact
    32161 aagagtcgca catccgctca aaacagagat ataaaaaacg agtaaaagca acccataagt
    32221 tctaaacaaa acttttcctt ttaaaattag atta
//
LOCUS       DAPPKW010000010        29247 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.010, whole genome shotgun sequence.
ACCESSION   DAPPKW010000010 DAPPKW010000000
VERSION     DAPPKW010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 29247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29247
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.010"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..1058)
                     /locus_tag="RPW04_000438"
     CDS             complement(<1..1058)
                     /locus_tag="RPW04_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YedE-related selenium metabolism membrane
                     protein"
                     /protein_id="HDX6294557.1"
                     /translation="MNTKWFIVSGGVLGVLAALLVQAGNPGNMGICAACFLRDSAGAL
                     GFHKVEALQYLRPEILGLIIGGFLASLFWTKEFAPKSSPAAFSNFFLGVFAMIGALVF
                     LGCPWRAFLRLDGGDMTAIAGFLGLGVGVGVGMFFKSKGYKTEKSVAVSKNLGILPVI
                     FSVILLLALVFGLKAGNGALFTSIKGPASEHAAIAVSLIAGVLVGVFMHKSKFCSVGA
                     FSKAFRGDFSMFWGVISIIVFASITNLALGQYKFGFEAQPIAHNDFIWNFLGMVLAGL
                     CFSLSEGCPGKHLVQMGTGNLGSAIFVIGMMAGAGFAHNFLLASSGAGITAYAPYAVG
                     LGFIFAIYLGLFNKKSTI"
     gene            complement(1330..1809)
                     /locus_tag="RPW04_000439"
     CDS             complement(1330..1809)
                     /locus_tag="RPW04_000439"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294558.1"
                     /translation="MKNIFLICMILVGLTSFAYAKNSVTATFIGKNSSLSLELSGINI
                     NYNFVGNPAIPDSNSDGILSKYAKSLSFSVNSQESNAKELLKLISKNDKVDLVIKTEV
                     NGISSTYKIKDIKAYDFSAAYSNYEDYENNTTSPLSSNIYFSFYYENLELDGVNLVK"
     gene            complement(1824..2270)
                     /locus_tag="RPW04_000440"
     CDS             complement(1824..2270)
                     /locus_tag="RPW04_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HDX6294559.1"
                     /translation="MNSDIELFSGSLNVTEITNRWYDNSKNLNYGAIITFVGVVRDED
                     GIDGLSFDIYEPLLKKWFDVWQKKAKEKNTTIFMAHSKGDVPNHTSSFIAGVLSPKRK
                     AALTIINEFVEDFKANAPIWKYDLKNKQRIYAKDRSQKLAGAGILS"
     gene            complement(2272..2493)
                     /locus_tag="RPW04_000441"
     CDS             complement(2272..2493)
                     /locus_tag="RPW04_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HDX6294560.1"
                     /translation="MVKVEFLGPINKESLEIKAASLGELKTILNQDESLKEWLNLSAV
                     ALNDEIVTSLDTKLKSGDKICILPPVCGG"
     gene            complement(2531..3844)
                     /locus_tag="RPW04_000442"
     CDS             complement(2531..3844)
                     /locus_tag="RPW04_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF814 domain-containing protein"
                     /protein_id="HDX6294561.1"
                     /translation="MKYKVLTQIPEFLSKFKKITNIKRVDDCALEIVFDGNYPLVFDL
                     NKSNSSIYKTDEKIAVKEYKAPFDITLKKRLNSAKIDFVEALKNNRILKIKTTLNGSY
                     KAISSILYLEFTGRFTNIILTDENDIILEALRHMENEKRTIKVGKKLTILEPFDIKES
                     ECEQITNFDEYFKMEFLRLKTKKLDEIKQVKLLNLDKKITNLNANLSELPSKEELETQ
                     SHKLNKNANLIIANLYLLNDYERELKLADENGAIINLKLENSPKNSANEMFKESKKLK
                     QKAANISLQVLNLKEKIEFLNKLKNIISLSKSTSEISILSPKKSQTKSNTKLSDLIEN
                     FYVGEFKISVGKSEKGNEFLLKNAKKDDFWFHLKDRPSTHVVVKTNKRTLSEDIINFA
                     AKLCVSFSTTQSGNYLIDYTKKQNVKVVNGAFVNYVNYKTIGIQI"
     gene            3901..5166
                     /gene="leuC"
                     /locus_tag="RPW04_000443"
     CDS             3901..5166
                     /gene="leuC"
                     /locus_tag="RPW04_000443"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011992759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDX6294562.1"
                     /translation="MKQTITEKIFSEHVQHAVYAGQIVETKIDMVIGNDITTPISIRA
                     FKESGAKKLANPDGFAIVMDHYIPAKDIASANQAKISRDFAYEHDLKNFFDEKDMGIE
                     HALMPEKGLVVPGDVIIGADSHTCTHGALGAFSTGMGSTDLAYAMITGKNWFKVPATI
                     KVEFVGKPAKHIYGKDLILEVIRQIGVDGALYKALEFCGDAMKYLDMDSRFSLCNMAI
                     EAGGKSGIIAVDDITKEFLESKNLRSKPKFHYSDEGANYEQVLRIDVSKLDPVIAYPF
                     LPSNGKSINEALKDDLKIDQVFIGSCTNGRLSDLRIAARILKGKRVAKHTRLIITPAT
                     QKIALAAQKEGLMDIFVEAGAVVSNPTCGACLGGYMGILGAGERCVSTTNRNFVGRMG
                     DRTSEVYLANSAVAAASAIAGKIADPRVL"
     gene            5178..5720
                     /locus_tag="RPW04_000444"
     CDS             5178..5720
                     /locus_tag="RPW04_000444"
                     /inference="COORDINATES: protein motif:HMM:NF024214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HDX6294563.1"
                     /translation="MKNALILAGGKSSRMGSDKTLLAYKDYPSITHFLFERLSKIFKD
                     VKISAKNDKFEPKLPVLVDDFDDFSALKVIANLDKNYNEPVFIIAADTPFVKFETIKE
                     LYLNLKNNDISLPKGGEFVHGLCGFYNPKVSLAAQSLLKNGMQKIALLRDLCPTVITE
                     FKDKKQFLNLNTQAEYELIK"
     gene            5717..6739
                     /locus_tag="RPW04_000445"
     CDS             5717..6739
                     /locus_tag="RPW04_000445"
                     /inference="COORDINATES: protein motif:HMM:NF014324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HDX6294564.1"
                     /translation="MRKLLTILASFLSLNANNANELYKKAIEFESKGDSKNALIYYKM
                     AAQKALENEQTRTDHISNLDKNQNLQKDSTHSIWQQTTQTTNLKYSQNNRIIKAENNK
                     ENNYNIFHLEPYKVNYLLPITYSSISNSDRKHTETKFQLSLKKAMFDNLFGLDETFYL
                     GYTQISWWQIAKESSPFRESNYQPEIFVDFPFKFDNFETLKSAQIGILHDSNGKSGKD
                     SRSWNRVYLRSVFEYGNFSLAPRVWYRIKDNKDDNPDITNYKGNADIEISYNLNNMRF
                     IATIANNLHFDKTNKGFFQFDFLFPIFNSGFYGYLQYFNGYAQSLIDYDKHESRVGAG
                     FVFFIR"
     gene            complement(6780..7493)
                     /locus_tag="RPW04_000446"
     CDS             complement(6780..7493)
                     /locus_tag="RPW04_000446"
                     /inference="COORDINATES: protein motif:HMM:NF023169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HDX6294565.1"
                     /translation="MKQILILLVFISFLNGRENPFVPTDINSTDLISTNMKDSAPPFE
                     TQIIKFPSDARELTSIVFYYKSIDGSIKQKVVDINGSFDWHDEFVLKNQITPNKTASK
                     ILDVSVTTVKADNNSNQNDKPSTKISNLVPKIEPPLKSLSFNDMIKFDIYAMKINIFT
                     ADPKIRDFVISKPDKIVIDFKRKNADFNTKTIKVDKGAVKKLTFGAHDGYYRVVISLD
                     GNYHYGIRQSDGGYTLILR"
     gene            complement(7510..7788)
                     /locus_tag="RPW04_000447"
     CDS             complement(7510..7788)
                     /locus_tag="RPW04_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009650923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator"
                     /protein_id="HDX6294566.1"
                     /translation="MSEILEEYKSPKSHRVNSFKNFFVYFIAISFVVMAGVYVGNALF
                     GKRSLDVMLDLYNQKASLQSDVQKLQEANSALQKEYFELIGLDPDSYK"
     gene            complement(7785..9035)
                     /gene="eno"
                     /locus_tag="RPW04_000448"
     CDS             complement(7785..9035)
                     /gene="eno"
                     /locus_tag="RPW04_000448"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDX6294567.1"
                     /translation="MVIVKKISAIEVLDSRGNPTIKTKVELCDGSIGEAIVPSGASTG
                     KREALELRDGGEAFGGKGVLKAIKNVNSMIAEEICGKDAYNQKAIDDAMLALDGTDNY
                     SRIGANAVLGVSMAVARAAANSLNIPLYRYLGGANACTLPVPMFNIINGGAHANNSVD
                     FQEFMIMPFGFSKFSNALRAATEVYQTLKKILNDLGHSTAVGDEGGFAPNLKDNEEPI
                     KIIMEAIKKAGYKPGEQIKLALDVASSELYDGKTYQIEGKKLTSEELVDRYVKLCDKY
                     PIFSIEDGLSEDDWDGWKILSEKLGDKIQLVGDDLFVTNEKILKEGIEKGIANAILIK
                     PNQIGSVSQTMQTVRLAQRNGYRCVMSHRSGESEDSFIADFAVALNTGEIKTGATSRS
                     ERNAKYNRLLEIELETSEFLGDKI"
     gene            complement(9035..10072)
                     /gene="recA"
                     /locus_tag="RPW04_000449"
     CDS             complement(9035..10072)
                     /gene="recA"
                     /locus_tag="RPW04_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDX6294568.1"
                     /translation="MDDNKKKSLDLALKQIDKAFGKGTVLRLGDKEIEPIDSISSGSI
                     GLDIALGIGGVPKGRIVEIYGPESSGKTTLTLHLIAESQKVGGVCAFVDAEHALDVKY
                     AKNLGVDTDNLYISQPDFGEQALDIVETLARSGAVDLIVIDSVAALTPKSEIEGDMGD
                     QHVGLQARLMSQALRKLTGVVHKMGTTVVFINQIRMKIGAMGYGTPETTTGGNALKFY
                     ASVRLDVRKIATLKQSDEPIGNRVKVKVVKNKVAPPFRQAEFDIMFGEGISKEGEIID
                     YGVKLDIIDKSGAWFSYDNSKLGQGRENSKAFLKENKAIADEITEKIRANMGDSIMSG
                     AVDEEEMEGDE"
     gene            10173..11039
                     /locus_tag="RPW04_000450"
     CDS             10173..11039
                     /locus_tag="RPW04_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDX6294569.1"
                     /translation="MKNVSVAHSPDADDIFMYEAIKFGWIDSNILQFSNTPADIQTLN
                     YEAIKGTYDVTAISFGLYPFIYEDYALLRTAVSFGEGYGPKLIKKKGVTLKPNFKVAL
                     SGEHTTNALIFKIAYPNARVVYKNFLDIENAVLSGEVDAGVLIHESILDFSSELCVER
                     EIWDIWCELRGDDSLPLPLGGMALRRSLPITDAIECERVLTNAVEVANNNKKLLCKML
                     LERNLVRVDDKKLEIYLNLYANDNSISMSKIQIKAVDRLFELGYKHGFYGNLITSSPN
                     LIPTEYLESRNA"
     gene            11039..11305
                     /gene="fliQ"
                     /locus_tag="RPW04_000451"
     CDS             11039..11305
                     /gene="fliQ"
                     /locus_tag="RPW04_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009650949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HDX6294570.1"
                     /translation="MQGDLIGLGVETFKLALLISLPMLLAGLIAGLIISIFQATTQIN
                     EMTLSFVPKIILVVVIIIFLMPWMMNQMIEFTARILNMIPTFIQ"
     gene            11302..12063
                     /locus_tag="RPW04_000452"
     CDS             11302..12063
                     /locus_tag="RPW04_000452"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDX6294571.1"
                     /translation="MKIDFSKLSSVKIGGIFDVEIIDKIRDFDGVLIGGANNILISPN
                     PPKMGILSSKFDYIKFENGILKVGGKTKTSTLFKFVQEHRLGGFEFIKKIPGTMGGLI
                     TMNAGLKEYEISQNLKNVTTNFGQILKNDCDFSYRHSSIKGVIYEASFEIVREFSDEL
                     SLFLNAKRTNQPKGASFGSCFTNPKGKYAGALLESVGLKGFRIGGCGFSEIHANFLIN
                     YGRGSFEDAVSLINLAKKRVLDEFGIELKSEVVIL"
     gene            12184..12258
                     /locus_tag="RPW04_000453"
     tRNA            12184..12258
                     /locus_tag="RPW04_000453"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12216..12218,aa:Asn,seq:gtt)
     gene            12378..12707
                     /locus_tag="RPW04_000454"
     CDS             12378..12707
                     /locus_tag="RPW04_000454"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294572.1"
                     /translation="MAITPLANTLYVNQNTPAAASVQGDFQSKLELQSAIAAQNAAEK
                     KKEVEEIRPTEETYKIDPEHEHQKKKNDQELSEQDETSDENLDENGSEDLEIDESQEV
                     HKLDIVV"
     gene            12712..13029
                     /locus_tag="RPW04_000455"
     CDS             12712..13029
                     /locus_tag="RPW04_000455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294573.1"
                     /translation="MKIIIVFLLVLAAFGADGINKVEIKSIENRVLKADVFGKNINSL
                     LVIYNNNNITNSCKLKASGATFDSIIRKWELTCNLPNISSKLEIRYLDSLNKPNQLTK
                     FIE"
     gene            13086..13829
                     /locus_tag="RPW04_000456"
     CDS             13086..13829
                     /locus_tag="RPW04_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDX6294574.1"
                     /translation="MKNRIITGLVLFAVFLVVALLDIFWLNFLIFGLILAVAFLESLK
                     LFKIEYKSLVFIVLAFFSILPFLTGINDIFKVILLNLIAVASVLAYTKSENLKFILPF
                     LYPSVPIFMMFALYQNYGIACLFWLIFTIVISDSGAYFTGKAFGKHNFSASSPNKTIE
                     GVIGGVILGSVLGAVFAFVFVDVEYSVAIFCSVLMSVLGVFGDLFESYLKRRVDLKDS
                     GTVLGEHGGVLDRIDGYLFGVVAMFLVLA"
     gene            13826..14908
                     /locus_tag="RPW04_000457"
     CDS             13826..14908
                     /locus_tag="RPW04_000457"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HDX6294575.1"
                     /translation="MILLGSSGSIGKNVAFLAMKYGIKLDALACKTDYKELNSQISKF
                     NPKFVYIEDNKLKNLVEHSRVFTSKDGIDKFLEACYDEFGSTVVINSLVGFSGLRPSL
                     VSQKLGFKLALANKESLVAGGKFLDTKSINPIDSEHFGLKFLLKNRPAVKKMIITASG
                     GAFYDMHINELEFVTAKSALKHPNWSMGAKITIDSATMANKLFEVLEAYHLYGIKDID
                     AFIERTSCIHALISFMDGSTTAHISRTDMKLAIAHAIGLEEKEILEPIDILSLKNISF
                     NTINLKKYPIFTLKKDVLNNPDLGVIINAANEEMVYKFLNNEISFLDINRAVFKSLDK
                     FGSVKIDDEDTVFEIDKKVREFCKGF"
     gene            14902..15540
                     /locus_tag="RPW04_000458"
     CDS             14902..15540
                     /locus_tag="RPW04_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009292521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HDX6294576.1"
                     /translation="MLMLMKERCGWVGDSQIYIDYHDYEWGRPVHDDKKLFEMLTLET
                     MQAGLSWITVLKKREAYRQAFCGFDPTKIALFDKNKIDELMQNQGIIRNRLKLESAVN
                     NSLIFLEIQKTRGSFDEMIWEYVDYKPVVGRWKKISDLPVSTPLSDKISKDLKKLGFK
                     FVGSTTIYSFMQAIGMMNDHLTSCFAYEEICKIKDNKNQKNLDGFVKDRNEK"
     gene            15530..16783
                     /locus_tag="RPW04_000459"
     CDS             15530..16783
                     /locus_tag="RPW04_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
                     /protein_id="HDX6294577.1"
                     /translation="MKNSSVYDGYHFRVSDALFGVQFLFVAFGALVLMPILTGLDVNV
                     ALFTAGIGTLIFQICTRKRVVPIFLASSFAFIAPIAFSIQEWGLPATMGGIVAAGLFY
                     VVLSFIVRFKGQKFIYKLLPPVVVGPVIITIGLILSPSAVDMAMGKGASYSNEIALSI
                     AGISLLSTIVAIIFTKGIFRLIPIIIGISVGYVVSIIYGVVDFSPIAKASWISMPNFT
                     APSFELNAILYMIPVAIAPTIEHIGNILAIGNVTKTDFIKDPGLKDTLLGDGLATSAA
                     AFFGGPPNTTYSEVTGAVRLTKAFNPGIMTWTAITAILLAFVGKLGAFIATIPAAVIG
                     GIMVLLFGIIASVGMETLIKHKVDLADPRNMIIVSLILVFAIGGMVFDFGAASFSGIG
                     LGAIMGVILNLVLPKTDKFDGYDGY"
     gene            16787..17239
                     /locus_tag="RPW04_000460"
     CDS             16787..17239
                     /locus_tag="RPW04_000460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294578.1"
                     /translation="MDRRKFIKNSLGLLGACAFPSTAFGSSDFYIDDKSLFDSTFSKL
                     KAVQSHIGFGYFNIISFDEVLKIARNSKIGAFNTAQINFMDFMFSEDPKKYGFYGRKT
                     CDRLTSAINKKISLKYLEQVIIYLKDCLMMYILDLLKMLEIRYFSQAA"
     gene            17170..17523
                     /locus_tag="RPW04_000461"
     CDS             17170..17523
                     /locus_tag="RPW04_000461"
                     /inference="COORDINATES: protein motif:HMM:NF014600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HDX6294579.1"
                     /translation="MPYDVYTRLVKDVGDTLFLTSGVRSVPKQMYLYMNKIKNSSYNI
                     SKASFSLAPPAHSYHSIGDFDVGKHGFGALNFTEEFIKTDEFKKLIELEYVSIRYTKK
                     NLDGVRFEPWHVQIN"
     gene            17507..18856
                     /locus_tag="RPW04_000462"
     CDS             17507..18856
                     /locus_tag="RPW04_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002864244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deacylase"
                     /protein_id="HDX6294580.1"
                     /translation="MYRLISFIVALGFLNALLAEDLEYSFIKKGYDDNNTVLVIGGIQ
                     GDEPGGFLAASLLATDYNITKGSVWVVPNLNFASIIKRDRGIYGDMNRKFDYISSNDP
                     DLKSVQGIKDLIVDQNVSLILNLHDGSGFYRPTYINDMENPRRWGNSSIIDQVSLDGV
                     PYGNLEEIASRVVSKINEKALKDQHKYYIRNTQTAKGDKEMLKSLTYFAIKKGKAAFA
                     NETSKSLPSHERAYYHLLAIEEYLKVAGIEFERNFDLTPRGVKNAIEKEIEIVLFDNK
                     FFLSLDHPRARIGYVPIPKNIALEYNASNPLTALVKDKDGYSVHYGNRVLTKLVPEYF
                     KYSSSINKVGVEIDGNETKEISLGSKINVENSVKIIKQDGIRVNFIGYGSQPIDESSI
                     SIHKKNIKRNYSIDKKGKTFRVELYEQKDGEQDKFIGMFLVEFASLEAFTFVDVAGL"
     gene            18853..19860
                     /gene="tsaD"
                     /locus_tag="RPW04_000463"
     CDS             18853..19860
                     /gene="tsaD"
                     /locus_tag="RPW04_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010401903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDX6294581.1"
                     /translation="MILGIESSCDDSSIALMDIDNFELKKYKKITQENEHSKFGGVVP
                     ELAARLHTAAIPNLIEDVKEFFTSIKAVAVTNEPGLSVSLISGVSAARALSLALGIPL
                     IGVNHLIGHIYSLFLDKNVVLPLGVLLVSGGHTMVLNIDESGYIKLIATTSDDSFGES
                     FDKVAKMMDLGYPGGAIIEKLALSGDKNRFNFTVPLKHDKRLEYSFSGLKNQVRTQIS
                     KFESLSLQDKSDIASSFQYTAISHITDKLEKIFSEYKFKNFGAIGGGSANQVLRSNLE
                     QICEKFGSNLMFAPLKFCSDNAAMIARAGVCKYKNKCFTKPLDMSINPRCKLDGANLY
                     F"
     gene            19884..22259
                     /locus_tag="RPW04_000464"
     CDS             19884..22259
                     /locus_tag="RPW04_000464"
                     /inference="COORDINATES: protein
                     motif:HMM:NF021492.1,HMM:NF024579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDX6294582.1"
                     /translation="MKYIILINLIVINMFGFTLSVNSGKDMGNDYYIAHLEDISDIVC
                     LKNTNQKGTTYICKVNAKMSGDIEDQDLPFMKVSFEPSKDGFIVTIVPKLNSKLIDSS
                     RALFDYEDVISKPATSSRHFTLIMDNRINEYSNLDSDGINFPIKYPNVLRPSIGALDL
                     NKEPLTYEENGDVGVYLSIKKSYEQGGYSDALRDATKALSLHPNSIFKSEFWLYYIRS
                     LDKLSKRVNDYKSAEKFSNQIIDAAKKWMKSYGSDRNYPEVLYMLMNAYLTSDMASDA
                     NYSLDILMTEHPDSHFTKMAILSYADDLFTKGKTEDAIRLYEDVLYSSNDINIASRAA
                     FKLAKVSLSALKFDEAKDYMQKVINANKNFILEDRDAAMQIAGEFRDKEMYDIASEIY
                     KIIFEGSNRTDNFYEPSLRNLAITLTKTDHPKEAYEYLKRYQKEFSTSEYMPEISAGI
                     DRLFFEFNDKTSEEKHEYYQSLMDKYKGLDIGKRALKEEVKLNFDEKKYQKVLNYTTK
                     IRDLNDTATLDILNKSAVVLANSSNQSGDCRTVVKLVSNYSIQNDIKDKFKLFNCYDR
                     TGKFEDAFNLSVSHIKDPDLNNRVQWFANLSKVLYRLGRYEEVIRASDEALSLAASVP
                     YSDPTESIFYRFYSLLKLNRFEEAISSINALESLRGNDLKLVEVYDAAAKYAYEKGFD
                     SAAFNYSKKTIDMQTKLNINTFSPDIDFIYISALVKISKFEDALMSARKLLDIRLKPD
                     TRLRALYQVAEIYINLNDFDSAKPYISECLNSNFDSPWKSLCEQQKKLIGL"
     gene            complement(22254..23156)
                     /gene="miaA"
                     /locus_tag="RPW04_000465"
     CDS             complement(22254..23156)
                     /gene="miaA"
                     /locus_tag="RPW04_000465"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDX6294583.1"
                     /translation="MFYEFALIGTTASGKSSFSIELAKEIEAVILSLDSLCLYKNIDI
                     ASAKPNKNELSIIKHFGINLVYPDSHFCVGDFIKEYHKAKEFAISKNCPLIITGGSGF
                     YLKSMLKGLSPKLEKIKIELNNDEIWSIAEKIDPNFTSKFSKNDEFRLHKWYQIYKLT
                     NEIPTNWLVKNTSAPTIQNLKIYELNWDKEELKNRIKNRTKIMLNSGLIDEAKKLFTT
                     YPKDIKALKSIGLKECGEYFEAKLGDIKSKEAILNLENLISIHTIQLAKKQRTFNSGA
                     FKDRIILDTKSLKVKHFLDKYLNL"
     gene            23241..24110
                     /locus_tag="RPW04_000466"
     CDS             23241..24110
                     /locus_tag="RPW04_000466"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate polyprenyltransferase"
                     /protein_id="HDX6294584.1"
                     /translation="MAKFTQILKDINELIVFKHSVFALPFLFSAMITASKLESGSMWF
                     GIPLLILGILCAVSARNYAMAFNRYLDEDIDRPNPRCASRPSVDGRIGRKNLLLFIIV
                     NGIIFIVVAYFINSLAFWLSFLFLIVLGGYSYFKRFSSLAHVVLGFCLGLSVIAGAIA
                     VSGNIPLWSILLCLGVIFWVGGFDILYSLQDIQYDKKVGLYSIPAIYGEKSAMFISAL
                     FHSLAVVFWLLFAGAAGLSFFGFLGVILCALVLYKEHTIVRADFKKIDKAFFTLNGYL
                     GIMFLLFVWVDLW"
     gene            24104..24607
                     /locus_tag="RPW04_000467"
     CDS             24104..24607
                     /locus_tag="RPW04_000467"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294585.1"
                     /translation="MVDFRLIDSKVAVSFEEDVDFKFELEFNESRSNIDEWLSHEKAR
                     GESENSDPLTLKLLVELYKKVDELSNLIKNEKTPPKPLKHMKITDKIGFEGFSFDEDC
                     LEKDVIYFAKISLPLFIKREILLYFKAVDCKTAKIVRIARSDEKEWSSYVAESERLEI
                     RKQKGNE"
     gene            24600..25124
                     /locus_tag="RPW04_000468"
     CDS             24600..25124
                     /locus_tag="RPW04_000468"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294586.1"
                     /translation="MSSEIFIYVGFGLLFLVLFGLIYSRDAQSNSKFAKFELVLEGLI
                     KENYQLKKQLNEQLNQPIVMQNDINLKDIYDQIDAKITDGINAKVIPMLESVKSIEKV
                     IDDFQNDQQNRIYNLEERTKTISKITPPGFDDNDENRIIQLYSSGKSIENIARDLRLS
                     VGRVIMVLKFHKVI"
     gene            25124..26092
                     /gene="moaA"
                     /locus_tag="RPW04_000469"
     CDS             25124..26092
                     /gene="moaA"
                     /locus_tag="RPW04_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HDX6294587.1"
                     /translation="MLIDSYGRVVDYLRVSVTERCNFRCRYCMPDEPFKDAGHSNVLS
                     YEEMFEFIKICLDNGVKKIRLTGGEPLVRKGVENFVAMINGYKSGLDLAMTTNGYFLA
                     KKAQALKDAGLKRINISLDTLDKTKAHFIARKDVLDNVIEGIETACNLGFGVKINTVA
                     LKSVNDNELIYLMDFAKEKGAQIRYIEFMENSHASSELQGLNKDQILDIISKKYNIKE
                     ITKSPNSPSSLFELEDGYKFGIIDPHKHDFCSTCNRLRLSAEGLLIPCLYYEDGKSIR
                     EAMRAGDIKKACEILNQVLADKPEKNKWENDGKGEISSRAFYQTGG"
     gene            26092..26817
                     /locus_tag="RPW04_000470"
     CDS             26092..26817
                     /locus_tag="RPW04_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDX6294588.1"
                     /translation="MVNVVEYFTSVQGEGKFSGRYSLFIRLGGCNLSCKGFGVKIKSP
                     KTGEILVGCDTIKAVQTEHFEHNKFDFEALVNLVKETEFKPLIVITGGEPLLWYKDED
                     LIKFIQWCFEQNYEVHFETNGSIFVDFDKFKVYKKCKFAVSVKLAISGEPKSKRINQK
                     ALQAIFANADAFYKFVICRSELGEINEILELQNGEVWCMPLGKNISELSKNAKRVAEF
                     CIKNGFNYSDRLHVRLWNDKEGV"
     gene            complement(26891..28039)
                     /locus_tag="RPW04_000471"
     CDS             complement(26891..28039)
                     /locus_tag="RPW04_000471"
                     /inference="COORDINATES: protein motif:HMM:NF012678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HDX6294589.1"
                     /translation="MNNFSFECPTKIVFGKDTIPKLSNLLPENLKILIIFGGGSVRKN
                     GIYEQVKNALNKHNVSEFWGIEPNPKLETCLKAVNLIKRDGIDFLLSVGGGSVLDATK
                     FIAAAAKFDGDPWDIVSKRAYFDKALPLGCVMSLPATGSEMNCVSVISNDSLKIKRSF
                     RNELLYPKFSIIDPKTTFSLPLAQIQNGIVDTFVHILEQYATVDLNTDVQDGFCFAVI
                     KTVIKNAKITINDPQSYDARANLCWAATCALNGWCSVGCTSDWSSHAIGHELSAVYGL
                     DHGLSLAVVTTRLLRYNLEFKKAKLAKMGREVFGLDGDEISVAKSCIDEIENFFKSTG
                     IATTLTELGMDKACVANLISERFKQRNLIVGEHGNIDYRAAKQILLEC"
     gene            28133..28714
                     /locus_tag="RPW04_000472"
     CDS             28133..28714
                     /locus_tag="RPW04_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase"
                     /protein_id="HDX6294590.1"
                     /translation="MIIRKMYDYENAHIVRFCSSKRCRESLHGHSYKCEVMLSSNYLD
                     NAEMVYDFGLMKQGIKTIIDSFDHTTTLYSKDDIEYKNDIKKYSKRWIELPYNPSAEQ
                     FSRVFFVLIDRLLGLTVMRNGEREVKLHSIIVHETASGYAQCFYEDAYNPNMGIINLE
                     DIVFSQGIIEEWKDAMFYDKLKNGIKFINPKEC"
     gene            28714..28893
                     /locus_tag="RPW04_000473"
     CDS             28714..28893
                     /locus_tag="RPW04_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002947188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294591.1"
                     /translation="MKFVWLFAAFILFLSGCSNEEQKPVQNVVSETPPPDVPIAKSDA
                     NINIDKDFPPAPVAE"
     gene            28900..>29247
                     /locus_tag="RPW04_000474"
     CDS             28900..>29247
                     /locus_tag="RPW04_000474"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294592.1"
                     /translation="MGETYEMSTWLHLSFIKILLGLLILHIVLVFVGDTSKFSYIKRL
                     MYFLPTYYVFLAFIFFTGVLNLAILHFSISFSVVFMIVCWIALIPFGAAGFKRLKRVR
                     ITKEFSKFKKFMIF"
BASE COUNT         9480 a         4614 c         5412 g         9741 t
ORIGIN      
        1 tatattgtcg attttttgtt aaacaatcca agataaatgg caaatataaa tccaagtccg
       61 accgcgtatg gtgcgtaagc agttattccg gctcctgagc ttgcaagtaa aaagttatga
      121 gcaaatccgg ctccggccat cattcctatg acaaatatag cagatcctaa atttccagtc
      181 cccatttgca caagatgttt tcctggacaa ccttcgctaa gactaaagca aagccccgct
      241 aaaaccatgc ctaaaaagtt ccatataaag tcattgtgag ctatgggttg agcttcaaaa
      301 ccaaatttat actgacccaa agctaaattt gttatgcttg caaaaacgat gatagatatc
      361 acgccccaaa acatagaaaa atcgcctcta aaagcttttg aaaatgcgcc tactgagcaa
      421 aacttacttt tgtgcataaa tacaccaact aaaactccag ctatcaaaga gaccgctata
      481 gcagcatgct cactagcagg accttttata gacgtaaaaa gtgcaccgtt tccggctttt
      541 agtccaaaaa ctagagccaa aagtaaaata acgctaaaaa ttacaggtaa aatacctaaa
      601 tttttactaa cggctacgct tttttctgtt ttgtaacctt tgcttttaaa aaacattccg
      661 accccgaccc cgactcctag tcctaaaaat cccgctatcg cagtcatatc tccgccatca
      721 agacgtaaaa atgcgcgcca aggacaaccc aaaaatacga gcgctcctat catcgcgaaa
      781 acgcctaaaa agaaatttga aaatgccgcg ggactgcttt ttggtgcaaa ttctttcgtc
      841 caaaataaac ttgctaaaaa gccgcctatg ataagcccca agatctccgg tcttagatat
      901 tgcaacgctt ctactttatg aaatcccaaa gcccccgcgc tatctctaag aaagcaagct
      961 gcgcaaattc ccatattgcc cggattgccg gcttgcacta aaagtgccgc taaaacaccc
     1021 aaaactccac ctgaaacgat aaaccatttt gtattcataa gaattccttg tatttgtata
     1081 agtcaaactg actttgtaga tattgtaaca aatttttaat gtttttgtaa tattaattta
     1141 agagttttca taatagccga agtatctatt taaactggct tttatttgaa attaacttaa
     1201 aaatattaaa tttatagagg ctttattcaa aaatttataa atttagtttt gaccttgttg
     1261 tatgtggttt taaaaaatgt attatattat ggacgaattt tttgaatttg cccataaata
     1321 aacatttaat tatttaacta aattcacgcc atcaagctct aaattttcat agtaaaatga
     1381 gaagtaaatg ttggatgata aaggtgaggt cgtgttattt tcataatctt catagtttga
     1441 gtaagccgct gaaaaatcat aagctttgat atcttttatc ttataagtgc tgcttattcc
     1501 attgacttct gttttaatga caagatccac tttatcgttt tttgatatga gttttaacag
     1561 ctcttttgcg ttgctttctt gagaatttac tgaaaacgat agacttttag cgtattttga
     1621 gagtatgcca tcggagtttg agtcgggaat agccggattt cctacgaaat tataatttat
     1681 atttatacca gaaagctcta agctaagact gctattttta cctataaacg tcgctgtaac
     1741 actatttttc gcgtatgcaa aacttgtcaa acctactaaa atcatacaaa tcaaaaatat
     1801 atttttcatc ttttctcctt aaatcagctt aaaatccctg ctccggctag tttttgactc
     1861 ctatctttcg catagattct ttgcttattt tttaaatcat atttccatat cggagcgttt
     1921 gccttgaagt cttctacaaa ctcatttata atagttaacg ccgcttttct tttggggctt
     1981 aacactcctg ctatgaagct cgaagtatgg tttggaacat cgccttttga gtgcgccata
     2041 aagatggtag tgtttttttc tttcgccttc ttttgccaca catcgaacca ttttttgagc
     2101 agcggttcat aaatatcaaa actaagaccg tctatgccgt cttcatcgcg cacgacgcct
     2161 acaaaagtta tgatcgcacc gtaatttaaa tttttactgt tatcatacca gcggtttgtt
     2221 atttcagtga cgtttaagct accgctaaaa agttctatgt cagagttcat tttaacctcc
     2281 gcaaacaggc ggtaaaatgc agattttatc tccgcttttt agtttggtat caagacttgt
     2341 aactatctcg tcatttaatg caacggcgct taaatttaac cactctttta aactttcatc
     2401 ttgattcaga atagttttta attcgccaag actagctgct tttatctcta aagattcttt
     2461 gtttataggt cctagaaatt ctacttttac cactgtttct ccttaaaaga tataatcata
     2521 tcctataata ttaaatttgt attcctatag ttttgtaatt tacgtaattt acaaacgctc
     2581 cgtttacgac ttttacgttt tgcttttttg tgtagtctat caagtaattt ccgctttgtg
     2641 tcgtgctaaa actaacgcag agtttggctg cgaaatttat gatatcctcg cttaatgtcc
     2701 gtttatttgt ttttacgacg acgtgagtgc tgggtctatc tttcagatga aaccaaaagt
     2761 catctttttt tgcattttta agcaaaaatt cattaccttt ttcgcttttt cctacgctta
     2821 ttttaaattc tcctacataa aaattctcta tcaaatcgct aagcttagta tttgattttg
     2881 tttgcgattt tttaggtgac aaaatactga tttcactggt acttttactt agtgagatga
     2941 tattttttag cttatttaga aactctattt tctcttttaa atttagaact tgcaagctta
     3001 tattggcagc tttttgcttt agttttttac tctctttaaa catctcattg gcactatttt
     3061 tagggctatt ttcgagtttt aaatttataa ttgcaccatt ttcatcagca agttttagtt
     3121 ctctttcata gtcgtttaaa agatacagat tcgcaatgat aagatttgcg tttttattta
     3181 gcttatgact ttgagtttct agctcttctt tactggggag ttcacttaaa tttgcattta
     3241 aattcgtaat ttttttatct aaatttaaaa gttttacctg ttttatctca tctaattttt
     3301 tggtttttag acgtaaaaat tccattttaa agtattcatc aaaattagtg atctgctcac
     3361 actcactttc ttttatatca aacggctcaa gtatggttaa ttttttgcca acttttatag
     3421 ttcttttttc gttttccata tgtcttaagg cttctaagat aatatcattt tcatcagtta
     3481 aaatgatatt cgtaaatcgc cccgtaaact cgagatataa aatcgaacta atagccttat
     3541 atgagccgtt tagcgtggtt ttaattttta atattctatt attctttaga gcttctacga
     3601 agtctatttt tgctgagttt agacgctttt tgagcgtgat atcaaaaggc gctttatact
     3661 cttttacggc gattttttca tctgttttgt atatacttga gttgctttta tttaaatcaa
     3721 agacaagagg ataatttcca tcaaatacta tttccaaagc gcaatcatca actcttttta
     3781 tgttagttat ttttttaaat ttagataaaa actcaggtat ttgtgttaaa actttatatt
     3841 tcataagcct gattatacca aaaatttgct acaataaccc aaatttagct aaggaaaatc
     3901 atgaagcaga caattactga aaaaattttt agcgaacacg tccagcacgc ggtttatgca
     3961 ggacaaatag tagaaactaa gattgatatg gttataggaa atgatatcac gactccgatt
     4021 tctatcaggg ctttcaaaga gagcggagca aaaaaactag caaatccgga cggctttgcc
     4081 atagtaatgg atcattatat cccggctaaa gatatagcaa gcgcaaatca agctaaaatc
     4141 agccgtgatt ttgcttacga gcatgatcta aagaactttt ttgatgaaaa agatatgggt
     4201 atcgaacacg ctttgatgcc agaaaaaggt cttgtagtgc ctggggacgt tattatagga
     4261 gccgactctc atacctgtac gcacggcgct cttggagcgt ttagcacggg aatgggaagt
     4321 acggaccttg cttacgctat gataactggt aaaaactggt tcaaagtgcc tgcaactata
     4381 aaagtagagt ttgtaggaaa acccgctaag catatttatg gtaaggattt gatacttgaa
     4441 gtcatacgtc aaatcggtgt tgatggtgct ttgtacaaag ctttagagtt ttgtggagat
     4501 gctatgaaat atcttgatat ggatagccgt tttagcttgt gcaatatggc tatagaagca
     4561 ggcggaaaaa gcggtataat agcagtagat gacataacaa aagagttttt agaaagtaaa
     4621 aatttacgct caaagccaaa gtttcactac agtgacgagg gcgcgaacta tgagcaggtt
     4681 ttacgcatag acgtaagcaa acttgatcct gttatcgcgt atccgttttt accgagcaat
     4741 ggaaaaagca taaacgaggc tttgaaagac gatctaaaaa tagatcaagt gttcatagga
     4801 agttgtacga acgggcgtct tagcgatctt aggatagcag cacgtatttt aaaaggaaaa
     4861 agagtggcta agcataccag gctcatcatc actccggcta cgcaaaaaat cgcacttgcc
     4921 gcgcaaaaag aaggacttat ggatatattt gtagaagcag gagccgtggt cagcaaccct
     4981 acatgcggag cttgtcttgg cggatatatg ggaattttag gagcaggcga gagatgcgta
     5041 agcactacaa atagaaactt tgtaggcaga atgggcgata gaactagtga agtatatctt
     5101 gcaaactccg cagtcgcggc ggcttccgcg atagccggta agatagcaga tccaagagtg
     5161 ctataagaaa gttaagcttg aaaaatgcac tgattttagc tggaggaaaa agcagcagaa
     5221 tgggaagcga taaaacactt cttgcttata aagattatcc tagcattacg cactttttat
     5281 ttgagcgttt gagcaagatc ttcaaagatg ttaaaatcag cgcaaaaaat gataaatttg
     5341 agcctaaact tcctgttttg gttgatgatt ttgatgattt ttctgctcta aaagtcatag
     5401 caaatttaga taaaaactat aacgagccgg ttttcatcat agcagcagat acgccatttg
     5461 taaagtttga aactataaaa gagctgtatt taaatttaaa aaataacgat atatcgcttc
     5521 caaaaggcgg tgagtttgtg catggacttt gtggatttta taatcctaaa gtgagcctag
     5581 cagcgcagtc tttgttgaaa aacggtatgc aaaaaatcgc acttttaagg gatctttgtc
     5641 ctactgttat caccgaattt aaagataaaa agcagttttt aaatttaaac actcaagccg
     5701 agtatgagtt gataaaatga gaaaattgct aactattttg gctagctttt taagtttgaa
     5761 tgcaaacaat gcaaatgaac tatataaaaa agcaattgaa tttgagagta aaggagatag
     5821 taaaaatgct cttatttact ataaaatggc tgctcaaaaa gctttagaaa atgagcaaac
     5881 tagaaccgac catatttcaa atttagataa aaatcaaaat ttacaaaaag atagtacgca
     5941 tagcatttgg cagcaaacta ctcagacgac aaacttaaaa tatagtcaaa ataaccgtat
     6001 aattaaagct gaaaataata aagaaaacaa ttataatatt ttccatttag aaccttataa
     6061 ggtaaattat cttcttccta ttacgtattc tagtatatca aattcagata gaaaacatac
     6121 cgaaacaaag ttccagctta gtctcaaaaa ggcgatgttt gataatttat ttgggcttga
     6181 tgagactttt tatcttggat atactcagat atcttggtgg cagatagcaa aagagtcttc
     6241 tccgtttaga gagagtaatt atcagccgga gatctttgta gattttcctt ttaaatttga
     6301 taattttgag actttgaaat ctgcccaaat aggcatatta cacgattcaa acggtaaaag
     6361 cggtaaagat tctagatctt ggaatagagt ctatttaaga tcggtttttg agtacggaaa
     6421 ttttagttta gctcctagag tttggtatag gattaaagac aataaagacg ataatccaga
     6481 tatcaccaat tacaaaggca atgcagatat agagatatct tataatttaa ataatatgag
     6541 atttatagct actatagcaa ataacttgca ttttgataag acaaataaag gtttttttca
     6601 gtttgacttt ttatttccta tatttaatag tggattttat ggatatttac agtattttaa
     6661 cggatatgcg caaagtctca tagactatga taagcatgag agccgagttg gcgccggatt
     6721 tgtatttttt atcagatagc tgcttttagc tatctgattt tatagcaaaa tacgttttat
     6781 tatcttagta taagagtata tccgccgtcg ctttgtctga taccgtagtg gtaatttcca
     6841 tctagtgaga taactactct ataatatcca tcatgcgcgc caaacgtaag ttttttaaca
     6901 gcgcctttgt cgacttttat agtttttgtg ttaaagtccg cattttttct tttaaagtcg
     6961 attacaattt tatctggttt gcttatcaca aaatctctga ttttaggatc ggcggtaaat
     7021 atatttatct tcatagcata aatatcaaat ttaatcatat cattaaaact caagcttttt
     7081 aaaggaggct ctattttcgg aactaaattt gagattttag tagatggttt atcattttgg
     7141 ttgctattat tatccgcttt taccgtagtt acggatacgt ctaggatttt tgaagcggtt
     7201 ttattcggcg ttatttgatt tttgagtaca aactcatcgt gccagtcaaa gctaccattt
     7261 atatcaacta ctttttgttt tatgctccca tcaatacttt tataataaaa aactatagac
     7321 gtaagttctc ttgcatcgct cggaaattta attatctggg tttcaaaagg cggagcgcta
     7381 tctttcatat ttgtagagat caagtcggta ctgtttatat ctgtaggaac aaacggattt
     7441 tcacgtccat tcaagaacga tataaaaact agtaagatta aaatttgttt catcattata
     7501 ctcgcgtgtt tatttatagc tatcaggatc taatcctata agctcgaaat actctttttg
     7561 caaagctgag tttgcttctt ggagtttttg tacgtcactt tgcaagcttg ctttttgatt
     7621 gtaaagatct agcataacat ctaaagatcg cttaccaaat aacgcatttc caacataaac
     7681 tccagccatc actacaaaag agatggctat aaaatataca aaaaaatttt taaaagagtt
     7741 aactctatga ctttttggcg atttatactc ttctaaaatt tcactcaaat tttatcccct
     7801 aaaaactcac tcgtttcaag ctctatctca agaaggcgat tatattttgc gtttctctcg
     7861 cttctgctcg tggcgccggt ttttatctca cccgtgttta acgcaacggc aaaatcagct
     7921 ataaaactat cttcactttc accgcttcta tgactcataa cgcagcgata accgtttctt
     7981 tgagctagac gaactgtttg catagtttga cttaccgagc cgatttggtt tggttttata
     8041 agaatagcgt ttgctatacc tttttctata ccttctttta ggattttttc atttgttaca
     8101 aatagatcat cccctactag ctgtatttta tcgcctagtt tttcactcag aattttccaa
     8161 ccatcccagt cgtcttcact aagtccgtcc tcaatggaga atatagggta tttatcgcaa
     8221 agcttcacat atctatcaac caactcttca cttgttagct ttttaccttc aatttgataa
     8281 gttttaccat cataaagttc acttgaagca acatcaagtg ctagttttat ctgttcgcct
     8341 ggtttgtagc ccgctttttt tatagcttcc ataataattt ttataggctc ttcgttgtct
     8401 tttaaatttg gcgcaaatcc accttcgtca cctactgcag tgctgtgtcc aagatcgttt
     8461 aatatctttt ttaatgtttg atatacttcg gttgcagctc ttagagcgtt actaaattta
     8521 gaaaatccaa agggcattat cataaattct tgaaaatcaa cgctattatt tgcgtgagcg
     8581 ccaccgttta taatattaaa cataggcacg ggtagcgtgc aggcatttgc tcctccaagg
     8641 tagcgatata acggaatgtt taagctattt gcagcagctc ttgctactgc catagatact
     8701 ccaagaaccg cgtttgcgcc gatacgcgag tagttatctg ttccatcaag cgctaacata
     8761 gcgtcgtcga tagccttttg attataggcg tcttttccac atatctcttc agctatcata
     8821 gaatttacat ttttaatagc ttttaaaaca cctttgcctc caaatgcttc tccgccatct
     8881 ctaagttcta aagcttcgcg ttttccagta ctcgcgccgc ttggtactat agcttctcct
     8941 atacttccgt cgcatagctc tactttggtt tttatagttg gatttccacg actatctaaa
     9001 acttctatag cactaatctt ttttacgata accattactc gtctccttcc atttcttctt
     9061 catctactgc accgctcatt atgctatcac ccatatttgc acggattttt tctgttattt
     9121 catctgctat tgctttattt tcttttaaaa acgcttttga gttttctctg ccttgaccta
     9181 attttgaatt atcatagcta aaccaagcgc cgcttttatc gataatatca agttttacgc
     9241 cgtaatctat tatctctcct tctttgctga taccttctcc aaacatgata tcaaattcgg
     9301 cttgtctaaa aggaggagcg actttgtttt ttactacttt tacttttacg cggtttccga
     9361 ttggctcatc gctctgtttt aaagtagcta ttttacgtac gtcaagtcta actgaagcgt
     9421 aaaatttaag cgcatttccg ccagtagtag tttcaggagt gccatagccc atagcgccga
     9481 ttttcatacg aatttggttt ataaatacaa ctgtagttcc cattttatgg acaactccgg
     9541 ttaattttct aagtgcttga ctcatgagtc ttgcttgcag ccctacgtgc tgatctccca
     9601 tatcgccttc tatttcgctt tttggtgtta aagctgctac gctatctatt actataagat
     9661 caacggcgcc gcttctagct agagtttcta ctatatcaag agcttgctct ccgaagtccg
     9721 gttgagaaat atataagtta tccgtatcaa cgcctaaatt tttagcatat ttaacatcaa
     9781 gtgcatgctc tgcatctaca aacgcgcaaa ctccgccgac tttttgagat tctgctatta
     9841 aatgcaaagt aagagttgtt ttaccagagc tttctggccc ataaatttcg actattcttc
     9901 cttttggtac gccgcctata ccaagagcta tatcaagtcc tatcgatcct gaggagatag
     9961 aatctatcgg ctctatttcc ttgtctccta gccttaaaac agtgcctttg ccaaaagctt
    10021 tatcaatctg ctttaaagca aggtctaggc tttttttctt attatcatcc atgattttcc
    10081 tcttaaaaat ttaagttatt ttaccctaaa gtattaaaaa ttaagctaaa tttgaataca
    10141 ctgctaacaa aaagtcaaaa aaggtaaaaa atttgaaaaa tgtaagcgta gctcactctc
    10201 cagatgccga tgatattttt atgtatgaag ctattaaatt cggctggatt gatagtaata
    10261 ttttgcaatt ttcaaatacc ccagccgata tacaaacgct aaattacgaa gccataaaag
    10321 ggacttatga cgtgactgct ataagttttg gtttgtatcc gtttatatat gaagattacg
    10381 ctcttttacg tactgcagtg agttttggag agggatatgg accaaaatta attaagaaaa
    10441 aaggcgttac tttaaaacca aatttcaaag tcgcgcttag cggtgagcat actacaaatg
    10501 cgctaatttt taagatagct tatccaaatg ctagagttgt ttataaaaac tttttagata
    10561 tagaaaatgc ggttttaagc ggtgaagtcg atgccggagt tcttatacac gagagtattt
    10621 tggattttag tagtgagctg tgcgtggagc gtgaaatttg ggatatttgg tgtgagctta
    10681 gaggagatga ttcattgcca cttcctcttg ggggaatggc acttagaagg agtttgccta
    10741 taaccgacgc tatagagtgt gaaagagttc ttacaaatgc agttgaggtt gcgaacaata
    10801 ataaaaaact actttgtaaa atgcttcttg agcgaaattt ggtaagagta gatgataaaa
    10861 aacttgaaat atatctgaat ttatacgcaa acgataattc gataagtatg agtaaaatac
    10921 agataaaagc agttgatagg cttttcgagc taggttataa acatggattt tatggaaatt
    10981 taataacttc tagccctaat ctcataccga ctgaatattt agaaagcaga aacgcttaat
    11041 gcaaggcgat cttataggac ttggagtaga aacgtttaaa ctagctttgc ttataagttt
    11101 gccgatgctg cttgctgggc ttatcgcagg acttataata agcattttcc aagctactac
    11161 tcaaataaac gagatgactc ttagcttcgt accaaaaatc attttagttg tcgttataat
    11221 catattttta atgccgtgga tgatgaatca gatgatagaa tttactgcta gaatactaaa
    11281 tatgataccg acttttatcc aatgaaaata gatttttcaa agcttagttc agtgaaaatc
    11341 ggcggtattt tcgatgtgga gataatagac aaaatacgtg attttgatgg agttttgata
    11401 ggcggagcaa ataatatatt aatctcgccc aatcctccaa aaatgggaat tttaagttct
    11461 aaatttgatt atattaaatt tgaaaacggt attttaaaag taggtgggaa aaccaaaacc
    11521 tccactcttt ttaaatttgt tcaagagcat aggctcggcg gatttgagtt tataaaaaaa
    11581 attcctggaa caatgggcgg cttgattact atgaatgccg gtctgaaaga gtatgaaata
    11641 tcacaaaatt taaaaaatgt aactacgaat ttcggtcaaa ttttaaaaaa cgattgcgat
    11701 tttagctacc gacactcatc tatcaaaggt gttatttacg aagctagttt tgagattgtg
    11761 cgtgagttta gcgatgagct gagtttgttt ttgaacgcaa aaagaacaaa ccagccaaaa
    11821 ggcgctagtt ttggctcttg ttttacaaat ccaaaaggga aatacgccgg agctttactt
    11881 gaaagtgttg gattaaaagg ttttaggata ggcggatgcg gatttagcga gattcatgca
    11941 aattttttga taaattacgg cagaggaagt tttgaagatg ccgtgagtct tataaattta
    12001 gctaaaaaac gggttttaga tgagtttgga atagagttaa aaagcgaagt tgttatattg
    12061 tagtcgatgt ttttgtttta aaatttaata aaacctctgc taaataaaaa atatttttaa
    12121 aaaatactgt ttggattatt gacaaataca aaagttttcg ttataatctc aactcttttt
    12181 tattccggat tagctcagcg gtagagtagt cggctgttaa ccgattggtc gctggttcga
    12241 atccagcatc cggagccact tcaaatttaa atcaacttac atctatagat aatcctaaat
    12301 ttgccgatta ctatttaaag attttatttt tattttatca aatttggata aaatcataaa
    12361 aattaaggag gagtataatg gcaattactc cattagcaaa tacgctctat gttaatcaaa
    12421 acactccagc agcagctagc gtgcaaggtg attttcaatc aaaactcgag cttcagtccg
    12481 ccattgcagc ccaaaatgca gccgaaaaga aaaaagaagt agaggagatc cgacctaccg
    12541 aagagactta taaaatagat ccagagcatg agcatcaaaa gaaaaaaaat gatcaagagc
    12601 ttagcgaaca agatgagact tctgatgaaa atttagatga aaacggttct gaggatttag
    12661 aaatagacga gtcgcaagaa gtacataaac tagatatcgt tgtttagttt tatgaagata
    12721 atcattgttt ttctgcttgt cttagcagcg tttggagccg atgggataaa taaagtagag
    12781 ataaaaagta tagaaaacag agtgcttaaa gccgatgttt ttggtaaaaa tataaatagt
    12841 ttgctagtaa tttataataa caataatatc acaaatagct gcaagctaaa agcgagcgga
    12901 gctacatttg attctatcat aagaaaatgg gaattaacct gcaatcttcc aaatatctca
    12961 agcaaacttg agatcagata tttagattcg ctaaataaac caaatcaatt aactaaattt
    13021 atagagtaat tttaggctct tttttagtta aaattcgcta atatttcata taaaaaggaa
    13081 ataaagtgaa aaatcgcatc ataactggtt tagtgctatt tgcagttttt ttagttgttg
    13141 cgctgcttga tatattttgg ctaaattttt tgatatttgg tcttatttta gccgtagctt
    13201 ttttggagag tttgaaacta tttaagatag agtacaaaag tcttgttttt atagttttgg
    13261 catttttttc gatacttccg tttttaaccg gaataaatga tatatttaaa gttattttat
    13321 taaatttaat agccgttgct tcggttttgg catatacaaa atctgaaaat ttaaagttta
    13381 tactaccttt tttatatcct agcgttccta tatttatgat gtttgcttta tatcaaaatt
    13441 atggaattgc ctgcttattt tggttgattt tcactatcgt gataagcgat agcggagcgt
    13501 atttcaccgg aaaagcattc ggtaagcaca atttttctgc ttcaagtcca aataaaacta
    13561 tagaaggcgt tataggcgga gttattttag gaagcgtttt gggggctgtt tttgcatttg
    13621 tatttgtaga tgttgagtat agcgttgcca ttttttgttc ggtgttaatg agtgtacttg
    13681 gagtttttgg agatttattt gagagttact taaaaaggcg cgtagatctc aaagatagcg
    13741 gcactgtttt aggcgaacac ggaggcgttt tagatagaat agacggatat ctttttggtg
    13801 tagttgctat gtttttggta cttgcatgat actattaggc agtagcggca gcataggaaa
    13861 aaatgttgct tttttggcta tgaagtatgg tatcaaacta gatgctttag cttgtaaaac
    13921 agattataaa gaacttaata gccaaatttc taaatttaat cctaaatttg tttatataga
    13981 agataataaa ttaaaaaatc ttgtggagca tagtagagtt tttactagca aagatggcat
    14041 agataaattt ttagaagctt gttatgatga gtttggttct accgttgtta tcaactcatt
    14101 agtgggtttt agtgggttga gaccgagttt agtttctcaa aaacttggat ttaagctagc
    14161 tttggcaaat aaagagagtt tagtagcagg cggtaaattt ttagacacaa aaagtattaa
    14221 tcctatagat agtgagcatt ttgggcttaa atttttgctt aaaaatagac ctgctgtcaa
    14281 aaaaatgatt ataactgcga gcggtggcgc attttatgat atgcacataa acgaacttga
    14341 gtttgtaact gctaaaagcg ctctgaaaca tccaaattgg agcatgggag caaaaataac
    14401 tatagatagt gcaactatgg caaacaagct atttgaagtg cttgaagctt atcatttata
    14461 cggtattaaa gatatagatg cttttataga gcgtacatct tgtattcatg ctcttataag
    14521 ttttatggac ggttctacta ctgctcatat atcaagaacc gatatgaaac tagccattgc
    14581 tcatgcaata ggtcttgaag agaaagaaat cttagaacct attgatattt taagcttaaa
    14641 aaatattagt ttcaatacta taaatttaaa aaaataccct atatttactc taaaaaaaga
    14701 tgttttaaat aatccggatt taggcgttat cataaatgcg gcaaatgaag agatggtata
    14761 taaattttta aataacgaaa tttcgttttt agatatcaat agagctgttt ttaaatcgct
    14821 tgataaattt ggaagcgtta aaatagacga tgaagatact gtttttgaga tagataaaaa
    14881 agtcagagag ttttgtaaag gattttaatg ttgatgaaag agcgttgcgg ttgggtagga
    14941 gatagccaaa tatatatcga ttaccacgat tatgagtggg ggcgaccggt tcatgatgac
    15001 aaaaaattat ttgaaatgct gactttagaa accatgcaag caggactttc ttggatcacg
    15061 gttttaaaaa aaagagaagc atatagacaa gctttttgtg gctttgatcc aactaaaata
    15121 gcactttttg ataaaaataa aattgatgag ctaatgcaaa atcaaggaat tatcagaaat
    15181 agattaaaac ttgaatcggc cgttaataac tctttgattt ttcttgaaat tcaaaaaact
    15241 agaggaagct ttgatgaaat gatatgggaa tacgttgatt ataaacctgt tgtcggacga
    15301 tggaaaaaaa tctcagattt accggtctca actccgcttt ctgataagat aagtaaagat
    15361 ttaaaaaaat taggatttaa atttgtagga tcaactacga tttattcatt tatgcaagct
    15421 ataggtatga tgaacgatca tttaacgagc tgctttgcgt acgaagaaat ttgtaaaata
    15481 aaagataata aaaatcaaaa gaatttagat ggttttgtaa aggatcgaaa tgaaaaatag
    15541 tagcgtttat gacggctatc atttcagagt tagcgatgca ctttttggcg tacaattttt
    15601 atttgtagct tttggcgctc tcgtacttat gccgatccta accggacttg atgtgaatgt
    15661 tgcgctattt acagccggta ttggtactct tatttttcaa atttgcacta gaaaacgtgt
    15721 agttccgata tttttagctt cgagttttgc ttttatagcg cctatagctt ttagtataca
    15781 agagtgggga ctaccagcca ctatgggcgg aatagtcgct gccggactat tttatgtagt
    15841 tcttagtttt atagttagat ttaaaggtca aaaatttata tataaacttt tgcctccagt
    15901 ggtagttggc ccggttatca taactatagg tttgatacta tctccaagtg cggtagatat
    15961 ggctatggga aaaggagcta gctattcaaa tgaaattgct ttaagcatag caggaatttc
    16021 acttttatct accatcgttg cgataatatt tactaaaggt attttcagac ttatacctat
    16081 aataatagga ataagcgtag gatacgtagt ttctattatt tacggagttg tcgatttttc
    16141 tcctatagct aaagctagtt ggatatctat gccaaatttt accgctccta gttttgagct
    16201 aaatgcgata ctttatatga taccagtcgc gatagctccc accatagagc atataggaaa
    16261 tattttagcc ataggaaatg ttacgaaaac tgattttata aaagatcccg ggcttaaaga
    16321 tacgctttta ggagatggtt tagctacatc tgcagctgca tttttcggag gaccgcccaa
    16381 tacgacttat tcagaagtaa ccggagctgt gcgactcaca aaagcattta atccaggtat
    16441 tatgacttgg actgctataa cggctatact tttggctttt gtgggcaaat taggcgcgtt
    16501 tatagcgact attcccgctg ctgttatagg cggtataatg gtgcttttat tcggtattat
    16561 agcaagcgtg ggaatggaaa ctcttatcaa gcataaagta gatttggcag atcctagaaa
    16621 tatgataata gtatctttga tattagtttt tgctatagga ggaatggtgt ttgatttcgg
    16681 tgcggctagt tttagcggaa tagggcttgg tgcaattatg ggcgtgattt taaacttagt
    16741 gcttccaaaa acagataaat ttgatggata tgatggatat taacatatgg atagacgtaa
    16801 atttataaaa aatagtttag gacttttagg agcatgtgcg tttcctagca cggcgtttgg
    16861 tagtagtgat ttttatatag acgataagtc gctttttgat agtactttta gtaaattaaa
    16921 agccgtgcag tctcatatag gatttgggta ttttaatata attagttttg atgaggtatt
    16981 aaaaatagct agaaattcaa aaatcggtgc atttaataca gctcaaataa attttatgga
    17041 ctttatgttt agtgaggatc ctaaaaaata tggtttttac ggtaggaaaa cttgcgatag
    17101 attaactagt gctataaata aaaagatatc gttaaaatac ctagaacagg tcattatcta
    17161 tttaaaggat tgccttatga tgtatatact agacttgtta aagatgttgg agatacgcta
    17221 tttctcacaa gcggcgtaag aagtgtgcca aaacagatgt atttatatat gaataagata
    17281 aaaaatagca gttataatat atcaaaagct agtttttcgc tagctcctcc tgctcatagt
    17341 taccatagta ttggtgattt tgatgttgga aaacacggtt ttggtgcgct taatttcacc
    17401 gaggagttta taaaaacaga tgaatttaaa aagcttattg agttagagta cgtatctata
    17461 agatatacga aaaaaaattt agatggagtt agatttgaac cgtggcatgt acagattaat
    17521 tagttttatt gtggcgttgg gctttttaaa tgctctttta gcagaggatc ttgagtattc
    17581 ttttatcaaa aaaggttatg acgataacaa tacggttctt gtcataggcg gtatacaagg
    17641 cgatgagccg ggaggttttt tggcagctag tttgttggct actgattata atattacaaa
    17701 aggttcggtt tgggtagttc cgaatttgaa tttcgctagt attataaaaa gagatcgtgg
    17761 aatttatgga gatatgaata gaaaatttga ttatataagc agtaatgatc ctgatttaaa
    17821 aagtgtacaa ggcataaaag atttaatagt agatcaaaac gtctctttga tactaaattt
    17881 acacgatgga agcggatttt atagaccaac atatataaac gatatggaaa atccaagaag
    17941 atggggcaat agctctatta tagatcaagt tagtttagac ggcgtaccat acgggaattt
    18001 agaagagatc gcctctagag ttgtatctaa aatcaatgaa aaagctctta aagatcagca
    18061 taaatattat attagaaata cgcaaactgc aaaaggcgat aaagagatgc taaaatctct
    18121 cacttacttt gccattaaaa aaggtaaagc cgcatttgca aacgaaacta gcaaatcttt
    18181 gcctagccat gagagagcct attatcatct tttggctata gaagagtatt taaaagtcgc
    18241 cggaatcgag tttgagagaa attttgatct tactccaaga ggggttaaaa acgctataga
    18301 aaaggagatc gagatagttt tatttgataa taaatttttc ttaagtttag atcatccaag
    18361 agctagaata ggctacgttc ctatacctaa aaatatcgcg cttgagtaca acgcgagcaa
    18421 tcctctaact gctcttgtca aagataaaga tggctatagc gtgcattatg gaaatagagt
    18481 tttaacaaaa ttagtacccg agtattttaa gtattcaagc agtataaata aagttggagt
    18541 cgagatagac ggcaatgaga ctaaagagat aagtttaggc tcaaaaataa atgtagaaaa
    18601 tagtgtaaaa atcatcaaac aagatggaat tagagtaaat tttataggat acggaagtca
    18661 acctatagat gagtcaagta tttctataca taaaaaaaat atcaaaagaa actattctat
    18721 agataaaaaa ggaaaaactt ttagagttga gttatatgag caaaaagacg gcgagcaaga
    18781 taaatttata ggtatgtttt tagtagaatt cgcgtcttta gaggctttta catttgtaga
    18841 tgtggccgga ctatgatctt aggtatagaa agcagttgcg atgatagctc catagctctt
    18901 atggatatag ataactttga gttaaaaaaa tataaaaaaa ttactcaaga aaacgagcat
    18961 tctaaattcg gaggcgtagt tccagaactt gccgctaggc ttcataccgc cgctattcca
    19021 aatttaatag aagatgtaaa ggaatttttt acatccataa aagccgttgc tgttacaaac
    19081 gagcctggac ttagcgtgag tttgataagc ggcgtgagtg cggcaagagc tttaagcttg
    19141 gctttaggta ttccgttaat aggagtaaat catctcatag gtcatatcta ctctctgttt
    19201 ttagataaaa atgttgtttt gccccttggc gtacttttgg tgagcggtgg acatactatg
    19261 gttttgaata tcgatgaaag cggttacata aagttgatag ccacaactag cgacgatagt
    19321 ttcggagaga gttttgataa agtagctaaa atgatggatt taggatatcc gggcggagcc
    19381 attatagaaa aattagcttt gagcggagat aagaatcgat ttaattttac ggttccatta
    19441 aaacatgata aaaggttgga atacagtttt tcggggctta aaaatcaagt tagaacgcag
    19501 atctctaaat ttgagagttt gagtcttcaa gacaaaagcg atatagcttc aagttttcag
    19561 tatactgcta tttctcacat aacagataag ttagaaaaga tttttagtga gtataaattt
    19621 aaaaacttcg gtgctatagg cggaggaagt gcaaatcaag ttttgagatc aaatttggag
    19681 caaatttgcg agaaattcgg ctcaaattta atgtttgctc cgcttaagtt ttgtagtgat
    19741 aatgctgcta tgatagcacg cgcaggagtt tgtaaatata aaaataaatg cttcacaaag
    19801 cctcttgata tgtcgataaa tccaagatgt aagcttgatg gcgcaaatct ttatttttaa
    19861 atttttatgt tataatcttt ttaatgaaat atataatttt aataaatttg atcgttatta
    19921 atatgtttgg ctttactctt agcgtaaata gcggaaaaga tatgggcaac gactactata
    19981 tagcacattt agaagatatt tctgatatcg tatgtctgaa aaataccaac caaaaaggta
    20041 cgacttatat atgtaaagtc aatgctaaga tgagcggtga tatagaagat caggatttgc
    20101 cgtttatgaa agttagtttt gagccgagca aagatggatt tatcgttact atagttccta
    20161 agctaaactc gaaattaatc gattctagta gagctttgtt tgattacgaa gatgtgatat
    20221 ctaagcccgc aactagttct aggcatttta ctttgataat ggataataga attaatgaat
    20281 actcaaactt agatagcgac ggtataaatt ttccgataaa atatccaaat gttctaagac
    20341 cgtctatagg cgctttagat cttaacaaag aacctcttac ttatgaagaa aacggtgatg
    20401 taggcgtata tctttctatt aaaaaaagct atgagcaagg cggatatagt gatgctttaa
    20461 gagacgctac aaaagcttta agcttgcatc ctaatagtat atttaaaagc gagttttggc
    20521 tctattatat acgttcgctt gacaaacttt ctaaaagagt aaacgactat aagtctgctg
    20581 aaaaatttag caatcaaata atagacgcag ctaaaaaatg gatgaaaagt tatggatcag
    20641 atagaaacta tccagaagtt ttgtatatgc ttatgaacgc atatctcaca agcgatatgg
    20701 cgagcgatgc aaactactct ttggatatac tgatgactga gcatccagac tctcatttta
    20761 ccaaaatggc gatactgtca tacgccgatg atctatttac aaagggaaaa acagaagacg
    20821 ctatcaggct ttatgaagat gttttatact cttcaaacga tataaatata gccagcagag
    20881 ccgcttttaa acttgctaaa gttagtttat cggctcttaa atttgatgaa gctaaagatt
    20941 atatgcaaaa agttataaat gcaaacaaaa actttatttt agaagataga gacgccgcta
    21001 tgcaaattgc cggtgagttt agagataaag agatgtacga tatagcttct gaaatttata
    21061 aaataatatt tgaaggatca aatagaaccg ataattttta tgagccttcg cttagaaatt
    21121 tggccataac tcttacaaaa acagatcatc caaaagaggc ttatgagtat ctaaaaagat
    21181 atcaaaaaga gtttagcact agtgaatata tgcctgaaat ttcagccgga atcgacagac
    21241 tgttttttga atttaacgat aaaacaagcg aagaaaagca tgagtattat cagagtttaa
    21301 tggataaata taagggtcta gatataggta aaagagcact taaagaagaa gtaaaactaa
    21361 attttgatga gaaaaaatat caaaaagttt taaactatac gacaaaaatc agagatttaa
    21421 atgacactgc tactttggat atattaaata aatcagcagt ggttttagcc aactcgtcaa
    21481 atcagagcgg agactgcaga acagttgtca agctagtaag caactactct atacaaaatg
    21541 atataaaaga taaatttaag ttatttaact gctatgatag aaccggtaaa tttgaagatg
    21601 cttttaatct ttctgtttcg catataaaag atccggattt aaacaacaga gttcaatggt
    21661 ttgcaaattt aagtaaggtt ttataccggc ttggcagata tgaagaggtg attagagcta
    21721 gcgacgaagc tcttagtttg gcggctagcg tgccgtattc agaccctact gaatctattt
    21781 tttacagatt ttactctttg ttgaaattaa atagatttga agaggcaatt tctagtataa
    21841 atgcgcttga gagtttaagg ggaaatgatt taaaacttgt tgaggtatat gacgctgcgg
    21901 caaaatatgc atatgaaaaa ggttttgata gtgcggcatt taattattca aaaaagacta
    21961 tcgatatgca aacaaagcta aatataaata cgtttagccc cgatattgat tttatatata
    22021 tttctgcttt ggtaaaaatt tctaaatttg aagatgctct tatgagcgca agaaagcttc
    22081 ttgatatacg tttgaaacca gatactcgtt taagagcatt atatcaagta gcagaaattt
    22141 atataaattt aaatgatttt gactccgcaa aaccgtatat aagcgagtgt ctaaactcga
    22201 atttcgactc tccttggaaa agtctttgtg agcagcaaaa aaagcttata ggcttataaa
    22261 tttaaatatt tatctaaaaa atgtttgact ttaaggcttt ttgtatctaa tataatccta
    22321 tctttaaatg ctcctgagtt gaacgttcgt tgttttttag ctaattgaat agtatggatc
    22381 gatatgagat tttctaaatt taaaatagcc tctttgcttt ttatatctcc taattttgct
    22441 tcaaaatatt cgccgcactc tttaagacct atggatttta gtgctttgat atcttttggg
    22501 taggtggtaa aaagtttttt ggcttcatct ataagacctg agtttaacat aattttcgtt
    22561 ctgtttttta tgcgattttt taactcttct ttatcccagt ttagttcgta tatttttaag
    22621 ttttgtatag ttggggcaga ggtgtttttg actaaccaat tagttggaat ttcgtttgtt
    22681 aatttataaa tttgatacca tttatgaagt ctaaattcgt catttttgct aaatttagat
    22741 gtgaaatttg gatcgatctt ctctgcgatg ctccaaattt cgtcattgtt aagttctatc
    22801 tttatctttt caagttttgg actaagtcct tttaacatag atttgagata aaacccgcta
    22861 ccaccagtta tgataagcgg acaatttttt gatattgcaa attcctttgc tttatgatac
    22921 tcttttataa aatccccaac acaaaaatgg ctatctggat atactaaatt tatcccaaaa
    22981 tgctttatga tgcttaactc gtttttgttt ggttttgcgc ttgctatatc tatgtttttg
    23041 tataaacaaa gcgaatcaag actcaaaata acagcttcga tttcttttgc taactctata
    23101 gaaaagctgc tttttccgct cgccgttgtt ccgataagag caaattcgta aaacattctc
    23161 accctttttt agtgcgattt tatcaaaaaa aagctaaatt tataaaaaat tagataaaat
    23221 aagtagttta aaggaagatt atggctaaat ttactcaaat tttaaaagat ataaacgaac
    23281 tgatagtttt caaacattca gtttttgcac taccgttttt gttttctgct atgataacag
    23341 ctagtaaact tgaaagcggt tctatgtggt ttggaattcc gcttttaatc ctcggtattt
    23401 tatgtgcagt tagcgctaga aattatgcta tggcatttaa tcgctacctt gatgaggata
    23461 tagacagacc aaatccaaga tgtgcttctc gcccgagcgt agatggtaga atagggcgca
    23521 aaaatcttct cttatttata atcgtaaacg gtattatttt tatcgtcgtg gcgtatttta
    23581 taaattcact tgcattttgg ttgagttttt tatttttaat agttcttggc ggatactctt
    23641 attttaagag attttctagt ttggctcacg ttgttttagg attttgtctt ggattgtctg
    23701 ttatagccgg agctatagct gttagcggaa acattcctct ttggtctata cttctttgtt
    23761 tgggtgtaat tttttgggtc ggaggatttg atattttata ctctttacaa gatatacagt
    23821 acgataaaaa agtcggactt tatagcattc ctgctatcta cggagaaaaa tcagctatgt
    23881 ttatctcggc tttatttcac tctttagccg ttgttttttg gctacttttt gcaggtgctg
    23941 caggactaag tttttttggt tttttaggtg tcattttatg cgctttagta ctttataaag
    24001 agcatacaat agtcagggct gattttaaaa aaattgacaa ggcatttttt acattaaatg
    24061 gctatttagg cattatgttt ttactatttg tgtgggtgga tttatggtag atttcagact
    24121 tatagactct aaggtcgcag ttagctttga agaagatgtg gatttcaaat ttgaacttga
    24181 atttaatgag agcagatcaa atattgatga atggctaagc cacgaaaaag caagaggaga
    24241 gagtgaaaat tcagatcctc tcactttgaa gcttttagtt gagctttaca aaaaagtaga
    24301 tgagctttca aatttaataa aaaatgaaaa aactccgcca aagcctttaa aacatatgaa
    24361 aataacagac aaaataggct ttgaaggatt tagttttgat gaggattgtt tggaaaaaga
    24421 tgttatttat tttgctaaaa tttcattgcc tcttttcatc aaaagagaga ttttgctcta
    24481 tttcaaagca gtagactgca aaaccgcaaa aatagtaaga atagcaagaa gcgatgaaaa
    24541 agagtggtcg tcttatgtag ccgagagtga gagattagag ataaggaaac aaaaaggtaa
    24601 tgagtagcga aatttttatc tatgttggtt ttggactgct ttttttagtt ttgtttgggc
    24661 ttatttattc aagagatgct cagtcaaata gtaaatttgc taaattcgaa cttgttttag
    24721 agggtttaat aaaagaaaat tatcagttaa aaaaacagct aaacgagcag ttaaatcaac
    24781 ccatagtaat gcaaaacgat ataaatttaa aagatatata tgatcaaata gatgctaaaa
    24841 tcacagacgg cataaatgcc aaagtcattc ccatgttaga gagtgtaaaa agtatagaaa
    24901 aagtcattga tgattttcaa aatgatcaac aaaatagaat atataatcta gaagagcgaa
    24961 caaaaactat aagcaaaatt actcctccgg gttttgatga taatgatgaa aatagaatta
    25021 tccagctata tagctcagga aaaagcatag aaaacattgc tagagatttg agacttagtg
    25081 taggtagggt gataatggtt ttaaaatttc ataaggtgat ttaatgctga tagatagcta
    25141 tggaagagtt gttgattatt taagagtttc agtgactgag aggtgtaatt ttcgctgtag
    25201 atactgtatg ccagatgagc cttttaaaga cgctggtcac agtaatgttt tgagctatga
    25261 ggagatgttt gagtttataa aaatatgtct tgataacggc gttaaaaaga tcaggcttac
    25321 aggcggggaa cctcttgtaa gaaaaggagt tgaaaacttt gtagccatga taaacggcta
    25381 taaatcagga cttgatctag cgatgactac aaacggttat tttttagcaa aaaaagcaca
    25441 agctctaaaa gacgccggac ttaagcgtat aaatatatct ttagatacgt tagataaaac
    25501 aaaagcccat tttattgcta gaaaagatgt tcttgataat gttatagaag gcattgaaac
    25561 agcatgcaat ttaggattcg gtgtaaagat aaataccgtt gctttaaaaa gcgtaaatga
    25621 caatgaattg atatatctta tggactttgc aaaagaaaaa ggcgctcaga tccgctatat
    25681 cgaatttatg gaaaattctc acgcctctag cgagttacaa gggcttaata aagatcaaat
    25741 tctagacatt atttctaaaa agtacaatat aaaagagata acaaaaagtc caaatagccc
    25801 atcgagtctt tttgaacttg aagacggtta taaattcggt ataatagacc cgcataaaca
    25861 tgatttttgt tctacttgta atcgcctaag actcagtgcc gaagggcttt tgataccgtg
    25921 cttgtactat gaagacggaa aaagtataag agaagcaatg agagcggggg atataaaaaa
    25981 agcttgtgaa attttaaatc aagttttggc tgataaacct gaaaaaaaca aatgggaaaa
    26041 tgacggtaaa ggtgagatat ctagccgtgc attttaccaa acaggcggct gatggtaaat
    26101 gtagtcgagt attttaccag cgttcaaggt gaaggtaaat ttagtggtcg ctactcgctt
    26161 tttatccgcc ttgggggatg caacctttct tgtaaaggtt ttggcgtcaa aataaaatcc
    26221 ccaaaaacag gcgagatatt agttgggtgc gatacgatca aagcagtgca gacagagcat
    26281 tttgagcata ataaatttga ttttgaagct cttgtaaatt tagtaaaaga aacggagttt
    26341 aaaccactca tcgtaataac tggcggtgag ccgctacttt ggtataaaga tgaagatctg
    26401 atcaaattta tacagtggtg ttttgagcaa aattacgaag tgcattttga aacaaacggc
    26461 agcatttttg ttgattttga taaatttaaa gtgtataaaa agtgtaaatt cgcagtaagc
    26521 gtgaagttgg caataagcgg cgagccaaaa tctaaaagaa taaaccaaaa agccttacaa
    26581 gctatctttg ctaacgcaga tgcgttttat aaatttgtga tttgtagaag tgagcttggc
    26641 gagataaacg agatattaga gctacaaaac ggcgaagttt ggtgtatgcc tttaggaaaa
    26701 aatatatccg aactaagtaa aaacgctaag agagtagctg agttttgtat taaaaacggc
    26761 tttaattact ccgacagact ccatgtgcgc ttatggaacg acaaagaagg cgtgtaatta
    26821 gctaacgaaa taggctttgt ctttttagag tttctttgca agtggcgata tttatcttat
    26881 caaagtaagc ttaacactcc aaaagtatct gttttgcggc tctgtagtcg atattgccat
    26941 gctctccgac gattaaattt ctttgcttaa aacgttcgct tattaaattt gcaacgcatg
    27001 ctttatccat accgagttca gttaaagtag tagctattcc ggtgctttta aaaaagtttt
    27061 cgatctcgtc tatgcagctt tttgccacgc ttatctcatc tccatccagc ccaaaaactt
    27121 cgcgtcccat tttggctaat ttagcttttt taaactcgag attatatctt aaaagtctag
    27181 ttgtaacgac agctaaacta agtccgtgat ccaaaccata aaccgcactt agctcatgac
    27241 ctatggcgtg acttgaccag tcgctagtac atcctacact acaccagcca tttagtgcgc
    27301 aagtcgccgc ccagcataaa ttcgctcttg cgtcatagct ttgcggatcg tttatggtga
    27361 tttttgcgtt ttttatcacg gtttttatca ccgcaaaaca aaaaccgtct tgtacatcgg
    27421 tatttagatc cacagttgca tactgttcta gtatatgtac gaaagtatca actataccgt
    27481 tttgaatttg ggctagcgga aggctaaaag ttgtttttgg atctatgatg ctaaacttag
    27541 gatataaaag ctcgtttcta aagcttcttt ttatctttaa actatcattg gatataactg
    27601 aaacgcagtt catctcgctt ccagtagccg gtaagctcat cacgcagcca agcggtaagg
    27661 ctttatcgaa atatgctctt ttgcttacta tatcccaagg atctccatca aatttagccg
    27721 cagcggctat aaatttagtg gcgtccaaaa cacttccgcc tccaacgcta agtaagaaat
    27781 ctataccatc acgctttatt aaatttacag cttttaaaca agtttcgagt ttaggatttg
    27841 gctctatccc ccaaaactcg cttacgttat gtttatttag agcatttttt acttgttcat
    27901 atataccgtt ttttcttacg cttccaccac cgaaaataat tagtatcttt aaattctcag
    27961 gcaataaatt tgaaagctta ggtatcgtgt ctttcccaaa aactatcttt gtaggacact
    28021 caaaactaaa attattcata ttaaagctcc tgatatttat ataaaatttg tacgattata
    28081 tcttaagtta atgaaagatt aggtaaaata taagcaaaaa cagtgagcaa ctatgattat
    28141 tagaaaaatg tatgactatg aaaatgccca tatagtaagg ttttgcagct ctaaaagatg
    28201 tcgcgaaagt ctgcatggtc atagttataa atgtgaggta atgttaagct caaattatct
    28261 tgataatgca gaaatggtgt atgattttgg tttgatgaaa caaggaatta aaactataat
    28321 cgacagtttt gatcatacca caactctata ttcaaaagat gacattgagt ataaaaatga
    28381 tataaaaaag tattctaaaa ggtggataga gcttccttat aatccaagcg ccgagcagtt
    28441 tagcagagta tttttcgtgc ttatagatag gcttttagga cttactgtga tgagaaatgg
    28501 cgagagagaa gtgaaacttc atagcattat cgttcatgaa acggctagcg gatatgctca
    28561 gtgtttttat gaagatgctt ataatccaaa tatgggtata ataaatttag aagatatagt
    28621 atttagccaa ggtattatag aagagtggaa agacgcgatg ttttacgata agttaaaaaa
    28681 cggtattaaa tttataaatc caaaggagtg ctgatgaagt ttgtatggct atttgcggct
    28741 tttatcctgt ttttatcggg ctgctcaaac gaggagcaaa aaccggttca gaatgtagtt
    28801 tctgaaactc cgcctccaga tgtgcctata gcaaaaagtg acgcgaatat aaatatagat
    28861 aaagatttcc cgccagcgcc agtagcagag taggcaaata tgggagaaac ttatgaaatg
    28921 agtacgtggc tgcatcttag ttttattaag atattgctag ggcttttaat tttgcatatc
    28981 gttttggttt ttgtaggcga tacatctaag ttttcgtata taaaaagact tatgtatttt
    29041 ttgcctacct attatgtttt tttggctttt atatttttta cgggcgtatt aaatttagct
    29101 attttacatt ttagtattag ttttagcgta gtttttatga tagtgtgctg gatagctttg
    29161 ataccttttg gggctgccgg atttaagaga ttaaaacgag ttcgcatcac aaaagaattc
    29221 tccaaattta agaaatttat gatattt
//
LOCUS       DAPPKW010000011        27372 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.011, whole genome shotgun sequence.
ACCESSION   DAPPKW010000011 DAPPKW010000000
VERSION     DAPPKW010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 27372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27372
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.011"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(65..1261)
                     /locus_tag="RPW04_000475"
     CDS             complement(65..1261)
                     /locus_tag="RPW04_000475"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002951609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDX6294593.1"
                     /translation="MYLFTSEVVSPGHPDKCADIIADSIVDAILKQDPNGRVASEVFV
                     AGKHIVIGGEVNAKVDFTHQDYRNIVKNTLKDIGYNGNPHFTRSQCLHPDDLEVDVFL
                     NQQSPDINQGVDQSSGEIGAGDQGIMFGFASSETENFMPSAITYARILCDKVYDYALK
                     NPDKLGVDIKTQVTIDYGSKSNFENCKPQSIHTIVVSAPSVENLQIEEVRTLIQGLID
                     DAGLPKELYNKEKTIIYINPTGRYVNHSSLHDSGLTGRKLIVDSFGGYSPIGGGAQSS
                     KDYTKVDRSGLYAARWIAKNIVAAGLAKKCIVQLSYAIGVAKPVSISVDCMGTNSSID
                     DEKLSEFVHESFALTPRWITEKFGLDKPSTDTFLYAKVAANGQVGVASYPWEKLDAVE
                     IFKKLK"
     gene            1421..2650
                     /gene="sstT"
                     /locus_tag="RPW04_000476"
     CDS             1421..2650
                     /gene="sstT"
                     /locus_tag="RPW04_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HDX6294594.1"
                     /translation="MGMFTKLTKSYTDGNLIIQILIGITIGGILGFIAHKSSVEAAIV
                     VNAASMLGNLFVGALKAVAPILVFILVASSIIIKEFGQANGLKNIIILYLVGTFLASL
                     SAVVVSFIFPTTLVLQNTSNALASAPQSIIVVLKDLVFKMVDNPVHAISSGNYIGILT
                     WAIGTGIALRHSSIETKKIFKDISEGITRIVKFIIKLAPFGIFGLVATSVAEAGFEAI
                     GGYAKLLLVLVGTMLFVAFVVNAAIVYFVTKQNPYPLIMTCIKESAVTAFFTRSSAAN
                     IPVNMSLCKKLNLDEKLYSISIPLGATINMAGAAVTIAVLSLSAVNTLNIQVGFLDAL
                     LLSIIAAIGACGASGVAGGSLMLIPLACSLFGISNDIAMQVVAVGFIIGVVQDSIETA
                     LNSSTDVLFTAIASQKS"
     gene            2737..4449
                     /locus_tag="RPW04_000477"
     CDS             2737..4449
                     /locus_tag="RPW04_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002810209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HDX6294595.1"
                     /translation="MMQWDLTLFFKNSDELDKFSKNLEKKAKNFNQKYSKNLEQLNDS
                     EFLASIQEYENILAGINKIMSYAYLKFAKDTTNGSFLAKYEEICTKIEENLLFFTIEF
                     NEISKEQQDSFIAYSRPYSYYLSLIAKQKSHQLSFLEERVLLRTANTGANAFSRLFDE
                     SMARLKFDFRGLVLSEEEILSKMLDSDRSVRKDAALSLSKTLEQNKHILTYIYNMIKT
                     DLKNECELRNYELAESSRHESNQIEKQSVDALIKATESSFDLVSKFYHKKRELLGYEK
                     LYDYDRYAPLNNESEFNYEEAKEIILKAFNSFNPLFAKLAKRAFDENWCDVYPAKNKQ
                     SGAFSHSASSDTHPFVLLNYTNKRRDLFTVAHELGHAIHQFLSYKVGFLNSNTPLTTA
                     ETASVFCEMLVFEYVKNRTSDTKLSGLLAGKIEDIFSTLYRQINFTTFERRVHAFEGE
                     ISNENLNDIWYEESKKMFGDSLVLNDYYKIWWSYIPHFIHSPFYCYAYSYAQLLVLAL
                     FGLYKSGKCENFVEIYTEFLSLGGSRSPKDMVAMFGFDINKEEFWQIGLDEVRNLVNE
                     FISI"
     gene            4459..4902
                     /locus_tag="RPW04_000478"
     CDS             4459..4902
                     /locus_tag="RPW04_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294596.1"
                     /translation="MIENILKDEKFGTLMKTHVYECLEYLLSKDTEFCILANLKYTSF
                     DPELPKEISSNFKSPVILFCLGGYTLSSAILTKTNLSFEAGFGANDFASLVSVPIGAI
                     VQITIDENPLLINFSVYKEDLNESRKQKSKQIFMSNPKNKDIFKK"
     gene            complement(4892..5764)
                     /locus_tag="RPW04_000479"
     CDS             complement(4892..5764)
                     /locus_tag="RPW04_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDX6294597.1"
                     /translation="MVSDFNKIYTFMAIVKERSFSKASKVLGISQPAVTLQIKKLEEI
                     LQATLIMRKKNGIILTKEGEKFYKLCLKFEGSMFRFKEEANHIKDEKTPIVVATNALI
                     GETILPIMLDQICEVVDSELDVKITDHSNLLSYLLDRRCDFCMMQERIYNDQLIFKKL
                     LEYEIVLVSNLKTDSHIGVNDLSKHKFIKDKTKTFLSSYFDQFGIKYDEFDTIYNLDG
                     SVATRCAMLHNKTREYYAFLPKFMIENDLENEELFLVNIDGIKIIRQLFIAGLSDSED
                     MLDRLGKINFNVIS"
     gene            5998..8055
                     /locus_tag="RPW04_000480"
     CDS             5998..8055
                     /locus_tag="RPW04_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HDX6294598.1"
                     /translation="MDNLLDSLNKSQKEAASHIDGAMLILAGAGSGKTKTITTRLAYL
                     ISVVGIDPLNTLTLTFTNKAASTMKHRALSMLNSNISSSPLLCTFHKFGLLFLKFYIN
                     ELGRKNSFVIIDTDDKKKIIKEFESSVAASVISNEISKYKNLLLSVEDVISSSKLNAE
                     NQFMKTNYEKIAKAYKLYEEYLAANNLVDFDDLLALTYKILLNNNDLANEISNRYKYI
                     MVDEYQDTNDLQYKLLRKLCECHENLVVVGDDDQSIYGWRGAKIENILNFKDQFNNVK
                     LIKLEENYRSTPSILKAANELIDHNRSRLGKQLFSTKKDEYPIQIIENGDENIEARVI
                     AGQIQKLLGSGVKADEIAILYRVNALSRSLEDGLNKARIPYKMVGGVKFYERMEIKDI
                     ISYLRLILNPNDDFSLNRIINRPKRGLGKVSLAKLEKFAYENKTSIYNAIYMIDDDTI
                     GKKLRVVLLDFANELKELSSLAPNNLLANLEKSFGIKEYYKNLPDGVDRVANIDEFYA
                     LIKDQIQNDESFALEEFLNELALESEQDRISDDAISIMSVHASKGLEFEHLFVIGLEE
                     GFFPLIGDGSDIEEERRLAYVAITRAKSGLNLSFSNSRFYKGQRARLNKSRFLSETGL
                     CEGSLKLETSNEFKKGDLIKHKIFGIGRVMEITKIKSEFKLKINFAGNIKEIMSSFVE
                     KVV"
     gene            8052..8888
                     /gene="truB"
                     /locus_tag="RPW04_000481"
     CDS             8052..8888
                     /gene="truB"
                     /locus_tag="RPW04_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDX6294599.1"
                     /translation="MKDNRLFVANKPSGISSNHFLSRLKRKYGVKKAGFSGTLDPFAN
                     GALIIAFGAYTKLFNYLEKTPKTYVATLWLGANSQSLDNENIRSVCKLKPFAMDSIDI
                     VMKDLQGKITYVPPKFSAKKIDGKRAYALARNGEEFEMKSSVMEIFNVKLIHYCHPFL
                     SFEISLSEGAYVRSWANLFAKRLGVDGTLSALRRVSEGRFKFENEKALDPLEFLNLAQ
                     NSYLGNEDNIKDGKKLDINEFQIKTDGTYYLIFDNFFSIIKIENGAVSYCLNKVEYAY
                     TN"
     gene            8872..9099
                     /gene="csrA"
                     /locus_tag="RPW04_000482"
     CDS             8872..9099
                     /gene="csrA"
                     /locus_tag="RPW04_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HDX6294600.1"
                     /translation="MLILTRKDGESIKIEGNIEIKVIQTLKNGVKIGIEAPKNVMILR
                     SELINEIANSNLKASLVNKNSLNELSKKFQK"
     gene            9096..9836
                     /locus_tag="RPW04_000483"
     CDS             9096..9836
                     /locus_tag="RPW04_000483"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDX6294601.1"
                     /translation="MRSYAKLNIFLKITGFRGNYHEIRSRFILFKGIFDEIEFVKKTS
                     DEFIQNDKIQNNIIKKARMELEKLGFKNELDEFFKFNQVKLTKNIPIGGGLGGGSGNA
                     AAFLNLANDNLNLNIPKEKLIQISKNIGADVPFFLSGFNSANVSGIGEIVSVFDDDIP
                     KIDIIKSKIFCSTKDVFSRCKKYFSKFDTDLALNLEKLSSKEILNSYKNYELNDLLKP
                     CIKLYPDLKISQNEFLSGSGSTKFRLSI"
     gene            10049..10504
                     /gene="smpB"
                     /locus_tag="RPW04_000484"
     CDS             10049..10504
                     /gene="smpB"
                     /locus_tag="RPW04_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDX6294602.1"
                     /translation="MSKDLARNKKAFHDYAILETFEAGIALKGSEVKALRAGRANLKD
                     SFVRIIRGELFLLNAHISYLDTTNSYFRPDERAPRKLLMHRRQIDKLFGKVSTDGLTM
                     VALSLYLNSKNIVKANIALAKGKNLHDKREALKQKEANIEARSALKKYI"
     gene            10522..11118
                     /locus_tag="RPW04_000485"
     CDS             10522..11118
                     /locus_tag="RPW04_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDX6294603.1"
                     /translation="MKKLTLILTFLTLFLVGCSTQKEEETTSFTPYKTGDEIELTSVI
                     GSKTTLVRTQNGFKLKDSDKIVMIDIFGTYCVPCQKEAPHLMDYQLKNSDDFMIIGLI
                     YFENIDDKGIVENFSKKYNAYYFISNSKENPRIVDQILHDIDYKRALQIPFKVVLKNG
                     VYQTLSDTLGDSKTNKFYLGEVSTAVISKDVSRIKSAN"
     gene            11177..11407
                     /locus_tag="RPW04_000486"
     CDS             11177..11407
                     /locus_tag="RPW04_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adaptor ClpS"
                     /protein_id="HDX6294604.1"
                     /translation="MLLNDEVTTMDFVVMILIDIFNKSKNEAIELMLKIHQSGRAICG
                     IYTKEIAQTKQMEVLNLAKANGFPLKCVIEEE"
     gene            11407..13605
                     /locus_tag="RPW04_000487"
     CDS             11407..13605
                     /locus_tag="RPW04_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDX6294605.1"
                     /translation="MIQNNLAKSIKQANELAISKSHEYIGVEHILYALTFDTEFLKTL
                     SSLGVSDPVALRNDLVGLIDQFPRLESPKPPVLTYKLSEILSSIKEEEIFDAEDFLEE
                     ILEDKSSSAYQVLKFHGLNDEQDDTSQFVSNLNDMVKNSKIDPVIGREEEIQKALEIL
                     CRHKKNNPIFVGEAGVGKTAIVQGIVQKIVNGKVPDRLKNSIIFNLDVSSLIAGAKYR
                     GEFEERLKSIISKLKENKNHIIFIDEIHSIMSQNSSNENSLDVANILKPHLANGDIRC
                     IGATTYSEFRNFNKDKALLRRFNKIDVSEPNPDECFLILKGLKSTYEKFHNVTYSDEI
                     LKLSIELAKRYLSDKFLPDSAIDIIDETGAKLSIANPNKLNLKDETVWSYAINVDDEF
                     DNLEAIKNEAEKNNSKKRVLKSDILNTVSKMANISNLNENSDNTKILKNLKANLKAKI
                     FGQDSAIDALNDALISSYAGLNEPNKPIGIFLFTGSSGVGKSELANELANSLNVHFER
                     YDMSEYMEKHSVSRLIGAPPGYIGFESGGLLTNMVKKHPYSVILFDEIEKANDEMINI
                     FLQIFDSASLTDNSGNKSDFKNTIIIMTSNLGTKEPNTLGFNKNLSDKTDKAVKGFFS
                     SEFRNRIDKIIRFNDLSKDILEKIVEKEISNLEKMAKKIKINLSKKALNEIINQGFSD
                     EYGARNLKRVIKDSINSSISKELLFGSLKRGGEVYIEFDGEFKFDFKANK"
     gene            13602..14456
                     /locus_tag="RPW04_000488"
     CDS             13602..14456
                     /locus_tag="RPW04_000488"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3298 domain-containing protein"
                     /protein_id="HDX6294606.1"
                     /translation="MRLLLLLSVMFGLIFGVNFNGEFIYAANKNYQIYIHDFGINGLV
                     KGCGDDNDDEKIDLNSYIFYVGNKKYYGKKEGREIHFAPIAVVSYNDSNVTVKMLLKK
                     TDIPIIKKMDIDAISYYDENTCYIKSEFRTDKDTNETELSAQKQANFSSLSYIIYLDE
                     NITTYQTFVSNFNGVHPTFHIINRVVDANASAFDIRSVYDLNKTELIEKLKNRLLTKF
                     KIDNNITNDDDAKAEFFDFDAIEFNDNFAITKNEISFYYSQCELLPCINDGISVSFDF
                     KELENYKK"
     gene            14453..15115
                     /locus_tag="RPW04_000489"
     CDS             14453..15115
                     /locus_tag="RPW04_000489"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HDX6294607.1"
                     /translation="MKSKFPNPKQAPKDAPLALGGDLSADTLLDAYKNGIFPWFMNGE
                     NILWWSPDPRAVFYPDSVKIHKSIKPFLRDYKVKFDTDFKKLITLCKTQREKTEPTWI
                     SQDIITAYSNLYDLGWAHSVEVYKNDELIGGLYGIIIGKIFCGESMISIKPNASKVGL
                     IKLCEALRPFDFLIDAQVMNSHLKFMGAKSLARERFLDELKEKISKKSGFNSFKDLNL
                     EN"
     gene            15161..15601
                     /gene="flgB"
                     /locus_tag="RPW04_000490"
     CDS             15161..15601
                     /gene="flgB"
                     /locus_tag="RPW04_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002946578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HDX6294608.1"
                     /translation="MYAGFSTSKSKQLVEAALEGRVLRQKLIASNIANIDTPFYKSKD
                     VDFESALIAKKNEIYSKNSGEPKLELAVTNEKHFPALDFPSNKQATIYLRDGHTARND
                     ANTVDLDVETTELGKNALMVQALDSASKKHGEIFKSVIDASGKL"
     gene            15611..16105
                     /gene="flgC"
                     /locus_tag="RPW04_000491"
     CDS             15611..16105
                     /gene="flgC"
                     /locus_tag="RPW04_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HDX6294609.1"
                     /translation="MAYLSDFDISGYGLSAQRFRMNVISSNIANANTTRTAEGGPYRR
                     REVIFKAIEFDKELNKSINSKNDFLKNENPLNDPDAPEFPKPALMSVVVDKIVRDDKD
                     FKLKYDPTHPDADAKGYIMLPNINPVIEMADLIEATRAYQANVSAFQSAKSIATSAIE
                     LLKG"
     gene            16109..16396
                     /gene="fliE"
                     /locus_tag="RPW04_000492"
     CDS             16109..16396
                     /gene="fliE"
                     /locus_tag="RPW04_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HDX6294610.1"
                     /translation="MNISEISNLNQTTEQTKQKDGAGSGFSDMLNKALSDLNDVQEKA
                     DKAVADLATGEVKDLHQAAIAIGKAETSMRLMLEVRNKAINAYKEISRTQL"
     gene            16396..18216
                     /locus_tag="RPW04_000493"
     CDS             16396..18216
                     /locus_tag="RPW04_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDX6294611.1"
                     /translation="MSGYQSQSKIYVIFSFIVLGIILFLFVIFYRALLDRKLPKLQSS
                     DFDSALRGSIISKDGFSIASSQKLYKAMVDTRNIDPNKKELFIKLYTLYSGDDPTKIR
                     KILSKKGVVTLSYEIDAKGAAYLKELARKLYKKKVFIAYQDPKTGIVATQGMSIVESG
                     EKRIYMAEDTLTPAIGYIKKIEQDGITKVEGVKGIEKVYDNLLSSTQDAITKGPRDLS
                     NTIILSGDAELSKRIDGYNVVLNTPLKLQKVIEQMATQKLNDLIAKEVVIGVMESKTG
                     KIIALVSTSRYNPSNITINDYQSLNSTASEYAYEVGSVMKPVIFSLLLRENKVNPLEI
                     INTYGGKYKLGQRTITDSHKNDFLSAEDIIVESSNVGMIQLVERLSEIDLYNGLLDFG
                     FSKKTGVDLSYEQVGLLPSINELRNKTYKSTVSYGYGLQATFMQLLNAYNTINNNGVM
                     ITPQIASHLEKNGKIYAIKEQDIKTILPIETAKIMKRILIKVVESNKGTARKARIQGL
                     SIGGKTGTAHIATSGGYSDKRYNASFFGFVNDISGNNYTIGVLVREPMKPYPYYYASW
                     SALPIFKNTVELMVENGYLKPAIASPKIDQNEQDNRDILD"
     gene            complement(18208..19152)
                     /locus_tag="RPW04_000494"
     CDS             complement(18208..19152)
                     /locus_tag="RPW04_000494"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDX6294612.1"
                     /translation="MKKVVILLNMGGADDLSQVELFLKNMFNDPYILGIKNRKIRSVL
                     AWLITKMRLKSATRNYTELGGKSPIGDITRSLIDKLNIKFGNENLTFDYAMNYTPPFA
                     IDSLKKYKYADEILLFPLYPHHSRTTIVSSLDSANRAIKELSIKSNIKVINYFYKDER
                     YNKIITSSIKEKIAEMNSSQIDLIFSSHSLPKKIIEKGDLYETHTNEHVKIISDMLAK
                     DGVKFNSISLAYQSRLGPVEWLGPNLSEVLSNLKSKKALIYPISFCIDNSETDFELDI
                     EYRKIADQKEFDYYEVVKAPDDSEAFVDYIAYKVKELV"
     gene            complement(19310..20947)
                     /gene="groL"
                     /locus_tag="RPW04_000495"
     CDS             complement(19310..20947)
                     /gene="groL"
                     /locus_tag="RPW04_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344612.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDX6294613.1"
                     /translation="MAKEIIFADDARNRLYSGVKKLNDAVKVTMGPRGRNVLIQKSFG
                     APSITKDGVSVAKEIELKDTIENMGAGLVREVASKTNDEAGDGTTTATVLAHAIFKEG
                     LRNITAGANPIEVKRGMDKFVEAVTSELKSAAKKVDGKKEIAQVATISANSDSSIGDL
                     IAEAMEKVGKDGVITVEEAKSINDELNVVEGMQFDRGYLSPYFITNAEKMQVELSSPF
                     ILLFDKKITNLKDLLPVLEQIQKTGKPLLIVAEDIEGEALATLVVNKLRGVLNISAVK
                     APGFGDRRKAMLEDIAILTGGEVISEELGRTLESASLQDLGQADRVVIDKDNTTIVNG
                     AGDKDSIEARINQIKAQIAETTSDYDKEKLQERLAKLSGGVAVIKVGAATETEMKEKK
                     DRVDDALNATKAAVEEGIVVGGGAALIKAGNRVNLSLKGDELIGAEIVKRALFAPLRQ
                     IAENAGFDAGVVANSVSCADCPNYGFNAASGEYVDMFEAGIIDPVKVERIALQNAVSV
                     ASLLLTTEATVSEIKEDKPAMPPMPDMGGMGGMGGMM"
     gene            complement(20965..21228)
                     /gene="groES"
                     /locus_tag="RPW04_000496"
     CDS             complement(20965..21228)
                     /gene="groES"
                     /locus_tag="RPW04_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009293641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDX6294614.1"
                     /translation="MKFEPLGKRVLVEREEEVKTTASGIIIPDNASKEKPSKGKVVAA
                     SKEAEGVSVGDIVVFAKYAGSEISLEDKKYLVLNLEDILGVIK"
     gene            21445..23994
                     /locus_tag="RPW04_000497"
     CDS             21445..23994
                     /locus_tag="RPW04_000497"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294615.1"
                     /translation="MRVLLWILGIIAVLFISAYTILFTSFGNSLIKPYVEKIATQKSG
                     MKIELKKFKVGLSKADIQAAINSELNLTVTGSYNLIKKNFDLNYTAQTRSLNSFGIDI
                     KDNISLNGDMIGNLNNFVVNGAGILVGSNMRFAIRIVNLKPLELKLDAKSLNLAQIST
                     IALHKPYIIGHLDATADISYANNGYQGDANLNIKKANTNNELIQNDFNISLPSNFFIT
                     AKSDIKLSGDIATAKTVIKSPIAVAAALNSVYNISNNKLNTDLNLNIPDLLKLEPLIK
                     QSLKGEITLNANTQIDANKLSFLDARIKGLGGIVIAKLKDNKIDADIKNIKLDELLKI
                     ASLPAIADGSINGIADINDINIPSKTNGSANLKITNSKLKSNELNKLINTEIKKDIPF
                     TGDAKAIFQDGILNLNSILSSEILRVDKFHSIYNLDSKDANASLQMSIPSLNALGNLT
                     GKTLNGSAELNAEAVIKATKLDNLSLNIKAMDGVINANLKNNTLKANIKDILAENLFV
                     LIGQKPLFDGVLNAELNLDSIDIKNLNGKGVINLNNATLNAANLKEMTKKDFPNNIKF
                     RAEFKPTFTNSIAYFMSNLSSNLINIDKFEGSFDINKLALDATYLANISDISKFEFLI
                     GKKLIGSLNANGKAQYKDTLYLTLNSDLLKSKLKSELKNGILTLNLDKFSVQELLKMA
                     DYDPFYEGISNLNAKYDLNGAKGNFKIDLLEGKLAKSGLTNAISIALNQDITEEVFKD
                     GYVKGDINKDIITFNAQMSSPKSDVNVTKGSINMLNSKIFIPIDTNIEKTDLQIEVSG
                     TTKEPKYAFKSSYLKTKIEKEMDRGLKKLFNSDENKTNDAKDIIKGLKNLF"
     gene            complement(24002..24586)
                     /locus_tag="RPW04_000498"
     CDS             complement(24002..24586)
                     /locus_tag="RPW04_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HDX6294616.1"
                     /translation="MDTIIKDLKIVPLENSKFVKPFSILYTQDNKNKRWDCVEAHDSV
                     SCIMYHKDFDAFLFVKQFRPSLWYYQTKNSISSDEPGVTHELCAGIMDKGLSAEETMI
                     EEILEETGYAVQEVKKITSSYTALGFGANRQTLFCTTIDESMKKTAGGGVDDEKIEIV
                     FIKKSDILDFIYDENMVKAPNLQFSVLWYLQNMF"
     gene            complement(24571..25932)
                     /gene="mgtE"
                     /locus_tag="RPW04_000499"
     CDS             complement(24571..25932)
                     /gene="mgtE"
                     /locus_tag="RPW04_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HDX6294617.1"
                     /translation="MNKDLDEVKEQLEKHLDDGVGGELSPSDIASHLKVLKSHDEDEY
                     ATYLEKLDSQSLGEVAMEMPDHMLKDVIENVPNNKIVEALEELESDDATDLLQNIEDI
                     DEEKAKELFSSLELDSQKEISKLINYEDNEAGAYMQTELFSARLDERLSSAISRFRVM
                     KKRDEIENVFQLFVVDKDGVLKYVIPLEDLIIYDFDLNLENIIKNGGVDKYKPHFATD
                     TDDISEVAATVMDYDLSAIAVVNKAGVLIGRITTDDIHDFLEESATEQIYNLAGVNDE
                     AEEEGLVKTGRARAIWLFVNLITAIFSVSVIGLFDKSIESLVALAMLMPIVAGIGGNA
                     GNQTLAVNVRRLALGEIQFDSFWSVLKKELIMASVNSIIFASFVGFLVGLWFNMPLLG
                     VVIGVAMIINLLLAAFFGTFIPLTFKRIGLDPAVGSSVFLTMITDMMGFFVFLGLATW
                     ILL"
     gene            complement(25941..27107)
                     /locus_tag="RPW04_000500"
     CDS             complement(25941..27107)
                     /locus_tag="RPW04_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDX6294618.1"
                     /translation="MIKKIILFLFITINLYAIKPSVEELTWPNGESFLTFLENNKIPL
                     SLYYNLEKEDQELATEITSGTRFQILRDENDRVSQVLIPISEELQIHIHKDIVGKYVI
                     DFIPIIYENEDRILSIDVQRSPYQDIIEHSGNVALASAFLNAFKGSVDYKGLKKGDKL
                     VIIYTQKRRLGRVFGMPNIKAAMIEIRGNAKYVYQYDDRFYDETGKELENFFLIKPVK
                     NARISSRFTPKRWHPILKRYRAHLGIDYAAPKGTKIYAAGDGRISFVGQKGGYGNVIM
                     LNHTDNYMTLYAHLNGFASGVKSGKRIKKGDVIAYVGSTGMSTGPHLHFGLYKNNQAI
                     NPESVVKITKSSLSGTQKKEFSALVGGINRDFEVSLNAHTNAPKEEGFDSVIAF"
BASE COUNT         9986 a         4396 c         4430 g         8560 t
ORIGIN      
        1 gctagaaagt tttaaatttg agccgtttta taaatttagg tctcaaattt aaaaccggaa
       61 ttgtttattt taatttttta aaaatttcaa ccgcgtccaa cttctcccac ggataactag
      121 caactccaac ttgtccatta gcagccactt tagcatataa aaaagtatct gtgctaggtt
      181 tatctagtcc gaatttctcc gttatccatc taggagttag agcaaaactc tcatgtacaa
      241 actctgataa tttctcatca tctatactgc tatttgtacc catacaatct actgagatac
      301 taactggttt tgctacacct atagcgtaac ttagctgaac gatgcatttt ttagcaagtc
      361 ctgcggcgac tatatttttt gctatccatc ttgctgcgta aagtccacta cgatcgactt
      421 tcgtatagtc tttgctactt tgagcgccgc ctcctatagg agagtatccg ccaaagctat
      481 ctactattag ctttcttccg gttaatccgc tgtcatgaag cgaactatga ttcacataac
      541 gtccggttgg atttatataa ataatcgttt tttctttatt gtaaagctct tttggaagcc
      601 ctgcatcatc tatcaagcct tggatcaaag ttctaacttc ttctatttgc aaattttcaa
      661 cgcttggagc gcttactact atcgtatgta tggattgagg tttgcagttt tcgaaatttg
      721 attttgaacc ataatcgatt gtaacttgag ttttgatatc aacgcctaat ttatccggat
      781 ttttaagagc gtaatcataa actttatcgc aaagtattct agcgtaagtt atcgctgatg
      841 gcataaaatt ttctgtttcg ctagatgcaa atccaaacat aattccttga tccccggcac
      901 ctatttcacc actgctttga tctacgcctt gatttatatc cggactttgc tgatttaaaa
      961 acacatcaac ctcaagatca tcaggatgta ggcattgaga tcttgtaaaa tgtggatttc
     1021 cgttataacc gatatctttt aaagtatttt ttactatatt tctataatct tgatgagtaa
     1081 aatcaacctt agcatttact tcgccgccta ttacaatgtg ttttccagcg acgaaaactt
     1141 cacttgcaac gcgaccattt ggatcttgtt taaggatcgc atcaactata ctatctgcta
     1201 tgatatcggc acatttatca ggatgacccg gacttactac ttcacttgta aataggtaca
     1261 ttatttatat tccttattca atttaatttg ggattgattt tagcatacat aatttgaaat
     1321 aaacattaat ctatatttcg cttaaaacag tataaattta attttgcttt aataacaatg
     1381 taaatataat agccatttat ctcaaatcaa aggtttaata atgggaatgt tcacaaaact
     1441 aaccaaaagt tatacagatg gaaatttaat aattcaaata ttgataggaa taacaattgg
     1501 aggaatttta ggatttatag ctcacaaaag tagtgtagaa gccgcgatag tggtaaatgc
     1561 agcatctatg ttaggcaatt tatttgtagg agctttaaaa gccgtagcgc ctattttggt
     1621 atttatactt gttgcttcgt cgataataat aaaagaattt gggcaagcaa atgggcttaa
     1681 aaatattatt attttatatc ttgttggcac gtttttagct tctctctcag cagtcgtggt
     1741 tagttttata tttccaacaa ctctagtttt gcaaaacact agcaacgcct tagcatcagc
     1801 accccaaagc ataatagtag ttttaaaaga tctagtattt aagatggtag ataatccagt
     1861 tcacgctata tctagcggaa attatatagg gatacttaca tgggcaatcg gtactggtat
     1921 agctcttaga cactcttcta tagagactaa aaagatattt aaagatataa gtgaaggcat
     1981 aacaagaata gttaaattta taataaaatt agcaccgttt ggtatatttg gacttgttgc
     2041 tacaagcgtt gcagaagcag gatttgaagc tataggcgga tatgcaaaac tacttttagt
     2101 cttagtagga actatgcttt ttgtagcatt tgtagtaaat gcggctatag tatattttgt
     2161 aacaaaacaa aatccatatc cactcataat gacttgcata aaagagagcg cagttactgc
     2221 attttttact agaagcagcg cggcaaatat acctgtaaat atgagccttt gtaaaaagct
     2281 aaatttagat gaaaaactct actctatatc gattcctttg ggcgcaacta taaatatggc
     2341 gggagctgcc gtgaccatag ctgttttatc gctaagcgca gtaaatacgc taaatatcca
     2401 agtaggcttt ttagacgcgc ttcttcttag cataatcgct gctataggag cgtgcggagc
     2461 tagcggagtt gctgggggat cgcttatgct tattccgctt gcttgttctt tgtttggcat
     2521 aagcaacgac atagctatgc aagtagtagc agtcggcttt ataataggag tcgttcaaga
     2581 ctctatcgaa actgcattaa atagttcaac agacgtgcta tttacagcta ttgcatctca
     2641 aaaatcataa aaatagtccc aaatttatgt atctggttgc acaaatttct attattagat
     2701 tttttttgtt ataattttac tttttaaaaa aggataatta tgcaatggga tttaactcta
     2761 tttttcaaaa atagtgatga gcttgataag ttcagcaaaa atttagagaa aaaagcaaag
     2821 aactttaatc aaaaatatag taaaaattta gaacaattga acgatagcga gttcctagcc
     2881 tctatacaag aatatgagaa tattttagct ggtataaata agattatgag ctatgcttat
     2941 ttgaaatttg ctaaagatac tacaaacggc tcttttttag caaaatatga agaaatttgt
     3001 acaaaaatag aagaaaattt gctatttttt actattgagt tcaacgagat atcaaaagag
     3061 cagcaagaca gttttatagc ttattcaaga ccttatagtt actatcttag tcttatagca
     3121 aagcagaaat cgcatcaatt aagttttctt gaagaaaggg ttcttttaag aacagcaaat
     3181 accggagcaa atgcattttc aaggcttttt gatgaaagta tggcaaggct taagtttgat
     3241 tttagaggtt tagtcttaag cgaagaagaa attctatcga aaatgctaga cagcgataga
     3301 agcgtaagaa aagacgcggc cttatctctt agcaaaactc ttgagcaaaa taaacacatt
     3361 ctaacatata tttataatat gataaaaaca gatctaaaaa acgagtgtga gctaagaaat
     3421 tatgaacttg cagaatcaag cagacacgag agcaatcaaa tagaaaagca aagcgtagat
     3481 gctctcataa aagcaactga atctagcttt gatcttgttt ctaaatttta tcataaaaaa
     3541 agagagcttc taggatacga gaagctttat gattatgata ggtatgcgcc tcttaacaat
     3601 gagagcgaat ttaactatga agaggcaaaa gagataattt taaaagcttt taactctttt
     3661 aatccacttt tcgcaaaact tgcaaaaaga gcttttgatg aaaactggtg tgacgtatat
     3721 ccggctaaaa ataaacaaag cggcgctttt tcgcattcag cctcaagcga cactcatcca
     3781 tttgtactac taaattatac aaacaaaaga cgcgatcttt ttaccgtagc tcatgagtta
     3841 gggcacgcaa tacatcagtt tttaagctac aaagttggat ttttgaactc aaacactcct
     3901 cttactacag ccgaaactgc ttccgtgttt tgcgaaatgc tagtgtttga atatgtaaaa
     3961 aacagaacca gcgatacaaa actatctgga ttgttggcag gtaaaataga agatattttt
     4021 tctactttat atcgtcaaat aaattttacc acattcgaaa gacgagttca tgcttttgaa
     4081 ggtgaaattt ctaatgaaaa tttaaatgat atttggtatg aagagtctaa aaaaatgttt
     4141 ggcgatagtc tggttttaaa cgattattat aaaatttggt ggagttatat acctcatttt
     4201 atacattctc cgttttattg ttatgcatac agctatgctc agttgcttgt gcttgctcta
     4261 tttggactat ataaaagcgg aaaatgtgaa aactttgtag aaatttatac tgagtttttg
     4321 agccttggcg gaagcagaag tccaaaagac atggtagcaa tgtttggatt tgatataaat
     4381 aaagaggaat tctggcaaat aggacttgat gaagttagga atttagtaaa tgagtttata
     4441 tctatttagg ggaaaaatat gatcgaaaat attttaaaag acgagaaatt cggcactctt
     4501 atgaaaactc acgtttatga gtgtcttgag tatcttctta gcaaagatac ggagttttgc
     4561 atacttgcga atttaaaata cacttcattt gatccggaac ttccaaaaga gattagttct
     4621 aattttaaat ctccagttat actattttgt cttggcggat acacactttc aagcgctata
     4681 ctaacaaaaa ccaatcttag ttttgaagcc ggattcggag ctaatgattt tgctagctta
     4741 gttagtgttc ctataggagc tatagtacaa ataacaattg atgaaaatcc tcttttaatt
     4801 aacttttcag tatataaaga ggatttaaac gagagtagaa aacaaaaatc aaaacaaatt
     4861 tttatgtcaa atccaaaaaa taaagatata tttaagaaat aacgttaaaa tttatttttc
     4921 ctaatctatc gagcatatct tcgctgtcgc ttaatccagc tataaatagc tgtctgataa
     4981 tcttaatgcc gtctatattt actaaaaaca actcttcgtt ttctaaatca ttttctatca
     5041 taaatttagg caaaaaagca taatactctc ttgttttatt atgaagcatg gcacaccttg
     5101 tagctacaga tccatctaga ttataaatag tgtcaaactc atcatatttt ataccaaatt
     5161 gatcaaaata cgagcttaga aacgtttttg tcttatcttt tataaattta tgcttactaa
     5221 gatcatttac gccgatatgt gaatctgttt ttaaatttga aaccaaaact atctcgtact
     5281 ccaaaagttt cttaaaaatg agttgatcat tataaattct ctcttgcatc atacaaaaat
     5341 cacatcttct atctagtaga taagatagta gattactatg atctgttatc ttaacgtcta
     5401 gttcgctatc tacaacttcg catatctgat ctaacattat aggcaagatt gtttcaccta
     5461 taagtgcgtt tgtagcaact acaataggcg ttttctcgtc ctttatatgg ttagcttctt
     5521 ctttaaacct aaacatagaa ccttcaaact ttaaacagag tttgtagaat ttttcacctt
     5581 cttttgtaag tattattcca ttcttttttc tcatgatcaa agttgcttga agtatctctt
     5641 ctagcttttt gatctgaagc gtgacggccg gttgggatat acctagcacc ttggaagctt
     5701 tagaaaaact tctttcttta actatagcca taaaagtata gattttatta aaatcactaa
     5761 ccataaaaaa ccccttcaga tgttgttgta gtaacattat attacaccaa tctgaattta
     5821 tttttaaatt taatcttttt tagtttaatc attattatta attaatttat ttaccaattt
     5881 gtgtatctta atgtaacaaa tatatacaaa atgaattaga tttatatccg aattcattaa
     5941 aaactttaaa agttttagta tgatataatg attaattaaa ttagataaag cgatactatg
     6001 gataatctac tagactcttt aaacaaaagc caaaaagaag cagcctcaca tatcgatggc
     6061 gctatgttaa tattagcagg agctggaagc ggcaaaacta agactattac aactagacta
     6121 gcttacttaa tcagcgtagt tggcatagac ccgttaaata cattaaccct aacatttaca
     6181 aataaagcag caagcactat gaaacaccgc gccttgtcta tgttaaactc aaatatcagc
     6241 tcatctccgc ttctttgtac ttttcataaa ttcggtcttt tgtttttaaa attttatata
     6301 aatgagctag gtagaaaaaa tagctttgtc attatagata cggatgacaa aaaaaagatt
     6361 ataaaagagt ttgaaagtag tgttgccgcc tcagttatat caaacgaaat ttcaaaatac
     6421 aaaaatctgc ttttaagcgt agaagatgtt ataagtagct caaaactaaa cgcagaaaat
     6481 cagtttatga aaacaaatta cgaaaaaata gcaaaagcat acaaactata tgaagagtat
     6541 ttagccgcaa acaatcttgt ggattttgac gatcttttag ctcttacata taaaatttta
     6601 ctaaataata acgaccttgc aaatgagatt tcaaatagat ataaatatat aatggtagat
     6661 gagtatcaag acacaaacga ccttcagtat aaactactaa gaaaattatg cgagtgtcat
     6721 gaaaatctag tagtagtagg cgatgatgat caaagcatat atggctggcg cggtgcaaaa
     6781 atagaaaata ttttaaattt caaagatcaa tttaataacg tgaaattaat caaacttgaa
     6841 gaaaactacc gctctactcc gtccatctta aaagctgcaa atgagcttat agatcataat
     6901 cgctcaaggt tgggaaagca gctatttagt actaaaaaag acgaatatcc gattcaaatc
     6961 atagaaaacg gcgatgaaaa tatagaagca agagttatag cgggtcaaat tcaaaaatta
     7021 ttaggatctg gtgtcaaagc agatgaaata gcaatattgt atagagtaaa cgctttgtct
     7081 cgtagccttg aagatggttt aaataaagct agaattccat ataaaatggt gggcggagtt
     7141 aaattctatg agagaatgga gataaaagat ataattagct atttaagact tatattaaat
     7201 ccaaacgatg atttttcttt aaaccgcata ataaaccgac caaaaagagg tcttgggaaa
     7261 gtaagccttg caaagcttga aaaatttgct tatgaaaata aaacgtctat ttataacgct
     7321 atatatatga tagatgatga tacgatagga aaaaaattga gagtcgtttt attggatttt
     7381 gcaaatgagt taaaagagtt aagctcatta gctccaaaca atctgctagc aaatttagaa
     7441 aaaagttttg gtataaaaga gtattataaa aatttacccg acggggtaga tagagtagca
     7501 aatatagacg agttttatgc gcttataaaa gatcaaatac aaaatgatga gagttttgct
     7561 ttagaagagt ttttgaatga gctagcttta gaaagtgagc aagatagaat aagcgatgat
     7621 gcgatatcta ttatgagcgt gcatgcgagc aaaggacttg agtttgaaca tctttttgtt
     7681 atagggcttg aagagggatt ttttccactt attggcgatg gaagcgatat agaagaagag
     7741 agaaggcttg cttatgtagc tataactaga gcaaaaagcg gattaaatct ttcattttca
     7801 aactcaagat tttacaaagg tcaaagagca agactaaata aatcgagatt cttaagtgaa
     7861 acaggacttt gtgaaggttc gcttaaactt gaaactagta atgagttcaa aaaaggcgat
     7921 ctcatcaaac ataaaatttt tggtatcggc agagttatgg agataacaaa aataaaatct
     7981 gaatttaaat taaaaatcaa cttcgcagga aatataaaag agataatgtc gagtttcgtg
     8041 gaaaaagtcg tatgaaagat aatcgtcttt ttgtagcaaa taagccttct ggaatttcaa
     8101 gcaaccactt tttaagcaga ttaaaacgca aatacggcgt aaaaaaagca ggattttcag
     8161 gtacgcttga tccttttgca aatggagctc ttatcatagc ttttggagct tatacaaaac
     8221 tgtttaacta tctagaaaaa actccaaaaa cttacgttgc cactctttgg ctaggagcaa
     8281 actcgcaaag cttagataat gaaaatataa gaagcgtatg taaattaaag ccatttgcta
     8341 tggatagtat tgatattgta atgaaagatt tacaaggcaa aatcacctac gtacctccta
     8401 aatttagtgc taaaaaaata gacgggaaaa gagcctacgc ccttgctaga aacggtgagg
     8461 aatttgaaat gaaaagttct gttatggaaa tttttaacgt aaaacttata cattattgtc
     8521 acccgttttt aagttttgaa atttcactta gcgagggcgc ttatgttaga tcttgggcaa
     8581 atttatttgc taaaagactc ggagtagatg gcactctaag cgcattaaga agagttagcg
     8641 aaggacgatt taaatttgaa aatgaaaaag ctttagatcc gcttgagttt ttaaatttag
     8701 cacaaaatag ttatcttgga aatgaagata atataaaaga cggcaagaaa ctggatataa
     8761 acgaatttca aataaaaaca gatggcactt attacttaat ttttgataat ttttttagca
     8821 taataaaaat agaaaatggt gctgtttctt actgtttaaa taaggtagaa tatgcttata
     8881 ctaactagaa aagacggcga aagtatcaaa atagaaggca acatagagat aaaagtaatc
     8941 caaacgctaa aaaatggtgt aaaaatcggt atagaagcgc caaaaaatgt tatgatacta
     9001 agaagcgaac ttataaatga aatagcaaat tcaaatttaa aagctagttt ggtaaataaa
     9061 aactcactaa acgaacttag caaaaagttt caaaaatgag aagttacgct aaattaaata
     9121 tatttctaaa aataactggt tttagaggaa attaccatga aattcgatca agatttatac
     9181 tgtttaaagg tattttcgat gagattgaat tcgtaaaaaa aaccagcgat gagtttatac
     9241 aaaatgacaa aatacaaaac aatattatta aaaaagcaag aatggagcta gaaaaactcg
     9301 gatttaaaaa cgagcttgac gagtttttca aatttaatca ggtaaaactg acaaaaaaca
     9361 ttcctatcgg cggcggactt ggaggcggaa gcggaaacgc cgcagcgttt ttaaatttag
     9421 caaatgataa tttaaattta aatataccaa aagaaaagct aatccaaata agtaaaaata
     9481 taggagcgga cgtaccattt ttcttaagcg gatttaacag tgcaaatgta agcggaatcg
     9541 gtgaaatagt gtctgtattt gatgatgata tcccaaaaat agacatcata aaaagtaaaa
     9601 tattctgctc tactaaagac gtttttagca gatgcaaaaa gtacttttct aaatttgata
     9661 ctgatttagc actaaattta gaaaaactaa gctcaaaaga gatattaaat tcatataaaa
     9721 attatgagtt aaacgatcta ttaaagccat gcattaaatt atatccggat ttaaaaatat
     9781 ctcaaaacga atttcttagc ggaagtggaa gtacaaaatt taggctatct atatagatat
     9841 atttttgagc ttttgtttta aatttaaaat attattttga tatactcatt aaactgtaat
     9901 aatatatgag tattatactt aataaacagc tgaaaatatc gttttataga gtttaaatca
     9961 gcttgaatca tatattttat ttaacaaaat tttagactaa tctgctataa ttataataat
    10021 ttaaaagaaa attatcaaag agagttttat gtccaaagat ctagcgagaa ataaaaaagc
    10081 attccacgac tacgccatat tagagacgtt tgaagcaggg atagcattaa aaggtagtga
    10141 agtaaaagct cttagagcag gcagagcgaa tcttaaagat agctttgtgc gcatcataag
    10201 aggagaactg tttttactaa atgctcatat aagctatcta gatacgacaa actcatactt
    10261 cagaccagat gaaagagctc ctagaaaact gcttatgcat agacgccaga tagataaatt
    10321 atttggaaaa gtcagcaccg atggacttac tatggttgct ttatcgctgt atctgaacag
    10381 caaaaatata gtaaaagcca acattgctct tgcaaaaggt aaaaatctgc acgataaaag
    10441 agaagcctta aaacaaaaag aggcaaatat cgaagcaaga tctgctttaa aaaaatatat
    10501 ttaaatttaa aaggaatata aatgaagaaa ttaacactta tacttacatt tttaacactg
    10561 tttttagtcg gctgctctac tcaaaaagag gaagaaacaa ctagttttac tccatacaaa
    10621 acaggagatg agatagagct aactagcgta ataggatcaa aaacgactct agttagaacg
    10681 caaaacggat ttaagttaaa agatagcgat aaaatagtaa tgatagatat ctttggtact
    10741 tactgcgttc cttgccaaaa agaagcgccg catcttatgg attatcagct taaaaacagc
    10801 gatgatttta tgattatcgg acttatatat tttgaaaata tcgatgataa aggcattgta
    10861 gaaaacttct ctaaaaaata caatgcgtac tattttatat caaattcaaa agaaaaccct
    10921 agaattgttg atcaaatttt acatgatata gattataaaa gagcgcttca aattccattt
    10981 aaagtagtat taaaaaatgg agtatatcag actttaagcg acactttagg agatagcaaa
    11041 acaaataaat tctacctagg tgaagtttct actgcagtta tcagcaaaga tgtaagcagg
    11101 ataaaaagtg caaactaaaa aaagcagtat cacaaagact aaaataaaag attttaagcc
    11161 taacttgttt aaagtaatgc ttttaaacga tgaagttacg actatggact ttgttgttat
    11221 gatacttata gatattttta ataaaagtaa aaatgaagct atagaattga tgttaaaaat
    11281 ccaccaaagc ggcagagcaa tatgcggtat atacacaaaa gagatagcac aaactaaaca
    11341 gatggaagtt ttaaaccttg caaaagcaaa cggttttcca ctaaaatgcg ttatagaaga
    11401 agagtaatga tacaaaacaa cttagcaaaa tcaataaaac aagcaaatga gcttgccatt
    11461 tcaaaatctc acgaatatat aggagttgag catatacttt acgctcttac ttttgatacg
    11521 gagtttttaa aaactctttc gtctttagga gttagcgatc cagtagctct gagaaatgat
    11581 ttagtaggac ttatagacca gtttccaaga ctagaatctc caaagcctcc tgttttaaca
    11641 tataagttaa gcgaaatttt aagcagcata aaagaagagg aaatttttga cgccgaggac
    11701 tttttagagg aaattttaga agataaaagc tcaagcgcat atcaagtact taaatttcat
    11761 ggtttaaatg atgaacaaga cgatacaagt caattcgttt cgaatttaaa cgatatggta
    11821 aaaaactcaa agatagatcc tgttatagga cgcgaagagg agatacaaaa agctcttgaa
    11881 atactatgcc gccacaaaaa aaataatccg attttcgtag gagaagcagg agtaggtaaa
    11941 acagcaatag tgcaaggaat agttcaaaaa atagtaaacg gcaaagttcc ggacagacta
    12001 aaaaatagca ttatatttaa tctcgacgtt agttctttga tagccggcgc aaagtataga
    12061 ggagagtttg aagagagatt aaaaagtata atttccaaac tcaaagagaa caaaaatcat
    12121 ataatattta tagatgaaat tcactcgata atgtctcaaa atagttcaaa tgaaaatagt
    12181 ctggatgtag caaatatatt aaaaccgcat cttgcaaacg gcgatataag atgtatagga
    12241 gctacaactt atagcgagtt tagaaatttt aacaaggata aagccttact tagaagattt
    12301 aataaaatcg atgttagcga gccaaatcca gatgagtgtt ttttgatact aaaagggctt
    12361 aagtctactt acgaaaagtt tcacaacgta acttatagcg atgaaatttt aaagcttagc
    12421 atagagcttg caaaaagata cttaagtgat aaatttctac cagacagcgc tatagatatc
    12481 atagatgaaa ccggagccaa actaagcata gctaatccaa ataaattgaa cctaaaagat
    12541 gaaacggtgt ggagctacgc gattaacgtt gatgatgaat ttgataactt agaagccata
    12601 aaaaatgaag cagagaaaaa taattctaaa aaaagagttt taaaatctga catactaaat
    12661 accgtatcaa aaatggcaaa tatatcaaat ttaaatgaaa atagcgacaa cactaaaatc
    12721 ttaaaaaatt taaaagcaaa tttaaaagca aaaatatttg gtcaagatag cgctatagat
    12781 gcgttaaacg atgctcttat ctcatcttac gccggattaa acgaaccaaa taaaccaatt
    12841 ggaatatttt tatttacagg aagtagcggt gtaggaaaaa gcgagttggc aaatgagttg
    12901 gcaaactcat taaatgtcca ttttgagaga tacgatatga gcgaatatat ggaaaaacac
    12961 agcgtttcaa ggctcatagg agcacctcct ggatatatag gatttgagag cggcggatta
    13021 ctaacaaata tggtaaaaaa acatccttac agcgttatac tatttgatga aatagaaaaa
    13081 gctaatgatg agatgataaa tatattctta caaatttttg atagtgcaag tctcactgac
    13141 aatagtggaa ataaaagcga ttttaaaaat actattatta taatgacatc gaatttaggc
    13201 acaaaagagc caaatactct tgggtttaac aaaaatttaa gcgataaaac agataaggcc
    13261 gtaaagggat tttttagctc tgagtttaga aatcgtatag ataaaataat acgatttaat
    13321 gatctcagca aagatatttt agaaaaaata gttgaaaaag aaatttcaaa tttagaaaaa
    13381 atggctaaaa aaataaaaat aaatttaagt aaaaaagcat taaatgagat tataaatcaa
    13441 ggatttagtg acgaatacgg agctagaaat ttaaagagag ttatcaaaga tagtataaat
    13501 agttctatct caaaagagct attatttggt agtttaaaac gcggtggaga agtatatatc
    13561 gagtttgatg gagagtttaa atttgatttc aaggcaaaca aatgagacta cttttacttt
    13621 tgtctgttat gtttggcttg atttttggag tgaattttaa cggcgagttt atatatgcgg
    13681 caaataaaaa ttatcaaatt tatatacatg attttggtat aaacggtttg gtaaaagggt
    13741 gcggagatga taatgacgac gaaaagatag atctaaacag ttacattttt tacgtaggca
    13801 acaaaaaata ttacggtaaa aaagaaggta gagagataca ttttgcacct atagcagtag
    13861 ttagctataa tgactcaaac gtaactgtaa agatgttatt gaaaaaaacg gatattccta
    13921 ttatcaaaaa gatggatata gatgcgatta gttattatga tgaaaatacg tgctatataa
    13981 aaagcgaatt tcgaacagat aaagatacaa atgaaacaga gttaagtgca caaaaacaag
    14041 caaatttttc atctcttagt tatattatct atcttgatga aaatataacg acatatcaaa
    14101 cttttgtgtc aaatttcaac ggagtccatc caacttttca tattataaat agagttgttg
    14161 atgcaaacgc gagtgcattt gatataagaa gtgtttatga tctaaacaaa actgaactta
    14221 tagaaaagct aaaaaataga ctacttacta aatttaaaat agacaataat atcacaaatg
    14281 atgacgatgc aaaagctgaa ttttttgatt ttgacgcaat agaattcaac gataattttg
    14341 ctataacaaa aaacgaaatt agcttttatt actcgcaatg cgaactttta ccgtgtataa
    14401 atgatggaat aagcgtatct tttgatttta aagaattaga gaactacaaa aaatgaaatc
    14461 aaaatttcca aatccaaaac aagcacccaa agacgctcct ttggcattag gtggcgatct
    14521 tagcgcagat actttattag acgcatataa aaacggtatt tttccttggt ttatgaatgg
    14581 tgagaacata ctttggtggt caccagatcc tagggctgta ttttatccag atagtgtaaa
    14641 aatacataag agtataaagc cgtttttaag agattataag gttaaatttg ataccgactt
    14701 taagaaactc ataactcttt gtaaaacaca aagagagaaa acggagccga catggataag
    14761 tcaagatatc ataacagcat actcaaattt atatgattta ggatgggcgc atagcgtaga
    14821 agtatataaa aatgatgaat taataggtgg attgtatgga atcatcatag gtaaaatatt
    14881 ttgcggagag agtatgataa gtatcaaacc aaatgcttct aaagtaggtc tgataaaact
    14941 ttgtgaagcg ttaagaccgt ttgactttct tatagacgct caagttatga actctcatct
    15001 taaatttatg ggggccaaaa gtttggcaag agagagattt ttagatgaat taaaagaaaa
    15061 gatatcaaaa aaatccggat ttaattcatt taaagatcta aatttagaaa attaggaata
    15121 aattttgctt attaaagact ataagttcaa ggagatatag atgtatgcag gtttttcgac
    15181 aagcaaatca aaacagctag tagaagctgc tctagaaggc agagtacttc gccaaaagct
    15241 tatagctagc aacatagcaa acattgacac tccgttttat aaatctaaag atgttgattt
    15301 tgaatcagcg ttgatagcta aaaaaaatga aatttatagc aaaaactcag gagagccaaa
    15361 acttgaactt gcagtaacaa acgaaaaaca ttttccggct ttagattttc ctagcaacaa
    15421 acaagcaaca atctatttaa gagacggtca tacagcaaga aatgatgcga ataccgtcga
    15481 tcttgatgtt gaaacaacag agcttggaaa aaatgctcta atggttcaag cgcttgattc
    15541 agcaagtaaa aaacacggtg agatatttaa aagcgtaatt gacgcaagcg gtaaattata
    15601 aggataaacg atggcatatt taagtgattt tgatataagc ggatacggtc ttagcgcaca
    15661 acgttttaga atgaatgtta taagttcaaa cattgcaaat gctaatacga caagaactgc
    15721 tgaaggaggt ccttatcgtc gcagagaagt tatatttaaa gctatagaat ttgataaaga
    15781 gttaaacaaa tctataaatt caaaaaatga ctttttaaaa aatgaaaatc cattaaatga
    15841 tccagatgct ccggaatttc caaaaccggc tcttatgagt gtcgtagtag ataaaattgt
    15901 tcgagatgat aaggacttta aactaaaata tgatccgact cacccagacg cagacgcaaa
    15961 aggttatata atgctgccaa atattaatcc cgttatagaa atggccgatt taatagaagc
    16021 aacaagagct tatcaagcaa atgtttcagc atttcaaagc gcaaagagta tagcaactag
    16081 cgcaatagag ttactaaaag gataatttat gaatatatct gagatttcaa atttaaatca
    16141 aacaacagag cagactaagc aaaaagatgg tgctggtagc ggcttttcag atatgctaaa
    16201 taaagcttta agcgacttaa atgatgttca agaaaaagca gataaagcag tagcagactt
    16261 agccacagga gaggtaaaag atcttcatca agcagctata gctataggaa aagcggaaac
    16321 tagtatgaga ttgatgttag aagtaagaaa taaagctata aatgcatata aagaaatctc
    16381 aagaacacag ttgtaatgag cggatatcaa agccaaagca agatctatgt aatcttcagc
    16441 tttatagttt taggaattat actattttta tttgtaatat tttatagagc tttgttagat
    16501 agaaagctgc caaagctaca aagtagtgat tttgatagtg ctcttagggg ctcaatcata
    16561 tcaaaagacg gttttagtat agctagtagt caaaaattat acaaagctat ggtggatact
    16621 agaaacatag atccaaacaa aaaagagctt tttataaaat tatacacact ctacagcggt
    16681 gatgatccaa ccaaaatcag aaaaatactt agcaaaaaag gcgtagtaac cttatcgtat
    16741 gaaatagacg caaaaggtgc agcgtatctc aaggagctag ctagaaaatt atacaaaaaa
    16801 aaggtattca tagcatatca agatccaaaa acaggaatag tcgcaactca aggtatgagc
    16861 atcgtagaaa gtggtgaaaa acgtatatat atggcagaag atactcttac tccagccatc
    16921 ggctacataa aaaagataga acaagacggt ataaccaaag tagaaggagt aaaaggtata
    16981 gaaaaagtat atgacaacct gctctcatct acgcaagatg cgattacaaa aggtccaaga
    17041 gatctgtcaa acactattat actatctggt gacgcagaac tctcaaaacg aattgacggg
    17101 tataatgtgg ttttaaatac tccattgaaa ctccaaaaag taatagaaca gatggcaaca
    17161 caaaagctaa acgatctcat agcaaaagag gttgttatag gagttatgga gagcaaaaca
    17221 ggaaaaatca tcgcattagt ttccacttca agatataatc catcaaatat cacaataaat
    17281 gattaccaat cattaaattc aaccgcaagc gaatacgctt atgaagtagg ttcggtcatg
    17341 aaaccagtca ttttctcttt gttacttaga gaaaataaag taaatccgct agagatcata
    17401 aatacatatg gcggaaagta taaactcggc cagagaacaa taacagatag tcataaaaat
    17461 gattttttaa gtgctgaaga tataatagta gaatcatcaa atgtgggtat gatacagcta
    17521 gttgagagat taagtgaaat agatctatat aatgggcttt tggattttgg attttctaaa
    17581 aaaacaggag ttgatctaag ctatgaacaa gttggattac ttccatctat aaacgaactt
    17641 agaaataaaa catacaaatc tactgttagt tatggatatg gacttcaagc cacatttatg
    17701 caacttttaa atgcttataa cactataaat aataatggag ttatgataac accgcaaatc
    17761 gcaagtcacc tagaaaaaaa cggtaaaata tatgctataa aggagcaaga tatcaaaact
    17821 attttaccta tagaaactgc taaaattatg aaaagaatac ttataaaagt cgtcgaaagc
    17881 aacaaaggca cagctagaaa agcgcgtata caaggactta gtataggtgg aaaaaccgga
    17941 accgctcaca tagctacaag tggaggctat agcgataaac gatataatgc aagctttttt
    18001 ggatttgtta atgatataag cggaaataac tatacaatag gcgtattagt aagagagcct
    18061 atgaaaccat atccttacta ttacgcctca tggagcgctt taccgatttt taaaaacacc
    18121 gttgaattaa tggtagaaaa tggttattta aaaccggcta tagcatctcc taaaatagat
    18181 caaaacgagc aagataacag agatatatta gactaactct ttaactttat aagctatata
    18241 atcaacaaaa gcttcactat catcaggagc tttcacaact tcatagtagt caaactcttt
    18301 ttgatctgct atttttctat actcgatatc tagttcaaaa tccgtttctg agttatctat
    18361 acaaaaacta atcggataaa taagtgcttt tttgcttttt aaatttgata aaacttcgct
    18421 taaattcgga cccagccatt caacaggccc caatcttgat tgataagcta aactaataga
    18481 attaaactta actccatctt tagccaacat atctgaaatt atttttacat gctcattagt
    18541 atgagtttca tacaagtcgc ctttttcgat tatttttttc ggaagtgaat gagatgaaaa
    18601 tatcagatcg atttgacttg aattcatttc agcaatcttt tcttttatac tacttgttat
    18661 aattttatta tatctttcat ccttataaaa atagtttata acttttatat tagattttat
    18721 actaagctct tttatagctc tatttgcgga atccaaacta gatactatag tagttcttga
    18781 atgatgagga tataatggaa atagcagtat ttcatcggcg tatttatact tttttaaact
    18841 atctatagca aaaggaggcg tatagttcat agcataatca aaagtaagat tttcatttcc
    18901 gaatttaata tttaatttat caatcaaaga tctagtgata tctcctatag gagatttgcc
    18961 gcctaactcc gtatagttgc gtgttgcact ttttagtctc attttagtta taagccaagc
    19021 tagcactgag cgaatttttc tattttttat acccaaaata tatggatcgt taaacatatt
    19081 tttcaaaaat agctcaactt gacttaaatc atcagctccg cccatattta gtagtattac
    19141 aacttttttc atatattctc cttgaatcgt attttatcat aaatgttcaa aataaatata
    19201 aaattgtgtt aaataaaagt agcataaaat agtaaaaata gcataaattt aaaagtataa
    19261 aaataaaaaa gtataaaagc aaaccccaaa aaggagtctg ctttagggct tacatcattc
    19321 cgcccattcc acccataccg cccatgtctg gcatcggagg catagcaggt ttatcctctt
    19381 ttatctcact aaccgtagct tcagtagtaa gaagtaagct tgctacgcta actgcgtttt
    19441 gtaaagctat tctttctact ttaacaggat ctataattcc agcttcaaac atatcaacat
    19501 attcgccgct agctgcgtta aatccataat tagggcaatc tgcgcatgat acagaatttg
    19561 ccactactcc agcgtcgaat ccggcatttt cagctatctg acgaagaggg gcaaaaagcg
    19621 cacgtttaac tatctcagcg ccaattaact catcaccttt taagcttaga tttactctat
    19681 ttccggcttt gataagcgct gcaccgcctc cgactacgat gccctcttct actgctgctt
    19741 ttgtagcatt tagagcgtcg tctactctat cttttttttc tttcatttct gtttctgtcg
    19801 cagctcctac tttgataaca gcaacaccgc cgcttaattt agctagtctt tcttgcaact
    19861 tttctttatc ataatcgctt gtagtctcag ctatttgagc ttttatttga ttaattctag
    19921 cttctatcga atctttatct ccggcaccat ttactatagt agtgttatct ttatctataa
    19981 caactctatc tgcttgacca agatcttgta agctagcact ctctaaagtt ctgcctaatt
    20041 cttcgctgat cacttcaccg ccggttaaaa tagctatatc ttcaagcata gcttttcttc
    20101 tatctccaaa tccaggagct tttactgctg aaatatttaa aacgcctctt aatttattta
    20161 caactaaagt tgcaagagct tcaccctcga tatcctcagc aacgataaga agaggttttc
    20221 ctgttttttg aatttgttct aaaaccggaa gtagatcttt taaatttgta attttcttat
    20281 caaataaaag tataaatgga ctacttaact cgacttgcat tttttcagcg tttgtgatga
    20341 aatacggact taaatatcca cgatcaaact gcataccttc aacgacattt aactcgtcat
    20401 ttatagattt tgcttcttct actgtgatga caccgtcttt accaactttt tccatagctt
    20461 cggctataag atcaccgatt gagctatcgc tatttgctga aatagtagct acttgagcta
    20521 tctctttttt accgtctact tttttagcgg ctgattttaa ctcgcttgta acagcctcaa
    20581 cgaatttatc cattccgcgt tttacttcga taggatttgc gccggcagtt atgttcctaa
    20641 gtccttcttt aaatatagcg tgagctaaaa ctgtagcagt tgtagtaccg tctcctgctt
    20701 catcgtttgt tttgctagca acttctctga ctaaacctgc acccatattt tctatagtat
    20761 ctttaagttc tatctctttt gcaacgctta cgccgtcttt tgtgatagaa ggtgcaccaa
    20821 agcttttttg gataagtaca ttacgacctc ttggtcccat agtaactttt accgcatcgt
    20881 ttaatttttt tacaccgcta tataatctat ttcttgcatc atctgcgaaa ataatttctt
    20941 ttgccattgt tttgctcctt taatttactt aattacgcct aaaatatctt ctaaatttaa
    21001 aactagatat tttttatctt ctaagctgat ctcgctgcca gcatactttg caaatacaac
    21061 gatatcacct acgctaacac cctcagcctc tttgctagct gctactactt ttccttttga
    21121 aggtttttct tttgaagcat tatctggtat aataataccg ctagcagttg tcttaacttc
    21181 ctcttctcgc tctactaaaa cacgttttcc aagtggctca aatttcatct cttgtccttt
    21241 cgtttatcaa atttttctct aaataattag cactcttacc ttttgagtga cgaaaatata
    21301 gcataatttt agttaaaagt caagatttaa agccaaattt atcataaaat tttagtctaa
    21361 ttggctcaag tttaaatact ttctctaaat atttcgtttc tttacaaata tattgtataa
    21421 ttataagaaa atacggagca aaatatgaga gttttactat ggattttagg cattattgca
    21481 gtattattta tatctgctta taccatatta tttactagtt ttgggaatag tctcataaag
    21541 ccgtacgtag aaaaaatagc aacgcaaaaa agcggtatga aaatagaatt aaaaaagttt
    21601 aaagtcggtt tatccaaagc agatatacaa gccgcgataa actccgagct aaacctaaca
    21661 gttacaggaa gctataatct gattaaaaaa aactttgatc taaactatac cgcacaaacc
    21721 agaagcttaa acagttttgg tatagatata aaagataata tatctttaaa tggagatatg
    21781 attggaaatt taaataattt tgtagtaaat ggagcgggaa ttcttgtagg ctcaaatatg
    21841 agatttgcca ttagaattgt aaatttaaaa cctcttgagt taaaactaga cgcaaaatct
    21901 ctaaatttgg cacagatatc gactatagcg cttcataaac catatataat aggacattta
    21961 gatgctacgg ccgatatatc gtatgcaaat aacggttatc aaggagatgc aaatttaaat
    22021 ataaaaaaag caaacacaaa caatgagctt atacaaaacg acttcaatat ttcacttccg
    22081 agtaattttt tcataactgc aaaatcagat ataaaactat cgggcgatat agctactgca
    22141 aaaaccgtga taaaatctcc gatagcggtt gcggcggcac taaactccgt atataatatc
    22201 tcaaacaata aactaaatac cgatttaaat ttaaacattc cagatctgct aaaactagaa
    22261 cctttgatca aacagtcttt aaaaggcgag ataacactaa atgcaaatac tcaaatagac
    22321 gcaaacaaac tatcgttttt agacgcacga ataaaaggtc ttggaggaat tgtaatagca
    22381 aaattaaaag acaataaaat agacgccgat ataaaaaata taaaacttga tgaactgctt
    22441 aaaatagcgt ctttgccggc aattgccgat ggaagcataa acggtatcgc cgacataaac
    22501 gatataaata ttccatcaaa aacaaacgga agtgcaaatt taaaaatcac aaactcaaaa
    22561 ctcaaaagta atgaactaaa caaactaata aatactgaaa ttaaaaaaga tataccattt
    22621 acgggagacg ccaaagcaat ttttcaagat ggaattttaa acttaaattc tatattaagc
    22681 tcagaaattt taagggtaga taagtttcat agtatttaca atcttgatag caaagatgca
    22741 aatgctagtt tgcaaatgag tattccgagc ttaaatgctc ttggaaactt aacaggcaaa
    22801 acactaaacg gttcagctga actaaacgct gaagccgtca taaaagctac caaattagat
    22861 aatctaagct taaatataaa agctatggat ggagttataa atgcgaattt aaaaaacaac
    22921 acattaaaag caaatatcaa agatatttta gctgaaaatt tgtttgtatt gatcggtcaa
    22981 aaaccgctat ttgacggtgt tttaaacgcg gaattaaact tagattccat agatataaaa
    23041 aatctaaacg gaaaaggagt tataaattta aataacgcga cgctaaatgc agccaattta
    23101 aaagaaatga caaaaaaaga ttttccaaac aatattaaat ttagagcaga gtttaaacct
    23161 actttcacaa attcaattgc atattttatg tcaaatttaa gttcaaattt aataaacata
    23221 gacaaatttg aaggaagttt tgatataaat aaattagctt tggatgcaac gtatttggct
    23281 aatataagcg atatttcaaa atttgaattt ttaatcggta aaaaattaat aggaagtcta
    23341 aacgcaaacg gtaaagcaca gtacaaagac actctttatc taactttaaa ctctgatctg
    23401 cttaaaagca aactaaaatc agagttgaaa aatggtatct taaccttaaa tttagataaa
    23461 ttttcggtac aagaacttct aaaaatggct gattatgatc cattttatga aggtatttcg
    23521 aatttaaatg ctaaatatga cctgaatgga gcaaaaggta attttaaaat tgatctttta
    23581 gaaggaaaac tagctaaaag cggacttaca aatgccatta gcatagcatt gaaccaagat
    23641 ataacagaag aagtctttaa agacggctat gtaaaaggag atataaacaa agatataata
    23701 acctttaatg cccaaatgag ctctccaaaa tcagatgtaa atgttacaaa aggaagtata
    23761 aatatgctaa actcaaagat atttatacct attgatacga atatagaaaa aacggatcta
    23821 caaatagaag tttctggaac tacaaaagag cctaaatatg catttaaatc cagctattta
    23881 aagacaaaga tagaaaaaga gatggataga ggcttaaaga aactatttaa ctcggatgaa
    23941 aataaaacaa atgatgcgaa agatattata aaagggctga aaaatctttt ttagccctta
    24001 gctagaacat attttgtaga taccaaagta cggaaaattg caaatttggg gctttgacca
    24061 tattttcatc ataaataaaa tctagaatat cagatttttt gataaatacg atctcgattt
    24121 tctcatcatc aactccacca ccagctgttt ttttcatact ttcatcaata gtagtacaaa
    24181 aaagagtttg tctattggct ccaaagccta atgccgtgta actgctagtt atctttttta
    24241 cctcttgaac ggcgtatccc gtctcttcta atatctcttc tatcatcgtt tcttcggcgc
    24301 tcaaaccttt atccatgata ccggcgcaaa gctcatgcgt aactcctggt tcatctgaac
    24361 ttatactatt ttttgtctga taataccaaa gagatggacg aaactgcttt acaaacaaaa
    24421 acgcgtcaaa atctttatga tacattatac aagatacgct atcatgagct tctacgcagt
    24481 cccagcgctt gtttttatta tcttgagtat ataaaatact aaatggcttt acaaactttg
    24541 agttctcaag cggtacaatc tttaaatctt ttataatagt atccatgtag caagtcctaa
    24601 aaatacgaaa aatcccatca tatcagttat catagttaaa aatacagagc taccaactgc
    24661 tggatctagc cctattcttt taaatgttag aggtataaat gttccgaaaa aagcggctaa
    24721 aagcaaattt ataatcatag ccacacctat tactactcca agtagaggca tattaaacca
    24781 aagtccaacc aaaaatccaa caaaagaagc aaatattata gaattaacag aagccattat
    24841 aagttctttt tttaaaacgc tccaaaaact atcaaattgt atctctccta atgcgagacg
    24901 tcttacattt acggctaatg tttgattacc ggcgttccct ccgatacccg ctacaatcgg
    24961 cataagcata gcaagagcaa ctaaagactc tatagattta tcaaataacc ctatcacgct
    25021 tacgctaaat atagcagtta tcaaatttac aaatagccaa atagcacgcg cacgacctgt
    25081 tttaactagt ccttcttctt cggcttcatc attaacacct gctaaattat aaatttgttc
    25141 agtagcgctc tcttctaaaa agtcgtgtat atcatcggtg gtgatacgac ctatcaaaac
    25201 tcctgcttta tttacaacag ctatagcact taaatcatag tccataacag tagccgcaac
    25261 ttcgcttata tcatctgtat cagtagcaaa atgcggctta tatttatcta caccgccatt
    25321 ttttataata ttttctaaat ttaaatcaaa atcatatatt ataagatctt ctaaaggtat
    25381 aacgtatttt aaaacaccat ctttatcaac tacaaagagt tgaaatacgt tttctatctc
    25441 atctcttttt ttcattaccc taaaacgaga tatcgcagaa cttagtcttt catcaagtct
    25501 agctgaaaaa agctccgttt gcatataagc accggcttca ttgtcttcgt aatttataag
    25561 tttgcttatc tctttttggc tatctaattc aagagagcta aaaagctctt tagctttttc
    25621 ctcatctata tcttctatat tttgtaaaag gtcggtggcg tcatcgcttt ctagctcttc
    25681 taaggcttct actatcttat tattaggaac attttcaatc acatccttaa gcatgtgatc
    25741 cggcatttcc atagcgactt cgccaaggct ttgagagtct aatttttcaa ggtaagtagc
    25801 gtattcatct tcatcatggc ttttcaatac ctttagatgc gacgcgatat ctgatgggct
    25861 taattcgcca ccgacgccat catcgagatg tttttctaac tgctctttta cttcatctaa
    25921 atctttattc ataactttac ctaaaatgcg attacgctat caaatccctc ttcttttgga
    25981 gcatttgtat gggcatttaa actaacttca aaatctctgt ttataccgcc aacaagcgca
    26041 ctaaactctt ttttctgtgt gccacttagg ctactttttg ttatttttac cactgattct
    26101 ggattgatag cttgattgtt tttataaagt ccaaaatgca ggtgcggacc tgtactcata
    26161 ccggtacttc ccacataggc tatgacatca ccctttttta tccttttacc gcttttaaca
    26221 ccgcttgcaa aaccgtttaa atgagcataa agggtcatat aattatctgt atgatttaac
    26281 ataattacat ttccgtaacc gcctttttgc cctacgaatg atattcgtcc atctcccgca
    26341 gcatatattt tcgtgccttt tggagcagcg tagtcaatcc ccaaatgagc cctatatctt
    26401 tttaaaatcg gatgccatct ttttggagta aatcttgagc ttattctagc atttttgaca
    26461 ggttttatca aaaagaaatt ttcaagctct ttcccggttt catcgtaaaa tctatcatca
    26521 tactgataaa catatttagc atttcctctt atttctatca tagcagcttt gatatttggc
    26581 ataccaaaaa ctcttcctaa ccgtcttttt tgagtatata taatgactaa tttatcaccc
    26641 tttttaagcc ctttataatc cacacttcct ttaaaggcgt ttaaaaaagc actcgctaaa
    26701 gcaacatttc cgctatgttc tatgatatct tgatatggtg atctttgcac atcgatacta
    26761 agaattctat cttcgttttc atatattatc ggtataaaat caataacata ctttccaact
    26821 atatctttat gaatatgaat ttgcaactct tcacttatag gtataagaac ttgtgaaact
    26881 ctatcatttt catctcttaa aatttgaaat ctcgtgccgc ttgttatctc agtagctagc
    26941 tcttgatctt ctttttccag gttataatat aaagataatg gtattttatt attttctaaa
    27001 aatgttaaaa aactctcgcc atttggccat gttagctcct caacactagg cttgatagcg
    27061 tataaattta tagtgataaa taaaaatagt attatttttt tgatcataaa atcgccttaa
    27121 aataaaatct cgtaattgta tcgtaatctt acttacataa tgcttctatt tatcaaaaaa
    27181 tatcatatta ttttcgctat aatttatata gtattaaaat aattttaagc aaaatatata
    27241 gttaaacgca ggataaagtt tttaaattta gatataaatt tatattttat ctctaaaggc
    27301 acttttaaat atatagtttt tatggatatt tgggttttgc aaaaaagtaa tccagtctat
    27361 ataaggtaat ct
//
LOCUS       DAPPKW010000012        26287 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.012, whole genome shotgun sequence.
ACCESSION   DAPPKW010000012 DAPPKW010000000
VERSION     DAPPKW010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 26287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26287
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.012"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..593
                     /locus_tag="RPW04_000501"
     CDS             <1..593
                     /locus_tag="RPW04_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDX6294619.1"
                     /translation="VKNRSVIYNPMFFNVDIDASKPEKENIIIFVGRLIKAKGCDVFL
                     EALSLIKYELKDWKILVLGDGDEILNLKNLAKNRNLNIEFCGMVNNISNYYKKAKILV
                     LSSRSEGLGNAFIEAIFYNILRVSTPTSGAKELIKDGFDGLISEDFSAESLSKKIKMS
                     LSGCDSLVENAKLRQSEFEIKNIYNRWLNLIKEAAN"
     gene            590..1630
                     /locus_tag="RPW04_000502"
     CDS             590..1630
                     /locus_tag="RPW04_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDX6294620.1"
                     /translation="MNIIFFISALRNGGAERVLQVLSSEFSKKHSVEVVYFEEDKKHY
                     EFLVKTTHLNIYHNTTILSKFKKFFTIRNFIKSKKPDLIISFMDQTNINLIISTMFMS
                     RTLIITEHVSHTLLKSKIWRFIRDFSYRFASGLTVLTKEDFEYYKFVKNRAIMHNPIF
                     HKPKNTKYYKESIILSVGRLETVKGYENYFKALSLIDKNILDKWDIIIAGNGSLENSL
                     KNLAINLNLKINFVGHQKDIGSLYERAKILALPSMNEGFGNVLIEALFYECARVSTPT
                     SGAKELIKDGFDGLISEDFSAESYAITLEKLLKNDGMCQNLVQNANLKKSKFEIENII
                     DKWYKFIKECEQ"
     gene            1627..2748
                     /locus_tag="RPW04_000503"
     CDS             1627..2748
                     /locus_tag="RPW04_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDX6294621.1"
                     /translation="MKKLSVFIYSMAGGGAERVVSNLLTELINSYEVHLILMNDRIFY
                     EIPKDVKIHYLENSEPFENGLWKLIKLPFLGLKYKKLCQNLGIDLHFVWMNRPCYIAG
                     FARIFGDKKPLILNECSTPSVLYKDSSLKSKISKFLLKKLYPKADFIYPNSIGNLNDL
                     RDNFDIDPKKMRVLYNALNLDEIREKSRDLIDEKEPFFLSVGRLDSGKNHELLIRSYA
                     NLKNCDKNLLILGEGVLKEHLQGVINELNLEGRVKLLGFDNNPYKYMSKCYAFVFVSL
                     FEGFSNALIEALACSKLVISSEHKSGARELLGDDKWGVLVQVNDEIATTKAMQKALDE
                     PDWVKIYEKNAIIRASFFDKRKIADELIKDLEEIYEKLG"
     gene            2732..5008
                     /locus_tag="RPW04_000504"
     CDS             2732..5008
                     /locus_tag="RPW04_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general glycosylation pathway protein"
                     /protein_id="HDX6294622.1"
                     /translation="MKNLGNFFMIFRSNTLFLIILAYIFSVICRFEWIYWASGYAEFF
                     WNNQLMISTNDGYAYAEGARDMIAGFHQPNDLSFYGTPLSSITYLLVEITPFSLETIM
                     VYLSVFLGGLVVIPIILMAREIGEIKAGFIAALLASIANSYYNRTMAGYYDTDMLIIS
                     LPIFTFWGIVRLYTKRDLKSFLIISFSMLIYSWWYPSSFSLNVAITLFFGLYTIIFDR
                     KNILNYQAVLFMILAISGAEYFIRAILILALFVFIKFKPNLINTKVMISLYAAVLLFF
                     IYFGGLNPIWFQLKFYIFRSVSDSDGVMFKYFNVNQTIMESGMIDFRFFAQRISGDIF
                     VFLIALIGYVLLCFKYRIFLVTLPMIGLGFLSLKGGLRFTIYAVPMMAFGFGYALNWI
                     SKFIKIDKKHRKISLYAVTFFSFLPVILLVLLQIYEGIYLDEFKFLFPIFVVAYILFY
                     FKFRREIATMVLFPLSLFALTPSLIHIYEYKPLTVFMNSEVKVLDKLKTIADPEDYVV
                     AWWDYGYAIRYYSDTKTLIDGGKHLGRENFAVSWALSRPFISSANMARLEVEYTERGF
                     EQKFNSNLNEMLKDYNASDVNGFLASLNDQNFTLPEKTRDIYYYLPDRMMGIFPVVTK
                     FSRLDLVTAKEFRDAFFIVSTSFAQGGDGVVLSEGITIANDGTKISFSGKTFRVNSYI
                     ETKYDKNMNLEKQIHHIDDNGGFYVVYMVDYGRFLIMDKEMFNSTYIQLFVLENYEGS
                     DYEPIILDPSAKVYKLKR"
     gene            5013..6125
                     /gene="pglA"
                     /locus_tag="RPW04_000505"
     CDS             5013..6125
                     /gene="pglA"
                     /locus_tag="RPW04_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_065842313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N,
                     N'-diacetylbacillosaminyl-diphospho-undecaprenol
                     alpha-1,3-N-acetylgalactosaminyltransferase"
                     /protein_id="HDX6294623.1"
                     /translation="MKIGFLSHSDLSIYYFRAPIMRALRDRGHKVFAIVPNGRYINKI
                     SSEFQTVIYDLDKASLNPFRVLKDTKDLANILKPLNLDMIQTAAHKSNVFGTFAAQKA
                     GIRHILNLVEGMGSFYTKSDIKTIVVRNVIEMLYKHAFSISDACIFVNDADPDYMLKK
                     GIIDSSKVRRIKSVGIDANEFDPSIVSAQEFGQKKVVLMVGRALFDKGIREFYEAADL
                     LSSRDDCKFVFVGDTYEGNASSASSLFLQNQNVTWIKWSDRIREILKGSYIYVLPSYK
                     EGFPRTVLEAMSMEKACVVSGCDGCLEAVKDGVNGLICKVKDSKDLASKIETLLDNEH
                     LVKKMGKNGRNLVLENYDEHIITKQYLEVYKEFIDV"
     gene            6118..6723
                     /gene="pglC"
                     /locus_tag="RPW04_000506"
     CDS             6118..6723
                     /gene="pglC"
                     /locus_tag="RPW04_000506"
                     /EC_number="2.7.8.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_038453985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl phosphate
                     N,N'-diacetylbacillosamine 1-phosphate transferase"
                     /protein_id="HDX6294624.1"
                     /translation="MYRAFFKRFLDFFGSLVLIFLTSPIMIWAYFAIKKRLGSPVIFT
                     QNRPGLGEKIFQIYKFRTMSDEKDENGKLLSDELRLGEFGKKLRSLSIDELPQLFNVL
                     KGDMSFIGPRPLLIQYLPLYNDEQKLRHTVRPGITGLAQVNGRNGISWAKKFEYDSYY
                     AKNLSFLMDLKIAFLTVKKVIKKDGISKEGMVTTEEFNGNN"
     gene            6732..7310
                     /gene="pglD"
                     /locus_tag="RPW04_000507"
     CDS             6732..7310
                     /gene="pglD"
                     /locus_tag="RPW04_000507"
                     /EC_number="2.3.1.203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_038453984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylbacillosamine N-acetyltransferase"
                     /protein_id="HDX6294625.1"
                     /translation="MKKIYIYGHSGHGKVVSEIAKLNGYGEIIFLDDASEFKFKKELP
                     KHDIIIAIGNARIRHKLQTMVLQNGFNVVNLIHPSAAISQSAKFGKGIVVMANAVVNA
                     NVILEDGVIINSGAIIDHDCFIGEFAHICPGVSLAGNVSVGKFSWMGIGSCAIQGVKI
                     KNDIMIGAGSVIVKDILIGDKAYGNPCKVVSK"
     gene            complement(7365..8462)
                     /gene="nusA"
                     /locus_tag="RPW04_000508"
     CDS             complement(7365..8462)
                     /gene="nusA"
                     /locus_tag="RPW04_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDX6294626.1"
                     /translation="MEKISDIIESIANEKGLNFEDVKERIIRAFVNAAKRLYGYECEY
                     EASLDPNTKAIHLYQKILVVEDSDERLDEEHFISLKKAHELDATLEIGDSLNYELNID
                     ELGRTGAGVLSREIEYHIQRLIEEKIYEKYNSKINTLVFGTVTRVDAEENTFVEIDEI
                     RAVMSMKNRIKNEKFKVGNVVKAVIKSVRLDKKDGIKVELSRTSPKFLEALLKAEVPE
                     IKDGGVIIQNSARIPGKKAKIALFSTTPNIDAVGATVGIKGVRINAVSSELNGENIDA
                     IEYSSEPAIFVARALAPAIVSSVKIDDKKAIVSLVPEQKSKAIGVSGINIRLASMLSG
                     FEIILHEIGAPTQEVSNEEGLKNLKALFGDM"
     gene            8664..8906
                     /locus_tag="RPW04_000509"
     CDS             8664..8906
                     /locus_tag="RPW04_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294627.1"
                     /translation="MELKLARTELDNKPKTISLDKIEAAIGKDGGKIFYFDKDNSHKE
                     LIALVEYFEERGLSVYHRTVRYGLDENDYMYEVHIL"
     gene            8903..10207
                     /gene="miaB"
                     /locus_tag="RPW04_000510"
     CDS             8903..10207
                     /gene="miaB"
                     /locus_tag="RPW04_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDX6294628.1"
                     /translation="MSVKKKLFIETLGCAMNVRDSEHIIAELSQKENYEVTNIIEDAD
                     LILINTCSVREKPVHKLFSEVGTYEKAKKKGAKIGVCGCTASHLGSEVFKRAPYVDFV
                     LGARNISKITTALNTPKFVSVDINHDESEYAFGDFRSSPYKSFVNIMIGCDKKCTYCI
                     VPQTRGDEISIPKDIILKEVRKAASSGAKEIFLLGQNVNNYGKRFSGTHENIDFSDLL
                     NLISEVDGVERIRFTSPHPMHMDDKFLKEFSTNPKICKSMHMPLQSGSNEILKAMKRG
                     YTKEWFLDRALKLREICSDVTISTDIIVAFPGESDRDFADTMSVVESIKFEQMFSFKY
                     SSRPLTPAASMTNQVNSDIASRRLSTLQARHTEILDEIVKAQKNSIHEVYFEELRANS
                     SVAGRTFNNFLVQTNGSEELLGKILKVKITDPKRMVLYGQII"
     gene            10191..10802
                     /locus_tag="RPW04_000511"
     CDS             10191..10802
                     /locus_tag="RPW04_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HDX6294629.1"
                     /translation="MVKSFKDKFFIKFVELSIISIMHIIYITCKKEFKGKSISKEPCV
                     ILFWHGKLVMLPFVFKKWWDTKNVKVMISDHKDGEMVNGVSYHFGIGTIRGSTTKGAL
                     KALLAAFRTIKEGADVAITPDGPKGPRHSISDGCVAIPQKMNVNIVILNYEASKFWQF
                     GSWDKMILPKPFSKITYTLSEPFSISGLSMDDAKALILSKMPN"
     gene            10869..11870
                     /locus_tag="RPW04_000512"
     CDS             10869..11870
                     /locus_tag="RPW04_000512"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294630.1"
                     /translation="MASWIRKFLSTLYVSAVIKDNQCYTYARAIKNGKIIKNLEAVFD
                     CTDGRVDIKFNEYLKKRESEYHSVYLSVLLNSPKQWAIPAVSKQDFSKFAIQYNSVDI
                     VAVDNNWSIVVPKGEIAAFDSSLNRADADLIYSPFSILYESILRNMIKDKLILYIYNI
                     EDSMTMMIFQNKEMRFSAYFDTRKDSSHLVDEKELSKEDTTDIDNVIEKEEDKLNELD
                     GLDDLSSVINSSKKESFEDLQSSEINDINRNLEDSVRDIGRETLLLNNIRLAIMEFYK
                     NEAYRSDFIEHIMIFDGLKLEKSFLSILESELLIEADIQEINIENDMNDIMIRELYV"
     gene            11867..12394
                     /locus_tag="RPW04_000513"
     CDS             11867..12394
                     /locus_tag="RPW04_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294631.1"
                     /translation="MSYSFITPKLKPIFSIFSKIWIAAILIVTFSLVCADLFIKFETY
                     SLKKQNDEKQIRYDKIFAQISNLKSEMKTLMVQRDAALDIYSSNNILKKSLHNLFDLV
                     PDAITLNDVYIDTNSLIVKGLTPTKDVYKLLLEAPLKSIFNSSSTTFYQLENGWFNFV
                     SINKMDNLEVENEKR"
     gene            12381..12917
                     /locus_tag="RPW04_000514"
     CDS             12381..12917
                     /locus_tag="RPW04_000514"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294632.1"
                     /translation="MRKDRSLEEIDIVKLLFYALVFAICCIIMIFGFIVPSIKEYKNA
                     KIINNDKIINLNKIEQLYNSQLANLTSLKDKNIRPLEAIVSHFNEMKFVTGAGKYFSN
                     VKLNKLPQLDKNEHFLRYELNVTGLIKSPQNFYSFIDFINEYENIIRVDFPISMKGNG
                     DKIDTSFKIKVYVSQKET"
     gene            complement(12880..13890)
                     /gene="tilS"
                     /locus_tag="RPW04_000515"
     CDS             complement(12880..13890)
                     /gene="tilS"
                     /locus_tag="RPW04_000515"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004277137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDX6294633.1"
                     /translation="MQLLNLDSLHHKKCLLAFSYGTDSTALFHILNEKNIEFDCAFIN
                     YKTRVQSDEEEVSAKELCLKFNKNIYIKIAPLNLENGSNFEKKARDIRHKFFDEICIK
                     FNYDTLILAHQLNDCLEWLFMQLSKGSGTVQLCGLEPTNTKIAEFENIKKQISVIRPL
                     INVSRNEIISYLKQKNINYFTDISNFDFKFKRNFIRANFSDAFIEKFEKGVIKSFEFL
                     RADRTALLGEFIYEDSEFFIIEKSINSINLVDLACKKLDVLMSQSSRKQCLKNDCVIS
                     HKVCVTSNETNYFVAPFIKKKMDKKFKEKCRVLRIPPLLRGYLSQNQHLMSLFEKHKP
                     LS"
     gene            complement(13878..15188)
                     /gene="rimO"
                     /locus_tag="RPW04_000516"
     CDS             complement(13878..15188)
                     /gene="rimO"
                     /locus_tag="RPW04_000516"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HDX6294634.1"
                     /translation="MPNLYLVSLGCNKNLVDSEIMLGRLSSYNIVDKPNNADVMIVNT
                     CGFIESAKEESVRTILELASYKKENSVLVVTGCLMQRYRDELMKELPEVDIFTGVGDY
                     ASIDEMILKKQNLFSPGVYLQKSDTKRVITGSSYHAYIKIAEGCNQKCSFCAIPTFKG
                     KLKSRDINSIIKEVKELTKDGYSDFSFIAQDTSSFLRDAGINDGLIKLIDEVEKIEAV
                     KSARILYLYPTTASMELIDKIIASPKFVNYFDMPIQHINDDMLKIMRRGSSKERLKEL
                     LTKMRAAPKSFLRTGIIIGHPGETGERFDELCDFLTEFKFDRISAFAYSKEEGTLAYE
                     MEQIPSKTITKRLNTIEKIIKKQIEGSFKSLVGEVIKVQINGSSSEGEMFFGAKSIIW
                     DREIDGEILINDTQIKDPKVGEIYDCKINEFVKDKLIGEIICNS"
     gene            complement(15190..16011)
                     /locus_tag="RPW04_000517"
     CDS             complement(15190..16011)
                     /locus_tag="RPW04_000517"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HDX6294635.1"
                     /translation="MQILKSVSELLEFRNNCGGSVGFVPTMGALHNGHATLIKNSVSQ
                     NDDTIVSVFVNPTQFLPGEDLEKYPRNQSGDIKICELCGASALFFPNADEIYSKDEPL
                     IIAPKRISTILEGATRPGHFDGVCMVLNKLFNLVSPTRAYFGKKDSQQLVIVQNMVKR
                     FFLNLEIVPCDIVRESDGLALSSRNSYLNDDELCYALKLSRSLMRASNLIKANELNSN
                     IIKSSMSECLEPLKVDYIAVVDRNFEPIENVEIGNSIILVAAYVGKTRLIDNIWI"
     gene            16183..17292
                     /gene="prfB"
                     /locus_tag="RPW04_000518"
     CDS             16183..17292
                     /gene="prfB"
                     /locus_tag="RPW04_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDX6294636.1"
                     /translation="MDSYEYTELLKKLNTKVQNISRVIKPQDIEIRLKEIEDIENRPE
                     FWNDIKKAGEIGKEKTKISNMLCKFKNVKSAISDAYELYELANAEDDEQTINSLFEDA
                     QNLENKITNLEISMMLSGEDDSKNAIVSIHPGAGGTESNDWASMLYRMYLRFCEREGF
                     KVETLDFQEGDEAGLKDVSFIVKGENAYGYLKAENGVHRLVRTSPFDSAGRRHTSFSS
                     VMVSPEVDDDIAIEIEEKDLRLDYYRASGAGGQHVNKTESAVRITHIPTGIVVQCQND
                     RSQHKNKATAMKMLKSRLYEFELMKQQEANNAIEKSEIGWGHQIRSYVLFPYQQVKDT
                     RSGEAYSQTDAILDGDIKKIIESVLISQKSSANKE"
     gene            17338..17661
                     /locus_tag="RPW04_000519"
     CDS             17338..17661
                     /locus_tag="RPW04_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HDX6294637.1"
                     /translation="MSLDLVLTGLGYNVNSALLEQVKRILSACDFDENEISHILNLNE
                     KLKIYTSFVAISNSEDVFKIKCESNDDEVKQTFNDMVNKWALKYKFKIKKLNGKETYY
                     ILSRA"
     gene            17671..18987
                     /locus_tag="RPW04_000520"
     CDS             17671..18987
                     /locus_tag="RPW04_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009294040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDX6294638.1"
                     /translation="MKYDLIIIGFGKAGKTLAAKAATLGKKVALIEKSDKMYGGTCIN
                     IGCIPTKKLVTLSKDAKFFSDRNEYFCKSMEAKDTLVSALRAKNYGMLNDNPNVTLIK
                     AIAKFKDENTILADGEELSAPIIVINTGSKEKDIPFEVKSNQIYTSTAILNLKTLPKH
                     LIVLGMGFIGLEFASMFANFGSKVTIMARKNEFLPDLDNDTSSSVKEALQAQGIEIIL
                     GSKFERLDGDTLSFNQNGISKNIKADAFLAAFGRTPAIDELSLQNANIAVGDKCEVLV
                     NDHLQTTIPHIYAVGDCKGGPEFTYISLDDYRIVFNHIFGDKTRSSANRSVWATTTFM
                     DTELSQVGKSEKELSKHELKIAKVNLSSVPMAKVLAHDTGFMKAIVDKNSDEILGITL
                     HCKNANEIINMFSLAMENKIKASKFKSQIFTHPSISEAINDLFSQI"
     gene            18998..19396
                     /locus_tag="RPW04_000521"
     CDS             18998..19396
                     /locus_tag="RPW04_000521"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HDX6294639.1"
                     /translation="MNIMKVTALIGACFFIAGCAQASAQKQVESKTLSVSQDSKIEKL
                     DKECKSGIQASCKDLGDYFYDKLDFKTAARAYDYTCAKFQYLPACLRLAYMFESGKGM
                     DKNLEIAKDIYIRACHSGDKESCKKAQNIK"
     gene            complement(19432..20364)
                     /gene="accA"
                     /locus_tag="RPW04_000522"
     CDS             complement(19432..20364)
                     /gene="accA"
                     /locus_tag="RPW04_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002791964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HDX6294640.1"
                     /translation="MASYLDFEKGIKQIDDDIANAKIRGDEHAVEILRKNLEKEITKT
                     YKNLNEFQRLNLARHPDRPYALDYIRALLKDGYEIHGDRAFRDDPSIVCYIGYIGGKR
                     VIVIAEQKGRGTKYKIMRNFGMPHPEGYRKALRIARLAEKFEIPIIFLIDTPGAYPGV
                     GAEERGQSEAIARNLFEFSELKTRTIAVVIGEGGSGGALAIGVADRLAMMKNSVFSVI
                     SPEGCAAILWNDPSKNEAATKAMKITADDLKELQLIDDVIDEPVMGAHRDKEGAIKAL
                     GEYILKQLDELEKKDINDVVKNRIEKILSVGAYA"
     gene            complement(20364..21578)
                     /locus_tag="RPW04_000523"
     CDS             complement(20364..21578)
                     /locus_tag="RPW04_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HDX6294641.1"
                     /translation="MKRVVVTGMGMVNALGLDKETSFKNICDGKTGVKKITLFDATDF
                     PVQIAAQIDDFDPATVMEAKEIKKADRFIHLGLKAANEAINDANLSEFDPNEFGVSSA
                     AGIGGLPNIEKNSNICFEKGPKRISPFFIPSSLVNMLGGLVSINHNLKGPNLSSVTAC
                     AASTHALCEAAKSIMIGEAKAMLVVGAESAICPVGIGGFAAMKALSTRNDDPEHASRP
                     FDKDRDGFVMGEGAGALVLEEYESALSRGAKIYAEIIGFGETGDAHHITSPSQDGPER
                     AMKKALSMAENIKIDYVNAHGTSTYANDTNETNALKAIFGSNIPPVSSTKGQIGHCLG
                     AAGAIEAVISIMALQNSIIPPTINQIEQDDECDLDYVPNIARKAELKTAMSNSFGFGG
                     TNGSVIFKKLEK"
     gene            complement(21600..21833)
                     /gene="acpP"
                     /locus_tag="RPW04_000524"
     CDS             complement(21600..21833)
                     /gene="acpP"
                     /locus_tag="RPW04_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDX6294642.1"
                     /translation="MAVFDEVKDVVVEQLSVAPDAVKMESKIIEDLGADSLDVVELVM
                     ALEEKFEVEIPDSEAEKLISISDVVNYIDGLKK"
     gene            complement(21894..22637)
                     /gene="fabG"
                     /locus_tag="RPW04_000525"
     CDS             complement(21894..22637)
                     /gene="fabG"
                     /locus_tag="RPW04_000525"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDX6294643.1"
                     /translation="MKFSGKNVLVTGASRGIGAEICKVLAGFGLKVWINYRSKPELAD
                     SLKDEIEKSGGKAAVIKFDAANEDEFIEAINLIVQSDSELSYLVNNAGITNDKLAIRM
                     KTEEFVSILDANLKSAFIGSKEALKVMSKKRFGAVVNVASIVGEMGNAGQTNYAASKG
                     GMIAMSKSFAKEGAARNVRYNCVAPGFIQTDMTNVLSEEVKSNYIANIPLKRLGEAKE
                     VANSVAFLLSDYSSYITGDVLKINGGLYM"
     gene            complement(22662..24125)
                     /locus_tag="RPW04_000526"
     CDS             complement(22662..24125)
                     /locus_tag="RPW04_000526"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HDX6294644.1"
                     /translation="MNKKCILVITDGIGYNKSSDFNAFAAAKKPTYDWLFKNAPMNYI
                     KTSGLAVGLPDGQMGNSEVGHMTIGSGRILYQNLVKIDKAIDDGSLEKNEVLLNLIKK
                     VKRVHIIGLYSDGGVHSHLKHFDVICNICKQNGKETFAHAITDGRDVSPTSGLGFIKE
                     LESKFKIASISGRFYAMDRDKRWERVNKAYQVISQNSNLQNITPTQYIQNSYNNKIFD
                     EFIEPASFSDFGGIRSEDGIIFVNFRNDRAREICSALSIKDFNEFQRKNICENLITMT
                     NYDDKFNFPIMFENEEIKDTLAEIIARNNLRQLHTAETEKYAHVTFFFNGGKEELVEN
                     EIRVLIPSPKVKTYDEKPQMSAYEVTQAVIKAINDGIDFIVVNYANGDMVGHTGDFDA
                     AVKAVEAVDECLGLVIKAAKKEGYSYMQISDHGNCEAMQDKKGGVLTNHTTFDVFAFI
                     LADGVNKVNSGGLSNVAPTILKLMNINIPKVMDKPLI"
     gene            24224..25288
                     /locus_tag="RPW04_000527"
     CDS             24224..25288
                     /locus_tag="RPW04_000527"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021086091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDX6294645.1"
                     /translation="MFYYFYELFGINFFSYITVRAGISFFLAFVLTVYFMPKFILWAK
                     AKNANQPIYELAPQNHKKKNKIPTMGGVVFVLCAIFATLFSAKLDNNFVLIGILVLAS
                     FSLLGYIDDRGKILGAKNHAGLHAKIKFILQWIIGIICACLLLFFTDLDSLFYIPFYK
                     YSIFDMGYFIILFWALVIISASNAVNLTDGLDGLATVPSIFGLVTLGVFAYLMGNAVY
                     SSYLLLPKFVGVGELLILVTALIGALLGFLWFNCYPAEVFMGDSGSLSVGAFIGYMGI
                     VTKNEILLIVIGFVFVMETLSVILQVSSFKIHKKRIFLMAPIHHHFEIKGWSENKIIV
                     RFWMIALLANLIALIALKLR"
     gene            25292..>26287
                     /locus_tag="RPW04_000528"
     CDS             25292..>26287
                     /locus_tag="RPW04_000528"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDX6294646.1"
                     /translation="MRRSLFGYGKTTKAISKSGGWDIYDDSFKDDSLDEFGNRLLNPS
                     KFKAQNSSLEIPSPGFPRNHDLVKSALNLISEYDYFINDTPKSIWISGTNGKTTTTKM
                     TEWLLEDRGCVMGGNVGTPLADLLNLKAKVWVLETSSFTIHYTKFAKPDIYVLLPITP
                     DHLSWHGSMEEYEKAKLKPLSMMREGSVAIIPKKYADISSCAKIIGYESEEDLASQFD
                     IDLSNISFKTPFLIDALLALCVENIIFSKVSYELLNKFQIEAHKLEEFRDRLGRLWVD
                     DTKATNIDAALQALKRYKNDKLHIILGGDDKGVSLDPLFDELRGMSATIYAIGSNA"
BASE COUNT         8580 a         4017 c         4655 g         9035 t
ORIGIN      
        1 ttgtaaaaaa tagatccgta atatataatc caatgttttt taatgtagat atagacgcaa
       61 gtaagcctga aaaagaaaat ataattattt ttgtaggaag acttataaaa gctaaagggt
      121 gcgatgtttt tttagaagct ttaagtctta taaaatatga attaaaagat tggaaaattc
      181 ttgttttggg agatggagat gagattttaa atttaaaaaa tttagcaaaa aatagaaatt
      241 taaatataga attttgcggt atggtaaata atatatctaa ttactataaa aaagctaaga
      301 ttttagttct aagttctagg agtgagggtt tgggcaatgc ttttatagag gcgatttttt
      361 ataatatttt aagagtatcc acccctacaa gtggtgcaaa agagcttata aaagatggat
      421 ttgacggact tataagcgag gattttagcg ctgagagttt gtctaaaaag ataaaaatgt
      481 ctcttagcgg ctgtgatagt ttagtcgaaa atgcgaaatt aagacaaagt gaatttgaga
      541 taaaaaatat atataatagg tggttgaatt tgataaaaga agcagcaaat tgaatataat
      601 cttttttatt tcagctctta gaaacggtgg agctgagcga gtattgcaag ttttaagtag
      661 tgagtttagt aaaaaacata gtgtagaagt agtctacttt gaagaagata aaaaacacta
      721 tgaattttta gttaagacaa ctcatttaaa tatatatcat aatactacaa tattatctaa
      781 atttaaaaag ttttttacta ttagaaattt tataaaaagt aaaaaaccag atcttatcat
      841 aagttttatg gatcaaacaa atataaattt aataatatca actatgttta tgtctcgtac
      901 gttgataata accgagcatg ttagccatac acttttaaag tctaaaattt ggcgctttat
      961 aagggatttt agttatagat ttgcaagtgg attaaccgtt cttactaaag aggattttga
     1021 gtattataaa tttgtaaaaa atagagctat aatgcataat ccgatctttc ataagccaaa
     1081 aaatactaaa tactataaag aaagtataat tttaagtgtt ggtagattag aaacagtgaa
     1141 aggatatgaa aattatttta aagctttaag tctcatagat aaaaatatac ttgataaatg
     1201 ggatattatt atagccggta atggtagttt ggaaaatagc cttaaaaatc tagctataaa
     1261 tttaaattta aaaataaatt ttgtgggtca tcaaaaagat ataggcagtt tgtatgaaag
     1321 agcaaaaatt ctagctttgc ctagcatgaa cgagggattt ggaaatgttc ttatagaggc
     1381 tttattttac gagtgtgcaa gagtatccac ccctacaagc ggtgcaaaag agcttataaa
     1441 agatggattt gacggactta taagcgagga ttttagcgct gagagttacg caataactct
     1501 tgaaaaactt ttaaaaaatg atggaatgtg tcaaaattta gtacaaaacg caaatttaaa
     1561 aaaatcgaaa ttcgagatag aaaatatcat agataaatgg tataaattta taaaagagtg
     1621 cgaacaatga aaaagttaag tgtttttata tattctatgg cgggcggtgg agccgagagg
     1681 gttgtaagca accttttgac tgagcttata aattcgtatg aggtgcattt gatccttatg
     1741 aacgatagga tattttacga gattccaaaa gatgtaaaaa ttcattatct tgaaaactca
     1801 gaaccgtttg aaaatggact ttggaaactt atcaaacttc catttttagg gctaaaatat
     1861 aaaaaacttt gccaaaatct cggtatagat ttgcattttg tctggatgaa tagaccttgc
     1921 tatattgctg gatttgcccg tattttcgga gataaaaagc cgctcatact aaatgaatgt
     1981 tcaactccta gcgtgcttta taaagattct agtttgaagt cgaaaataag taaatttttg
     2041 cttaaaaaac tttatccaaa agctgatttt atatatccaa atagtattgg aaatttaaat
     2101 gatttaagag ataatttcga tatagatcca aaaaaaatgc gcgttcttta taatgcttta
     2161 aatttagatg agataagaga aaaaagcaga gatttaatag atgaaaaaga accttttttt
     2221 ctaagtgtag gaagacttga tagcggtaaa aatcatgagc ttttgataag atcttatgca
     2281 aatttaaaaa attgcgataa aaatcttttg atattaggcg agggagtttt aaaagaacat
     2341 ttgcaaggtg ttataaatga gttaaattta gaaggtaggg taaagctttt aggatttgat
     2401 aataatccgt ataaatatat gtcaaaatgc tatgcttttg ttttcgttag cctttttgaa
     2461 ggtttttcaa atgctcttat agaagctctt gcttgctcta aactagttat ttcaagtgag
     2521 cataaaagtg gcgcaagaga gcttttaggt gatgacaaat ggggagtttt ggttcaggta
     2581 aatgatgaaa ttgctacaac taaagctatg caaaaagctt tagatgagcc agattgggtg
     2641 aaaatttatg aaaaaaacgc tattataaga gcttcatttt ttgataaaag aaaaatcgca
     2701 gatgaactta taaaagattt agaggaaatt tatgaaaaac ttgggtaatt tttttatgat
     2761 atttagatca aatactctgt ttttgatcat tttagcatat atttttagcg taatttgtag
     2821 atttgagtgg atatattggg cgagcggtta cgctgagttt ttttggaaca accaacttat
     2881 gataagtaca aatgacggat atgcgtacgc tgagggcgct agagatatga tagctggctt
     2941 tcatcagcca aatgatctta gcttttatgg aactccgctg tcttctataa catatctttt
     3001 ggtcgagatt acgccatttt ctctagaaac cattatggta tatttaagtg tatttttagg
     3061 cggtcttgtg gtaattccta tcatactaat ggcgcgtgaa atcggtgaga ttaaagccgg
     3121 atttatcgcc gcactgcttg ctagtatagc aaatagctat tacaatagaa caatggccgg
     3181 ctattatgat actgatatgc ttattatctc gcttcctatt tttacgtttt ggggtattgt
     3241 gagattatat acaaagcgtg atttgaaatc gtttttgatc atttcatttt ctatgcttat
     3301 ttatagctgg tggtatccat caagtttctc tttgaatgtg gctatcactt tgttttttgg
     3361 actttatact attatttttg atagaaaaaa tatcttaaat tatcaagctg ttttatttat
     3421 gattttagct attagcgggg ctgagtattt tataagggcg attttgattt tggctctatt
     3481 tgtatttatt aaatttaaac caaatttgat aaatacaaaa gttatgatct ctttgtatgc
     3541 cgctgttttg ctgtttttta tatattttgg cggattaaat cctatctggt ttcagctcaa
     3601 attttacata tttagaagcg ttagcgatag cgatggcgtt atgtttaagt attttaacgt
     3661 aaatcagact attatggagt ctggaatgat agatttcaga tttttcgctc agagaataag
     3721 cggcgatatt ttcgtgtttt taatagcgct tatcggatat gttttgcttt gttttaaata
     3781 tcgcatattt ttagttactt tacctatgat cggtcttggg tttttgtctt taaagggcgg
     3841 acttagattt accatttacg ctgtgcctat gatggctttt ggatttggat atgctttgaa
     3901 ctggatttca aaatttataa aaatagataa aaaacataga aaaatatctc tctacgcagt
     3961 aacttttttt agctttttac ctgttatttt acttgtttta ctgcaaattt acgaggggat
     4021 atatttggat gaatttaaat ttttatttcc tatttttgta gttgcttata tactttttta
     4081 ctttaaattt aggcgtgaaa ttgccactat ggttctattc ccattaagtt tatttgcact
     4141 tacgccatct cttatacata tctatgaata caagcctcta accgtattta tgaatagcga
     4201 agttaaggtt ctagacaaac taaaaactat cgcagacccc gaggattacg tagtagcttg
     4261 gtgggattat ggttacgcga ttcgctatta tagtgataca aagactctta ttgatggagg
     4321 aaagcatcta ggtagagaga attttgccgt tagttgggct cttagcagac cttttatctc
     4381 ttcggcaaat atggcgagac ttgaggtgga atataccgaa agaggatttg agcagaaatt
     4441 taattcaaat ttaaatgaga tgctaaaaga ttataatgct tcagacgtaa atggtttttt
     4501 ggctagttta aatgatcaaa attttactct tcctgaaaaa actagagata tttattacta
     4561 tcttccagat agaatgatgg gcatttttcc tgtcgtgact aaattttcta ggttggattt
     4621 agtaactgcc aaagagttta gagacgcatt tttcatagta tctacttcat ttgctcaagg
     4681 cggcgatgga gtcgtactaa gcgaaggtat aaccatagca aatgatggaa caaagatatc
     4741 ttttagcgga aaaacattta gagtaaatag ctatatagag acaaaatacg ataaaaatat
     4801 gaatttagaa aaacaaattc atcatataga tgataacggc ggcttctacg tagtttatat
     4861 ggttgattat ggcagatttc ttattatgga caaggagatg tttaattcaa cttatattca
     4921 gctgtttgtg cttgaaaatt acgaaggttc ggactacgag cctattatat tagatccaag
     4981 cgctaaggtg tataaactaa agagataata ttatgaaaat aggtttttta tcacattcgg
     5041 atttgagtat ttattatttt agagctccta taatgcgagc tttaagggac agaggacata
     5101 aagtttttgc tattgttcca aatggtagat atataaataa aataagcagc gagtttcaaa
     5161 ctgtaattta tgatcttgat aaagctagtt taaatccttt tagggtttta aaagacacaa
     5221 aagatcttgc aaatatctta aagcctttaa atttagatat gattcaaact gcggctcata
     5281 aatcaaatgt ttttggtacg tttgctgctc aaaaagccgg tatcaggcat attttaaatt
     5341 tagtagaagg aatgggcagc ttctacacaa aaagtgatat aaagactata gtcgtaagaa
     5401 atgttataga aatgttatat aaacatgcgt ttagtataag cgatgcttgt atatttgtta
     5461 atgacgccga tcctgattat atgttaaaaa aaggaattat agactcttca aaagtaagac
     5521 gcataaaaag cgtaggaatc gatgctaacg agtttgatcc aagtatagtt agcgctcaag
     5581 agtttggtca aaaaaaagta gttttgatgg ttggaagagc gctttttgat aaaggtataa
     5641 gagaatttta cgaggcagcc gatctactta gtagtagaga tgattgcaaa tttgtatttg
     5701 taggagatac ttatgaggga aatgctagta gcgctagtag tttattttta caaaatcaaa
     5761 atgtaacatg gataaagtgg agtgatagga taagagagat tttaaaagga tcatatatct
     5821 atgtactacc tagctataaa gagggatttc caagaactgt tttagaagct atgagtatgg
     5881 aaaaggcttg tgtggtaagc ggatgcgatg gatgtttgga ggctgtaaaa gacggagtaa
     5941 acggactgat ttgcaaagta aaagactcaa aagatttagc tagtaagata gaaactcttt
     6001 tagataacga acatcttgta aaaaagatgg ggaaaaacgg tcgaaattta gtcttagaaa
     6061 attatgatga acatataata actaaacaat atctcgaagt ttataaggaa tttatagatg
     6121 tatagagcat tttttaaacg ttttttggat ttttttggat ctttggtttt gatattttta
     6181 acgagcccta ttatgatatg ggcatatttt gctataaaaa agcgtttagg aagtccggtg
     6241 attttcactc aaaatagacc tgggctgggc gaaaaaatct ttcaaattta taaatttaga
     6301 actatgagcg atgaaaaaga tgaaaacggc aaacttctaa gtgacgagct tcgtttgggc
     6361 gaatttggta aaaaattaag atctcttagt atagatgagc taccgcagct ttttaatgtt
     6421 ttaaaaggcg atatgagttt tataggacca agacctttgc tcatccagta tttgccgctt
     6481 tataacgatg aacaaaagct tcgacacacg gtaaggccag gtataaccgg acttgctcaa
     6541 gtaaatggta gaaacggtat tagctgggcg aaaaagtttg aatatgatag ctactacgct
     6601 aaaaatttaa gttttttaat ggatttaaaa atagcgtttt taacggttaa aaaagttatt
     6661 aaaaaagatg gtataagtaa agaaggtatg gttactactg aagagttcaa cggaaataat
     6721 taggttgaaa tatgaaaaaa atttatattt acggtcatag tggacatggc aaggtagttt
     6781 ctgaaatagc aaagttaaat ggctatggcg agatcatttt tttagacgac gcaagcgagt
     6841 ttaaatttaa aaaagaactc ccaaagcatg atataataat agccataggc aatgctagaa
     6901 taagacataa attacaaaca atggttttac aaaatggatt taacgtagta aatttaatcc
     6961 atccaagcgc cgctatctct caaagcgcta aattcggaaa aggtatcgta gtaatggcaa
     7021 acgcagtagt aaatgcgaac gttatattag aagatggagt tataataaac tcaggcgcga
     7081 taatagatca tgactgtttt ataggcgaat ttgctcatat atgcccggga gtttctttgg
     7141 ccggaaacgt aagcgtaggg aagtttagct ggatgggaat aggaagctgt gcgatacaag
     7201 gcgtcaaaat aaaaaacgac attatgatag gcgcgggaag cgtaattgta aaagatattt
     7261 taatcggaga taaagcatac ggaaatccgt gtaaggtagt ttcaaaatag ttttttaaat
     7321 ttaaaagctg cacggtgatc acgcagcttt tatttgtatt taaattacat atctccaaaa
     7381 agagctttta gattttttaa accctcttca ttgcttactt cttgagtagg agcgccgatc
     7441 tcatgaagta taatttcaaa tccgcttaac atacttgcta atcttatatt tataccgcta
     7501 actccgatag ctttactttt ttgttctggc actaaagaaa caatggcttt tttatcgtct
     7561 atttttaccg agcttactat ggcaggagct agggctcttg caacaaatat ggccggttcg
     7621 ctgctatact ctatggcgtc tatattttct ccgtttaatt cactgcttac agcgtttatt
     7681 ctaacacctt ttatcccaac tgtagctccg actgcatcta tgttgggggt tgtagaaaat
     7741 agtgcgattt ttgctttttt acctggtatc ctagcactat tttggattat aacgcctcca
     7801 tcttttatct ctggaacttc tgcttttaaa agtgcttcta aaaattttgg tgatgtacgc
     7861 gaaagttcca cttttatacc atctttttta tctaaacgaa cactttttat gactgctttt
     7921 actacatttc ctactttaaa tttttcattt tttatacgat ttttcatact cattacggct
     7981 cttatctcgt caatctctac aaaagtattt tcttctgcgt cgactcttgt aacggtgcca
     8041 aataccaatg tgtttatttt agagttatat ttttcataaa ttttttcttc aatcaatctt
     8101 tgaatatggt attctatctc gcgagatagt accccggctc cggttctacc tagttcatca
     8161 atgtttagtt catagttcaa gctatcacct atttcgagcg tggcatctaa ttcgtgagct
     8221 tttttgaggc tgataaaatg ttcttcgtct agtctctcgt cactatcttc tactactaaa
     8281 attttttgat ataaatgtat agcttttgta tttgggtcaa gactagcttc atactcacac
     8341 tcatatccgt acaatctttt tgccgcattt acgaatgctc ttatgattct ctcttttaca
     8401 tcttcgaaat ttaagccttt ttcatttgct atagattcga tgatatctga aattttttcc
     8461 ataaaaaacc cttttgttta tgctgaaatt tgaaaataat aaattgggga tttaaaattt
     8521 gcaagtggac tgattataac taaatttaac ttttattttc tttaaaatta atgttatcaa
     8581 attccggtat tttcaaattt aaacgaattt ttatcgcaat tttgatatac tcaccagctt
     8641 aaaacagtaa aaaaggacgg aaaatggagt taaagctagc cagaacagaa cttgataata
     8701 agccaaaaac aataagttta gataaaatag aagcagctat aggcaaagat ggcggcaaaa
     8761 ttttttattt cgataaagat aattcgcaca aagagctgat agctttagta gaatattttg
     8821 aagaaagagg acttagcgtc tatcaccgta cagttagata cggacttgat gaaaatgact
     8881 atatgtatga ggtgcatatc ctttgagtgt caaaaagaaa ctgtttatag agactttagg
     8941 ttgcgcgatg aatgttcgcg atagtgagca tatcattgcc gaactaagtc aaaaagaaaa
     9001 ttacgaagtt actaatatta ttgaggatgc tgatctcata ctcataaata cctgctcagt
     9061 tagagaaaaa ccggttcata agctttttag cgaggtcgga acatacgaaa aagctaagaa
     9121 aaaaggagca aagataggag tttgcggttg cactgcaagt caccttggaa gtgaagtttt
     9181 taagcgcgct ccatatgtag atttcgttct tggcgctaga aatatatcta aaataacaac
     9241 agcgcttaat actccaaaat tcgtaagcgt agatataaat cacgatgaga gcgagtatgc
     9301 ttttggagat tttcgctcaa gtccttataa gagctttgta aatattatga taggttgtga
     9361 taaaaaatgt acttattgca ttgttccaca aaccagaggc gatgagataa gcattccaaa
     9421 agatattatt ttaaaagagg tgagaaaagc agcttcttct ggcgcaaaag agatattttt
     9481 gcttggtcaa aatgtaaata attacggtaa aagattttca ggaactcatg aaaatataga
     9541 ttttagcgac cttttaaatt taataagcga agttgatggc gtagagagaa ttcgttttac
     9601 cagtcctcat ccgatgcaca tggatgataa gtttttaaaa gaatttagca caaatcctaa
     9661 aatttgtaaa tccatgcata tgcctttgca aagcggttca aatgagattt taaaagctat
     9721 gaaaagagga tacacgaaag agtggttttt ggatcgcgct ttaaaattaa gagagatttg
     9781 ctccgatgtt actatttcta cagatatcat agtagcgttt ccaggtgaaa gcgataggga
     9841 ttttgccgat actatgagtg ttgtagaaag catcaaattt gaacagatgt tttcatttaa
     9901 atactcatct cgtccgctaa ctcctgctgc aagtatgacg aatcaagtaa atagcgatat
     9961 agcaagtagg cgcttaagta cgcttcaagc taggcatact gaaattttag atgagattgt
    10021 aaaagctcaa aaaaactcta ttcatgaggt atattttgaa gaacttagag caaacagtag
    10081 cgtagcaggg cgtacattta acaacttttt ggtgcaaact aatggcagcg aagagttact
    10141 tggaaagata ctaaaagtaa aaattacgga tccaaaaaga atggttttat atggtcaaat
    10201 catttaaaga taaatttttt atcaaatttg tcgagttgtc aatcatatct attatgcata
    10261 tcatatatat aacttgtaaa aaagagttta aaggcaaaag tatctcaaaa gagccttgcg
    10321 taattctttt ttggcatgga aagcttgtga tgcttccgtt tgtatttaaa aaatggtggg
    10381 atactaaaaa tgtaaaagtc atgatttcag accataaaga cggagaaatg gtaaatggcg
    10441 tttcttatca ttttggcata ggtactatta gaggaagtac tacaaaaggg gctttaaagg
    10501 cacttttagc tgcttttaga acgataaaag aaggagctga cgttgccata actccagatg
    10561 gtccaaaagg tcctaggcat agtatttcag atggatgtgt cgctattcct caaaagatga
    10621 atgtaaatat cgtaattctc aattacgaag ccagtaaatt ttggcaattt ggcagttggg
    10681 ataagatgat tttaccaaaa ccatttagca aaataaccta taccctaagt gagccgttta
    10741 gcatatcagg gcttagtatg gatgacgcta aagcacttat attaagcaaa atgcctaact
    10801 aaattagtgt ataatataat tttaatgcta aatttgataa catatgtaat taaattttaa
    10861 ggcaaggtat ggcttcttgg attagaaagt ttttatcaac tctttatgta agtgcggtta
    10921 taaaagataa tcaatgctat acatatgcta gagccattaa aaatggtaaa attataaaaa
    10981 atttagaagc cgtatttgac tgtacagatg gtagagtcga tattaaattt aacgaatatt
    11041 taaaaaagcg cgaaagcgag taccactcgg tatatctatc tgttttatta aatagtccaa
    11101 agcagtgggc tatccctgcg gttagtaagc aagatttttc taaatttgct atacaataca
    11161 atagcgtaga tatagtagct gtggataata actggtctat tgtagtccca aaaggtgaaa
    11221 tagcagcttt tgatagttct ctaaatagag ctgatgcaga tcttatatat tccccgtttt
    11281 ctatcttata tgagagtatc ttaagaaata tgataaaaga taaattgata ctatatatct
    11341 ataatataga agatagcatg actatgatga tatttcaaaa taaagaaatg agattttcgg
    11401 catattttga tactagaaaa gacagtagtc atttggtaga tgaaaaagag cttagtaaag
    11461 aagatactac agatatagac aatgttatag aaaaagaaga agataagcta aacgaattag
    11521 acggactaga tgatttaagc tccgttataa atagttcaaa aaaagagtct tttgaagatc
    11581 tgcaaagctc tgaaataaat gatatcaata gaaatttaga agatagcgta agagatatcg
    11641 gtagagaaac tttgctttta aataatatac gtttggcgat tatggagttt tataaaaatg
    11701 aagcttatag aagcgatttt atagagcata taatgatttt tgatggtttg aaattagaaa
    11761 agtcattttt aagcatcctt gaatcagagc ttttgataga agccgatata caagagataa
    11821 atattgaaaa tgatatgaat gatattatga tcagagagct ttatgtatga gttatagctt
    11881 tattacacca aaattaaaac cgatattttc aatattttct aagatatgga tagctgctat
    11941 tttgatagta actttttctt tggtatgcgc tgatttattt attaaatttg aaacatattc
    12001 gcttaaaaaa caaaacgacg aaaaacaaat cagatacgac aagatatttg cacagatttc
    12061 aaatttaaaa tccgagatga agactcttat ggtgcaaaga gatgctgctc ttgatatata
    12121 ttcatcaaat aatattctaa aaaaaagtct tcataatcta tttgatttgg tgccagatgc
    12181 tatcacgtta aatgatgttt atattgatac aaactcactt atcgtcaaag gacttactcc
    12241 tacaaaagat gtttataagc tgctactaga agctccatta aaatctatct ttaatagctc
    12301 aagtactact ttttatcagc tagaaaatgg ttggtttaac ttcgttagta taaataaaat
    12361 ggataattta gaggtcgaaa atgagaaaag atagaagctt agaagagatt gatatcgtaa
    12421 aactactatt ttacgcatta gtttttgcaa tttgctgtat tatcatgata tttggtttta
    12481 tagtacctag tatcaaagag tataaaaatg caaaaattat caacaatgat aagataataa
    12541 atttaaacaa aatagaacaa ttatataaca gtcaattagc aaatttaaca agcttaaaag
    12601 ataaaaatat aagaccttta gaagctatag ttagtcattt taacgagatg aaattcgtaa
    12661 ctggagccgg aaaatatttt agcaatgtga agttaaataa acttccgcag ttagataaaa
    12721 acgaacattt tttgagatat gaattaaatg tcaccggtct tataaaaagc ccccaaaatt
    12781 tttatagttt tatagatttt ataaatgaat acgagaatat aataagggtt gattttccta
    12841 tctctatgaa gggaaacggg gataagatag atacgagttt taagataaag gtttatgttt
    12901 ctcaaaaaga gacataagat gttgattttg acttaaatat ccgcgaagta gtggaggaat
    12961 gcgtaaaact ctacactttt ctttgaattt tttatccatt tttttcttta taaacggtgc
    13021 tacgaaatag ttcgtttcat tagaagttac acacactttg tgagatatca cgcaatcgtt
    13081 ttttaagcat tgttttcttg agctttggct cattaaaaca tctaattttt tacaagccaa
    13141 atctactaaa tttatagaat ttatgctttt ttctatgata aaaaactccg agtcttcata
    13201 gataaactcc cctaaaagcg cagttctatc tgctcttaaa aactcaaagc tttttataac
    13261 tcctttttca aatttttcta taaaagcatc actgaaattt gctcttataa agtttctttt
    13321 gaatttaaaa tcgaaatttg aaatatctgt gaagtagttg atatttttct gttttaaata
    13381 agatataatc tcatttctac ttacgtttat cagcggtctt ataacgctaa tttgtttttt
    13441 gatattttca aattcggcta tttttgtatt tgtaggctct aatccacata actgcactgt
    13501 tccagaacct ttgctaagct gcataaatag ccactctaag cagtcattta gctgatgagc
    13561 taaaatcagt gtgtcatagt taaatttaat acaaatttca tcaaaaaatt tatgtctaat
    13621 atcgcgtgcc tttttctcaa aatttgagcc attttctaaa tttaaaggtg ctatttttat
    13681 ataaatattt ttattaaatt ttaagcaaag ttcctttgcg ctaacttctt cttcgtcact
    13741 ttgcactctg gttttataat ttataaatgc gcagtcaaac tcgatatttt tctcatttaa
    13801 tatatgaaaa agtgcggtac tgtcggttcc atatgaaaat gctaacaagc actttttatg
    13861 atgcaaacta tctaaattta agagttgcaa ataatctctc cgataagctt gtctttgaca
    13921 aattcattta tcttgcagtc ataaatttcg cccactttag gatcttttat ttgagtgtca
    13981 tttatgagaa tctcgccgtc gatctctcta tcccatatta tgcttttagc tccaaaaaac
    14041 atttctcctt cgctgcttga gccgtttatc tggactttta tgacctcgcc tactagactt
    14101 ttgaaactac cttctatctg tttttttata attttttcta tcgtatttag tctttttgtt
    14161 atggttttag aaggaatttg ctccatctca taagctagag taccttcttc tttagagtaa
    14221 gcaaaagccg atatcctatc aaatttgaac tcggttaaaa aatcacacaa ctcatcaaat
    14281 cgctccccag tctcccccgg atgacctatt ataattcctg ttcgcaaaaa gcttttaggc
    14341 gctgctctca tctttgttaa aagctctttt aagcgctctt ttgaacttcc tcgcctcatt
    14401 atctttaaca tatcgtcatt tatatgttgg ataggcatat caaaataatt tacgaattta
    14461 ggcgaagcta taattttatc tataagctcc atactcgcag ttgttggata taagtagaga
    14521 attctagcag attttactgc ttctatcttt tctacttcat ctatgagctt tatgagccca
    14581 tcatttatcc ctgcgtctct taaaaatgag ctagtatctt gtgcgatgaa gctaaagtcg
    14641 ctatatccgt cttttgttag ctcttttact tctttgatta tgctgtttat atctctgctt
    14701 tttagtttgc ctttgaaagt gggtatggca caaaaactac atttttgatt gcagccttcg
    14761 gctattttta tatatgcatg atagctagag ccggttataa cgcgttttgt gtcgcttttt
    14821 tgcagataaa caccaggact aaacagattt tgctttttta gtatcatttc atctatgcta
    14881 gcatagtcgc ccactcctgt aaatatatct acttctggaa gttctttcat aagctcgtcg
    14941 cgatatcttt gcataagaca acctgtgact accaatacgc tattttcttt tttataactt
    15001 gctagttcta gtatagtcct tacgctctct tcttttgcgc tctctataaa tccacaagta
    15061 tttactatca ttacatccgc attatttggt ttatctacta tattatatga gctaagacgt
    15121 cctagcatta tctcgctatc gactagattt ttattgcatc ctaatgaaac taagtataaa
    15181 tttggcatat tatatccata tattatctat taatctggtt ttaccaacat atgcagcgac
    15241 caaaattatg ctatttccta tctctacatt ttctatcggt tcgaaatttc tatctacaac
    15301 agcgatataa tcgactttta acggctctaa gcactcactc atagatgatt ttatgatatt
    15361 tgagtttagc tcgtttgctt ttattaaatt tgaagctctc ataagggatc ttgataactt
    15421 taaagcatag caaagttcgt cgtcgtttag ataactattt ctgcttgaaa gtgccaatcc
    15481 gtcgctttct cttactatat cacaaggtac tatttctaaa tttaaaaaaa atctttttac
    15541 catattttgt acgattacta gctgctgaga atctttttta ccaaaatacg ctctagtcgg
    15601 tgatacaaga ttaaataatt tgtttaaaac catacatacg ccatcaaaat gacccggtct
    15661 agtagcgccc tcaagtatgg tggatatacg ttttggagcg attatgagcg gttcgtcttt
    15721 actgtatatt tcatctgcat ttggaaaaaa cagcgcgctt gctccgcaca attcacatat
    15781 ttttatatct ccgctttgat ttcttggata tttttctaga tcctctccgg gtaaaaattg
    15841 cgtaggattt acaaatacgc ttactatcgt atcgtcgttt tgcgaaaccg aattttttat
    15901 aagcgttgca tgaccgttat gtaaagcacc catagtaggt acaaaaccta cactgccgcc
    15961 gcagttattg cgaaattcta aaagttcgct aacacttttt aatatttgca tttttgaatt
    16021 actctttgta agaattttta atctaatatt ttatcataat ttttctaaaa tgtgatattt
    16081 atagtttagt tatcatatgc gtactgagtt ttacaactaa aatctcataa ccaaatttta
    16141 acgaaaaatt tgataaaatt acgaaaaaat taaggatata atttggatag ttacgaatat
    16201 acagaacttt taaaaaaatt aaatactaaa gttcaaaata taagtcgtgt tataaaacct
    16261 caagatatag aaataagact taaagagata gaagatatag aaaacagacc tgagttttgg
    16321 aatgatatca aaaaagccgg tgaaatagga aaagaaaaaa ctaaaatttc aaatatgctt
    16381 tgcaaattta aaaacgtaaa aagtgcaata agtgatgctt atgagcttta tgaattagca
    16441 aatgccgaag atgatgagca aactataaat tcgctttttg aagatgcaca aaatcttgaa
    16501 aataagataa cgaatttaga aatttctatg atgcttagcg gagaagacga cagtaaaaac
    16561 gctatagtaa gcatccatcc aggagccgga ggaactgaga gcaatgactg ggcaagtatg
    16621 ctttatagga tgtatttgag attttgtgag agagagggat ttaaagttga aactttagac
    16681 tttcaagaag gtgatgaagc gggactaaaa gatgtaagct ttatcgtaaa aggcgagaat
    16741 gcttatgggt atctaaaagc tgaaaatggt gtccaccgcc ttgttagaac tagcccgttt
    16801 gatagtgcag gacgccgtca tacaagcttt tcaagcgtaa tggtaagccc tgaagttgat
    16861 gatgatatag ctatagaaat agaagaaaaa gaccttagat tggattatta cagagctagt
    16921 ggagcaggtg ggcagcacgt aaataaaaca gaaagtgcgg tgcgtataac tcatatacca
    16981 acaggtatcg ttgtgcagtg ccaaaacgac agaagtcagc ataaaaacaa agctacggct
    17041 atgaaaatgt taaaatcaag actttacgaa tttgagctta tgaagcagca agaagcaaat
    17101 aacgccatag aaaaaagtga aatcggctgg ggtcatcaga tacgctcata cgtacttttt
    17161 ccgtatcagc aagtcaaaga cactagaagc ggcgaggcgt acagccaaac agatgctata
    17221 ctcgatggcg atataaaaaa gataatagaa tcagtactta taagccaaaa aagtagcgca
    17281 aacaaagagt agtttcatat ataaatttaa taaatcaaac taaaataagg agaaaaaatg
    17341 agcttagatc tagttttaac tggtcttggg tataacgtaa atagtgcttt gctagagcag
    17401 gttaaaagaa ttttgtctgc ttgcgacttt gatgagaatg aaatttctca tattttaaat
    17461 ttaaatgaaa aattaaaaat atatacttct ttcgtcgcta tatcaaatag cgaagatgta
    17521 tttaagatta aatgtgaatc aaacgatgat gaagttaaac aaaccttcaa tgatatggtt
    17581 aacaaatggg cgttaaaata caagttcaaa atcaaaaaac taaacggtaa ggagacatat
    17641 tatatcctaa gccgtgcgta aaggagagtc gtgaagtatg atttgataat tatcggattt
    17701 ggtaaggccg gaaaaacttt agcagctaaa gccgcaacgc ttggaaaaaa agtcgctttg
    17761 atagaaaaaa gcgataaaat gtacggagga acttgtataa atataggttg cattccaact
    17821 aaaaagctag ttactcttag caaagatgct aagtttttca gcgatagaaa tgagtatttt
    17881 tgcaagtcta tggaggctaa agatacactt gtaagtgcgc ttagagctaa aaactatggt
    17941 atgttaaacg acaatccaaa tgtaacgctc ataaaagcta ttgctaaatt taaagatgaa
    18001 aatactattt tagcagacgg tgaagagcta agcgctccta taattgtgat aaataccgga
    18061 agcaaggaga aagatattcc gtttgaagtt aaatcaaatc aaatttatac ttctacagct
    18121 attttaaatt taaaaacact acctaagcat ttaattgttt taggtatggg atttataggg
    18181 cttgagtttg cttctatgtt tgcaaatttt ggttcaaaag taactattat ggcaagaaaa
    18241 aacgagtttt tacccgacct tgacaatgat acttcaagta gcgtaaaaga ggctttgcag
    18301 gctcaaggca tagaaattat ccttggtagt aaatttgaaa gacttgatgg cgatactctt
    18361 agttttaatc aaaacggtat aagtaaaaat ataaaagcag atgcattttt agccgcattt
    18421 ggtagaactc cggcgataga tgagttgtct ttacaaaatg ctaatatagc agttggtgat
    18481 aaatgtgaag tgcttgtcaa tgatcatctt caaactacaa tacctcatat ttatgctgtt
    18541 ggagattgta aaggcggacc ggaatttact tatatcagcc ttgatgatta tcgtatagtg
    18601 tttaatcata tatttggtga taaaactcgc agctctgcta atagaagcgt gtgggctact
    18661 acgactttta tggataccga gcttagtcaa gttggcaaaa gtgaaaagga gctatcaaag
    18721 catgagttaa agatagcaaa agtaaatttg agctctgtgc ctatggcaaa agttctagct
    18781 cacgatactg gttttatgaa agccattgtg gataaaaata gcgatgaaat acttggtatc
    18841 acgctgcatt gcaaaaatgc gaacgagata ataaatatgt ttagcttagc catggagaat
    18901 aaaatcaaag cttctaagtt taaaagccag atttttacgc atcctagtat aagcgaagct
    18961 ataaacgatt tgtttagtca aatttaaaag gtaaaagatg aatatcatga aagttactgc
    19021 tttgatcggt gcttgtttct tcatagcagg ttgtgcacaa gcttcagctc aaaaacaggt
    19081 agagtctaaa acacttagcg ttagccaaga ttctaaaata gaaaaattag ataaagagtg
    19141 caaatcggga attcaagcca gttgtaaaga tttgggcgat tacttttatg ataaattgga
    19201 ttttaaaaca gctgctagag cctatgatta tacttgtgct aaatttcaat atttaccggc
    19261 ttgtttaagg ttagcttata tgtttgaatc tggaaaaggc atggataaaa atcttgaaat
    19321 agctaaagac atttacataa gagcttgtca tagcggcgat aaagagagct gtaaaaaagc
    19381 acaaaatata aaataagatt ggtttgcaat ggttgttaaa ccgttgcaaa tctaagcata
    19441 agctccaaca gatagtatct tttctatacg attttttact acatcattaa tatctttttt
    19501 ttctaattca tctaactgtt ttaatatata ttcaccaaga gcttttatgg ctccttcttt
    19561 gtctctatga gcgcccataa caggctcatc tattacatca tctataagtt gcagctcttt
    19621 taagtcatct gcggtaattt tcatcgcttt tgttgcagct tcattttttg atggatcatt
    19681 ccataatatg gcagcgcatc cctcaggaga tataactgaa aataccgagt ttttcatcat
    19741 agccaatcta tcggcaactc ctatagcaag tgctccgccg cttccgcctt cacctataac
    19801 aacggctatt gttctagttt ttaactcgct aaattcaaat aaatttctag ctatcgcttc
    19861 actttgacca cgctcttcag ctcctactcc tgggtatgct cctggagtat ctataagaaa
    19921 tataataggt atttcaaatt tttctgctaa tctagcgatt cttaatgctt ttctataccc
    19981 ttcagggtga ggcataccga aatttctcat tatcttatat tttgtgcctc ttcctttttg
    20041 ttctgctata actataactc ttttaccgcc tatatatccg atatagcata ctatagaagg
    20101 atcatcgcga aatgctctat cgccgtgtat ttcatagcca tcttttaata atgctctgat
    20161 ataatcaaga gcatatggac gatcgggatg tcttgctaaa tttaatcttt ggaattcatt
    20221 taaattttta tatgtttttg ttatttcttt ttctaaattt tttcttaaaa tttctacggc
    20281 atgttcgtcg cctcttattt ttgcgtttgc tatatcatca tctatctgtt ttatgccttt
    20341 ctcaaagtcg aggtagctag ccattatttt tccaactttt taaatattac agagccgttt
    20401 gttccaccaa agccaaaaga gttgctcata gctgttttta gctcagcttt tctagctata
    20461 tttggaacat aatccagatc gcattcatca tcttgttcta tctggtttat ggtaggcggg
    20521 ataatactat tttgaagagc cattatagat ataacagctt ctatagctcc agcagctcct
    20581 agacaatggc cgatttgacc ttttgttgag ctaacaggag gaatatttga gccaaatatt
    20641 gcttttaagg cattagtttc atttgtatcg tttgcatatg ttgaagtacc atgagcattt
    20701 acgtaatcga tttttatatt ttcagccatt gatagagctt ttttcatagc acgttccgga
    20761 ccgtcttgac taggacttgt tatatgatgt gcgtctccag tttctccaaa tccaattatt
    20821 tcggcataaa ttttagctcc gcgagataat gcgctttcat actcttcaag aactaaggca
    20881 ccggctccct ctcccattac aaatccatct ctatctttat caaaaggacg tgaagcatgc
    20941 tcagggtcat catttctagt agataacgct ttcatagcgg caaatcctcc gataccaaca
    21001 gggcatattg cagattctgc accaacaacg agcatagctt tagcttcgcc tatcataata
    21061 ctttttgcgg cttcgcataa agcgtgagtt gaggctgcac acgctgtaac gcttgataaa
    21121 tttggacctt ttagattgtg gtttatgcta actaaaccgc caagcatatt tacaagtgag
    21181 gatgggataa aaaatggcga gattctttta ggaccttttt caaaacatat gtttgagttt
    21241 ttttcaatat ttgggagtcc gcctatacca gcagccgagc taacaccaaa ttcattcggg
    21301 tcaaattcac ttaaatttgc gtcgtttata gcttcatttg ctgctttcaa gccaagatgt
    21361 atgaatctat ccgccttttt tatctctttt gcttccataa cagtagctgg atcaaagtca
    21421 tctatttgtg cagctatctg aacaggaaaa tcggtagcat caaataaggt tatcttttta
    21481 actccggttt taccatcgca aatattttta aaagatgtct ctttatcaag acctagcgca
    21541 tttaccatac ccataccagt tactacgact cttttcaatg ctactctcct tgttgaaatt
    21601 tattttttta gaccatctat ataatttaca acatcagata tgcttattaa tttctcagct
    21661 tcgctatctg gaatctctac ttcgaatttc tcttctaaag ccataacaag ctcaacaaca
    21721 tcaagtgaat cagcacctag atcctctatg atttttgatt ccattttaac cgcgtctggg
    21781 gcaacactta attgctctac aactacatct ttaacttcat caaatactgc cataattttt
    21841 ctcctaataa ataaaaatgt gcaaaatagt actatatttt tgcttaaagt ttgctacata
    21901 tataaaccgc cattaatctt aagaacatcc ccggtaatat agcttgagta atcactaagc
    21961 aaaaaagcaa cgctatttgc gacttctttt gcttctccta gcctttttag aggtatattt
    22021 gctatatagt ttgattttac ttcttcagat agcacattag tcatatcggt ttgtataaat
    22081 ccaggcgcta cacagttata acgtacgttt ctagcagctc cttctttggc aaatgattta
    22141 ctcatggcta tcataccgcc tttgcttgcg gcgtagtttg tttgtcctgc atttcccatt
    22201 tctccaacta tagaagcgac atttacaact gctccaaaac gttttttact cattaccttt
    22261 agggcttctt tgctacctat aaacgcgctt tttaaatttg cgtctaaaat agacacgaac
    22321 tcttctgttt tcattctaat tgctaattta tcgtttgtaa taccggcgtt atttacaaga
    22381 tagcttaact ctgagtcgct ttgaactatt aaatttatag cttctataaa ttcatcttca
    22441 tttgctgcat caaatttaat aacagccgcc tttcctccgc ttttttctat ctcgtctttc
    22501 aatgagtccg caagttctgg cttacttcta tagtttatcc atacttttaa gccaaatccc
    22561 gccaggactt tacagatttc tgctccgatg cctcgactag ctcctgtgac taagacgttt
    22621 tttccgctga atttcatatt gttcctttta tttaaatttg attatattaa cggtttatcc
    22681 ataacttttg gaatatttat gttcataagt tttaaaatag ttggagctac attactaagt
    22741 ccgcctgaat ttactttatt aaccccatct gctaatatga atgcaaatac gtcaaaagtc
    22801 gtatgattag ttaaaactcc accttttttg tcttgcatag cttcacagtt tccatgatcg
    22861 cttatttgca tataagagta accctctttt tttgccgctt ttataactaa tcctaaacat
    22921 tcgtctaccg cttctactgc tttaacagca gcgtcaaaat cgcctgtgtg tcctaccata
    22981 tcgccgtttg cgtaatttac gactataaaa tcaattccgt cgtttatcgc ttttatgaca
    23041 gcttgagtga cttcgtatgc actcatttgc ggtttttcat cgtatgtttt tacttttgga
    23101 ctagggatta aaacacgaat ttcattttcc actagctctt cttttccgcc gttaaaaaag
    23161 aatgtaacat gtgcgtattt ttcagtttct gcggtgtgta attgacgaag attatttcta
    23221 gctataattt ctgctaaagt gtcttttatc tcttcatttt caaacattat aggaaagtta
    23281 aatttatcgt cgtaatttgt cattgttata agattttcgc agatattttt tctttgaaat
    23341 tcgttaaaat cttttatact aagagcagag cagatctctc ttgctctatc gtttctaaaa
    23401 tttacaaata ttataccgtc ttcagacctg ataccgccaa aatcgctaaa gctagctggt
    23461 tctataaact catcaaaaat cttattatta tatgagtttt gtatatattg tgttggtgtt
    23521 atgttttgca aatttgagtt ttgagagata acttgatacg ctttatttac tctttcccag
    23581 cgtttgtctc tatccatagc gtaaaatcta ccgcttatag aggcgatttt gaacttggat
    23641 tctaattctt ttataaaacc tagtccagaa gtgggactaa cgtctctccc gtctgttatg
    23701 gcgtgagcaa aagtctcttt accgttttgc ttgcagatat tgcatataac atcaaaatgt
    23761 ttaagatgag aatgaactcc tccatcacta taaagaccga tgatatgtac tctttttact
    23821 tttttaatta aatttagaag aacttcattt ttttctaagc ttccatcgtc tatagcttta
    23881 tcgattttaa ctaaattttg atatagtatt cttccgcttc ctatcgtcat atgtccaact
    23941 tcgctatttc ccatctgtcc atcaggaagt ccaacggcaa gtccgcttgt ttttatatag
    24001 ttcataggtg catttttaaa caaccagtca taagtcggtt tttttgccgc ggcaaatgcg
    24061 ttaaaatcac tacttttatt ataacctata ccatctgtta tcactaatat gcatttttta
    24121 ttcatacaaa aatcctttgt gtaattctat caattatttc taaattttaa cttactttta
    24181 tcaatgcttt tgtataattt tgacttttat ataagggctt aatgtgtttt attattttta
    24241 tgaacttttt gggataaatt tctttagtta tatcactgtt agagctggta ttagcttctt
    24301 tttggctttt gttttgactg tatattttat gcctaaattt atattgtggg caaaggctaa
    24361 aaatgcaaat cagcctatct atgaattagc accgcaaaat cataagaaaa aaaataaaat
    24421 accgacaatg ggcggcgtag tattcgtact ttgtgctatt tttgctacgc tttttagtgc
    24481 taaattagat aataattttg ttcttatagg aattcttgta cttgctagct ttagtctgct
    24541 tggatatatt gatgatagag gcaaaatttt gggcgcaaaa aatcacgccg gattgcatgc
    24601 taaaattaag tttattttgc agtggattat aggtattatt tgtgcttgtt tgctgctttt
    24661 ttttactgat ttagactcac ttttttatat tcctttttat aaatattcta tttttgatat
    24721 gggttatttc ataattttat tttgggctct tgtgataatt tcagcttcaa atgccgtaaa
    24781 tttgactgac ggtttggacg gtttagcgac tgttccttcg atatttggac ttgttacatt
    24841 aggtgttttt gcttatttga tgggaaatgc agtttatagt tcatatctgc ttttacctaa
    24901 atttgtagga gtaggcgagt tactgatttt agttactgct cttataggtg ctttacttgg
    24961 atttttatgg tttaattgct atcctgccga agtttttatg ggcgatagcg gtagtcttag
    25021 cgtaggtgcg tttataggat atatgggcat agtaactaaa aatgagattt tacttatagt
    25081 aataggattt gtttttgtga tggaaacctt atctgttata ttgcaagtaa gtagttttaa
    25141 aatacacaaa aaacggatat ttttaatggc gccaattcat catcattttg agataaaagg
    25201 gtggagtgaa aataagatta ttgttagatt ttggatgata gctcttttgg caaatttaat
    25261 agcgttaatt gctttaaaat taaggtaaat tatgagaaga tcactatttg gttatgggaa
    25321 aacaacaaaa gcgatatcca aaagcggcgg ttgggatatt tatgatgata gctttaaaga
    25381 tgatagtctc gacgagtttg gcaataggct tttaaatcct agtaaattta aagctcaaaa
    25441 tagctcttta gaaattccaa gccccggatt tccgcgcaac catgatctag tgaaatcggc
    25501 tttaaattta ataagcgaat atgattattt tataaacgat acaccaaaat caatctggat
    25561 tagcggaact aatggtaaaa ctacaactac aaagatgacc gagtggcttt tagaagatag
    25621 aggttgcgtt atgggcggaa atgtcggaac tccgcttgct gatcttttaa atttaaaagc
    25681 taaagtttgg gttttagaaa ccagctcttt taccattcat tatactaaat ttgcaaagcc
    25741 cgatatctat gttttgctgc ctataactcc tgatcattta agttggcacg gttctatgga
    25801 ggagtatgaa aaagcaaaac ttaaaccact tagtatgatg cgagaaggaa gcgtggctat
    25861 tattcctaaa aaatacgcag atataagctc ttgtgctaaa atcatagggt atgaaagcga
    25921 agaggattta gcaagtcaat ttgatattga tttaagcaat atttcgttta aaaccccgtt
    25981 tttgatagat gctcttttgg ctttgtgtgt tgaaaatata atttttagta aagttagcta
    26041 tgagctttta aataaatttc aaatagaagc tcataagctt gaggagttta gagacagatt
    26101 gggtaggctt tgggtggatg atacaaaagc tacaaatatc gacgcggcat tacaagcttt
    26161 aaaacgttat aaaaatgata aacttcatat aattcttggt ggagatgata aaggcgtgag
    26221 tttagatcct ttatttgatg agctaagagg tatgagcgct actatttatg cgatcggttc
    26281 aaatgca
//
LOCUS       DAPPKW010000013        26284 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.013, whole genome shotgun sequence.
ACCESSION   DAPPKW010000013 DAPPKW010000000
VERSION     DAPPKW010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 26284)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26284)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26284
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.013"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            252..1598
                     /gene="ffh"
                     /locus_tag="RPW04_000529"
     CDS             252..1598
                     /gene="ffh"
                     /locus_tag="RPW04_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDX6294647.1"
                     /translation="MFELIGESLKSAVNKLKFVDDEKALKNALDTLKKALLKADVHHK
                     VTKELVNLVESDLKKTSIGQKQFLDSIKSNLTSILTAPNDGNKGSGFVYASNPPTVVL
                     MAGLQGGGKTTTTVKLANYLKVRKKKVLIAACDLQRLAAVEQLRQLCTANELELFYME
                     NENDPIKVAKNALQKAKNELYDVLLVDTAGRLAIDETLMSQIKDIKSTINPHEIFYVA
                     DAMSGQDGVKTAASFNEALGITGVILSKFDADTKGGVAIGIAKQINIPLRFVGVGEKP
                     ADLESFIPDRIVGRIMGEGDLATLAEKTSTIIDEKEAKRLNKKIKKGEFNFNDFLAQL
                     ESVKKLGSMKSLIGMIPGLGNMANQIKDIDLDNSKEIKHIKAMIDSMTPKERENPDLL
                     NNARKRRIAAGAGIGQIEVNKFLKQFSNAAKLAKRFSNKDSMKGFASMMANSNRPR"
     gene            1669..1896
                     /gene="rpsP"
                     /locus_tag="RPW04_000530"
     CDS             1669..1896
                     /gene="rpsP"
                     /locus_tag="RPW04_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDX6294648.1"
                     /translation="MATVVRLTRMGRNKRPFYRIVVTDSRKRRDSGWIESIGYYNPMV
                     EPEVVKVDADRLAYWKSVGAKLSDRVARITK"
     gene            1902..2147
                     /locus_tag="RPW04_000531"
     CDS             1902..2147
                     /locus_tag="RPW04_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HDX6294649.1"
                     /translation="MVEEFLKEYAKLIADCPELIKTEKIHLGENFDEIIIYASKSDTG
                     RLIGKDGKMINAIKTVIIGCKAKDPTSYRITVKAIEE"
     gene            2137..2667
                     /gene="rimM"
                     /locus_tag="RPW04_000532"
     CDS             2137..2667
                     /gene="rimM"
                     /locus_tag="RPW04_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA processing protein RimM"
                     /protein_id="HDX6294650.1"
                     /translation="MKSDFVEVCILGKTVGLKGALKLHDRSDFPNQFKNGAKFYDINS
                     KEFVIKSYDRNNNLVIFENYDSIDLAKTLVNYILYRSINDTIRDCKLAKDEFFYFDII
                     GCNVFEDKILLGEVIDILEVGAGFLFSIKTEGDLVKAGLNSNFYIPYNDNFTQNIDIK
                     SKKIQVKNSLDILKNS"
     gene            2671..3369
                     /gene="trmD"
                     /locus_tag="RPW04_000533"
     CDS             2671..3369
                     /gene="trmD"
                     /locus_tag="RPW04_000533"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDX6294651.1"
                     /translation="MQFNFITIFPNLIKPYFDDSILSRAIKSSIIKLNFINPRDFSAD
                     KHLKVDDYMIAGGAGLLMKAQPVFDAIDSLDSTHIIYLTPAGKKFTQNDAKRLSKFEN
                     ITFICGRYEGIDERIIEEKVNEVFCIGDFIMTGGELGALCMCDAITRNLNGVLGNPNS
                     LDIESFEYGMLESPSFTKPNVYNGLSVISAFLKGNHGKINALKNNMALCKTRFFRPDL
                     YQKLRSPKKQKEKR"
     gene            3366..3722
                     /gene="rplS"
                     /locus_tag="RPW04_000534"
     CDS             3366..3722
                     /gene="rplS"
                     /locus_tag="RPW04_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDX6294652.1"
                     /translation="MRNKYIEAFENAQIENKSVPDFRAGDTLRIAIRIKEGDKTRVQN
                     FEGICIARRGSGSGETFIIRKIGANSVGVERIFPIYSESLESITVLRRGRIRRSKLFY
                     LRDRRGKAARIKELKK"
     gene            3830..4168
                     /locus_tag="RPW04_000535"
     CDS             3830..4168
                     /locus_tag="RPW04_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family ligand binding domain-containing
                     protein"
                     /protein_id="HDX6294653.1"
                     /translation="MEKIVFNTTSFDGVKAIKLVETNFSKEIRISMQSGSIMAEHKAP
                     ATIIVQVLKGSIMFYVNEKESRLDEFDLITLDANIPHSLEALSDSIIRLSLAKSDSES
                     RVFNVTNLKH"
     gene            complement(4170..6107)
                     /locus_tag="RPW04_000536"
     CDS             complement(4170..6107)
                     /locus_tag="RPW04_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HDX6294654.1"
                     /translation="MKHIFGFFTIIAIAIFAALIYFYSQIRVDISAIVEYKPKLTTQI
                     FDRNGDLVANVFDEENRQYAKYQEIPPRVVEALVAVEDTSFFEHGGINVKAIFRAAIK
                     DIKAMSLVEGASTLTQQLIKNMVLTRDKKFTRKLKEVILAFKIEEDLTKEEIIERYLN
                     QVYFGHGYYGIKTAALGYFKKELNELTIKETAILVGLPKAPSNYDPTRHIDLSLSRAN
                     GVITRLYALGWISENEYAQALKETPVVYDETLTQNRAPYLVDETLKEAYKIFPDIKYG
                     GYKITLNADLKVQEIAQNALKFGYNEILKRDKNADQNYLNGAMIVTNPANGEILALVG
                     GIDYAKSNFNRATQSERQPGSSFKPFIYQIALDLGYSPMSKVADISRVFENVNRSEED
                     KDWKPKNYGGNFEGYITLKHALRQSRNLATINLLNSIGLDVVQQKLSYFGFNNIPQNL
                     SIALGSFGVSLINFSEYYSMFAGLGEQSKSRLIKSIESTNGTLTTYEQESSKIIDPQQ
                     AYLMIDMLKDVVNAGTGRNAKVEGIEVAGKTGTTNNNVDAWFCGFTPEVQAIIWYGND
                     NNLPMRKIEGGGRTAAPVFKEFMTNYIEAFPQTKRKFETPNGVYHKIYEGIDEIYTST
                     SPLPSQKTDAISTQESDGLIF"
     gene            complement(6104..6649)
                     /gene="maf"
                     /locus_tag="RPW04_000537"
     CDS             complement(6104..6649)
                     /gene="maf"
                     /locus_tag="RPW04_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012139988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HDX6294655.1"
                     /translation="MIILASSSPSRANILSQFNIEFKQIIMEYDESSIPKTSAKSYSM
                     NVVTEKSKQFFSKFKDEFANVLFADSSVICNNIILNKAKDIDEARWMLNLQSGNFTSV
                     YTAMKFFGNKFCIDMLSVATYKFNIFDKDDMQNYLSSGLWQKKAGAMMIEGFNEKYIQ
                     KSYGNKQTAMGLDIKSLKVFL"
     gene            complement(6649..7143)
                     /locus_tag="RPW04_000538"
     CDS             complement(6649..7143)
                     /locus_tag="RPW04_000538"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294656.1"
                     /translation="MNVTNTAFARIDQIAPFIHISSSVLFIAVQLSVVIFSRYFFKDI
                     EQNTHRYKTILKEFRRFMISELCLISVICISGIFLLSRDEFKISDPMIEAIVATKWAL
                     MLFILSNIAYMWHKFNLAKNAFLNDEVIGTHENLVLIIYYFTPLNIVLSFISIYLGIT
                     FRGI"
     gene            complement(7140..9677)
                     /gene="alaS"
                     /locus_tag="RPW04_000539"
     CDS             complement(7140..9677)
                     /gene="alaS"
                     /locus_tag="RPW04_000539"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDX6294657.1"
                     /translation="MDIRKEYLDFFKSKGHEIIASAPLVPDDATLLFTNAGMVPFKSI
                     FTGDVPRPNPPIRTSCQTCIRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGEYFKKDA
                     ISYAWEFVTEVLKLPKDKLYVTVHEKDDEAYELWQKFIQKDRIYRFGDKDNFWAMGDT
                     GPCGPCSEIFYDQGSEHFNSDEDYMGGDGDRFLEIWNLVFMQFERSKDGTMTPLPKPS
                     IDTGMGLERVTAIKEDKFSNYDSSLFMPLINEVAKLCHKQYEYKTGASYRVISDHIRS
                     VTFLLAQGVNFDKEGRGYVLRRILRRAVRHGYLLGIKEPFMYKLVDKVVELMGEHYSY
                     LKEKKEYVKELIKLEEERFLATIVAGLDLFNEELAKTSSNVFSGEVAFKLYDTYGFPL
                     DLTADMLREKGLSVDEAKFDALMNEQKARAKASWKGSGDAAKESGDFKTLLEEFGENK
                     FIGYDNLKSSSKVLALLNSEFKRVNELKNGEIGYVMLDSTPFYAQSGGQCGDTGMLGE
                     NQALDTKKYFGLNLSMIEAKNSIKIGDIVLCEVSLNRLEIRRHHSATHLLQAALRNVL
                     GAHIAQAGSSVEADKLRFDFSHPKPVTKEELEKIENFVNEAILKGAPAKIEIMDIQNA
                     KKSGAIALFGEKYADKVRVLTLGPSKELCGGTHVENLNEIGSFFIVRESGVSAGVRRI
                     EAVCSKAALELSKEFRKEINDIKDSLKGADPLLSIKKLKDEIKSLQNDLKNASNTKDL
                     DVKDINGVKVVVSKFDGDIKSKIDELKNKFDKVVVFLAGVKDGKVSLGSGSKNTSIKA
                     GELVKTVAPIVGGGGGGRDDFATAGGKDESKIDEALNAATKFISEKL"
     gene            9895..10104
                     /locus_tag="RPW04_000540"
     CDS             9895..10104
                     /locus_tag="RPW04_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011989570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HDX6294658.1"
                     /translation="MAKDSNQNELNNADSVTVIKDLKIKGASATIKRGTTVKNIKLIS
                     KDNEVECKIPGIGTVVLKAEFLKKI"
     gene            complement(10136..11056)
                     /locus_tag="RPW04_000541"
     CDS             complement(10136..11056)
                     /locus_tag="RPW04_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDX6294659.1"
                     /translation="MEYIFNALLPICLIISTGYFFKSIKFPSTEFWPKMDKFTYYVLM
                     PCLLIYELGSVDLDIKSTINIVFSSLSSLGIMLVILVLLNLIIRFKNAEFTSVVQGGI
                     RFNTYVFLALTSAIYGKDGLVVAAIIIAFAIPFVNILCISIFAIYIKNGKFSMQNFIK
                     TIVKNPLIVACIVGYILNLANAYIPTFIFKSLSIVSHAALPMGLLSVGVGFELRSISS
                     AKKEILVSSFAKLVLLPIIAYLLAKLMGANGLYLAVATLYAAMPTAPTSHILSRELGG
                     DVNLMSSITTFEILLSMATLFVIIPMLGSM"
     gene            11175..12482
                     /gene="rmuC"
                     /locus_tag="RPW04_000542"
     CDS             11175..12482
                     /gene="rmuC"
                     /locus_tag="RPW04_000542"
                     /inference="COORDINATES: protein motif:HMM:NF014680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HDX6294660.1"
                     /translation="MEIYILLSLVIFVFGALIFYQFLKIDKFKFELKLQNERFLNLQI
                     KFDENRFELLNLENKIQNLNEQKMEGEIEKAKLKTKLDEQINLNLELKARQDELDLKT
                     REYFELKTKEMSQHLLNLNTKSLGENSQKILENLINPLKNEIEKYQKESVNTSTIFKA
                     NFENLKTETKNIISQAKNLADALNGNKKVLGNWGEIQLDSVLEASGLINGKNYFKQVG
                     YKDKDGNQKYLDVVVDFGESKKAIIDSKCSLVNYNAYFNAQSDEQKNQFAKALAGDIK
                     KHIELLSSKEYQDYDTKTYEYIFMFVPNDSIFYTALNQDSTIYEYAYEKGIFITTPLT
                     LLMALKTVYICWRNLKSDENAMRILSEAGRMYDKFRVFTEQFDKLESQLNTVIKTVSS
                     SKTTLYDGSGNLLSRFENLKKLGAKTNKNISKIYNESAENNLI"
     gene            12592..13635
                     /locus_tag="RPW04_000543"
     CDS             12592..13635
                     /locus_tag="RPW04_000543"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006017793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II asparaginase"
                     /protein_id="HDX6294661.1"
                     /translation="MCLKKVFILMLITISAMFAKPTIYILATGGTIAGSSSSSLSSGY
                     TSGTVTVDKLIAAVPQINEIATIKGEQVSNIGSQEMNNEVWLKLAKRVNELLASKNVD
                     GIVITHGTDTMEETAYFLNLVVKSDKPIVMVGAMRNSDSLSSDGPLNLYNAVNVAIDK
                     EAAGKGVLVVMNDEIHAAREVAKTNTTAVNTFVSPNSGKIGTVIYGNVKFYMQPTRKH
                     TKNSDFDISKIGSLPRVDIIFSHSNDNPDFVNASLENGAKGIINAGMGNGNIYPSALE
                     ALAKAVKDGVIVVRDSRVGSGETTNPGEIDDAKYGFLTSDNLNAPKARVLLMVALTKT
                     SDPKKIGEYFLTH"
     gene            complement(13672..14148)
                     /locus_tag="RPW04_000544"
     CDS             complement(13672..14148)
                     /locus_tag="RPW04_000544"
                     /inference="COORDINATES: protein motif:HMM:NF025716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4405 domain-containing protein"
                     /protein_id="HDX6294662.1"
                     /translation="MKASKPIGTTATIVTFIVVGITGVLMFFDIKSSGIKVLHEYIGM
                     AMVIACVLHIMANLTPFKKYFAGKKLAIMGVLFAASVVFIAATPNNPKPPLKDVYQNF
                     TNLNLSTAEKIFGTNESLFNEYLNKNGLKFEDISVKEFAAKNNIKENDLVKKLLNK"
     gene            14258..14872
                     /locus_tag="RPW04_000545"
     CDS             14258..14872
                     /locus_tag="RPW04_000545"
                     /inference="COORDINATES: protein motif:HMM:NF013933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HDX6294663.1"
                     /translation="MDWILFITSFFLAALSPGLNMLMALTIGLSAGYKRAFLFILSST
                     VCIAAIVFLSGIGIGFLITKFPFFFTVLRIFGAFYLFFIAYKMFLATKINSNIKIDVR
                     NLSSKAIVFQGFVSSFGDPIIWGFMISLLPKFMDVHNPFNSTFAAFIIVIACIEFAAT
                     NIYATFGSSVKKFFSSSFKVINKISATLFLLLGVWMLFDVFKSF"
     gene            14881..15414
                     /locus_tag="RPW04_000546"
     CDS             14881..15414
                     /locus_tag="RPW04_000546"
                     /inference="COORDINATES: protein motif:HMM:NF013933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
                     /protein_id="HDX6294664.1"
                     /translation="MDWLLFITTFWVISLLPGLNMTLALSLGMSVGYKKTLFMMAGAT
                     ISLGIVAFVCAVSVGAVLAKFPIFFQIFTVICASYLLYLSYKMFLGSKFNLDEKAKDI
                     SSKALFWQGFMSSVSNPKAWAFFTALFPLFIDSVSPFGIRLYMMILVLMFIEIIDFNI
                     YALGGVALKNCLKLKLI"
     gene            15522..16001
                     /locus_tag="RPW04_000547"
     CDS             15522..16001
                     /locus_tag="RPW04_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDX6294665.1"
                     /translation="MSKVWKFKDNIDTDIIIAARYLNTSNPDELAKHIMEDADKDFYS
                     KVTKGDIIVAGENFGCGSSREHAPLALKAAGISVVIARSFARIFYRNSFNTGLLILEC
                     QKTDDISEGDNLEVDFSGGIIKNLTQKTEYKFEPIPEFMQELVRSGGLINYAKKSLN"
     gene            16026..17096
                     /gene="leuB"
                     /locus_tag="RPW04_000548"
     CDS             16026..17096
                     /gene="leuB"
                     /locus_tag="RPW04_000548"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDX6294666.1"
                     /translation="MNRYNICVIKGDGIGPEIAEEAIKVLDSVSAKFGFELNYEYFLM
                     GGAAIDVFGVPLPDETLESALKSDAVLFGAIGGSKWDNLPRDLRPESGLLKLRKSLGA
                     YANLRPALIFDELINASTLKPEVLQNVDLLVVRELTGGLYFGEPRQKDTNRAFNTMVY
                     TTQEIERISKIAFEAAMKRDKKVCLVDKANVLETSQLWREVASKVAKDYPEVSLEFMY
                     VDNASMQLVRNPAQFDVILTENLFGDILSDEASMICGSIGLLPSASIGGKVGIYEPIH
                     GSAPDIAGQGIANPIAMILSAAMMLKYALNKNEAANDIEKAVRAVLRDGYRTKDIAKF
                     DAKEICTTSEIGSIISDYVKKI"
     gene            17093..17344
                     /locus_tag="RPW04_000549"
     CDS             17093..17344
                     /locus_tag="RPW04_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294667.1"
                     /translation="MKNTITEALIYENQGLRNDALEVYKNILKAEPHNQEAQSAVRRL
                     SGLRRKNVYVNEQMLDFFLNLKTDDEIGIREFKRWLVKI"
     gene            17341..17688
                     /locus_tag="RPW04_000550"
     CDS             17341..17688
                     /locus_tag="RPW04_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294668.1"
                     /translation="MKLEDIAKITIDEVTAELEKIQKLDEIRGDIVSVEESVANRVEN
                     DDKSTIKPEFKDESVNSEIIFLKNLKERIGVLFEGLNSSDNSNMELKLDLTIKFLEFA
                     LANIEHRLTNLSK"
     gene            17765..18754
                     /locus_tag="RPW04_000551"
     CDS             17765..18754
                     /locus_tag="RPW04_000551"
                     /inference="COORDINATES: protein
                     motif:HMM:NF013871.1,HMM:NF024041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HDX6294669.1"
                     /translation="MLLGAKNIDFDIEVYDIDPFKFENIMHDIGATGVGKSYFVYKYK
                     NYDISLPRTESKNGIGHKAFIVSYCNDEKIASKRRDFTMNAMMINIFNGEILDFWGGR
                     KDIQNKILKIVDKHSFCEDSLRVLRAVQFAARFGLKADEQSLKIMRNISIDDLSKDRI
                     RSELEKFFIAPHKTFGIELLSDLGLDKRLFGVKFEPDSFGKIVQQHFNITHDSRSFLY
                     DLINFYKLNPKEILDSLSLGKFYKKLINEPFLKRASRYEMMKIALSMPLSNWLGLNTK
                     NRVRMAVDLGFYDKTFNPNIDISKLSHLRGKDLGEHLKVLKELEIKAFLKDKR"
     gene            18751..19629
                     /locus_tag="RPW04_000552"
     CDS             18751..19629
                     /locus_tag="RPW04_000552"
                     /inference="COORDINATES: protein motif:HMM:NF014587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbA"
                     /protein_id="HDX6294670.1"
                     /translation="MICIDLGSNTIRVCAMDDNLEITQSYEKIVGSARNLSSEGLSMA
                     AKMRITEALGEIIVTFDFKNDSHIAVATEAFRLASNAKDFFYDIERDFGIKFNIISGN
                     LEAKLARLGVENRALKLGFHIDESLLIDLGGASTEISFANEFKSFKFGIVRFCEECCS
                     DEAKFKIVAKDKIQDALSFISKFNFKNIILTSGVPTSVVALKLGLKYDNYDAKMINGA
                     ILDLEDFDAALLKLSLSNDKDSLVGKNRASLVIAGIYLLKPILEEFSVPYIVIDDGLR
                     EGIAVASKLGLLNLKE"
     gene            19632..20078
                     /locus_tag="RPW04_000553"
     CDS             19632..20078
                     /locus_tag="RPW04_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HDX6294671.1"
                     /translation="MSVKERILNDIKEAMKSKDNFRRDTLRMISSAFKQIEVDERITL
                     SDERIFAILQTEIKRRNESASQYKAGGREDLEQKELEEVNIISSYLPTQLSDCELEEK
                     LQNLISKNNFASIKDLGALMKVAKEELGASCDGKRMSDCAKKMLTK"
     gene            complement(20166..21362)
                     /locus_tag="RPW04_000554"
     CDS             complement(20166..21362)
                     /locus_tag="RPW04_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000467802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDX6294672.1"
                     /translation="MSIFSKNSSFDEKLYEQILYVATQAANGKLEARITDVDKNSKLT
                     QIAVCINNLLDQIEALQREIDTSIKASRNGLEYRNIYTQGFKGLFKVNAKSMSEGVSG
                     VLEGEKGKIRGILSQKLCELGNGNKGIADIKKDLQKSVKDLNQVVSSSQTTATLAQDS
                     IKNVNELCVNFDNITKNSNQTTQTINQRANEISNVISLIKDIADQTNLLALNAAIEAA
                     RAGEHGRGFAVVADEVRKLAENTTKATNDIDLNVNLLSQEADELNKNSDMINKIAQTA
                     AKNTQDLKDALSKFSFDAQNTAQIAELTQNKTMGILTKLDIVMYKTAAYNNTLNQLGC
                     TQELSDQESDIINNYKNSFESRFTKDKFCIKTKEELHAITDMVKQNVSESKSGYNLQN
                     IDKFIN"
     gene            complement(21365..21880)
                     /locus_tag="RPW04_000555"
     CDS             complement(21365..21880)
                     /locus_tag="RPW04_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HDX6294673.1"
                     /translation="MKDSLGLLEKDIDEEAFLVSKTDLKGDITYCNQTFLEVVNSKNK
                     DLIGKHHNIVRHPDMPKFVFQLLWKRIKNKQEIFAFVKNRTFDQAYYWVCANVTPSID
                     EHGNIIGYYSVRRKASKEAIKTIVPIYQKMVELEKTGGVEASSKFINSFLTQNNTTYD
                     CFINNLQRSKG"
     gene            complement(21944..23185)
                     /locus_tag="RPW04_000556"
     CDS             complement(21944..23185)
                     /locus_tag="RPW04_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDX6294674.1"
                     /translation="MKIYEVEQIIKAKRNKIYIKAENRVEAKETAMKQNRGIVIKVTE
                     TKTVPLDMQISEIKQKLTQKLLYPKVKIPNLVACIRQLSVMTNAGISIHDSIKEVIKS
                     TTDKRLKLIFENVNDDLNAGMSITESLNLYSDELGNVVIAMVRLGEESGNMAESLQKL
                     AEILQEIWDNQRKFKKAIRYPTLVICAIAIAFVLLMVLVVPTFRDIFEQLNAELPLPT
                     RILLNIEYLITNYGFICLGGIVLFLFILTNLYKKNGKFKNIFDKYILKVYLIKNIIFF
                     SSMSRFNLIFTELVRAGIPINDALDTACVTISNSYIKNKLLGVKVNVQRGNPLNYAFS
                     ETKLYEGMLLQMISAGEKSGSLDSMLEKVTDYYKEKFNTLIDNISSYIEPILLVFIAA
                     TIILLGLGIFLPMWDMANAVK"
     gene            complement(23182..24978)
                     /locus_tag="RPW04_000557"
     CDS             complement(23182..24978)
                     /locus_tag="RPW04_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HDX6294675.1"
                     /translation="MNEKNDISGPEFYQNKNAQLSQIDKQVLLTLIRDGKLSQNNAND
                     LETKINANNIKDILMEYANISYDDFINTILDLYRRDRVTLKDITDHFLLDLEEFLKDV
                     AKQFRLEYLNLENIKLNYNLIEKVSAVQLKKLGALPIKEDEINVYVALKNPFDLDAQD
                     RIGHIFNRKLLKVVVCDPNNIDKYMSKIELNESVKGIINEIRKELGSQTTQDSDSSGI
                     LKLIETILRISIQNRASDIHIEPTETNCIVRSRIDGMLAETFVFDKDIYPPLISRIKL
                     LSNMDIAERRKPQDGRFSAHILNREYDFRISTLPILNGESLVLRILDKSKVVISLENL
                     GMRQQNFSKFTHSMHQPYGIILVTGPTGSGKSTTLYGALNDIKSVEKKIITVEDPVEY
                     QLNMIQQVHVNEKAGLTFSVALRSILRQDPDIIMIGEIRDQDTLRIAIQAALTGHLVF
                     STLHTNDAISAITRMIDMGVESYLVSGALIAIEAQRLIRKLCPHCKQKIALSANIIKD
                     IQKQLPSEYQFYKSVGCELCSQTGFLGREMISEILPISDKISSMIASEASKDELKKVA
                     YEEGFTDMFYDGIIRAANGITTIEEIYRVAKV"
     gene            complement(24991..25920)
                     /locus_tag="RPW04_000558"
     CDS             complement(24991..25920)
                     /locus_tag="RPW04_000558"
                     /inference="COORDINATES: protein motif:HMM:NF024299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDC27 family protein"
                     /protein_id="HDX6294676.1"
                     /translation="MLDSYEIQEMENKWKKYNRNRNKKLYMLSATILICLSISISAGY
                     FIDLYMKKQSDMLQNEIANINLKKHVNELKEKAKIAKQKLEQQRAQDEKELLEQAKKM
                     DVGFNLDIEKQTTLDESLPNQQTKQKIKDIKTADNNNVLIPKIISQNALPNLNDSEIT
                     NQRIISDLPLPQDTKILEFSETNQSESNQYQNQAQNKNQAQNSIKIESQTIDMSVESL
                     KSKFDSTNDIKYAILLAEEFYKQNDYENAIKWAFTINSIDENEVKGWVIFAKAKYKIG
                     KKEDALTVLNALQEKNRSASIEELIEQIKKETL"
     gene            complement(25913..>26284)
                     /locus_tag="RPW04_000559"
     CDS             complement(25913..>26284)
                     /locus_tag="RPW04_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDX6294677.1"
                     /translation="LFKILFTVHKTDEEDTLAKDYFRTRIWENIELESSSLDEICLYI
                     EKKLVFHNLHSYFDMYNINHIKLIYKLTNGNLRVLNKLLYKIYEIYEYYEESRPSTIK
                     NRRLLKKVVEMAAIDSGLINA"
BASE COUNT         8436 a         4071 c         4513 g         9264 t
ORIGIN      
        1 aaatatttat gtgtaataaa attatctttt tattaatata ttttattata ttttttcttt
       61 atgtataata aatttttacc ataaaaatat tataattata tatttatagt attattttaa
      121 attttattaa atttttgtat atagatactt gctaaacaaa aatagattta catcaaaaaa
      181 gcatttaaac aatttcaaag taaatagaag ctataattag caccttttaa taaaatttat
      241 aaaggtaaat tgtgtttgaa cttataggtg aatcattaaa atcagctgtt aataaactta
      301 aatttgtcga tgatgaaaag gcgcttaaaa atgcgcttga taccctaaaa aaagcacttt
      361 taaaagcaga tgttcatcac aaagttacta aagaattagt gaatttagta gaatccgacc
      421 ttaaaaagac ttcaattggt caaaaacaat ttttagatag cattaaatca aatttaacaa
      481 gtattttaac tgctccaaac gacggaaata aaggtagcgg ctttgtttat gcgagcaatc
      541 ctccaaccgt agttttgatg gccggacttc aaggtggcgg aaagacgact actaccgtaa
      601 aactagctaa ttatctaaaa gttcgtaaga aaaaagtttt aatcgcagct tgcgacttgc
      661 agcgtttagc cgcagttgag caattgcgtc agctttgcac cgcaaatgag cttgagctat
      721 tttatatgga aaatgaaaac gatcctataa aagtagctaa aaatgcctta caaaaagcaa
      781 aaaacgagtt gtatgacgtt cttttagtcg ataccgcagg tcgtcttgct atagatgaaa
      841 ctcttatgag tcagataaaa gatattaaat caactataaa tccgcatgag atattttacg
      901 tagctgatgc tatgagcgga caagacggcg taaaaactgc tgctagcttt aatgaggcgc
      961 ttggcataac aggcgtgatt ttaagtaaat ttgacgctga tacaaaaggc ggcgttgcta
     1021 ttggcatagc aaaacagata aatattccgc ttagatttgt cggtgtaggt gaaaaaccgg
     1081 cggatctaga gagctttata ccagatagaa tcgtcggtcg tataatgggc gagggcgatt
     1141 tggcaacgct tgctgaaaaa acaagcacga taatagatga aaaagaagca aaaagattaa
     1201 acaaaaaaat caaaaagggt gagtttaatt ttaatgactt tttagctcag cttgagagtg
     1261 ttaaaaaact tggaagtatg aaaagcctta tagggatgat accgggtctt ggaaatatgg
     1321 caaatcagat aaaagatata gatcttgata atagcaaaga gataaaacat ataaaagcta
     1381 tgatagattc tatgactcca aaagagcgtg aaaatccgga tcttttaaat aatgctagaa
     1441 agcgtagaat tgcagctgga gcaggaatag gtcagataga agtaaataaa tttttaaaac
     1501 agtttagcaa tgcagcaaaa cttgctaaaa gattttcaaa taaagacagc atgaaaggat
     1561 ttgcttctat gatggcaaat tcaaatcgcc ctagataaat ttagggctta cttatggcta
     1621 aaatttagct ataattaagc cttaaaaaaa ataatgagga gaaaaataat ggcaacagta
     1681 gttagactaa caagaatggg gcgtaataaa agaccatttt atcgtatagt tgttacagat
     1741 agtagaaaaa gacgtgatag cggttggata gagagcatag gatactataa tccaatggta
     1801 gaaccagagg ttgttaaagt tgatgctgat aggcttgcgt attggaaaag tgttggtgca
     1861 aaacttagcg acagagttgc tcgaataaca aaataatcac aatggtagaa gaatttttaa
     1921 aagagtacgc aaaactcata gccgattgtc ctgagctgat aaaaaccgaa aaaatacatc
     1981 ttggtgaaaa tttcgatgag ataatcatat atgcaagtaa atccgatacg ggtagactta
     2041 taggcaaaga cggaaaaatg ataaatgcta ttaaaacagt gattataggc tgcaaagcaa
     2101 aagatccaac atcatataga attacggtaa aagctattga agagtgattt tgtagaggtt
     2161 tgcatacttg gaaagactgt tggtttaaaa ggggctttaa agctccatga ccgcagtgat
     2221 tttcctaatc aatttaaaaa tggtgctaaa ttctatgata taaatagtaa agaatttgtc
     2281 ataaaaagtt atgatagaaa taacaatctg gtaatttttg aaaattatga tagcatagat
     2341 cttgctaaaa cgcttgtgaa ttatatctta tacagaagta ttaatgatac tataagagat
     2401 tgtaagctcg caaaagatga atttttctat tttgatatca taggttgtaa tgtttttgaa
     2461 gataaaattt tgctcggaga ggtaatagat atattagaag ttggagctgg atttttattc
     2521 agtataaaaa cagagggcga tctcgtaaaa gccggtttaa attccaattt ttatatacct
     2581 tacaatgata attttactca aaatatagat ataaaatcta aaaaaattca ggttaaaaat
     2641 tcgttagata tattaaaaaa ttcataaatt atgcagttta actttataac tatattccca
     2701 aatttaatta aaccgtactt tgatgactcc atactttcaa gggcgatcaa gagtagtatt
     2761 ataaagttaa acttcataaa tccaagagat tttagcgcag ataagcattt aaaagtagat
     2821 gattatatga tagctggagg tgcagggctt cttatgaaag ctcagcccgt atttgatgct
     2881 attgactcat tggatagtac tcacattatc tatcttactc cagcaggtaa aaaatttact
     2941 caaaatgacg caaaaagact atctaaattt gaaaatatta cttttatttg cggaagatac
     3001 gagggtattg atgagagaat tatagaagaa aaagttaatg aggtattttg tataggtgat
     3061 tttataatga ccggcgggga gcttggagca ctttgtatgt gcgatgctat cacaagaaat
     3121 cttaatggag ttttaggcaa tccgaattcg cttgacatcg agagttttga gtatggaatg
     3181 ctagaatctc cgagttttac taagccaaac gtatataatg gtttgagcgt tatttcagct
     3241 tttttaaagg gtaatcatgg taaaatcaac gctttgaaaa acaatatggc gttgtgtaaa
     3301 actaggttct tccgccctga tttatatcaa aaactcagat cgccaaaaaa acagaaggaa
     3361 aaaagatgag aaacaaatac atagaagcat ttgaaaatgc tcaaattgaa aacaagtctg
     3421 tgcctgattt tcgtgctggc gatactttaa gaattgctat tcgtatcaaa gaaggcgata
     3481 aaactagagt tcagaatttt gaaggtatct gtatagctag acgcggtagc ggttctgggg
     3541 agacttttat catcagaaaa ataggtgcaa atagtgttgg agttgagaga attttcccta
     3601 tttatagcga aagtttagag agtattacgg ttcttagaag aggacgtata agaagatcta
     3661 agctatttta tctaagagat agacgcggta aagctgcaag aattaaagaa cttaaaaaat
     3721 aattataact tttataatat cacgtcaaaa aaggcgtgat actcttaatc tatatcaatc
     3781 aattttatct taaaatttac tataatattt taaaatttaa aggaatatta tggaaaaaat
     3841 agtatttaat acaacatctt ttgatggcgt aaaagcaata aaactagtcg aaactaattt
     3901 tagcaaagag attagaatat ctatgcaaag tggatctata atggccgaac ataaagctcc
     3961 agctactatc atagtgcagg ttttgaaagg ctctattatg ttctatgtaa atgaaaaaga
     4021 aagtaggctt gatgagtttg atctcataac tcttgatgcg aatattccac attctttaga
     4081 agctttaagt gactctataa ttagacttag tttggctaaa tctgatagtg aaagtcgtgt
     4141 ttttaatgtt acaaatttaa aacattaaat taaaatatta acccatcgct ctcttgagta
     4201 gagattgcat ctgttttttg tgaaggcagt ggagaagtac ttgtatatat ttcatctatg
     4261 ccttcataaa ttttatgata tactccattt ggggtttcaa atttacgttt agtttgagga
     4321 aatgcttcta tataatttgt cataaactcc ttgaatacag gagctgcggt tcttccgcca
     4381 ccttctattt ttctcatagg tagattatta tcgtttccat accagataat ggcttggact
     4441 tcaggagtaa atccgcaaaa ccacgcatct acgttattat ttgtagttcc tgtctttcct
     4501 gctacttcta taccttcaac ttttgcattt cgcccggttc cggcatttac gacatctttt
     4561 agcatatcta tcattaaata cgcctgctga ggatctatga ttttagaact ttcttgctca
     4621 tatgttgtta atgtgccgtt tgtgctttcg atggatttta ttagccttga tttgctctgc
     4681 tctcctaaac ctgcgaacat tgagtaatat tcgctaaagt ttataaggct tactccaaaa
     4741 cttccaagtg ctattgaaag attttgaggt atattattaa aaccaaaata tgaaagtttt
     4801 tgctgaacta cgtctaatcc tatagaattt aaaagattta tggtggctaa attacgagac
     4861 tgtcttaaag catgtttaag agttatgtat ccttcaaaat ttccaccata attttttggt
     4921 ttccagtctt tatcctcttc gcttctattt acattttcaa atactcttga tatatctgct
     4981 actttactca taggagagta gccaagatca agagcgattt ggtatatgaa tggcttgaag
     5041 ctagatcctg gttggcgctc actttgcgtg gcacggttga agttactttt tgcgtagtcg
     5101 atacctccga ctaatgctag tatttcacca tttgcaggat tagttactat catagcgccg
     5161 tttagataat tttgatctgc atttttatct ctttttaata tctcgttata tccaaattta
     5221 agcgcatttt gcgctatttc ttgtactttg agatcggcat ttaatgtgat tttatatcca
     5281 ccgtatttta tatccggaaa tattttataa gcttctttta atgtttcatc tactagatac
     5341 ggagccctgt tttgtgttaa tgtctcatca tatactacag gagtttcttt taaggcctga
     5401 gcgtattcgt tttcacttat ccagcctaat gcatacagtc ttgtaataac tccattagca
     5461 cgtgacaaag atagatctat gtgtctagta ggatcatagt tactaggtgc ttttgggagt
     5521 cctactagta tagcagtctc ttttatagta agttcattta actctttttt aaaatatccg
     5581 agtgctgctg tttttatacc ataatagccg tgtccaaaat atacttgatt gagatatctt
     5641 tcgataattt cttctttggt cagatcttct tctatcttga atgctaaaat aacctctttt
     5701 aatttacgag taaatttttt atcgcgtgtt agaaccatat tttttatcag ttgttgagtt
     5761 aaagtggagg ctccttctac taatgacatt gcttttatat cttttatggc tgctctaaaa
     5821 atagctttta catttatacc tccatgctca aaaaagcttg tatcttcaac tgcgactaat
     5881 gcttcgacaa ctcttggagg tatctcttga tattttgcat attgtctatt ttcttcgtca
     5941 aaaacattag ctacaaggtc tccatttctg tcaaaaattt gagttgttag ttttggttta
     6001 tactctacta tggcagatat atctactctg atttgtgagt aaaaatatat aagagctgca
     6061 aatatcgcaa ttgcaattat agtaaaaaag ccaaaaatat gcttcataaa aataccttta
     6121 aactctttat atcaagtccc atggcagttt gtttattacc atagcttttt tgtatatatt
     6181 tttcattaaa tccttctatc atcatagccc ccgccttttt ttgccaaaga ccactactta
     6241 gatagttttg catatcgtct ttatcaaaaa tattaaattt atacgtagca acgctaagca
     6301 tatctatgca aaatttattc ccaaaaaact tcatcgctgt atatacgcta gtaaagttac
     6361 cgctttgcaa gtttaacatc catcttgctt cgtctatatc ttttgcttta tttagtataa
     6421 tattattgca aataacacta ctatcggcaa ataaaacatt tgcaaattca tctttaaatt
     6481 tagaaaaaaa ctgctttgat ttttctgtaa caacattcat agagtatgat tttgccgatg
     6541 tttttggtat ggagctttcg tcatattcca tgataatttg tttaaattct atattgaact
     6601 gagatagtat attcgctctt gaaggagaac tagaagccag tataatcatc aaattcctct
     6661 aaaagttata ccaagatata tgcttataaa cgataaaact atatttaatg gagtaaagta
     6721 atatatgatt aaaactaaat tttcatgagt tccgataacc tcatcgttta aaaatgcatt
     6781 tttggctaga ttaaatttgt gccacatata tgcgatgttt gataatataa atagcatcaa
     6841 agcccatttt gtagcaacta tcgcctctat cataggatct gagattttga actcatctct
     6901 gctaagaaga aatattccgc ttatgcaaat aactgatatt aagcatagtt cacttatcat
     6961 aaaacgccta aattctttca aaatagtttt gtatctatgt gtgttttgct caatatcttt
     7021 gaaaaaatat ctagaaaata taactacgct taattgtaca gctataaata acactgaact
     7081 gcttatatgt ataaacggtg ctatttgatc aattcttgca aatgcggtat ttgttacgtt
     7141 caaagtttct cacttataaa tttagtagca gcatttagag cttcgtctat tttgctttca
     7201 tctttacctc cggcagtggc aaaatcatct cttccgcctc cgcctccacc gactatagga
     7261 gccactgttt ttactaattc tccggctttt atgcttgtgt ttttgcttcc tgatcctaag
     7321 cttactttgc cgtcttttac accggctaaa aatacgacta ctttatcaaa tttatttttt
     7381 agttcatcta ttttgctttt tatatctcca tcaaatttag atactacaac ctttacgccg
     7441 tttatatctt tcacgtctaa atcttttgta tttgaagcgt tttttagatc gttttgaagt
     7501 gattttatct catcttttag cttttttata gaaagcaacg gatctgcacc ttttaaacta
     7561 tcttttatat cgtttatctc ttttctgaac tcttttgata gctcaagtgc cgctttagaa
     7621 caaaccgctt ctatacgcct tactcctgcg cttactccgc tttcacggac gataaaaaaa
     7681 cttcctatct catttaaatt ttctacgtga gttcctccac aaagctcttt tgatgggcca
     7741 agtgttaata ccctgacttt atctgcgtat ttttcaccaa atagagctat agctccgctt
     7801 ttcttagcat tttgtatatc cataatttct atctttgctg gtgcaccttt taagatcgct
     7861 tcatttacga aattttcgat tttttctaat tcttcttttg ttactggttt tggatgagag
     7921 aagtcaaatc taagcttatc ggcttctacg ctacttccgg cttgagctat atgagcacct
     7981 aagacgtttc taagtgctgc ttgaagtagg tgagtggctg agtggtgacg gcgaatctct
     8041 agtctattta agctaacttc acaaagtact atatcgccta tttttatgct gttttttgct
     8101 tctatcatgc ttaaatttag accgaaatac tttttagtat caagagcttg attttcacct
     8161 aacataccgg tgtctccaca ctgtccgccg ctttgtgcat aaaatggagt agagtctagc
     8221 atcacgtatc cgatttcacc gttttttaac tcatttactc ttttaaattc gctatttaaa
     8281 agtgctaaaa ctttgctact gctttttaga ttatcatatc ctataaattt attttctcca
     8341 aattcttcaa gtaaggtttt aaagtctccg ctctcttttg cggcgtctcc gctacctttc
     8401 cagctagctt ttgcgcgtgc tttttgctca ttcataagag cgtcaaattt agcttcgtct
     8461 acgctaagtc ctttttctct taacatatca gcagttagat caagcggaaa tccgtaagta
     8521 tcgtatagtt taaatgctac ttcgccgcta aagacgttgc tagaggtttt tgctagctct
     8581 tcgttaaata gatcaagccc cgctactata gtagctaaaa atctctcttc ttcaagtttt
     8641 ataagctctt ttacatactc ttttttctct tttagatacg agtagtgttc gcccattagc
     8701 tctactactt tatcaactag tttatacata aacggttctt ttataccaag taagtatccg
     8761 tggcgaacgg ctcttcttaa tatacgtctt aatacatatc cgcgtccttc tttgtcaaaa
     8821 tttacgcctt gagctagtaa aaacgtaaca gagcggatat gatcgctgat cactctatag
     8881 ctagctcctg ttttatactc gtactgctta tgacaaagct ttgcaacttc gttaataaga
     8941 ggcataaata gcgagctgtc gtagttgcta aatttatctt cttttatagc cgtaactctc
     9001 tcaagcccca ttcctgtgtc tatagaaggc tttggaagag gagtcatagt gccgtctttg
     9061 cttctttcaa actgcataaa tacaaggttc caaatttcta aaaatctatc tccatcacca
     9121 cccatatagt cttcatcgct gttaaaatgc tcacttcctt gatcataaaa tatctcacta
     9181 caaggtccac aaggtccagt atcacccatg gcccagaagt tatctttatc tccaaagcgg
     9241 taaattctat ctttttgtat aaatttttgc cataattcat acgcttcgtc gtctttttca
     9301 tgaaccgtaa cataaagttt gtcttttggt aactttaaca cttctgtgac aaactcccac
     9361 gcgtaagata tggcgtcttt tttaaagtat tcgccaaagc tgaaatttcc cagcatctcg
     9421 aaaaaagtat ggtggcgcgc tgtataacca acattgtcta aatcattgtg ttttccgccg
     9481 gcccttatgc aggtttgaca gcttgtacga ataggcggat ttggtcttgg aacgtctcct
     9541 gtaaaaatac ttttaaaagg taccattcca gcatttgtaa aaagtaaggt cgcatcatct
     9601 ggtactaggg gagccgatgc tataatctca tgtcctttgc ttttaaaaaa atccaaatat
     9661 tcttttctaa tatccatatt aaatttccta taatttataa aatagctcca attctagcac
     9721 aattttatta aaaaattagt gaatttgtat tttttggtct gattttctac tatttttata
     9781 tttaagtata tttaattgtg cttaaagtat ggaaatggat tatgtattag ttgtaaaata
     9841 ttaatatttc agaataaaga ttgtataata tttttaaatt tacaaaggtc taaaatggct
     9901 aaagatagca atcaaaatga actaaacaat gcagatagcg taactgttat caaagatttg
     9961 aaaataaaag gtgctagcgc cactataaaa cgcggtacaa ctgtaaaaaa catcaaactt
    10021 ataagcaaag ataatgaagt cgaatgcaag ataccgggta taggaacagt tgttttaaaa
    10081 gcggaatttc taaagaaaat ttaaattaat acactagaaa ttatttaaat ttaaactaca
    10141 tagatccaag catcggtatg ataacaaaaa gcgtcgccat agagagtaaa atctcaaaag
    10201 ttgtgataga actcatcaaa tttacatctc caccaagctc tcttgatagt atgtgagacg
    10261 tcggagccgt aggcatcgca gcgtataaag tagccaccgc tagatataaa ccgtttgctc
    10321 ccatgagttt agctagcaaa tacgctatga taggcagcaa cactagtttt gcaaatgagc
    10381 ttactaagat ctcttttttg gccgagctta tcgatcttag ctcaaagcct acacccacag
    10441 ataaaagccc cataggcaat gcggcgtgac ttactataga aagactttta aagataaaag
    10501 taggtatata ggcatttgct aaatttaaga tatatccgac tatacaagca actataagtg
    10561 gattttttac tatcgttttt atgaagtttt gcatagaaaa cttgccgttt ttgatgtata
    10621 tggcaaaaat tgatatgcaa agtatattta caaaaggtat cgcaaacgct atgattatgg
    10681 ctgcgacaac taagccgtct ttaccgtata tcgcagatgt aagagctaaa aatacgtatg
    10741 tgttaaatct gattccgcct tgtacgacgg acgtgaattc ggcgttttta aagcggatta
    10801 ttaaatttaa aagcaccaat ataactagca ttattccaag ggagctaagt gaagaaaata
    10861 ctatatttat agtacttttt atatccagat ccacgcttcc tagctcatat atcagcaaac
    10921 agggcattaa aacataatac gtaaatttat ccatcttagg ccaaaactca gtagatggaa
    10981 atttgatact tttaaaaaaa tacccagtgc ttattatcag acaaataggc aagagcgcat
    11041 taaatatata ttccatgttt tactctggat ctggtttgca aaaagcgcca ttatagcact
    11101 gttggtatat taaatcaaag tttttaagaa aatctaagat ataattttat ctaaaataaa
    11161 attcgggaaa taatatggaa atttatatac ttttatcttt ggttattttt gtttttggag
    11221 ctttgatttt ttatcagttt ttaaagatag ataagtttaa atttgagctt aaattacaaa
    11281 acgaaagatt tttaaattta cagatcaaat ttgatgaaaa tagatttgaa ctactaaatt
    11341 tagaaaacaa aatccaaaat ttaaacgagc aaaaaatgga aggcgagata gaaaaagcaa
    11401 agctaaagac taaattagat gagcagatca atctaaattt ggagttaaaa gcaagacaag
    11461 acgagctgga tttgaaaact agagagtatt ttgagctaaa aacaaaagag atgagccaac
    11521 atcttttaaa tttaaataca aaatctcttg gcgaaaattc acaaaagatt cttgaaaatc
    11581 tgataaatcc tctcaaaaac gagatagaaa aatatcaaaa agagagcgta aatacaagta
    11641 cgatttttaa agcaaatttt gaaaatctca aaacagaaac aaaaaacata atctcacaag
    11701 ccaaaaatct cgcagatgcg ctaaacggta acaaaaaagt gctaggaaat tggggtgaga
    11761 tacagcttga tagcgtacta gaagctagcg gattgataaa tggaaaaaac tattttaaac
    11821 aagtcggcta caaagataaa gacggaaatc aaaaatacct agacgtggtt gtggattttg
    11881 gcgaaagtaa aaaagctatc atagattcga aatgttctct tgtgaattac aacgcgtatt
    11941 ttaatgctca aagtgacgag caaaaaaacc aatttgcaaa agctctagca ggagatatca
    12001 aaaagcacat tgagctactt agttcaaaag agtatcaaga ctacgatact aaaacgtatg
    12061 aatatatatt tatgttcgtg ccaaacgata gcatatttta caccgcgtta aatcaagaca
    12121 gcacgatata cgagtatgct tatgaaaagg gcattttcat cacaactccg cttactcttt
    12181 tgatggcgtt aaaaacggtt tatatatgtt ggagaaattt aaaaagcgat gagaatgcta
    12241 tgagaattct ttctgaggcc ggtagaatgt atgataaatt tagagtattt actgaacaat
    12301 tcgataagtt agagagtcag ttgaacacgg ttataaaaac agtaagttct agcaaaacaa
    12361 ctctatatga tggcagcgga aatttgctaa gcagatttga gaatttaaaa aaacttggtg
    12421 caaaaactaa taaaaatata tctaaaattt ataacgaatc agctgaaaat aatttaattt
    12481 aatttttaat ataaatttat cttgactaaa tcattataaa attgtataat tatattgcaa
    12541 aaactgggat cctagatttt aaactttaaa ttaaaatcga aggagataac tatgtgctta
    12601 aaaaaggtgt ttatacttat gctgattacg atatccgcta tgtttgccaa gcctactatt
    12661 tatatacttg ctactggcgg aactatcgca ggcagctctt caagctctct tagtagcggc
    12721 tatacttcag gaacggttac ggtagataaa cttatagctg cagttccaca aatcaatgaa
    12781 atagctacga taaaaggtga gcaagtaagt aatatcggct ctcaagagat gaataacgaa
    12841 gtttggctaa aactagcaaa acgcgtaaat gagcttttag ctagcaaaaa cgtagatggt
    12901 atcgtgatca ctcacggaac agacactatg gaagagaccg cttattttct aaatttagtc
    12961 gttaaaagcg acaaacctat agttatggtc ggagctatga gaaactcaga ctctttaagc
    13021 agtgacggtc cgctaaatct atataacgcc gtaaatgtcg caattgataa agaagcagca
    13081 ggcaaaggtg ttttggttgt tatgaacgat gaaattcacg ctgctagaga agtcgctaag
    13141 acaaacacta ctgcggtaaa tactttcgtt tctccaaata gcggtaaaat tggtaccgtt
    13201 atctatggaa acgttaagtt ttatatgcag ccgactagaa aacatacaaa aaatagcgat
    13261 tttgatatat ctaaaatcgg ctctttacct agagtggata taatctttag tcattcaaat
    13321 gacaatcctg attttgtcaa tgcttcgctt gaaaatggag caaagggtat aattaacgca
    13381 ggaatgggaa atggaaacat atacccatcc gctctagaag ctttagcaaa agccgtcaaa
    13441 gacggtgtaa ttgttgttag agatagtaga gtaggtagcg gagagactac gaatccgggt
    13501 gaaatagacg atgcaaaata tggattttta acaagtgata atttaaatgc tccaaaagct
    13561 agagtgcttt tgatggtagc tttaacaaag acaagcgatc ctaaaaagat tggggagtat
    13621 tttttaactc actaagcgat acagcccctt gatttggggc tttatttgat tttatttatt
    13681 taatagtttt tttactaaat cattttcttt tatattgttt ttagcggcaa attcttttac
    13741 gcttatatct tcaaatttaa gtccgttttt atttaggtat tcattaaata agctttcatt
    13801 cgtgccgaaa attttctctg cagtacttaa atttagattt gtaaagtttt gatatacgtc
    13861 tttaagcggc ggttttggat tatttggtgt agcagctata aaaactaccg acgccgcaaa
    13921 taaaactccc attatagcca gtttttttcc tgcgaagtac tttttgaacg gtgttaaatt
    13981 tgccattata tgcagcacac aagctatcac cattgccata cctatatact cgtgtaaaac
    14041 ttttataccg ctagatttta tatcaaaaaa cataagaact ccggttattc ctactactat
    14101 aaacgtaact atcgtagctg tcgtgccgat cggttttgat gctttcattt tttccctttt
    14161 tttataaatt tgatgaaatt attataaaat agtgttaaaa agttgtgaat ttatataagt
    14221 ttttgataca ataccacgca aaaattgagg taattttatg gattggattt tatttatcac
    14281 aagtttcttt ttggctgctt taagtcccgg cctaaatatg cttatggcgc ttactatcgg
    14341 gcttagcgca ggttataaaa gagcgttttt atttatcttg tcatctactg tttgtatagc
    14401 tgctatcgtg tttttaagcg gaattgggat aggatttttg ataactaaat ttccgttttt
    14461 ctttactgtt cttaggattt ttggtgcgtt ttatctattt tttatagctt ataagatgtt
    14521 tttagctact aaaataaata gcaatataaa gatagatgtt agaaatttaa gttcaaaagc
    14581 tatagttttt caaggattcg taagctcttt tggcgatcct attatatggg gatttatgat
    14641 aagcttattg cctaaattta tggatgttca taatcctttt aactctactt ttgctgcgtt
    14701 tatcatagtc atagcttgta tagagtttgc agctacaaat atctatgcta cttttggctc
    14761 aagcgtgaag aagtttttta gttcaagctt taaagtcata aataagatta gcgcaacgct
    14821 gtttttacta cttggagtct ggatgctttt tgacgtgttt aaatcttttt aggtgttatt
    14881 atggactggc tactttttat aactacattt tgggtgattt cactacttcc tgggctaaat
    14941 atgactttgg ctcttagtct tggtatgagc gttggatata aaaaaacgct ttttatgatg
    15001 gcaggagcga cgataagcct tggtatagtc gcttttgtat gcgctgtttc agtaggagcg
    15061 gtgttggcta aatttccgat attttttcaa atttttaccg ttatttgcgc ttcttatctt
    15121 ttgtatctga gctataaaat gtttctcgga agcaaattta accttgatga aaaagcaaaa
    15181 gatataagct ctaaagctct gttttggcaa ggctttatga gctcagtatc aaatccaaaa
    15241 gcgtgggcat tttttaccgc tttatttccg ctttttatag atagcgtttc gccctttggt
    15301 ataagactgt atatgatgat actcgtcttg atgtttatag aaatcataga ctttaatatc
    15361 tatgctcttg gcggagtcgc gttaaaaaac tgcttaaaac taaagcttat ctgatagaaa
    15421 gagtaagtgc ggttttgata gctatcatag cagttatgat gataattgag cgattttaag
    15481 tttaaatttg atataatcga ccaaattttt aaaggaaaag tatgtctaaa gtatggaaat
    15541 ttaaagataa tattgataca gatataataa tagccgcaag atacttaaat actagcaatc
    15601 cagatgaatt agccaaacat attatggaag atgcggataa agatttttat agcaaagtca
    15661 caaaaggcga tatcatagta gctggagaaa attttggttg cggaagtagc cgtgagcatg
    15721 ctcctctcgc tttaaaagct gctggtataa gtgtagttat agcgaggtct tttgcaagga
    15781 tattttatag gaatagcttt aatacgggac ttttgatatt agagtgtcaa aagactgatg
    15841 atataagtga aggagataat ctagaagttg attttagcgg tggaattata aaaaatttaa
    15901 ctcaaaaaac tgagtataaa tttgagccga ttccggaatt tatgcaagag cttgttagat
    15961 ctggcggtct tattaattat gctaaaaaaa gtctaaatta aatttaaaaa taaggtaaaa
    16021 catttatgaa tcgatataat atttgtgtta taaaaggtga tggaataggt ccagagatag
    16081 cagaagaggc tataaaagta ctcgatagtg ttagtgctaa gtttggattt gagttaaatt
    16141 acgaatattt tttgatgggc ggagcggcta tagatgtatt tggcgtaccg cttcctgatg
    16201 agactttgga gtctgcttta aaaagtgacg cggttctttt tggggctata ggtggatcaa
    16261 aatgggataa tttgccaaga gaccttcgtc cagaaagcgg tcttttaaag cttagaaaat
    16321 ctcttggagc gtacgcaaat ttgcgtccag cgcttatttt tgacgagctt ataaatgctt
    16381 ctactttaaa accagaagta ttacaaaacg tagatttgct tgtagttcgt gagcttactg
    16441 ggggacttta ttttggtgag ccaagacaaa aagatacaaa tagagctttt aataccatgg
    16501 tttatactac tcaagagata gaaagaatat ctaaaatcgc ttttgaagct gctatgaaaa
    16561 gagataaaaa agtctgttta gtagataaag ctaatgtttt agaaacgtct caactatgga
    16621 gagaagtagc ttctaaagta gcaaaagatt atcctgaagt gagtttggag tttatgtatg
    16681 ttgataacgc ttcaatgcag ttagttagaa atccagccca atttgatgtt attttgactg
    16741 agaatttatt cggcgatatt ttaagtgatg aagcaagtat gatatgcggc tctatcggtc
    16801 ttcttccaag cgcttctata ggcggaaaag taggaattta tgagccgata cacggaagtg
    16861 ctcctgatat tgcaggacaa ggaattgcca atcctatagc tatgatactt tctgcagcta
    16921 tgatgttgaa atatgcttta aataaaaacg aagccgcaaa cgatatagaa aaggccgtaa
    16981 gagctgtttt aagagatgga tatagaacaa aagatattgc taaatttgat gctaaagaaa
    17041 tttgtaccac aagtgaaatc ggctcaataa ttagtgatta cgtaaaaaag atatgaaaaa
    17101 tacaatcaca gaagctttaa tttatgaaaa tcaagggctt agaaatgacg cccttgaagt
    17161 ttataaaaac attttaaaag ctgagccgca caatcaagaa gctcagtcgg ccgtaagacg
    17221 tcttagcggt cttagacgca aaaatgttta tgtaaatgag cagatgcttg atttttttct
    17281 aaatttaaaa accgatgacg aaataggcat aagagaattt aaaaggtggc tagttaaaat
    17341 atgaaacttg aagatatcgc aaaaattact atagatgaag ttacagctga acttgaaaag
    17401 atacaaaaat tagatgaaat tcgcggcgat attgtaagcg ttgaggaatc tgttgcaaat
    17461 agagttgaaa acgatgataa gtcaactatt aagcctgagt ttaaggatga aagcgtaaat
    17521 agcgaaatta tttttctaaa aaatttaaaa gagagaatag gcgttttatt tgaaggctta
    17581 aatagttccg ataatagcaa tatggaattg aagcttgatt tgacaataaa atttttggaa
    17641 ttcgcacttg caaatatcga acatcgtctc acaaatcttt caaaataacg agttaagcac
    17701 tctaaaaaat atacttaaac accggactaa acgcgcttat cttgttggag gatgcgttag
    17761 agatatgctt cttggagcta aaaatattga ttttgatata gaagtttatg atatagatcc
    17821 tttcaaattt gaaaatatta tgcatgatat cggtgctact ggagttggaa aaagctattt
    17881 tgtatataaa tataaaaatt atgatataag cctacctaga actgaaagta agaacggaat
    17941 aggtcataaa gctttcatag tttcatactg taacgatgaa aaaattgcga gtaaaagacg
    18001 cgattttact atgaatgcta tgatgatcaa tatatttaat ggcgaaatac tcgacttttg
    18061 gggcggtcgt aaagatatac aaaacaagat tttgaaaata gttgataaac atagtttttg
    18121 cgaggatagt ttaagagttt taagagcagt gcagtttgct gcaagatttg gtttgaaagc
    18181 ggatgagcaa agcttaaaaa ttatgcgcaa tatcagtata gacgatctta gcaaagatag
    18241 aatcagatct gaacttgaaa agttttttat agctcctcat aaaacttttg gaatagaact
    18301 tttgagcgat ttggggctag ataaaagact ttttggagtt aaatttgaac cagatagttt
    18361 tggtaaaata gttcagcagc atttcaatat aacgcatgat tcaagaagtt ttttatatga
    18421 tcttataaac ttttataaat taaatccaaa agagatttta gatagtttgt ctctcggtaa
    18481 attctataaa aaattgataa acgagccgtt tttaaagcga gctagcagat atgaaatgat
    18541 gaaaatagca ttaagtatgc cgctttcaaa ttggcttggg ttaaatacga aaaatagggt
    18601 aagaatggca gttgatttag gattttatga taaaacattt aatccaaata tcgatataag
    18661 caagttatct catctaagag gcaaggactt aggagagcat ttaaaagtgt taaaagaact
    18721 cgaaattaaa gcttttttaa aggataaaag atgatctgca tagatcttgg ctcaaatact
    18781 atacgagttt gcgctatgga tgataatctt gagattaccc aaagttatga aaagatagtc
    18841 ggctcagcta gaaatttaag cagcgaaggt cttagtatgg cagcaaaaat gcgtattact
    18901 gaggctcttg gtgaaattat cgttacgttt gattttaaaa atgatagcca tatagcagtt
    18961 gccactgagg cttttaggct agcatcaaat gctaaagatt ttttttatga tattgaacgt
    19021 gattttggta ttaaatttaa tatcattagt ggaaatttgg aggctaaatt agcaagattg
    19081 ggtgtggaaa atagagcttt gaaacttgga tttcatatag atgaatcttt gctgatagat
    19141 cttggcggtg ctagcactga gataagtttt gcaaatgagt ttaagagttt taaatttgga
    19201 attgtaaggt tttgcgagga gtgctgtagc gatgaagcaa agtttaaaat agtcgctaaa
    19261 gataaaattc aagatgcttt gagctttatt tctaaattta attttaaaaa tattattctt
    19321 acgtctggag ttccaactag cgtggttgcc ttaaaacttg gactaaaata tgataattat
    19381 gacgctaaaa tgataaatgg agctatttta gatcttgagg attttgacgc agctctatta
    19441 aaactatctt tatcaaatga caaagatagt ttagtaggta aaaatagggc ttctttagta
    19501 atagccggaa tttatctttt aaaaccgata ttagaagaat ttagcgttcc atatatagtg
    19561 atagacgatg ggttaagaga aggaatcgca gtagccagta agcttggatt attaaattta
    19621 aaggagtaaa aatgagtgta aaagagcgta ttttaaatga tataaaagag gcgatgaaat
    19681 caaaagataa ttttcgtcgc gatactttaa gaatgattag ctcagctttt aaacagatcg
    19741 aagttgatga gagaattact cttagtgatg agagaatctt tgctatttta caaaccgaga
    19801 taaagcgtag aaatgagtct gcttctcagt ataaagcagg cggtagagag gatttagaac
    19861 aaaaagagct tgaagaggta aatatcataa gttcatattt gccaacgcaa ctaagcgact
    19921 gtgagcttga agaaaaacta caaaatttaa taagcaaaaa taattttgct agtattaaag
    19981 atctaggcgc acttatgaaa gttgcaaaag aagagcttgg cgctagttgc gacggcaaga
    20041 gaatgagtga ttgtgctaaa aaaatgctga caaaataatc attatttttt gttctgacta
    20101 ctatttgcta tcatttgatc tatgtttgag aaaatggtag cgcttttatc ctctattttt
    20161 ataaattaat ttataaattt gtctatattt tgcagattat atcctgattt cgactctgaa
    20221 acattttgct ttaccatatc tgttatggca tgtagttctt ctttggtttt aatgcaaaat
    20281 ttatcctttg tgaatctaga ttcaaaacta tttttgtaat tatttatgat atctgattct
    20341 tgatctgata gttcctgagt gcatcctagc tggtttaaag tgttgttata cgcagctgtt
    20401 ttatacataa cgatatcaag tttagttaga attcccatag ttttgttttg agttagttct
    20461 gcaatttgtg cggtattttg cgcatcaaaa ctaaatttgc ttaatgcgtc ttttagatct
    20521 tgcgtatttt ttgcagcagt ttgagctatt ttatttatca tatctgagtt cttatttaac
    20581 tcatctgctt cttgagagag taaatttacg tttaaatcga tatcgtttgt agcttttgta
    20641 gtattttcgg ctagttttct aacttcatct gcaacaaccg caaatccacg tccgtgctca
    20701 cctgcacgtg ctgcttctat ggctgcattt agagcaagaa gatttgtttg atctgcgata
    20761 tcttttatca gacttatgac attgcttatt tcattcgctc tttggtttat tgtttgtgtt
    20821 gtttgatttg agttttttgt tatattatca aaatttacgc aaagttcatt aacatttttt
    20881 atgctatctt gcgccaatgt tgccgttgtt tgcgatgagc ttactacttg atttagatct
    20941 tttacgcttt tttgaagatc ttttttgata tctgctatac ctttgtttcc gtttcctaac
    21001 tcacataatt tttgtgataa tatacctctg attttgcctt tttcaccttc caatacccca
    21061 gatacgccct cgctcattga tttagcattt actttaaata atcctttgaa tccttgagtg
    21121 tagatatttc tatattcaag tccgtttctt gaagctttta tgcttgtatc gatttctctt
    21181 tgtagcgctt ctatttgatc taaaagattg tttatacata ctgctatttg tgttagtttg
    21241 gaatttttat ctacatctgt aatcctagct tccagttttc cgtttgcagc ttgagtagcg
    21301 acatataaaa tttgctcata tagtttttca tcaaaactac tatttttgct aaatattgac
    21361 atttttatcc tttagaacgc tgtaaattat ttatgaaaca atcataagtg gtattgtttt
    21421 gagttagaaa actatttata aatttagaag aagcttctac gcctcctgtt ttttccaatt
    21481 caaccatttt ttgatatatc gggactatgg tttttatcgc ttctttgctt gctttgcgcc
    21541 ttactgagta gtagccgatt atatttccgt gttcatcaat ggatggtgta acatttgcgc
    21601 aaacccagta ataagcttga tcgaaagttc tatttttaac aaatgcaaag atttcttgtt
    21661 tgttttttat tcttttccat agcagttgaa agacaaattt aggcatatct ggatgtctta
    21721 ctatgttatg atgttttcct attagatctt tgttttttga atttactact tctaaaaaag
    21781 tttgattgca gtatgtaatg tcgcctttta agtctgtttt agagactaaa aacgcctctt
    21841 catctatatc cttttctaat agcccgaggc tgtctttcat atgattcctt tattataaat
    21901 ttaagtttat aatattatca tatgttatat taaagttata ttattatttt acagcattcg
    21961 ccatatccca catcggtaaa aatataccta gaccaaggag tattatggta gcagctataa
    22021 atacgagtag tatcggctca atatagcttg atatgttgtc aattagagta ttaaatttct
    22081 ctttatagta gtctgtaact ttctcaagca tagagtctaa actaccgctt ttttctccgg
    22141 cacttatcat ttgtaaaagc ataccttcat atagtttagt ttcgctaaat gcataattta
    22201 gtggatttcc tctttgtaca tttactttta cgcctaaaag tttattttta atatatgaat
    22261 ttgaaatcgt cacacaagcc gtatcaagag cgtcatttat aggtatacct gctcgaacaa
    22321 gttcagtaaa tatgagatta aatctactca tagatgaaaa aaatataata ttttttatta
    22381 gataaacttt taaaatatat ttatcaaata tatttttaaa ttttccattt ttcttatata
    22441 aattagttaa gataaataga aataaaacga tacctcctaa gcagataaat ccatagtttg
    22501 taataagata ttctatattt aggagtattc tagtaggcaa aggaagttct gcatttagct
    22561 gttcaaaaat atctctaaat gtcggaacta caagcaccat aagcagtaca aaagctattg
    22621 ctatagcgca aataactaaa gtagggtatc gaatggcttt tttaaatttt ctttgattat
    22681 cccaaatttc ttgtagtatt tcagctaatt tttgtagaga ttctgccata tttccggact
    22741 cttcaccaag tcttaccatt gctataacaa cattccctag ttcatcgcta tataaattta
    22801 aagactctgt gatgctcatt ccggcgttta aatcatcatt tacattttca aaaattagtt
    22861 ttagcctttt atccgttgtt gattttataa cctcttttat actatcgtgt attgatatac
    22921 cggcatttgt cataacgctt aactgtctta tacaagctac taaatttggt atttttacct
    22981 ttggatataa taatttttga gttagttttt gtttgatttc gcttatttgc atatcaagag
    23041 gtacagtttt ggtttctgtt acttttatta cgattcctct gttttgtttc atagcggttt
    23101 cttttgcttc tactctattt tcagctttta tatatatctt attgcgttta gcttttatta
    23161 tttgttctac ttcatatatc ttcatacttt tgctactcta tatatctctt ctatcgttgt
    23221 aattccgttt gccgctctta tgattccatc ataaaacata tccgtaaaac cctcttcata
    23281 tgcaactttt ttaagctcgt cttttgaagc ttcacttgct atcatagacg atattttatc
    23341 acttataggc aaaatttcgc ttatcatttc acgccctaaa aatcctgttt gagaacatag
    23401 ctcacatcct acgcttttat aaaattgata ctcgctagga agctgttttt gtatgtcttt
    23461 tatgatgttt gcagatagag ctattttttg tttacagtga ggacagagtt ttcttattag
    23521 acgttgagct tctatagcta tcaaagctcc gcttactaag tagctttcaa cgcccatgtc
    23581 tatcatacga gttatcgctg agattgcatc gtttgtgtgt agtgtagaaa atacaaggtg
    23641 accagttaat gctgcttgta tggcgattct taatgtatct tgatctctta tttctcctat
    23701 cattatgata tctggatctt gacgtaatat cgatcttaac gctacagaaa acgtaagacc
    23761 cgctttttcg tttacatgca cttgctggat catatttaat tggtattcta ctggatcttc
    23821 tacggtaata atcttttttt ctacgctttt tatatcgttt aaagcaccgt ataaagtagt
    23881 tgatttaccg cttccagtag gtcctgttac taaaattatg ccataaggtt gatgcatcga
    23941 gtgagtaaat ttagagaaat tttgttgacg catacctaaa ttttctaagc ttattaccac
    24001 tttggattta tcaagtattc ttaaaactaa actttctccg tttaaaatcg gcaaagtcga
    24061 tatacgaaaa tcatattctc tgtttaatat atgagcagaa aaacgcccgt cttgaggttt
    24121 tctacgttcg gctatatcca tatttgataa gagttttatg cggcttatta aaggtggata
    24181 tatatcttta tcaaatacaa aagtctcagc gagcattcca tcgatccggc ttcttacgat
    24241 acagtttgtt tctgtaggct ctatatggat atcgcttgct ctgttttgta tagatatcct
    24301 taagatcgtt tcaatgagct ttaaaatacc gctgctatcg ctatcttgtg tagtttggct
    24361 gccgagttct tttctgattt cgttgattat gccttttacg ctctcattta attctatttt
    24421 gctcatgtat ttatctatgt tatttggatc acatactact actttgagta attttctatt
    24481 aaaaatatga ccgattctat cttgagcgtc taaatcaaat ggatttttta gtgcaacata
    24541 tacatttatc tcatcttctt ttataggaag tgcaccgagc ttttttagct gtaccgcaga
    24601 tactttttca atgagattat aattgagttt gatgttttct aaatttaaat actccagcct
    24661 aaactgtttt gcaacatctt ttaagaactc ctctaaatct aataaaaaat ggtctgtaat
    24721 atcttttaga gttactctat cgcgcctata aagatctaaa atagtattta taaaatcatc
    24781 ataagatata tttgcatact ccatcaaaat atcttttatg ttgttggcgt ttatctttgt
    24841 ttctaaatca tttgcattgt tttgactgag ttttccatct ctgattagag tgagtaaaac
    24901 ttgtttatct atttgactta gttgggcgtt tttgttttga taaaactcag gtcctgaaat
    24961 atcatttttt tcattcatat ttttttacca ttataaagtt tcttttttga tctgctctat
    25021 aagctcttct atgctagctg atctattttt ctcttgtagt gcattaagaa ctgttagcgc
    25081 gtcttctttt ttgcctattt tatacttcgc tttagcaaag ataacccagc cttttacctc
    25141 gttttcatct atactattta tcgtaaaagc ccattttata gcattttcat agtcgttttg
    25201 tttgtaaaac tcttcagcta gtaaaatagc gtattttata tcattcgtac tatcaaattt
    25261 agattttaga gattctactg acatatctat ggtttgagat tcaattttta tgctgttttg
    25321 tgcttggttt ttattttgcg cctgattttg atattgattt gattcgctct gatttgtttc
    25381 tgaaaattcc aaaattttag tatcttgagg tagaggcaaa tcagaaatga tacgctgatt
    25441 tgtaatttca gaatcgttta aatttggtaa agcgttttga gagatgattt ttggtattaa
    25501 gacattgttg ttatctgcag tttttatatc ttttattttt tgctttgttt gctgatttgg
    25561 caacgattca tctagagtgg tttgtttttc gatatctaga ttaaagccta catccatctt
    25621 tttagcttgt tctagtagct ctttttcgtc ttgagctctt tgttgttcta gcttttgttt
    25681 agctattttt gctttttctt ttagttcatt tacgtgtttt tttaaattta tatttgctat
    25741 ttcattttga agcatatcgc tttgtttttt catatataga tctataaaat acccagcaga
    25801 tatactaatg cttaagcata taagtatcgt agcagataac atatatagtt ttttatttct
    25861 atttctgtta tattttttcc atttgttttc catttcttgt atttcataag aatcaagcat
    25921 ttataagtcc cgagtctatg gcagccattt ccactacttt ttttaataga cgtctatttt
    25981 ttatggttga tggtctgctt tcttcataat attcataaat ttcatatatt ttatataaca
    26041 gcttatttag tactcttaaa tttccattag ttaatttata tataagtttt atatgattta
    26101 tattgtacat atcaaaataa ctatggagat tatgaaaaac caactttttt tctatatata
    26161 agcatatttc atccagactc gagctttcta attcgatatt ttcccaaatt ctggtacgaa
    26221 aataatcctt agccagtgtg tcttcctcat ctgttttatg tacggtaaaa agtatcttaa
    26281 atag
//
LOCUS       DAPPKW010000014        24983 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.014, whole genome shotgun sequence.
ACCESSION   DAPPKW010000014 DAPPKW010000000
VERSION     DAPPKW010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 24983)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24983)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24983
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.014"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            144..1817
                     /locus_tag="RPW04_000560"
     CDS             144..1817
                     /locus_tag="RPW04_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDX6294678.1"
                     /translation="MDFLINLSEGWQFTIQLLIVLICLFYGAKKGGIALGLLGGIGLI
                     VLVFAFGIQPGKPAIAVMLTILAVVVASATLQASGGLDVMLQISEKVLRKNPKYISIL
                     APFVTSTLTILCGTGHVVYTMLPIVYDVAIKNGIRPERPMAASSIASQMGIIASPVSV
                     AVVTLTAFLISADHHLAGFDGYLDLLKITIPSTYLGVLCVGMFSWFRGKDLDKDLEFQ
                     GRIKDPEVKKYVYGDGTTLLGKKLPKTSWAAMWIFLGTIAVVATLGYFKDLRPAWNSN
                     KDGAVVQIVATYPTEQKILEKIVLKDAKAEVSGSSIDISGSKVKNVANNISGLTITQK
                     DGSKLMLSQNEQGSVIYTNVKGEVKEYPNSTISLSNKVASKTTLSMVDTIQIFMLLAG
                     ALILIFTPTNAGSIGKNEIFRSGMIALVAVFGISWMAETMFGVHTPMMKDMLGGVVTQ
                     YPWTYAIMLLLVSKFVNSQAAALVAFVPLALGIGVSPAIILAFAPACYGYYILPTYPS
                     DLAAIQFDRSGTTHIGKYVINHSFIIPGLIGVISSCIFGYIFAGLYGYL"
     gene            1915..2364
                     /locus_tag="RPW04_000561"
     CDS             1915..2364
                     /locus_tag="RPW04_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HDX6294679.1"
                     /translation="MKIASLFIGTTLLATTAFSADIDVYKTPECGCCSNWSKAMEKNG
                     FSTKEYKTNDIMNIKHNAGVPDELSSCHTALVGGYAIEGHVPAAEIKKLLSQKPDDVI
                     GISVPGMPIGSPGMEQDGIEETYKIIAFYKDGSQKVWATYKGSDEIK"
     gene            complement(2447..3622)
                     /locus_tag="RPW04_000562"
     CDS             complement(2447..3622)
                     /locus_tag="RPW04_000562"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294680.1"
                     /translation="MNLKVVIEQNLNNDNLENIIKKEIFKFAKDSFLGLSYEEKLERS
                     KSCFSEICSCLNEFELLNPKFVNAAVESLNRAIAYESEQYLYKIIYERDKLKKQIIDQ
                     KDRIRAITTLNCKNIENYICKTDFKNKDQISKVLNDRLLYDTQMLGILKETTESAFLT
                     TIEMGDDVEDTAYEIAKNIVYLAINEGDFTKERFINIARVVIKSAASIANESKIYAKE
                     LVKSAIIGSNDGISKAIEKFKDELKFAPDEIGDSLNYSAKELMKIEEDFIILLKDISL
                     SVNEPASIIVAEVLQSDYDSYFARLRRISAKTREQIMDKIDEISHKRFKLTGDLNIDE
                     RISNLKKEIGELEKKASQKLTQIKSLQTFENAKTEAKKLGDRVYEAAKNLIDSAKKK"
     gene            complement(3632..3895)
                     /locus_tag="RPW04_000563"
     CDS             complement(3632..3895)
                     /locus_tag="RPW04_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF493 domain-containing protein"
                     /protein_id="HDX6294681.1"
                     /translation="MANVCDFNEKPEIVYPIFWEYKIILDKDSDEKNLVKECVGNRNY
                     TLDFSKNSAEGKFKSFNLAVLVNSDEERLELFSLLKRYSKFVL"
     gene            complement(3888..4364)
                     /gene="moaC"
                     /locus_tag="RPW04_000564"
     CDS             complement(3888..4364)
                     /gene="moaC"
                     /locus_tag="RPW04_000564"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HDX6294682.1"
                     /translation="MLTHLNEQNLPKMVDVGLKDVTRRVAVASGAIKMSLEAYSAIKQ
                     NTGKKGPVLQTAVVAAVLGAKKTSDLIPMCHSLPINSININIEDLEELPGFKLEATVI
                     TDGKTGVEMEALTSVSVGLLTIYDMIKAIDKSMEIIFIRLDSKSGGKSGDYRRKNG"
     gene            4643..4730
                     /locus_tag="RPW04_000565"
     tRNA            4643..4730
                     /locus_tag="RPW04_000565"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4677..4679,aa:Ser,seq:gga)
     gene            complement(4775..5464)
                     /locus_tag="RPW04_000566"
     CDS             complement(4775..5464)
                     /locus_tag="RPW04_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDX6294683.1"
                     /translation="MIDENILKKLKNISVLLVEDDENTRFAITQSLQFYCKKIDVASD
                     GLEGFDKFFKDNFDIVVTDINLPNLNGLEMLDEIKKRAPHVASIIITSYDTSENILAS
                     IELGAYNYLRKPFKIEELQITILMATKNLYDNKISLKDDYEYDLASKTLYKDGDMISF
                     TKIESKLLYLLVSNIDKIVSYEMIENFVWGDKAMSSEALRMVIKKIRLKTTNDIIENI
                     SGVGYRVISKK"
     gene            complement(5454..7073)
                     /locus_tag="RPW04_000567"
                     /pseudo
     CDS             complement(5454..7073)
                     /locus_tag="RPW04_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731712.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
     gene            complement(7082..7654)
                     /locus_tag="RPW04_000568"
     CDS             complement(7082..7654)
                     /locus_tag="RPW04_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HDX6294684.1"
                     /translation="MKNIFIKICIFCIFAFVIFFGGNSLIHATSDDKFCTVCHEWMDP
                     MVEAYGQSIHGGANNHGFKASCTSCHLPNDSYVKYVFKKGLNGISEATHMVFNDAKEM
                     DWQGNRKNREEFVYDSGCISCHQTILDINSSNQNINDMHNLYAASIQNKDKKLSCVSC
                     HKTVGHKNLGKILYEIKHPPVGDWGDEIKR"
     gene            complement(7664..8056)
                     /locus_tag="RPW04_000569"
     CDS             complement(7664..8056)
                     /locus_tag="RPW04_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c3 family protein"
                     /protein_id="HDX6294685.1"
                     /translation="MLKIFKIFLTICIGLSISSFAANLDLNTFTKENYPIKAHHEKLG
                     FDCKNCHKEKNPNEYKALKTDECLSCHKSYKRLAERSGHLGYDDNIHSSPHYPNMDCN
                     NCHKSHKSSQNYCVMCHSQDGMKKILVP"
     gene            complement(8050..9603)
                     /locus_tag="RPW04_000570"
     CDS             complement(8050..9603)
                     /locus_tag="RPW04_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavocytochrome c"
                     /protein_id="HDX6294686.1"
                     /translation="MNSRRKFLGSLCALTSAAVLKANNFSDEQFKWDEEWDVLVVGSG
                     FAGTAAACQAIDEGVKTLLIDKMPVLGGNSAINGGAFAVVNSKFQKVRGIEDSYELYV
                     KDILKAGLGLNRMDLVEVIAKNGNDAYEYTLKKGVYYRDALGQFGGHSVPRTIWPEIN
                     SGGKITIPLQEYIMKSGGTIRTRVVLDDFIRNDNGKIIGVKVRENYDFIFDPLKNEDD
                     NKSGIVKFYKVNGGVVMATGGFAYDVNFRQTVDPKLTADLDCTNHYGATAYALKTMMR
                     NGADTVDLKWIQLGPWGSPDEKGFGIAPVFAIPAFSYGVMVDARTGKRFVNELADRKI
                     RSDAILKMHKNPDGSITHPVVICDSIGAQGTTKANVQRGIDKKVIRVFDTLKELADFY
                     KIPYEGLKKTVDDYTRYSKNGKDEEFDKPFFKFNDMIPDLTKPPFYAWQALPKVHHTM
                     GGVKIDTEARVIDKNGNIIEGLFSAGEAVGGPHGASRLGSCAIPDCLVFGRIAGKNAA
                     NLAKKEKKC"
     gene            complement(9613..10779)
                     /locus_tag="RPW04_000571"
     CDS             complement(9613..10779)
                     /locus_tag="RPW04_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Opr family porin"
                     /protein_id="HDX6294687.1"
                     /translation="MKKSTFLLISMIASMALANSDTLQSALKDGKFSGDISAFSETRH
                     INEGQKSVYYNNTSYIIGSVGLKYESDFYKNFKFVTGFRGTAPLYEKDKNYKTLHGTG
                     DSTERIYEDDRMMLSNLYLEYNAYDTSVKVGRQEMITDWVGKINDGVRVTNNSIENLT
                     LDAIWTRAQGRVYMKEMWGFKSINKDNGGLFNLGGTYKFDNGLGFKAYGLYADEVFSA
                     LGAKIIYDGQVSDELGVGGTIHYAQSDEDKNKDDGSVFEGLLYAKYLDTKLTLGYVKS
                     GKEIGWGSLNTAGDQIVQFEEGDVMYERDVKTFYAMLSTSIADFSVTGIFGTTEYKLK
                     GGDDTNYRQNEFSAWLSYPIMKNLQGLLIYDQVFKAQAGYPSLTQVGVGLIYSF"
     gene            complement(10792..12414)
                     /locus_tag="RPW04_000572"
     CDS             complement(10792..12414)
                     /locus_tag="RPW04_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009650705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid lyase"
                     /protein_id="HDX6294688.1"
                     /translation="MKSFVILSAVAALALSLSASSVTLDGNSVTSRDIVDIANGAKVG
                     IDQNAFSKVKKAHEILLNAAKDGQKIYGLTVGVGLNKDKNFVDAKGNLDPEVIKASTD
                     FNIGLIHAHCGGVGEDLPLQTVRAILATRLNNMLFAGAGVQEEVVHLYQEFLNQDILP
                     VMPSSGSMGEADITILGHIGLAMLGEGKVYYKGVKMDAGEALQKAGLKKLSPFGKDSL
                     SIVSSNAYSAALANLALEDFKQAFEVSKTVFALSLEALNGNVAPFLPEATSLRPYPSF
                     VSTAKEIREILKGSYLWEQNGERALQDPLSYRDATYLFAALKSSIDELEKLMKIQLNS
                     SDDNPGIYIGKSPKDASFQENKLFTSGGAVVPTSNFEPLLWVVEFEKASIVLAHNSKA
                     SSHRTIKLSDDNFTHLSRFLGTDKTIHAFGAMQKPFVSLAGENEFLANPASLDYSPVA
                     GNIEDVATNAPFVVQKFQKQIDNFYHILGMELIHAAQAIDLRKQKDPNLKLSKSTQKL
                     YDEYRKVVEFMNIDRPLSDDFKNSAKFLKNYK"
     gene            12942..13577
                     /locus_tag="RPW04_000573"
     CDS             12942..13577
                     /locus_tag="RPW04_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDX6294689.1"
                     /translation="MSKKHKFVICNPELCIGCKACMKACGKEAYKRGKLAKPRLDVIK
                     MTNGVMPNQCRQCDDAPCALVCPSSALRNENGYVEMHEQLCIGCALCVNACPYGAIHL
                     DSLEIPSNGSNLDEMDVCGDGFMSVAIKCDICDGRNEGSACVEVCPKGALVMLDPITN
                     KHKYGKKLKDGDNMSNFISKILDCPPPQIIIAQKNKPLKETGEVQQGEADA"
     gene            13570..15522
                     /locus_tag="RPW04_000574"
     CDS             13570..15522
                     /locus_tag="RPW04_000574"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012581.1,HMM:NF012868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294690.1"
                     /translation="MLEIIYTSFFLVGIICLVLYRVPKIALYIGLAIPCIISIFSTIY
                     FIKNINSTYGFKLAGNFLFSPHFIITPLSGFFSFIITFIAIGICIYTIGYIKEFKDRG
                     NLAVFAALFNFFILSMLLVVSSSDVFSFIVLWEIMTLISALLLKFNDEKHSNKTVMIY
                     LSIAQIGAFCILIALLFISYFAGSFSFIQWSKLDIDPTVATCILILLLIGFGSKIGMF
                     PFHVWAPLVYPLAPSNVAGMLSGIMSKMTIFGIIQFSVILPITSGFALSVVALGAISA
                     LIGITYALIQNDYIKLISYSSVENLGIIMLGVGVGFYGISIAEPTLVLLGFIGALFHV
                     LNHSTFKSLLFLGSGSIYSVTRTKNMNSLGGLARKMPFTALFFLIGAISISALPPLNG
                     FISEWFIYRSMFMGALDDSIASRLIFALAIICLALTGAMVVYAFIKLYGVIFAGTPKD
                     ENIHNRACEKSFFMPFGMFILAVSSIYFAVFANNIILFLGNVVLYLVPQTMYSMNINV
                     ISMPAIMILLIFALALPFLLFGLFGANMSKVRASEPWACGFKFSPQMSMNSNSFVGDF
                     KRLISKVIKFKTETKQQNYFSNVDYKTGTEDVWWKILYEPIIKFNMLIADKIGAFQNG
                     RSSFYVVYILVYLYAMLVVGFYFLGA"
     gene            15523..16443
                     /locus_tag="RPW04_000575"
     CDS             15523..16443
                     /locus_tag="RPW04_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HDX6294691.1"
                     /translation="MEAVLLMILQLFVALALTPLFDGIARNLRGKIQSRKGSPILQTY
                     YDIFKLLKRSRTAPNCVHWFFKFSPYMLFSVCAMLVMMIPITYGGSANTGAVSDIIVV
                     VYLVALFRFIFGVASLDSANPYAAVGASRESLIAIYIEPIMIICLVVIAMLAKTTNLA
                     IIKELIQNAEIGYSSASYAVASVAFLWAMYVETGRKPFDLAEAEQEVQEGVIGEYSGK
                     DLALVEMALMLKQFAMISFFIVMFVPIGFSSPFLTLIVHLILVGLFYVGAILMDNFGP
                     RFRIISSLKFNSACILFISLISLSLYVVGV"
     gene            16445..17080
                     /gene="hyfE"
                     /locus_tag="RPW04_000576"
     CDS             16445..17080
                     /gene="hyfE"
                     /locus_tag="RPW04_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002948677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 membrane subunit"
                     /protein_id="HDX6294692.1"
                     /translation="MEILIILMMILSLLVFGFRSYKLSIISYVLEAIALVCVFLFLAN
                     EYKANELFSWAIIAFFIKVIAVPLILFTLVKKLGVTHEVEPVGGFLVSPLIAFAFSIG
                     SAMLIAPIFMEFSLIKNETALIGGIFIFMVGIFGFILRNSFVKQILSYCLFENGIHLS
                     LALTAYNSHALVELGILSDAVFAIIIMSILAFAYYKIYGTLDTSIAASLKG"
     gene            17084..18559
                     /locus_tag="RPW04_000577"
     CDS             17084..18559
                     /locus_tag="RPW04_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit F"
                     /protein_id="HDX6294693.1"
                     /translation="MDILFLILLLPLVSALILFVSPLNVKVLNLLHILCSAAVSLALL
                     CSISKVLSLGAIYAFNDMLFLDSLGAVFLVLISLTGFCVNLYSTSYFKWQLNSNSLNL
                     KQIKTNFCLSHITTFAMTLSCISNNMAIMWAALEATTLATVFMVALKGDKRSLESGYK
                     YIIICSVGLAFAMFATILLYASSLNTLHDEKNAILFSNLILHASSLNPDVLKLIFIFA
                     LIGFGTKAGLVPTHTWLPDAHAQGPAPTSAMLSGIVIKCAMLGLLRYYAIASNATGGN
                     FSEQIMLISGTLTLFVSAFFLIRQHDVKRMFAYHSVAHMGVIAFALGVGGKIGVFAAV
                     FHCAAHSFTKALAFLTTGNTARIYGTNDMSKMGCMIHIAPLTTVLFGISICSLVGVPG
                     FAIFVSEFLTFKAAVLSGQYAAIVLFALALTIIFIADFSHFFMASFGEVKGEVKFKSE
                     MSLWENLPLIALAFLIISFGIWQFDNFWILVQNSVTMIKGN"
     gene            18559..20307
                     /locus_tag="RPW04_000578"
     CDS             18559..20307
                     /locus_tag="RPW04_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase large subunit"
                     /protein_id="HDX6294694.1"
                     /translation="MRGDKFIDILKNEFNILETSRQCEDQITILVDRNDLPKVVHKLY
                     YSIGGWLSSMVANDERTINQSYALYYVLSMEGSKMSKEDGTIDEIQSSEKCFITVKTL
                     IPQNDPCYPSVTPLVPACVWYEREAYDMFGLVAEGLPDKRRLVLSDDWPENLYPLRKD
                     AMDYKFRPDPVQPKDEPDYEFMRPNGSVTDIPLGPLHITADEPGHFRLYCDGDTIVDA
                     DYRLFYQHRGMEKLAENRLNYNQMSYLAERVCGICGFAHSIACVEAVERGIGLEIPRR
                     AQAIRIMSSEIERMHSNLLNLGLACEVTGNYTAFMHIFRVREYTLELAQLITGGRKTY
                     GTIVIGGVRRDITLNEIKQSYEILEKIGTQLDEIWQVVMEDKRQIGRWKGIGILDKQV
                     ARDFSPVGPNVRGSGFKRDTRYDHTYGFYKELELTPNVQFDGDVLSRELVRYNDCKQA
                     LRLVKQCLDIMPGGAIFTDTNYRLQPGTYCLGYDEAPRGENIHWIMQGDSQKVYRWRC
                     RASTYNNWSSLRYQLQGNTIADAALIVCSLDPCYSCTERVTLVNVKSGKSKVIGEKEL
                     KKYCQSLKDSPTKDIR"
     gene            20304..20834
                     /locus_tag="RPW04_000579"
     CDS             20304..20834
                     /locus_tag="RPW04_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDX6294695.1"
                     /translation="MKIYDIVKKTGIVTSKYPYEPYIVEEHFRGKPTYHYTNCIGCAA
                     CGVACPSNAISVKWEDGKKFIKWRYNCGRCIFCGRCDEVCPTAAIRLSNDYELTVKFD
                     KSALIQEGELESELCSVCGKAFLSKKFVQFCEQRLSTLSKQRLEEAKKYLHICPSCKK
                     NAIVEMMTNKEYKAVK"
     gene            20834..21649
                     /locus_tag="RPW04_000580"
     CDS             20834..21649
                     /locus_tag="RPW04_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HDX6294696.1"
                     /translation="MYVVPDDIQRSNDLNSKLNLLKNIKRSFSVFRIDCGSCNGCEIE
                     IFAALSPLWDPERFGFKLVANPRHADILIVSGPITRQMYYPLLRAYEATPDPKIVVGF
                     GACGVSGGIFHDSYAVWGGADKILPVDVFVPGCPPHPASIIYALATAVGLIEQKLEKQ
                     SFKDDDLLPNLTQKSLLDNASFERDLLVKAKFLMSYIYGRILYDKFITALKTCVNPKD
                     PILAKDALSLAIKEQDDQRYAECLAVLFNEIYLKYTNASNEFHINLDQIWDKK"
     gene            21646..21987
                     /locus_tag="RPW04_000581"
     CDS             21646..21987
                     /locus_tag="RPW04_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294697.1"
                     /translation="MIQVWKLTKRHVDENAELPQIYKQIVTFSTCVGHGVGTIDFNEK
                     IAEFDDEQWNKMLDSSDEYVKFKLGNVNKYFEVEILPVHAKVLKDKLPNSKFRDILSS
                     LDEGYIVLKKS"
     gene            21990..22454
                     /locus_tag="RPW04_000582"
     CDS             21990..22454
                     /locus_tag="RPW04_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 3 maturation endopeptidase HyCI"
                     /protein_id="HDX6294698.1"
                     /translation="MPKTKKELKKSLLCIGNKMRGDDAVGLYVGELVEEQMPSWRVFY
                     GQDVPENEFGAIREFAPDIIVVVDAMSGFKDDKIEFFNLENERDYIYSTHNLPTPVLL
                     SYLRTITPKTLFLGISVLLENVLGFEEGLSQNAKISAKKAVQKIKEIDLNLK"
     gene            complement(22561..22773)
                     /locus_tag="RPW04_000583"
     CDS             complement(22561..22773)
                     /locus_tag="RPW04_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDX6294699.1"
                     /translation="MPGVKVHPNESFDEAYRRFKKQTDRNLVVTEVRARRFFEPMTEI
                     RKKQKISARKKMLKRLYMLRRYESRL"
     gene            22931..24334
                     /gene="ccoG"
                     /locus_tag="RPW04_000584"
     CDS             22931..24334
                     /gene="ccoG"
                     /locus_tag="RPW04_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HDX6294700.1"
                     /translation="MSANIKQYLANWTPYATKRYIAYAVVTIIALVLPFIRINDNHFF
                     LLSFDKKQLHLLFTSFDMQELYLMPFVLIILFLTIFFLTTLGGRIWCGWACPQTCFRV
                     IYRDLIQTKILKIRKNIRDKQKKLMASILKKMIAVFIWTCLSLVAASNFLWYFVPPED
                     FFSYLANPAQHKLLIGILIGITLFIVYDVIILAENFCIYVCPYARVQSVMFDNDTVQV
                     IYDEKRGGKIYECHTKIGKKPLEKDAKCIGCDACVHICPTHIDIRQGMQLECINCLEC
                     SDACTKVMAGFGEKSLINWTSAKSLQTGKKVNYFRFRTIAYMVVLSIAIIALIFMSTK
                     KEHMLLNINRTTELYKIKVEDSKFEVQNAYTFLIQNTQNKVHEYYFDVNDTRISINRP
                     LEPIKLKAGGKRKIIVVLSTKDTLVDEVNKDTPIDITINAYAVDDINTVKVSRDTIFV
                     FPKMTEINKAIQKQENE"
     gene            24327..24968
                     /locus_tag="RPW04_000585"
     CDS             24327..24968
                     /locus_tag="RPW04_000585"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012655.1,HMM:NF025605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDX6294701.1"
                     /translation="MSNEILSQIKSKKAKDRYELILSVSLELFLKNGFENTSLNDIIS
                     KSGGSLSTIYTYFGSKEGLFKAIIDRGVRQFLTEVENQIYLDSSDDLEKFLFKFGEEF
                     LNVVWTKDSLLLKKLILNESFKDKSQIVDIFYESGVKKVNQILTDFFSKPSVKPRFKS
                     DDLELLAFRFCYLLEEPFTVRSAILKRHLNMNKQEKKEWVKECVEFFLSAALK"
BASE COUNT         7800 a         4424 c         4326 g         8433 t
ORIGIN      
        1 atttagctga ttatagcaca ttttttacaa atttattttt tataaatatt aataattaat
       61 atgtatttgc agagcattta agtagaattt aaaattaata ggaatacaat tattactaat
      121 actttttaaa taagggagaa acgatggatt ttctaataaa tctaagtgaa ggttggcaat
      181 ttacaattca acttttaatt gtgcttattt gtctatttta cggtgcgaaa aaaggcggta
      241 tagctttagg acttcttggc ggtataggcc ttatagttct agttttcgca tttggtatac
      301 aaccggggaa acctgcaatt gcagttatgc taacaatact cgcagtagtt gtagcaagcg
      361 ctactttaca agcaagcggc ggacttgatg tgatgctgca aatatcagaa aaagtactgc
      421 gtaaaaatcc aaaatacata agtattttgg ctccgttcgt aacttctact cttacgatac
      481 tttgcggaac gggacacgtt gtttatacaa tgcttcctat cgtttatgat gtggccatca
      541 aaaatggaat tcgtccagaa cgtcctatgg ctgctagttc gatcgcttct caaatgggta
      601 tcattgcgag tccggtttct gttgcggttg tgactttaac agcgtttctt ataagcgcag
      661 atcatcatct agctggattt gacggttatt tagatcttct taaaataaca attccttcaa
      721 catatcttgg tgttttatgc gttggaatgt tttcttggtt taggggaaaa gatctcgata
      781 aagaccttga atttcaagga agaattaaag atcctgaagt aaagaaatac gtgtatggag
      841 acggcacgac tcttcttggt aaaaaacttc caaaaaccag ctgggccgct atgtggatat
      901 ttttaggaac tatagccgta gttgctacac ttggatattt caaagaccta agaccggctt
      961 ggaattcaaa taaagacggt gcagtagttc aaatcgtagc tacatatccg acagagcaaa
     1021 agatcttaga aaaaatcgtt ttaaaagatg caaaagctga ggtttctggc tctagcatag
     1081 atatttcagg tagtaaagtt aaaaatgttg caaacaatat ctcaggacta actatcacac
     1141 aaaaagacgg ttcaaaacta atgctttctc aaaatgagca aggtagcgtt atttatacaa
     1201 acgtaaaagg cgaagtaaaa gagtatccaa actcaactat ttctttatca aataaagtag
     1261 cgagcaaaac tacgctaagc atggttgata ctattcaaat ttttatgctt ttagcaggag
     1321 ctcttatctt aatctttact cctacaaacg cgggaagcat aggtaaaaac gagattttcc
     1381 gctcaggtat gatagccttg gttgccgtat ttggtatatc atggatggct gagactatgt
     1441 ttggagtgca tactcctatg atgaaagata tgcttggtgg agttgttact caatatcctt
     1501 ggacatacgc cataatgcta cttttggtat ctaaatttgt taattctcaa gctgcagctt
     1561 tagttgcatt tgttcctctt gctttaggaa taggcgttag cccagctata attttagctt
     1621 ttgctcccgc ttgttatggt tattatattt tacctacata tccaagtgac cttgcggcga
     1681 tacaatttga ccgctcagga accacacata taggcaaata cgttataaat cacagcttta
     1741 ttattccggg gcttatcgga gttataagct cttgtatatt tggatatata tttgctggac
     1801 tttatggcta tctataatat ataatgattt gggctttgac ccaaatcact tttaattaat
     1861 tctacattta atctaatatt ttacaatttc ataacttacc tataaaggat ttttatgaaa
     1921 attgcttctt tgtttatcgg cactacgcta cttgctacta ctgcgtttag cgcagatata
     1981 gacgtttata aaactccgga gtgcggttgc tgcagtaact ggtcaaaagc tatggagaaa
     2041 aatggattta gtactaaaga gtacaaaaca aacgatataa tgaatataaa gcataatgct
     2101 ggagttccag atgaattatc tagctgccat acggctttgg tcggcggata tgctatagag
     2161 ggtcatgttc cagcagccga gataaaaaaa ttattatctc aaaaaccaga cgacgtcatt
     2221 ggtataagtg ttcctggaat gcctatcgga agtcctggta tggaacaaga tggtatagaa
     2281 gaaacttata aaataattgc attttataaa gacggaagtc aaaaagtctg ggcaacatat
     2341 aaaggttctg atgagataaa atagtctaaa tttggaacaa aacaactata aaagcagttt
     2401 tttactgcct ttatagttaa atttatctaa atttgactct gatattctac tttttctttg
     2461 ccgaatctat cagatttttt gcggcttcat aaactctatc tccaagtttt tttgcttctg
     2521 tttttgcatt ttcaaatgtt tgaagacttt ttatctgagt taatttttga ctggcttttt
     2581 tctctaactc gccaatctct ttttttaaat ttgaaatcct ctcatctatg tttaaatcac
     2641 ccgttaattt aaatctttta tggctaatct catctatctt atccattatc tgttctcttg
     2701 ttttagctga aattcttctt agtctagcaa aatacgaatc atagtcgctt tgcaaaactt
     2761 ctgctactat gatggaagcc ggttcattca cgcttaaaga tatatctttt aatagaatta
     2821 taaaatcttc ttctattttc ataagctctt ttgcactata atttaaacta tctcctatct
     2881 cgtccggagc aaatttaagc tcgtctttaa acttttcaat agcttttgaa atgccgtcgt
     2941 tgctgccaat tatcgcgctt ttaacaagct cttttgcata aattttactc tcatttgcaa
     3001 tgctagcggc actttttatc acgactcttg cgatatttat aaatctttct tttgtaaaat
     3061 ccccctcatt tatagccaaa taaactatat ttttagcgat ttcatacgca gtgtcttcaa
     3121 catcatcgcc catctctata gtagtcaaaa aagcagattc ggtagtctct tttaagatac
     3181 cgagcatctg agtgtcataa agcaatctat cgttcaaaac ttttgaaatt tgatctttgt
     3241 ttttaaaatc cgttttacat atataatttt ctatgttttt acaatttagc gtcgtaatag
     3301 ctcttatccg atctttttga tctataattt gcttttttaa tttatctctt tcatatatta
     3361 tcttgtatag atactgctca gattcgtaag caattgccct atttagagat tctacggctg
     3421 catttacgaa tttaggattt aaaagttcaa actcattcaa acaagaacaa atctcactaa
     3481 agcaagattt agaacgttct aatttctcct cataactaag tcccaaaaaa ctatcttttg
     3541 caaatttaaa tatctctttt ttgataatgt tttcaagatt atcgttattt aaattttgct
     3601 ctattaccac ttttaaattc atagtatctc cttataaaac gaactttgaa tatcttttaa
     3661 gcaggctaaa aagctccaat ctttcttcat cgctatttac taaaacagca agattaaaac
     3721 ttttaaattt gccctctgcg ctatttttag aaaaatcaag cgtataattt ctgtttccaa
     3781 cacactcttt taccaaattt ttttcatcag agtctttatc taaaataatt ttatactccc
     3841 aaaaaatcgg ataaactatc tctggttttt cattaaaatc acatacatta gccatttttt
     3901 ctcctataat ctccactttt cccgccgctt ttgctatcta atcttataaa gattatttcc
     3961 atagatttat cgatagcttt tatcatatca taaatagtaa gaagtccaac gctaacactg
     4021 gttaatgctt ccatttctac tccagttttt ccatctgtaa tcactgtagc ttcgagctta
     4081 aaccctggaa gctcttccaa atcttctata tttatattaa tagagtttat aggcaaagag
     4141 tggcacatag gaattaaatc gctggttttt ttagctccta aaacagctgc tactactgct
     4201 gtttgaagta ccggaccttt tttacccgta ttttgtttaa tggcgctgta cgcctctaaa
     4261 gacattttta tcgctccact agcaacagct actcgcctag taacatcttt aagaccgaca
     4321 tcaaccatct ttggaagatt ttgctcattt aaatgcgtca gcataaaagt ctcctttttt
     4381 aagacgatta tagcgaaaac ttaataaaaa ctattttagc ggatagaata gttataaaat
     4441 ttgaaacaat atggcaataa attaatgttt taaattataa tcttaacgtt acattaattt
     4501 aatattgaaa attcaagaat ataatgtcaa ctcctaaaca aataacctcc tttttgtaaa
     4561 gcgctcactg aaaagtgggc ggtttctttc agagttctat tttaaattta agctaaatta
     4621 ctatataatc ataagattcg atggatagat gtccgagcgg ctgaaggagc atgcctggaa
     4681 cgcgtgtaaa gtgtaagctt tcgagggttc aaatccctct ctgtccgcca taaaattcct
     4741 aaaaccaatc aaatttataa caccgagttt aaatttactt ctttgatatg actctatatc
     4801 cgacacccga aatattttcg atgatatcgt ttgtggtttt taatcttatc tttttgatta
     4861 ccatacgcaa ggcttcgcta ctcatcgcct tatcgcccca tacgaaattt tcgatcatct
     4921 cgtaacttac tattttatcg atattgctta caagcagata cagaagtttt gattctattt
     4981 ttgtaaatga gatcatatcg ccgtctttgt agagcgtttt tgaagctagg tcatattcat
     5041 agtcgtcttt taaggatatt ttattgtcgt ataaattttt tgtagccatt aaaatagtta
     5101 tttgaagctc ttcgatttta aaaggttttc taagataatt gtacgcccca agctcgatac
     5161 ttgcaagtat attttcgctt gtatcgtacg atgtgattat gatagatgct acatgcgggg
     5221 ctcttttttt aatctcatct agcatctcaa gaccgtttaa attcggtaaa tttatatcag
     5281 taactacgat atcaaaatta tctttaaaaa atttgtcaaa tccttcaagc ccgtcgcttg
     5341 cgacgtctat ttttttgcaa taaaactgca aggattgagt tatggcaaat cttgtatttt
     5401 catcatcttc aacaagcaaa accgatatat tttttagttt tttaagtata ttttcatcta
     5461 tcatctttta ccttttttag tatagttagc gtaacaatag tcggattttg atatctgctt
     5521 acatatagat ctccgccgca ttttttattt gctatcaatt ttgatatata caaaccaagt
     5581 ccggagctgc ctttcgtact cataaaagga gtgaaaagat cgtctttgaa attttgagct
     5641 attccatcac cgttgtcgat aactctgata acaaaatgag tttgagtttg ttttatatta
     5701 actactattc tggttctttt tttgttttta ctattttgta aaatttgttt tgaattttgg
     5761 atcaaacaag cagttatctg tttaaattca tttatataat ttttacacat cggcgtaacg
     5821 ccttttgcta tggtaacttt gatatctatc gttgatttta ccggaaaaag aacacatacc
     5881 gtatcgttta tcgctttttg tatatcaaat tcttgaacgt ttttttcaat cttataaaag
     5941 ttcttaaaca tatccatagt ttttgacata taatctatat tttgtaaaga tctagtgata
     6001 ttgtcataaa aaatttcatc gcttagttta ttcatttttt taaactgcat caaatttcca
     6061 aggaaaattc cgagtgaatt taaaggctgt atccactgat gagaaagcgc cgctatcatc
     6121 tgaccgagct ccgccatttt agtttgttgg aacaaaagaa cttcgtaatc tctttttgct
     6181 ttttcaaata tttttgattg tcgctctaac cttttgttgt aaaagtaagc caatatcaaa
     6241 aataaaataa tactgataac atatatcata agatttatta taaattgctc gtttattttg
     6301 ttatatatat tatcttttag cgtttttgta accaagatca attttgagtt ttcaagcggt
     6361 ttgaaattta gaatttcatt ttacgtttca tggcttaacg atttgataaa atttaaattt
     6421 tctatattaa attttgtttg ggaaaatcct gtttcgctat ctggatgaag taagatgtta
     6481 agatcttcgt ctattaaaaa tatatatccg ttttctagtc tcaaatttaa aatttcattt
     6541 tttatactct cgaaagatat cacgccgcaa ataacgcctt gtagtttatt ttctcgtttt
     6601 atactttgac aaatcgatat aactggaatt ttaagtccgg catcaagata tggcttggtg
     6661 atgtaaattc cgttttgtaa aacagtgttt atataccaag gtctttgcgt cggcgcgtaa
     6721 ttttttggac cttgaaatac tctgctagaa agcatcgtgt cgttttcata tccgacgtac
     6781 gtacttgaaa aatttgctat ttcctgagat ttaataagta tatcttgtat agtattttgc
     6841 tctttcgtat ggtcgaaatt tgcgacaagc aaactaatga atttgagact agttttttta
     6901 ttttcaagcc attcttgtat cttgtcgctt gaatttttta aaatactaag ctgctcattt
     6961 gtgagaactt ctttcacaaa tgagcgattt aggtaataat ttcctatcat aagcaataag
     7021 aaaaatatag aaaatattat aaagatatta tttttgtata atatctcttt cataaggctc
     7081 cttatctttt tatttcatct ccccagtctc cgacaggcgg atgtttgatc tcatacagta
     7141 ttttacccaa atttttatga cctacggttt tatgacagct tacgcaactt agttttttat
     7201 ctttattttg aatagacgcc gcgtatagat tatgcatatc attgatattt tgattgcttg
     7261 agtttatatc taaaattgtt tgatggcaac ttatacaacc gctatcatat acgaattcct
     7321 cgcgattttt tctattgcct tgccaatcca tctcttttgc atcgttaaaa accatatgag
     7381 tagcttcgct gatgccgttt aagccttttt tgaaaacgta ttttacataa ctatcattag
     7441 gcaaatggca actagtgcaa cttgccttaa atccgtgatt attcgcacct ccgtgaatgc
     7501 tttgcccata agcttctacc ataggatcca tccattcgtg acaaacggta caaaatttat
     7561 cgtcgcttgt agcgtgtatc aaagagttac cgccaaaaaa tatgacgaat gcaaaaatac
     7621 aaaatatgca aatttttata aaaatatttt tcatcatatc tccttatggc accaatattt
     7681 ttttcatacc atcttgcgaa tggcacatta cacaataatt ttgtgaagac ttgtgtgatt
     7741 tatgacagtt attgcaatcc atattaggat aatgcggact gctatgtatg ttatcatcat
     7801 atccaaggtg accgcttctc tctgctaaac gtttgtagct tttatggcag ctcaaacact
     7861 catctgtttt tagagcttta tattcgtttg gatttttttc tttgtgacaa tttttgcagt
     7921 caaatccaag tttctcgtga tgagccttta taggataatt ttctttcgta aatgtattaa
     7981 gatctaaatt tgcggcaaaa gagcttatag atagtccgat acatatagtt aaaaatatct
     8041 tgaaaatttt taacattttt tctccttttt tgctagatta gcagcgtttt tgccggctat
     8101 ccttccaaaa actaaacaat caggtatagc acaacttccg agcctgctag ctccatgcgg
     8161 tccgccgact gcttctccgg cagaaaaaag cccttcgatt atatttccgt ttttgtctat
     8221 aactctagct tcggtgtcta ttttcactcc gcccatcgta tgatgaactt ttggcaaggc
     8281 ttgccatgcg taaaaaggcg gttttgtgag atccgggatc atatcgttaa atttaaaaaa
     8341 cggtttgtca aactcttcgt cttttccgtt ttttgaatac ctcgtataat catcaacggt
     8401 ttttttaagc ccttcgtaag gaattttata aaaatctgct aattctttaa gcgtatcaaa
     8461 aactcttatg acttttttat ctattcctct ttgtacgttt gcttttgtag tgccttgtgc
     8521 gccgatgcta tcacatataa caactggatg agttatgctt ccgtctggat ttttatgcat
     8581 ttttaaaatg gcatctgagc gaatttttct atctgcaagc tcattgacaa atctttttcc
     8641 tgttcttgca tcgaccatta cgccataact aaaagcaggt atcgcaaaaa caggagctat
     8701 accaaatcct ttttcatcag gactccccca aggtcctagt tgtatccatt ttagatcaac
     8761 cgtatcagcg ccgtttctca tcatagtttt tagagcgtac gccgttgcac catagtgatt
     8821 cgtacagtct agatccgcag ttaatttcgg atcgaccgtt tgtctgaaat ttacatcata
     8881 agcgaaaccg cccgttgcca taacgactcc gccatttacc ttgtaaaatt tcacgatacc
     8941 gcttttatta tcatcttcgt tttttaaagg atcaaatata aagtcgtaat tttccctaac
     9001 ttttactcca atgatttttc cgttatcatt tcttataaaa tcatctaata caaccctagt
     9061 cctgatcgtt ccaccgcttt tcataatgta ttcttgcaaa ggtatcgtga tcttgccgcc
     9121 cgagtttatt tctggccaaa tcgttcttgg aacagaatgt ccgccgaact gacctagcgc
     9181 gtctctgtaa tacacgcctt tttttaacgt atattcataa gcgtcatttc cgtttttagc
     9241 tataacttcc actagatcca ttctatttaa cccaagtccg gcttttaaaa tatcttttac
     9301 gtaaagctca taagaatcct ctatgccgcg aaccttttga aattttgaat ttacgaccgc
     9361 aaacgctccg ccgtttatag ctgaatttcc tccaagaacg ggcattttat ctatcagcaa
     9421 tgtttttacg ccctcatcga ttgcttgaca agcagcagcc gtaccggcaa atcccgatcc
     9481 gactaccaaa acatcccatt cttcgtccca cttaaactgc tcatcgctaa agttattagc
     9541 ttttaaaaca gcggccgatg taagagcgca taagctacct aaaaattttc ttctactatt
     9601 catttaatct ccttaaaaac tataaatcag cccgacgccg acttgagtca aactaggata
     9661 tcccgcttga gctttaaata cttgatcata tatcaaaagt ccttgtaaat ttttcattat
     9721 aggataacta agccatgcgc taaattcatt ttgtctataa ttcgtatcat cgccgccctt
     9781 aagtttatac tccgtcgtac caaatatacc agttaccgaa aaatctgcta tgcttgttga
     9841 taacatcgca taaaacgtct taacgtctct ttcgtacatt acatcgcctt cttcaaattg
     9901 aacgatttga tctccagccg tatttaaact cccccagccg atctctttac ctgatttcac
     9961 atatcctaaa gtaagttttg tatctaagta tttagcatag agtaatcctt caaaaacgct
    10021 accatcgtct ttgtttttat cttcgtcgct ttgggcgtag tgaatggtac caccgacacc
    10081 aagctcatcg cttacttgtc catcatagat tatctttgcg ccaagagctg aaaatacctc
    10141 atccgcgtac aaaccgtacg ctttaaatcc aagcccgtta tcaaatttat aagttccgcc
    10201 gaggttaaaa agtccgccgt tatctttatt tatactttta aagccccaca tctctttcat
    10261 ataaactcta ccttgagcgc gtgtccaaat agcgtccaaa gtcaaatttt cgatagagtt
    10321 atttgtcact ctaactccgt catttatctt accgacccag tcagttatca tctcttgacg
    10381 acctacttta acggacgtat catacgcgtt gtattctaaa tacaaatttg ataacatcat
    10441 cctatcgtct tcgtaaattc tctctgtgga atctccggta ccgtgtaatg ttttataatt
    10501 tttatctttt tcgtatagag gagccgtacc tctaaagcct gttacgaatt tgaaattttt
    10561 ataaaaatca ctttcgtatt ttaagccaac agaacctatg atatacgatg tattattata
    10621 ataaacgctt ttttgacctt catttatatg acgagtttct gaaaaagcgg agatatctcc
    10681 gctaaattta ccgtctttaa gcgcactttg caacgtatcg ctattagcca aagccatact
    10741 agcgatcatt gaaataagca aaaatgtact ttttttcata gcgataccct tttatttata
    10801 atttttcaaa aatttcgccg aatttttgaa atcatcgctt aaaggtctat ctatattcat
    10861 aaactcaaca acttttctat actcgtcata taatttttgc gtagattttg ataattttaa
    10921 atttggatct ttttgttttc ttagatcgat agcttgggct gcgtggatga gttccatacc
    10981 taaaatatga taaaagttat ctatctgttt ttggaacttt tgaactacaa acggtgcatt
    11041 tgtcgcaaca tcttctatat ttcctgctac gggagagtaa tcaagcgaag caggatttgc
    11101 tagaaattca ttttcaccag ctaatgacac aaaaggtttt tgcatagctc caaaagcatg
    11161 gatagtttta tcggtgccta aaaatctgct aagatgggtg aaattatcgt ctgataattt
    11221 tatagttcta tgcgatgaag cttttgagtt atgagctaaa actatagatg ctttttcaaa
    11281 ctcaactacc caaagtaacg gctcgaaatt tgatgtagga acaactgcgc cgccgcttgt
    11341 aaatagttta ttttcttgaa aactagcatc ttttggactt tttcctatgt aaattcccgg
    11401 attatcgtct gaagaattta gctgaatttt cattagtttt tctaattcgt caatactgct
    11461 tttaagtgcg gcaaacaaat acgtagcgtc tctataacta agcggatctt gcaaagctct
    11521 ctcaccgttt tgttcccaca aatagctacc ttttaagatc tcccttatct cttttgcagt
    11581 tgaaacaaag cttggataag gtcttaaact agtagcttct ggtaaaaatg gagcaacatt
    11641 accgtttaaa gcctctaaac tgagtgcaaa tactgttttt gaaacttcaa atgcttgctt
    11701 aaaatcttca agcgcaagat ttgcaagcgc tgctgagtaa gcgtttgaac ttactataga
    11761 tagactatct ttaccaaaag gtgatagttt tttaagccct gctttttgca aagcctcacc
    11821 agcgtccatt tttacacctt tataatagac cttgccctct cccaacatcg caagaccgat
    11881 gtgtccgagt atagtgatat cggcttctcc cattgaacca ctacttggca taacaggaag
    11941 tatgtcttga tttaaaaact cctgataaag atgcacgacc tcttcttgaa caccagctcc
    12001 ggcaaaaagc atattattaa gtctagttgc aaggatcgct cttaccgttt gaagcggtag
    12061 atcttcgccg acaccgccgc aatgagcgtg tataagacct atattaaaat ccgttgatgc
    12121 tttgatgact tctggatcta aatttccctt tgcatcaacg aaatttttat ctttattaag
    12181 accgacgccg actgttagtc cataaatttt ttggccatct tttgccgcgt taagcaaaat
    12241 ttcgtgtgct ttttttactt ttgaaaaagc attttgatca atgcctacct ttgccccgtt
    12301 tgctatatct actatatcgc gagacgttac gctattgcca tctaatgtta cactactagc
    12361 actcaaacta agagccaacg ctgccacagc agataaaatc acaaaacttt tcatattatc
    12421 ccctttgtaa gaaatttaac gtaattttaa ataaaaataa tttccaaaaa gtaatctttt
    12481 aaattttata tattttaata attttaaatt attttttata taataatgta ataaaatata
    12541 aatattgtta gtttatagat gtccgagcaa catttaaatt tgttactaaa agtagcatat
    12601 tagtagataa tttttttagt aaattcaagt gccaaagtcg caaaatatta taagaattta
    12661 taaaaaattt gctttatttc aactatgctc aacagctttt atacgtaatc gcgtcgttac
    12721 tagatatttt attattataa taacacaaac caaaaagctc gctataaata tcaccataac
    12781 ctaaatttat aatatatttt ggtacaaaaa tgtagaaaat ataaatttta aattaagttt
    12841 taaaattata taattaaaat aaaaaatata taacttacta ttaaaagata cgcgttgcgt
    12901 tatataaatt taaaataaaa aataacaaaa atggggttaa tttgagtaaa aaacataaat
    12961 ttgtaatctg taatcctgag ctttgcatag gctgtaaagc ctgtatgaaa gcatgcggta
    13021 aagaggctta taaacgcgga aaactagcaa aaccaaggct tgacgttata aaaatgacaa
    13081 acggagttat gccaaatcaa tgccgtcagt gcgacgacgc gccttgcgca ctagtatgtc
    13141 caagctcggc tttacgcaac gaaaatggat atgtagaaat gcatgagcaa ctttgcatag
    13201 gctgcgcttt atgcgtaaat gcttgcccat atggcgcgat tcatcttgat agcttagaga
    13261 tcccctcaaa tggatcaaat ttagatgaaa tggacgtgtg cggcgacggc tttatgagcg
    13321 tagcgataaa atgcgatatc tgcgatggca gaaatgaagg aagcgcttgc gtagaagtct
    13381 gtccaaaagg cgctttagta atgcttgatc ctataacaaa taaacacaaa tacggtaaaa
    13441 aactaaaaga cggtgataat atgtcaaatt ttatatctaa aattctagat tgcccgccgc
    13501 cgcaaatcat aatagcgcaa aaaaacaaac ctctaaaaga gaccggggaa gtgcagcaag
    13561 gagaagcaga tgcttgaaat aatttatacg tcgttctttt tggtaggaat tatatgctta
    13621 gttctttata gagtgccgaa aatcgctctt tatattggac ttgcgatacc ttgcataata
    13681 tccatattta gcacgatata ttttataaaa aatatcaatt caacttacgg ttttaaatta
    13741 gcaggaaatt tcttattttc tccacatttt attataactc cgcttagcgg attttttagt
    13801 tttatcataa cttttatagc aattggtatc tgcatatata caataggata tataaaagag
    13861 tttaaagaca ggggaaatct tgctgttttt gcagctttat ttaacttttt tatcctttct
    13921 atgctgcttg tagtttctag ctcagatgtt tttagtttca ttgttttatg ggaaattatg
    13981 actttaatat ctgctctttt gcttaaattt aatgatgaaa aacatagcaa taaaacagtg
    14041 atgatatatc ttagcatagc acaaatagga gcattttgca tacttatagc gcttcttttt
    14101 atctcatact ttgccggaag cttctcattt atacaatgga gcaaactaga tatagatcca
    14161 acagtcgcta cttgtattct tattctgctc ttaataggat ttggcagcaa aatcggaatg
    14221 tttccgtttc acgtatgggc accgcttgtt tatccgttgg ctccatcaaa cgtagcagga
    14281 atgttaagcg gtattatgtc taaaatgaca atattcggaa ttattcaatt tagcgttatt
    14341 ttgcctataa cttctggatt tgctcttagt gttgtagcat taggagccat tagcgcgctg
    14401 attggtataa cttacgcttt gatacaaaat gattatataa aattaatatc atatagctca
    14461 gttgaaaact taggtattat tatgcttgga gttggagttg gattttacgg tattagcata
    14521 gctgagccga ctctagtttt gcttgggttc ataggagctt tatttcacgt gcttaatcac
    14581 tcaacattta aatcattgct atttttaggt tcaggaagca tatatagcgt cactagaaca
    14641 aaaaatatga actctcttgg agggcttgct agaaaaatgc cttttactgc gctatttttt
    14701 ctaataggag ccattagtat atccgctctt cctccgctaa atggatttat cagcgaatgg
    14761 tttatttata gatctatgtt tatgggagcg cttgatgata gtatagcttc aagactgatt
    14821 tttgctcttg ctatcatatg tttagcgctt actggagcta tggtagttta tgcttttatc
    14881 aaactttacg gagttatatt tgccgggaca ccaaaagatg aaaacataca taacagagct
    14941 tgtgaaaaat cattctttat gccatttggc atgtttatac tagctgttag ttctatttat
    15001 tttgctgttt ttgcaaataa tataattcta ttcttaggaa acgtagtttt atatttagta
    15061 cctcaaacca tgtatagcat gaacataaat gttatttcaa tgcctgctat aatgatttta
    15121 cttatatttg ctttagcact tccgtttctg ctttttggac tatttggagc aaatatgagc
    15181 aaagtcagag caagcgaacc ttgggcttgc ggatttaaat ttagtccgca aatgagcatg
    15241 aactcaaatt cgtttgtcgg ggattttaaa agacttatta gcaaagttat caaatttaaa
    15301 acagaaacta agcagcaaaa ttactttagt aatgtagatt ataaaaccgg cactgaagat
    15361 gtttggtgga agattttata cgagccgatt atcaagttta atatgcttat agctgataaa
    15421 ataggtgctt ttcaaaacgg aagaagtagc ttttatgttg tatatatact agtttatcta
    15481 tatgctatgc tagtagttgg attttacttt ttgggggctt aaatggaagc tgttttacta
    15541 atgattttac aactttttgt tgcattggcg cttactccgt tgtttgatgg tatagctaga
    15601 aatctgcgtg gtaaaattca aagtcgcaaa ggttcaccga tattacagac gtactatgat
    15661 atatttaaac ttttaaaacg ttctcgcacg gctccaaact gcgtgcattg gttttttaaa
    15721 tttagtccgt atatgctttt tagcgtttgt gctatgcttg tgatgatgat acctataact
    15781 tatggcggat cagcaaacac cggagcagtt agcgatatca tagtcgtggt ttatctagtt
    15841 gcgcttttta gatttatctt tggagtcgca agcttagata gtgcaaatcc ttacgcagca
    15901 gtaggagcta gcagagagag tcttatagct atctatatag agcctataat gataatttgt
    15961 ttagtagtga tagcaatgct tgcaaaaaca acaaatcttg ctatcataaa agagcttata
    16021 caaaacgcgg aaataggcta ctcaagcgca tcttacgcag tagcaagtgt agcatttttg
    16081 tgggcgatgt atgttgaaac aggaagaaaa ccgtttgatc ttgcagaagc cgagcaagaa
    16141 gtacaagagg gtgtcatcgg cgaatacagt ggaaaagatc tggctttagt ggaaatggct
    16201 cttatgctaa aacagtttgc tatgataagc tttttcatag ttatgtttgt tcctatcggt
    16261 ttttcaagcc catttttaac tctcattgtt catcttattt tagtggggct tttttatgta
    16321 ggagcgattt tgatggacaa ctttggaccg agatttagga taatttcaag cttgaaattt
    16381 aactcagctt gcatactttt tatatctctt atatctctta gcctctatgt agtaggagta
    16441 tgatatggaa attttaataa ttttaatgat gattttaagt cttttggtat ttggttttag
    16501 aagttataaa ttaagcatta taagctacgt tttagaagct atagcactag tttgcgtgtt
    16561 tttgttttta gcaaacgaat acaaagcaaa tgaactgttt tcatgggcga taatcgcatt
    16621 ttttataaaa gttatagcag ttccgctcat tctctttact ctagtaaaaa agcttggggt
    16681 tactcacgaa gttgagcccg taggcggatt tttggtttca ccgctgatcg catttgcttt
    16741 ttctatagga tcggctatgc tgatagctcc tatatttatg gagttttcac ttatcaaaaa
    16801 cgaaactgct ttgataggcg gaatttttat atttatggta ggaatatttg gatttatact
    16861 tagaaattca tttgtaaagc aaattttatc ttactgttta tttgaaaacg gtattcatct
    16921 aagtctagct ctcacagctt ataattccca cgctttagtt gagcttggca ttcttagcga
    16981 cgctgttttt gccatcataa taatgagtat tttagcattt gcttactata aaatttacgg
    17041 cactcttgat acaagtatag ctgctagttt aaaaggttaa tttatggata ttttattttt
    17101 aattctactg cttcctttgg tatcggctct cattttattt gtatctcctt taaatgtaaa
    17161 agttttaaac cttttgcata tactttgcag cgccgcagta tctttagcac tactttgttc
    17221 tataagtaaa gttttaagct tgggtgccat atatgcattt aacgatatgt tgtttttaga
    17281 ctctttagga gctgtttttt tagtacttat aagtttgact ggattttgtg taaatttata
    17341 ctcgactagc tattttaagt ggcagttaaa ctcaaattct ttaaatttaa aacagataaa
    17401 aacaaatttc tgtttatctc atataaccac gtttgctatg actctaagct gtattagcaa
    17461 taatatggcg ataatgtggg ccgctcttga agcaaccact ttagcaacgg tatttatggt
    17521 ggcgctaaaa ggtgataaac gctcacttga aagcggatac aaatatataa tcatctgctc
    17581 ggtcggctta gcatttgcta tgtttgcgac catacttttg tacgcttcta gtttaaatac
    17641 tttacatgat gagaaaaatg cgattttgtt ttcaaattta atacttcacg caagtagctt
    17701 aaatcccgat gttttaaaac ttatatttat atttgcttta atcggttttg gaacaaaagc
    17761 gggcttagtg cctactcata cttggctccc tgatgctcac gctcagggtc cagctccaac
    17821 ttcagctatg cttagcggaa tcgttataaa atgcgccatg ttaggacttt tgcgttacta
    17881 cgctatcgct tcaaatgcaa ccggaggtaa ttttagcgaa caaataatgt tgataagcgg
    17941 tacattaacg cttttcgtat ctgcgttttt tcttatcaga caacatgatg taaaaagaat
    18001 gttcgcttac cattcagtag cacatatggg agttatagct tttgctcttg gagtcggtgg
    18061 aaaaataggc gtttttgcag ccgttttcca ctgtgcggct cacagcttta caaaagcttt
    18121 agcattccta accacaggaa acactgctag aatttacggg acaaacgata tgagtaaaat
    18181 ggggtgtatg atacatatcg ctccgctcac aaccgttttg tttggcatat ctatctgctc
    18241 actcgtagga gttcctggtt ttgctatctt tgtaagtgag tttttgacgt ttaaagccgc
    18301 tgttttaagc ggtcagtacg ctgctatcgt attatttgcg ctggctttaa ctatcatctt
    18361 tatagccgat ttttcacatt tttttatggc aagttttggt gaagttaaag gtgaagttaa
    18421 atttaaatca gaaatgagtt tatgggaaaa tttaccgctt atcgcattag catttttgat
    18481 aatcagcttt ggcatatggc agtttgataa cttttggata ttagtacaaa acagcgtcac
    18541 aatgataaaa ggaaactaat gagaggcgat aaatttatag atattttaaa aaatgagttt
    18601 aatattttag aaacaagcag acaatgtgaa gatcaaataa cgatattagt agatagaaat
    18661 gatctaccaa aagtcgttca taaactatac tacagtatcg gcggttggct ttctagtatg
    18721 gtagcaaacg atgaaagaac cataaatcaa agttacgcgc tttactacgt tttatctatg
    18781 gaaggctcga aaatgagcaa agaagacgga actatagatg agatacaaag tagcgaaaaa
    18841 tgctttatca cggttaaaac ccttatcccc caaaacgacc cttgttatcc ctccgttaca
    18901 cctttggttc ctgcttgtgt atggtatgaa agagaagctt atgatatgtt tggtttagta
    18961 gccgagggct tacccgataa aagaagactc gttcttagcg atgactggcc tgagaattta
    19021 tacccgctta gaaaagatgc tatggattat aaatttcgcc cggatccggt gcaaccaaaa
    19081 gacgaaccag actatgagtt tatgcgacca aacggctctg tgacggacat acctttagga
    19141 cctcttcata taacagccga tgagccgggg cattttaggt tgtactgcga cggcgacacc
    19201 atagtagatg ccgattatag actgttttat cagcaccgag gtatggaaaa actagccgaa
    19261 aacagactaa actataacca gatgagctac cttgcagaaa gagtatgcgg gatatgcgga
    19321 tttgctcact ctatagcttg cgttgaagca gtagaaagag gtatagggct tgaaattcca
    19381 cgccgtgcac aagctatcag gattatgagt agcgaaatag agcgaatgca ctcaaatctt
    19441 ttaaatttgg gcttggcttg tgaagttact ggaaattata cggcatttat gcatatattt
    19501 agagttcgcg aatacacgct tgaactagct caactcataa caggtggtag aaaaacatac
    19561 ggtactatcg tgatcggcgg cgttagacga gatatcacgc taaatgagat aaaacaatct
    19621 tacgaaatct tagaaaaaat tggcacccaa ctagatgaaa tttggcaagt cgtcatggaa
    19681 gataaacgcc aaataggacg ctggaaaggt ataggcatac ttgataaaca agtggcgcgt
    19741 gactttagcc cagtcggtcc aaacgtgcgc ggaagcggat ttaaaagaga tacgagatat
    19801 gatcatactt acggatttta caaagagctt gagcttactc ctaacgtcca gtttgacggt
    19861 gacgtgctaa gcagggaatt agttcgatat aacgactgca aacaagcctt gcggctagta
    19921 aaacagtgcc ttgatataat gccgggcggt gctattttta cagatactaa ctacagacta
    19981 caacctggaa cttactgctt aggatacgac gaagccccgc gcggggaaaa tatacactgg
    20041 atcatgcaag gcgactctca aaaagtatat cgctggagat gtagagcttc tacgtataat
    20101 aactggtcaa gcttaagata tcaacttcaa ggaaatacca tagcagacgc cgcacttata
    20161 gtatgtagtt tagatccttg ctactcttgc accgagcgcg tgactttagt aaatgtaaaa
    20221 agcggaaagt caaaagtgat aggcgaaaaa gagcttaaaa aatactgcca aagcctaaaa
    20281 gatagtccga caaaggatat aagatgaaaa tttacgatat agtcaaaaaa acaggtatcg
    20341 ttacaagtaa atatccatat gaaccttata tagtagaaga gcattttaga ggcaaaccga
    20401 cgtatcatta cacaaactgt ataggttgcg cggcttgcgg ggtagcgtgc ccgagcaacg
    20461 cgataagcgt aaaatgggag gatgggaaaa aattcataaa atggcgatac aactgcggta
    20521 gatgtatatt ttgcggtcgt tgcgacgagg tatgtcccac tgcggctata aggctaagca
    20581 atgattacga acttacggtt aaatttgata aatcagcact catccaagaa ggagagctag
    20641 aaagtgagct atgcagtgtt tgtggtaaag cgtttttgag taaaaaattc gtgcagtttt
    20701 gtgagcaaag gcttagcact ttaagcaaac aaaggctaga agaagccaaa aaatatctac
    20761 atatctgtcc tagctgcaag aaaaatgcaa tagtagagat gatgacaaac aaagagtata
    20821 aggcggtaaa ataatgtacg ttgtacctga tgatatacaa agatcaaacg atctaaactc
    20881 aaagctaaat ttacttaaaa acatcaaacg cagttttagc gtatttcgca tagactgcgg
    20941 aagctgcaac ggttgcgaaa tagagatatt tgccgctctt agtccgcttt gggatccaga
    21001 gcgatttgga tttaaactag tagcaaaccc gcgccacgca gacattctga tagtctcagg
    21061 acctatcact agacaaatgt actatccgct tcttagagcc tacgaagcca ctccagatcc
    21121 aaagatagta gttggctttg gtgcgtgcgg agtgagcggt gggatatttc acgatagtta
    21181 cgcggtttgg ggtggagccg ataagatttt accagttgat gtatttgtgc ctggttgccc
    21241 acctcatcca gcaagcatca tttatgcttt agcaaccgcg gtcggtctga tagaacaaaa
    21301 gctagaaaaa cagagcttca aagacgacga tttactaccg aatttaactc aaaaatcgct
    21361 acttgacaac gcttcttttg agcgcgatct acttgtaaaa gctaagtttt tgatgagcta
    21421 tatatacggc aggatcttat atgataaatt tataaccgct ctaaaaactt gcgtcaatcc
    21481 caaagatcca attcttgcaa aagacgcact tagcttagcc ataaaagagc aagacgatca
    21541 gagatatgct gaatgtctag ccgtactttt taatgaaatt tatttaaaat acacaaacgc
    21601 ttcaaatgaa tttcatataa atttagatca aatttgggat aaaaagtgat acaagtctgg
    21661 aaactcacaa aacgccacgt tgatgaaaac gccgaacttc cacaaattta caaacaaata
    21721 gtcacgttta gcacttgcgt aggacacggc gtaggaacga tagatttcaa cgaaaagata
    21781 gcagaatttg acgatgaaca gtggaataaa atgcttgata gcagtgatga atacgtcaaa
    21841 tttaaactcg gaaatgtaaa caaatatttt gaagtcgaga tcttgcctgt tcatgcaaaa
    21901 gtgctaaaag acaagcttcc aaactcaaaa tttagagata tactttcaag cttagatgaa
    21961 ggctatatcg tcctaaaaaa gagttaaaaa tgcccaaaac caaaaaagaa ctaaaaaaat
    22021 ctctactttg cataggcaat aaaatgcgag gcgatgacgc cgtgggttta tacgtgggcg
    22081 agttagtaga agagcagatg cctagctgga gagtatttta cggacaggac gtgcctgaga
    22141 acgagtttgg cgctattaga gagtttgctc ctgatatcat tgtggtagtc gatgcgatga
    22201 gcggctttaa agacgataag atagagtttt ttaaccttga gaacgagaga gattacatct
    22261 actccacgca caatttacct actccggttt tgctaagcta tcttagaacc atcactccaa
    22321 aaacgctgtt tttaggtatc tcggtgctac ttgaaaatgt tcttggcttt gaagaaggtc
    22381 ttagccaaaa cgcaaagata tctgccaaaa aggcagtgca aaagataaaa gagatagatt
    22441 taaatttaaa ataaaacata cccaaatatc tattgtttat atataaattt accaaattta
    22501 aaagtaaaaa tagatcatag aatttagaga aaaaagccgg aaaagcttcc ggctatggtt
    22561 ttagagtcta gactcgtaac gtctaagcat ataaagtctt ttaagcattt ttttgcgagc
    22621 tgaaattttt tgttttttac gaatttcagt cataggctca aaaaatcttc tagcacgaac
    22681 ttcagtaaca actaggttac gatcggtttg ttttttgaaa cgtctataag cttcgtcaaa
    22741 agactcatta ggatgtacct ttactcctgg cacagtcctc accacctttc agattaaaat
    22801 aagttgagat tgtatctaaa tttgacttaa atttgattta taaataaaaa atatataaaa
    22861 tacgtttaac ctatttttaa aatcataagt tatataattg ttccaagtta aatttataaa
    22921 ggatttacga atgtctgcaa atatcaaaca atacttagcg aactggactc catacgctac
    22981 aaaacgctac atagcttacg cagtagtcac cattatagca ctcgttttgc cttttatcag
    23041 aattaatgat aatcactttt tcttgcttag ttttgataaa aagcaacttc acctgctctt
    23101 tacatcattt gatatgcaag agctatattt gatgccgttt gtactaataa ttttattttt
    23161 aacgatattt tttctaacta ctcttggcgg aagaatatgg tgcggctggg catgccccca
    23221 aacctgtttt agggtgatat atagagatct tattcaaact aaaattttaa aaataagaaa
    23281 aaatattaga gataagcaaa aaaagttgat ggcgagtatt ttaaaaaaaa tgatagctgt
    23341 attcatttgg acatgtttat ccctagttgc ggcaagcaat tttttatggt attttgtgcc
    23401 gcctgaggat ttttttagtt acttagcaaa tcctgctcag cacaaacttt taataggaat
    23461 tttaatagga attactctat ttatcgttta tgacgtaatt attttagctg aaaatttctg
    23521 tatttacgta tgtccttacg caagagttca aagcgtaatg tttgacaatg atacggttca
    23581 agtaatatat gatgaaaaac gcggcggaaa aatatatgaa tgtcatacga aaataggtaa
    23641 aaaacctctt gaaaaagatg caaaatgtat aggctgtgat gcttgcgtac atatctgtcc
    23701 aacccatata gatataagac aaggaatgca gcttgaatgc ataaactgcc ttgaatgcag
    23761 cgacgcatgt acaaaagtta tggctggatt tggcgaaaaa agtcttataa attggacaag
    23821 tgcaaaatct ctgcaaaccg gaaaaaaggt aaattatttt agatttagaa ctatagctta
    23881 tatggtagtt ttatctatag ctattatagc tttgatattt atgagtacca aaaaggagca
    23941 tatgcttttg aatatcaacc gaacaacgga attatataaa ataaaagtgg aagattcgaa
    24001 atttgaagta caaaacgcat atacgttttt gatccaaaat acgcaaaaca aagtgcacga
    24061 gtactatttt gatgtaaatg acactagaat cagtataaat agacctcttg agcctataaa
    24121 actaaaagcc ggaggcaaaa gaaaaataat agtagtgctt agtacaaaag atactcttgt
    24181 cgacgaggta aacaaagata ctcctattga tatcactata aatgcttacg ccgttgacga
    24241 tataaacaca gttaaagttt caagggatac gatttttgta tttccaaaaa tgaccgaaat
    24301 aaataaagca attcaaaagc aagaaaatga gtaacgaaat actttctcaa ataaaaagta
    24361 aaaaagcaaa agatagatat gagttaatct tatctgtctc gctggaacta tttttaaaaa
    24421 acggttttga aaacactagc ttgaatgata ttatttcaaa aagcggcgga tctctttcta
    24481 ctatttatac gtatttcggt agtaaagagg gactttttaa agctataatc gatcgtggag
    24541 taaggcagtt tttaacagaa gtagagaatc aaatttatct tgactcttct gatgatttgg
    24601 agaaattttt atttaaattt ggtgaagaat ttttgaatgt agtttggaca aaagactctc
    24661 tgctgcttaa aaagctgatt ttgaacgaat catttaaaga taagtcacaa atagtagata
    24721 tattttacga aagtggtgtt aaaaaagtca atcaaatact cacggatttt tttagcaaac
    24781 catccgtaaa accaagattt aaaagcgatg atttggagct attggcattt agattttgct
    24841 acttgctcga agagccattt acagtaagaa gcgcaatact taaaagacac ttaaatatga
    24901 ataaacaaga gaaaaaagag tgggtaaaag agtgcgtaga gttctttttg agtgccgcac
    24961 taaaataaaa acttgaagtc cat
//
LOCUS       DAPPKW010000015        23329 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.015, whole genome shotgun sequence.
ACCESSION   DAPPKW010000015 DAPPKW010000000
VERSION     DAPPKW010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23329
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.015"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     repeat_region   1..1541
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=1..26
                     /rpt_unit_seq="caacacaaacattgtcattagcaaac"
     gene            complement(1901..1987)
                     /locus_tag="RPW04_000586"
     tRNA            complement(1901..1987)
                     /locus_tag="RPW04_000586"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1951..1953),aa:Leu,seq:caa)
     gene            complement(2096..2833)
                     /locus_tag="RPW04_000587"
     CDS             complement(2096..2833)
                     /locus_tag="RPW04_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaaA family protein"
                     /protein_id="HDX6294702.1"
                     /translation="MKILFSPSESKMSGGSRDASVNFSWVFPNLNDKRLEILEMYNSF
                     LKKANKNELQALFGLKKDNELEYYSSDLFSRPLMKAILRYNGVAYEHLNYRNLDERSR
                     KMIDENTIIFSNLYGVILAKDMIFDYKLKQGESIGGFRTEVFYKKYFSGVLDDFLDSD
                     ILDLRAGFYEKFYSLTKPYTTIKFLKNGKVVSHFAKAYRGIVLRCIALNQISSLDEFY
                     NMQIPNLKINKIIKNRLKTEIVVDIIG"
     gene            complement(2830..3336)
                     /locus_tag="RPW04_000588"
     CDS             complement(2830..3336)
                     /locus_tag="RPW04_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HDX6294703.1"
                     /translation="MEHEFSPWRAEYFKTRKDDGVTDHSCVFCDIAENIQNDEENFVL
                     FRAKNCFAVMNRYPYTLGEFMIIPYIHTDNIENLDKNIWSEMSDLVQLGVGVLKESLN
                     ANGVNIGMNLGSAAGAGIAEHIHYHLVPRWSRDTNFITTIAYTRVHGVPFLDQYHTLK
                     KAFQKIFK"
     gene            complement(3336..4112)
                     /gene="trpC"
                     /locus_tag="RPW04_000589"
     CDS             complement(3336..4112)
                     /gene="trpC"
                     /locus_tag="RPW04_000589"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HDX6294704.1"
                     /translation="MILDEIISKTKINLENIKENLPLCRLENALTNSYIPRDVKQVLK
                     QKNSINIIAEIKKASPSKGVIKEDFDPLKIAFEYEKAGVSAFSILTEPFYFQGSLEYI
                     ALVRRYTNTPILRKDFIVDIYQIAEARLYGADFILLIAKALDKFYLKTLFEYAKSLNL
                     EVLMEIHDETDLEKALFVDADIIGINHRNLQTFDMDMELCIKLIPLIPSGKIIVAESG
                     LYNNSELINLKKQGADAFLIGEHFMRQESIYNAVKDMKGE"
     gene            complement(4109..5404)
                     /locus_tag="RPW04_000590"
     CDS             complement(4109..5404)
                     /locus_tag="RPW04_000590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294705.1"
                     /translation="MYWCRAALIFTLFLAGCADKQSVGAKKNETFFKYSDINTTIDLE
                     AMKGFYLLGDAKSKDALEVFYMLYKTTKKPIFLKEALKIAFVIKDDRLDELITDAREI
                     LNADYDVIRIEIGYYILKSQIKDAKDLALNLIQKESDNSINHSILATIYLFNDEPIRA
                     LKEFKKAYEIEGSEENLLKLVDMLDNKLDRTNEAIRYLNNWIGENGCSKPVCFTLLNI
                     YSAKGELDLMIEVYIKLYEAYEESDFLNRALEILLYKKDVISAKELLEKYSFNEPILM
                     EIYAELKEFQKAYNVAQDLYNRSQNPEYMARMAIYKYEQSSKNISKFELDMVVKLFEG
                     SVYALNSPIYFNYYGYLLIDYEIDLKKGLDIAKKAYILDPNSPYIIDSIAWGYFKLGE
                     CKEAKMWMDKIQSDTKFMKEDEAKAHKTAIDKCFNKGTK"
     gene            complement(5380..5751)
                     /locus_tag="RPW04_000591"
     CDS             complement(5380..5751)
                     /locus_tag="RPW04_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HDX6294706.1"
                     /translation="MLKEFGFDYCFDSSKCEVCGAKCCTGDSGYIWISEAEMESLSSH
                     LKLSLPEFKKLFTYRVGVRFSLKEKEYNGAYACLFFDENNKNCSVYEFRPKQCRTFPF
                     WDYFKKHFNELEKECIGVERL"
     gene            complement(5745..6440)
                     /locus_tag="RPW04_000592"
     CDS             complement(5745..6440)
                     /locus_tag="RPW04_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HDX6294707.1"
                     /translation="MKLFQLKEGYRYNSDTLFLYDFISKNQIFGNVLDVGCGCGILGL
                     LLKRDFINLNLSSIDIQEINSTITQLNADVNNLVAAVICDDFSKFKSEIKFDFIVSNP
                     PFYNSQITKSENEHISISRYSSSLDPLSFFKSVNANLKPQGVLYFCYDARRVGEILPI
                     LSSLKLKLTKLRFVHSRISESSKLALFEAKKSSKSICGIYPPLIIFDENEFSGEVKEI
                     FKKSDTKSEIYEC"
     gene            complement(6437..8359)
                     /locus_tag="RPW04_000593"
     CDS             complement(6437..8359)
                     /locus_tag="RPW04_000593"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294708.1"
                     /translation="MKFRKFAQILFLVGTIFFILGCETKDEKALNQDKLKFSDLSMAE
                     QDRYISKDELDKLGSYLTLLNNRNIDINSDEIPSGSVDELRDKIAELIQKNRLLFADN
                     EELAKKNLEIITKLREQNSLRESENKLISAKYLDSMNEVEKQHYKNINDLTKKINEVQ
                     KENIQSIKSYEQKIIGLENKIDELEKELSKKDINFNEKVSSATKDQLEKNKELSQKNS
                     YLLEQTQVLKKQVDTLSKELDSKLADKKTQIDTLNQTILTKDNKINDLLASHTNEIIE
                     LQNKHSKALYDIKNELDRQKNDYFGELNLKNSELAKLNNDFKEYKLKKDEELKNAENR
                     VLINYKKIETQRLNAIKSDYERIIFEQNRTIAAFEGKMINLELKFKKDLEAKDANYVN
                     TLENLKQKALFLKNDEDRLRAEFDKNITSLKSQITLKNIQISELDSKIKELENEKNDI
                     KKIQNYEILNNMITKLNAQNEELKNYAKKALDEAKKMVLEAENKAKEQNDKLKNYYEE
                     LIKNIKNQDNQPVLSDINVDSKRFLSEISCLSLDKSAKLDKDCENKLNDMIKKYGKSR
                     IYEIKAVISDFKFLGDDKVGELKNVNLLNLKSTKDMLNAASKAINSKIKDPMLAYSKD
                     VLLEQSGYGFVIKVYE"
     gene            complement(8369..9322)
                     /locus_tag="RPW04_000594"
     CDS             complement(8369..9322)
                     /locus_tag="RPW04_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HDX6294709.1"
                     /translation="MENIYDVVVIGGGPFGIATVVEAKYNGFKNVLLLEKGDNHSQTI
                     RKFYKDGKRVDKVYKGLDSQTHGNVEFFDGTKESTLNYFDNLLDNGKIDAVFNIEVES
                     VKKDGDIFNIVTSKNTYKSKNVMIGIGRMGKPNKPEYKIPPSLTQIVNFNLNSCNCGE
                     NILVIGGGNSAAEYAIELSKCNTVTLCYRKEKFTRLNEINEAQVFEYFNDKKLNLKLG
                     IDVIGLDNENGKVKVNFSNNSSEIYDRIIYAIGGSTPVDFLQKCGIELNKDGEPIVDE
                     HLQTNTPRLFVGGDIASKNGGSIVVALNDAHTVIDYIIKSK"
     gene            9401..10624
                     /locus_tag="RPW04_000595"
     CDS             9401..10624
                     /locus_tag="RPW04_000595"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HDX6294710.1"
                     /translation="MEKLLNNLKNSSKSLSILTQTQRENLIINIANEIMSAKDEILSA
                     NKIDLDLAQDLSSALKDRLKLTSKSIENLCNSIKNIANLKDVIGVIKDGWQTKSGLKI
                     EKITIPLGNIATIYESRPNVTAEVAALCIKSANGCALKGGKEAKNTNLAIIKAIHKAL
                     QKCGLDKNCVVYLDIDRNEVKKLINMDKYLDLIVPRGGENLVKFVSQNATIPVLKHDK
                     GLCHIYVDEFADLDKALSICVNAKCSRPGVCNAAETILVHEEVANEFIPNLKKSLDEF
                     NVIIFGCKKTAKIIDCELANEQNYSTEYLDFKLNLKIVKNLEESLEHISEFSSGHSEA
                     VISESYSICERFLSLVDSACVYANASTRFSDGGEFGFGAEIGISTNKLHARGPVGLNE
                     LTTYKYIIRANGQIR"
     gene            complement(10786..12129)
                     /locus_tag="RPW04_000596"
     CDS             complement(10786..12129)
                     /locus_tag="RPW04_000596"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HDX6294711.1"
                     /translation="MSKWNRDSWRDYNILQQPHYPDKNELKNAEDKLKSLPPLVFAGE
                     VRNLKDELKNVTLGKSFLLQGGDCAESFSNFSANGIRDMFKIMLQMAIVLTFAGGCPV
                     VKVGRVAGQFAKPRSSDFEDIDGVKLPSYRGDIINGFDFTEEARIPDPKRMIDAYYQS
                     ASTLNLLRAFSRGGLANLNEVHRWNLGFIKKAELDNKFEKLADELTGALKFMEACGVT
                     TQNTPTLSETKLYTSHEALLLPYEEALTRVDSLTNEWYDCSAHMLWIGERTRGINDAH
                     VHFLSGIKNPIGCKIGPDGKPGDIISLAGKLNPDNEPGRLNIIIRMGADKIEDRLPAI
                     LNYVKKEGLNILWSIDPMHGNTIKASSGFKTREFNNVMREVKSFFEIHRACGTIAGGV
                     HLEMTGQDVTECVGGAFNVTEDSLGNRYETQCDPRLNADQALELAFLIADLVKKR"
     gene            complement(12388..14196)
                     /gene="recG"
                     /locus_tag="RPW04_000597"
     CDS             complement(12388..14196)
                     /gene="recG"
                     /locus_tag="RPW04_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012001384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDX6294712.1"
                     /translation="MKFDSDAKDLKSIGINSLLDLALMLPKSYDDLSISHTPNEGENS
                     VEIETKFSKRIGSMLTVTACCITWQCDIRLVIFNAKPWHYMAFKSGKTMFIHAKSSFS
                     YGSWQFINPKVVTKVGSIIPHYKTDITDAKLEKLIKKYLNLKNLTDEGLDLKEAKTLL
                     SIHENSKNSTKIIANLQNDPSTLRVLKFVEIYNYIKKLSSKKSQFPGVRIKPFNIDSW
                     LESLPFKPTNDQLAAIKDIKNDISQNIAAKRVIMGDVGSGKTLVMLAAALMIYPKPAV
                     LMAPTSILADQLYSEAKRLLPSFYNTVLVKKGAKNVDFSDANLIIGTHVLLYQSLPQS
                     PLVMVDEQHRFGSNQRKKIDELTRDFDKRAHFLQFSATPIPRTLSLIESQIVSFSFLK
                     EIPYKKNIHTIILQNSGFSGLLEHLKNEIQKNRQAIIVYPLVEESEMSSYQSLSEASG
                     FWESRFEKVYLTHGKDRDKEDTLKKFAYDGNILLTTTVVEVGISLPKLSTIVIVGAER
                     LGLATLHQLRGRVGRNGGEGWCYIYTKLKDPPNRLLEFSRTLDGFLVAKLDLKNRQAG
                     DVLDGTLQHGATFNYYDMEEDITQEATHRLCKFKAP"
     gene            complement(14186..15409)
                     /locus_tag="RPW04_000598"
     CDS             complement(14186..15409)
                     /locus_tag="RPW04_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDX6294713.1"
                     /translation="MEKLDIDIKGIKTSLIYEYSSSLPIVNLKLVFKVAGSIYAIKPG
                     LAKISAALLNEGTKQLGVNEFSKRLEMLAIDINASAGFESFSIEINCLKEHFKFAFDM
                     LIKLLSDPNYSEDTLNKLKINALGTIAANASDFDYQAKVKLNEILFNGTNLSMPSIGT
                     KSSIESIEIEDIRNFLIHNLDISNLFLVLGGDIEVCNVDFQALKNVLKKGKQREIEEI
                     HTSDECKKEFIVKQSEQAYIYFGSPFSVKDDEKYLASVATFILGSSGFGSRLMEEIRV
                     KRGLAYSVYARNDLNLSYKAISGYLQTKNESKDEAISVVQSEFEKFIGDGVSQKELDQ
                     AKNFLLGSEPLSKETLFKRLSIAQNEYYFGYELGEFDRNLNKIKALKLDRLNEFIKSH
                     DEILKQSFAVIYNEI"
     gene            complement(15425..16870)
                     /gene="pyk"
                     /locus_tag="RPW04_000599"
     CDS             complement(15425..16870)
                     /gene="pyk"
                     /locus_tag="RPW04_000599"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDX6294714.1"
                     /translation="MDKRTKIVATVGPASDSIETIEALAKEGVNVFRLNFSHGTHEYH
                     KSTLDKVREIEKRLGFRLGVLQDICGPKIRVGKLQNPFELKAGDKLIVVKDDIIGVQI
                     APNEYKLSINHPEISNLIKEGEYIYLYDGMIRAKVIKVADRIETIIENDGVLNSNKGV
                     NFPNTKLNIEVITEKDKKDLEWGAKNGVDFVAVSFVQNAKDVQKAKDLIKEFGGHAKV
                     FAKIEKFDAVENIDEIVRVSDGIMVARGDLGIEVPYYKVPSIQKSIIRKANEANRPVI
                     TATQMMLSMAKNESATRAEISDVANAVLDGTDAVMLSEESAVGINPVAVVRAMSATIA
                     ESEKIYPYGKFDEFSFVDETDMVASSTSRLATRIGVCSIISITSSGQSAVKMARNRPN
                     MDIIAVAHDEETARSLTIVWGVKPSLVIKKSRLNILLANAIQGLHRAGLISDECTYIM
                     TAGYPTGAIGSTNFIRILKKDQIDYYLDAAL"
     gene            complement(16932..17675)
                     /locus_tag="RPW04_000600"
     CDS             complement(16932..17675)
                     /locus_tag="RPW04_000600"
                     /inference="COORDINATES: protein motif:HMM:NF014414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDX6294715.1"
                     /translation="MKINLMKSLSIKSKDNIDSLDFYAKIEPLLGFYEAYDELYKKYL
                     NLIESLKFENGDLALDFGCGNGKFSLLLSSKFKVLGLDISPKMAEICSLKGIKTLACP
                     IDKLDMEFDLITAVSDVLNYMTQNELFKFFSSASNKLKPGGYLIFDLNTQFGFDSVAS
                     GSLYIKDKNNDLIIDSNYENKSLNTEFIYFEEQDNLYKKSKFEITQYYHSYKFIKDNC
                     PLELVKTMKIELFSDSLADKEIYIFQKQT"
     gene            complement(17635..18987)
                     /locus_tag="RPW04_000601"
     CDS             complement(17635..18987)
                     /locus_tag="RPW04_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HDX6294716.1"
                     /translation="MKEKHYQVAIVGGGISGGALLYELARYTDINSMVLIEKYGGLAT
                     LNSKGTANSQTVHCGDIETNYTFEKASKVRKTARMVVKYGLQHGYQNKYMFDGQKMAI
                     GVGDSEVEFIKKRYEEFKVLYPYIEFYDKDELSKIEPKIIYDANGFARNENVVGMGVK
                     SGEYTTVDYGAFTTTFVDNARNEGKECDLYLNSEVQNITQAGDKFFIETKNGLSISAN
                     FVVVNAGAHSLFLAHKMGYGLDFGCLPVAGSFYLTKQKLLNGKVYMVQNPKLPFAALH
                     GDPDILANGCTRFGPTALALPKLERYHGTYRSFMDFCKTLNLDGDIVKIFYDLFKDSE
                     IRNYILRNFLFEVPLLNKQLFVKDARKIVPSLQTGDIYYAKGFGGVRPQVLNKTEKKL
                     MLGEASINTKKGIIFNMTPSPGATSCLGNALRDVKEICAFLGSTFYEDKFNEELVDKE
                     "
     gene            complement(19069..20166)
                     /gene="dapE"
                     /locus_tag="RPW04_000602"
     CDS             complement(19069..20166)
                     /gene="dapE"
                     /locus_tag="RPW04_000602"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HDX6294717.1"
                     /translation="MEVVEILKELLKFKSITPDDDGAMNFINMFMDGFDADFVDVNGI
                     KNLILTKKFGDGVHLCFAGHIDVVPAGDGWDSDPFEPELKDGFVYARGAQDMKSGVAA
                     FLCACKDATKFNGTLSIILTSDEEGDGIYGTLEALKFLKSRGNLPDFALVAEPTSSST
                     FGDTIKIGRRGSVNGVVTINGVQGHAAYPEKCVNPVHQLASVFSDFAGYELDSGSKYF
                     GASKIVITDIRGGMEVVNVTPKSVKIMFNVRNSELTSCEDIKRYTEHIFNGFDFTLSL
                     KESSKPFLTDESSKIVIQAQKSIENICKISPDLSTSGGTSDARYFAAFGVPVVEFGVV
                     NDRIHAINERVLQSEVESLYLVFKDLIENFE"
     gene            complement(20169..20771)
                     /locus_tag="RPW04_000603"
     CDS             complement(20169..20771)
                     /locus_tag="RPW04_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HDX6294718.1"
                     /translation="MMESFIQGLFFGWGAAVPVGPINILIMSYALKSYKLGVATGLGA
                     MSVDVLYLVLLSFGVLQILNQPVLFNILAIFGSLFLIYIAYLTYKSADKLINQDLNLK
                     ENSFTRCFVKGAFLNLINPYIIGFWLSVSSFAAKSSSTTLSLAGLIAAIGIWILGLPF
                     AVSRSKRFISQGVAKIFAYFSACLMAVFAIMLLFNTFFKG"
     gene            complement(20781..22691)
                     /locus_tag="RPW04_000604"
     CDS             complement(20781..22691)
                     /locus_tag="RPW04_000604"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012772.1,HMM:NF013180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HDX6294719.1"
                     /translation="MLDKMSNKVLIAPLILIIFLFLIANFALFYMKFVEIYDTNGTSN
                     YYKYSKSTIEFVKNYIDGANDEDSINKRLKSLDFLYLKGVVLDINGSKFETKYKFGND
                     LSEFDVLSEYPDAKDKLKNTNNPFFAKKILLNNKVEISYIEKIDENRAIGYEKIMPFK
                     INTIYSKEFLEWFYTNMLFSLIAGVIFMITAVCIMLKFYFMLKKTMRLDNIEMKRINR
                     LLEIKNRALKKELYIDNLTNMPSRYKLERDIADLKHPRIIVIDIDDFSNISDYYGDMI
                     ANRVLIEVSSAIKEFAKINGLSAYNFRLDKFVLLEDSEFDIDRYEAIANDLIDKFKGY
                     IIRINDEYGENILIEICCSIGFCLDYKDPIKKALMALKRAKQEHKDYLCYFTYMDTTK
                     EYIRRKRHSHIISKAIMNNQVVPYFQPIFDKDKNVIKYEALVRIVNNEDGVLLPGIFI
                     KDSKLIKRYAYITKTIIEKCFLQAKLNPNVVISVNISIGDMIDGDVSAFIIEKLSEMQ
                     VAKQIVFEVLEDENMEDPDRVKSFIDKVRRMGSKIAIDDFGSGYSNFSYILKIKPDYL
                     KIDGSIIKRVSTQEDSYIVVSAIVAFAKKLGIKTIAEFVYNESIFKRCIEIGVDEFQG
                     FYLGEPNDKFID"
     gene            complement(22758..>23329)
                     /locus_tag="RPW04_000605"
     CDS             complement(22758..>23329)
                     /locus_tag="RPW04_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HDX6294720.1"
                     /translation="IEYYKAINEAKRGINLKDIKDKQRSVNKANELVSNIQKPQISLE
                     PLNLKIGDRVKYEKIKGEILSLNKNEVTILSDGLKLRVPINLLKRSGNQPNIPQKNIN
                     VKVQKPTNASVVIDLHGLRSEEAIARLDKFISDSLVMGFDEVLIKHGIGTGKLAYAVK
                     EFLKAHPSVKAYKDGTPSEGGFGSKVVKL"
BASE COUNT         7435 a         4415 c         3075 g         8404 t
ORIGIN      
        1 caacacaaac attgtcatta gcaaactaaa ttgtttaaat gtaataaatt aaaaggagga
       61 tggtttcaac acaaacattg tcattagcaa acagagctat aggcgaacta gaatcaaatg
      121 gcatactggt ttaaacacaa acattgtcat tagcaaacaa aagagattga tggaagtgag
      181 gttaaaacag ttctgtttca acacaaacat tgtcattagc aaacaaaaat gcattgtaaa
      241 gagcttataa gccttgctta gtttcaacac aaacattgtc attagcaaac ggtgatttta
      301 tataacattt ttgttaagtt ggattgtttc aacacaaaca ttgtcattag caaactttta
      361 ctttttattt aattcctggt ttttttggtg agtttcaaca caaacattgt cattagcaaa
      421 cgagctaaag gaatacaaag aggagataaa agatgtagtt tcaacacaaa cattgtcatt
      481 agcaaaccca agtcaaaaaa aatgggagta attcggcttt aatgtttcaa cacaaacatt
      541 gtcattagca aacgatccgt gttctagtta tagcgtcgtg cacttcaaag tttcaacaca
      601 aacattgtca ttagcaaacc ctttctgttt tttcatcaaa tatatcgcag aagggtttca
      661 acacaaacat tgtcattagc aaaccggaga gagcatggcg ccagaggtag ataacgggga
      721 gtttcaacac aaacattgtc attagcaaac taaaaatgca aagctaatca agcaaaaagt
      781 atcaaggttt caacacaaac attgtcatta gcaaacgaat aatcttttca gatctatcaa
      841 atttaaactc atgtttcaac acaaacattg tcattagcaa actttaagcg gtatcaacca
      901 ggataacgaa atagtttagt ttcaacacaa acattgtcat tagcaaacgg tgattttata
      961 taacattttt gttaagttgg attgtttcaa cacaaacatt gtcattagca aacttaacct
     1021 attatctata tatttcaact ctttttgcgg tttcaacaca aacattgtca ttagcaaaca
     1081 gtttttagct gctctaaatc ccttattagc tctggagttt caacacaaac attgtcatta
     1141 gcaaacgcag cataatatct tcaaaaatga gccttataaa aagtttcaac acaaacattg
     1201 tcattagcaa acgaatgcta tatagttaaa aatttcatcg aatccccagt ttcaacacaa
     1261 acattgtcat tagcaaacat ggacggaaat gagattgcta acgttgctcc ccggtttcaa
     1321 cacaaacatt gtcattagca aacacaacag gagatagtct cttgccatct tgcttacacg
     1381 tttcaacaca aacattgtca ttagcaaaca aaagggttct agcttagttc gtaggtccct
     1441 ttatagtttc aacacaaaca ttgtcattag caaacagtct ttgaagactt agcttacaat
     1501 gtagcttacg ggtttcaaca caaacattgt cattagcaaa ctataataaa ctcatcatct
     1561 aagtaaattt aaaaaagcaa ttaagataaa aaataaatta aaagatatta tctaaaacta
     1621 ttaaaaatag attatttgtt atatatataa tatagctata aataatgaga ataaatttat
     1681 tttccaatct aaattaaaaa aataacaata ataagttaaa tatcatagga acattaaatt
     1741 taaactattt atctatgttt ttaaaagttt aactaaaatt aggttggaaa aagcttaatg
     1801 cagtataaaa tataaatttg tagttagtgg tatataaata ttattattgc tataaattaa
     1861 aactaacatt aaaattgagt tgggttatat acaaaacccc tggtgcccaa agtcggactc
     1921 gaaccgacac acggtttccc gtaccagatt ttgagtctag cgtgtctacc aatttcacca
     1981 tttaggctta gagtaataaa taactataaa atagaagttg gattatacaa aaaattatat
     2041 taaatttagt ttaagtataa aacatatctg ttttaaattt aaaaatagct gaaacttagc
     2101 cgattatatc aacgacgatc tctgttttta atctattttt aataatttta tttatcttta
     2161 ggttaggaat ttgcatatta taaaattcat ctaaactaga tatctgattt aatgcgatac
     2221 agcgaagcac gatccctcga taagcttttg caaaatgact tacgacctta ccatttttta
     2281 aaaatttaat agtagtatat ggcttggtta gactataaaa tttttcataa aatccagccc
     2341 taagatctaa aatatcagaa tctaaaaaat catctaaaac accactaaaa tacttcttat
     2401 aaaagacttc ggtacgaaaa ccacctatgc tttcaccttg ttttaactta taatcaaaaa
     2461 tcatatcttt tgctaaaatc acaccatata aatttgaaaa aataatcgta ttttcatcaa
     2521 tcatttttct tgatctttca tccaaatttc tataatttag atgctcataa gcaacgccat
     2581 tataacgtaa aatagccttc ataagtggac gagaaaacag atcgctagag taatattcaa
     2641 gctcattatc ttttttcaaa ccaaacagag cttgcagctc atttttatta gcttttttta
     2701 aaaaactgtt atacatctct aaaatttcca gacgtttatc atttaaattt ggaaaaaccc
     2761 atgaaaaatt taccgatgca tctctagatc cgccagacat cttactttca cttggagaaa
     2821 atagaatttt cacttaaaaa tcttttgaaa agctttcttt aatgtgtgat attgatctaa
     2881 aaacggaact ccatgcactc ttgtatatgc tatggtcgtg ataaaattcg tatctctact
     2941 ccagcgagga actaaatgat aatgtatatg ctcagcgatc ccagcacctg ctgcagagcc
     3001 taaattcata cctatattta caccatttgc attaagactt tcttttaaaa ctccgactcc
     3061 taactgaaca agatcgctca tttcagacca tatatttttg tctaaattct caatattgtc
     3121 ggtatgaata taaggtatta tcataaattc gcccaaagta tatggatatc tgttcattac
     3181 ggcgaaacaa tttttagccc taaaaagcac aaagttttct tcgtcgtttt ggatattttc
     3241 agcaatatcg caaaaaacac aactatgatc cgttactcca tcatcttttc tagtcttaaa
     3301 atactcagcc ctccaaggag aaaactcatg ttccattact cacctttcat atcttttacc
     3361 gcattataaa tactttcttg acgcataaaa tgttcaccta ttaaaaacgc atcagcacct
     3421 tgttttttta aatttattag ttctgaattg ttatataatc cactctccgc aactataatt
     3481 ttgccactag ggataagagg tataagcttt atgcaaagct ccatatccat atcaaaagtt
     3541 tgtagatttc tgtgattaat gcctattata tcggcatcta caaataacgc tttttcaaga
     3601 tcggtctcat cgtgaatttc catcaaaact tctaaattta aactttttgc atattcaaaa
     3661 agagttttta agtaaaactt atcaagcgct tttgctataa gaagtataaa atccgcccca
     3721 tacaacctag cttcggctat ttgataaata tcaactataa aatcttttct taaaatagga
     3781 gtattagtat atcttctaac tagtgctata tactccaaac ttccttgaaa ataaaaaggc
     3841 tcggtcaata tagaaaatgc gctaacacct gctttttcat actcaaaagc tatttttaat
     3901 ggatcaaaat cttcttttat cacgcctttg ctcgggcttg ccttttttat ttcagctatt
     3961 atatttatgc tatttttttg ctttaaaacc tgttttacat ctcttggtat atatgagttt
     4021 gtaagtgcat tttctagcct gcataagggt agattctctt ttatgttttc taagtttatc
     4081 tttgtttttg atattatctc atcaagtatc actttgttcc tttattaaaa catttatcaa
     4141 tagcagtttt atgggctttt gcttcgtctt ctttcataaa tttagtatcg ctttgtatct
     4201 tgtccatcca cattttagcc tccttgcact cgccaagctt aaaatatccc catgcaattg
     4261 aatctataat ataaggagaa ttcggatcta aaatataagc ttttttcgca atatcaagcc
     4321 cttttttcaa atctatctca taatcaatca ataaataacc gtaataatta aagtaaatag
     4381 ggctatttaa agcataaaca gaaccttcaa ataacttaac caccatatct aattcaaatt
     4441 tactgatatt tttagaactc tgttcgtatt tatatatagc cattctagcc atatattctg
     4501 gattttgcga tctattatat agatcttgag caacattata agctttttga aactctttta
     4561 actcggcata tatctccatc aaaataggct cgttaaaact atacttttct aaaagttctt
     4621 tagcagagat aacatctttt ttataaagca aaatttccaa agctctgttt aaaaaatcgc
     4681 tctcttcgta agcttcatat agttttatat acacttcaat catcaaatca agctcacctt
     4741 tagcagagta aatatttagc agagtaaagc agaccggctt agaacagccg ttttccccta
     4801 tccaattatt aagatatctt atagcctcat ttgttctatc tagcttatta tcaagcatat
     4861 ctacaagttt taataaattt tcttcactgc cctcaatctc ataagctttt ttaaactctt
     4921 ttaaagctct tataggttca tcattaaaaa gataaatagt cgctaaaata gagtgattaa
     4981 tgctattatc gctctctttt tgtattaaat ttaaagcaag atctttagca tctttaatct
     5041 gtgattttaa aatataatac cctatttcga ttcttataac atcataatca gcgtttaaaa
     5101 tctctctagc atctgttata agctcatcta atctatcatc ttttatcacg aaagctatct
     5161 taagagcctc ttttaaaaaa ataggctttt tagtcgtctt gtaaagcata taaaatactt
     5221 ctaatgcatc tttcgatttt gcatctccaa gcagataaaa ccctttcata gcttctaaat
     5281 ctatagttgt atttatatca gaatacttaa aaaaagtttc atttttcttc gcgccaacac
     5341 tctgtttatc tgcacaaccg gctaaaaata aagtgaaaat cagagccgct ctacaccaat
     5401 acattctttc tccaattcat taaaatgctt tttaaaataa tcccaaaacg gaaacgtcct
     5461 acactgtttt ggtctaaatt cataaacact acaattttta ttattttcat cgaaaaataa
     5521 gcaagcatac gcgccattat actctttttc ctttaaacta aatctaactc ctacgcggta
     5581 cgtaaaaagt tttttgaact ccggtaagct aagctttaaa tgtgagctaa gagactccat
     5641 ctcggcttcg cttatccata tatatccgct atctccggtg cagcatttag caccgcatac
     5701 ttcacacttt gagctatcaa agcagtagtc aaaaccaaac tcttttaaca ctcgtaaatc
     5761 tcactttttg tatccgattt tttaaatatc tctttaactt caccgctaaa ctcattttca
     5821 tcaaaaatta taagaggagg ataaattccg catatagatt ttgaactttt ctttgcttca
     5881 aacagagcta attttgaact ttcacttatc cttgaatgca caaatctaag ctttgttagc
     5941 ttgagtttta aactgcttaa aataggcaaa atttctccta ctcttctagc atcgtagcaa
     6001 aaatacagga ctccttgagg ttttaaattt gcatttacgg acttaaaaaa acttaacgga
     6061 tcaaggctag aactatatct gctaatactt atatgttcat tttcgctttt tgtgatttga
     6121 ctattataaa acggcggatt tgaaactata aaatcaaatt taatctcgct tttaaattta
     6181 gaaaaatcgt cacaaataac agctgcaaca agattattaa catccgcgtt tagctgcgtt
     6241 atggtggaat ttatctcttg gatatctatg gaactaagat ttaaatttat aaaatccctt
     6301 tttaaaagca atcctaaaat tccgcagccg cagcccacat cgagcacatt accaaaaatc
     6361 tgatttttag atatgaagtc atataaaaac agagtatcgc tgttataacg atacccttct
     6421 tttagttgaa atagtttcat tcataaactt taatgacaaa tccatatccg ctttgctcta
     6481 gtaaaacatc tttagagtat gctaacatcg gatctttaat cttagaattt atggcttttg
     6541 aagctgcgtt taacatatct tttgtcgatt ttaaatttaa aagatttacg ttttttagct
     6601 caccgacttt atcgtctcct aaaaatttaa aatcgcttat aacggctttt atctcataaa
     6661 tacggctttt gccatacttt tttatcatat cgtttaattt attttcgcaa tctttatcaa
     6721 gctttgcact tttatctaaa ctcaaacagc taatttctga taaaaatctc tttgaatcta
     6781 catttatatc acttaaaacc ggctgattat cttgattttt tatatttttt atcagctctt
     6841 cataatagtt ttttagctta tcgttttgtt cttttgcctt attttcagct tctaaaacca
     6901 tttttttagc ttcatctaaa gcctttttag cataattttt gagctcttca ttttgcgcat
     6961 ttagcttagt tatcatgtta tttaaaattt cataattttg aatttttttg atatcgtttt
     7021 tctcattttc cagctctttt attttagaat ccaactctga tatttgtatg ttttttagcg
     7081 tgatttgcga ttttaaagat gttatatttt tatcaaattc cgctcttaac ctatcttcat
     7141 cattctttaa aaaaagcgct ttttgtttta aattctcaag cgtatttaca tagtttgcgt
     7201 ccttagcttc taaatctttt ttaaatttaa gctccaaatt tatcattttt ccttcaaatg
     7261 cggctatcgt tctgttttgt tcaaaaatta tcctctcgta atcacttttt atggcattta
     7321 atctttgagt ttctatcttt ttataattta ttaaaaccct attttcagca ttttttaact
     7381 cttcgtcttt ttttagctta tactctttaa aatcgttatt caactttgca agctcgctat
     7441 tttttaaatt caactctcca aaatagtcgt ttttttgtct atctaactca ttttttatat
     7501 catataaagc ttttgaatgc ttgttttgaa gctcaattat ctcatttgta tgagacgcta
     7561 agagatcgtt tatcttatta tctttggtca aaatagtctg atttaaagta tcaatctgag
     7621 tttttttatc ggctaattta ctatctaact ctttagataa agtatctact tgttttttaa
     7681 gtacctgagt ctgctctaaa agatagctat ttttttgtga aagctctttg tttttttcta
     7741 actgatcttt tgtagcactt gaaacttttt cgttgaaatt tatatctttt ttgctaagct
     7801 ctttttctaa ctcatcgatc ttattttcaa gaccgattat cttttgttca tatgatttta
     7861 tgctttggat attttctttt tgaacttcgt ttatcttttt agtaagatca ttgatatttt
     7921 tatagtgttg cttttcgacc tcattcatag aatcaagata ttttgctgaa attagtttat
     7981 tttcagactc cctaagagaa ttttgctctc ttaactttgt gataatttct aaatttttct
     8041 tagctaattc ttcattatct gcaaaaagaa gtctattttt ttgaataagt tcagcaattt
     8101 tatctcttaa ctcatcgacg cttcctgagg ggatctcatc actatttata tcaatatttc
     8161 tgttatttaa aagagttaga taactaccta atttatctaa ctcgtcttta ctgatatatc
     8221 tgtcttgctc cgccatagaa aggtcgctaa atttaagttt atcttgattt agagcttttt
     8281 catctttggt ctcacaacct aaaatgaaaa aaatagtacc gactaaaaat aaaatttgag
     8341 caaattttct aaatttcaac acgaaacctt attttgattt tataatataa tcaatcacgg
     8401 tatgagcatc atttaaagct actacgatac ttccgccatt tttactagct atatctcctc
     8461 ctacaaacag ccttggagta tttgtttgaa gatgctcatc tacgatcggc tctccatctt
     8521 tatttaactc tataccgcat ttttgtaaaa aatcaaccgg agtagagccg cctatagcat
     8581 atataattct atcgtaaatt tcactagagt tattactaaa attaactttt accttaccgt
     8641 tttcattatc tagaccaata acgtctattc caagctttaa gtttagtttt ttatcgttaa
     8701 aatattcaaa aacttgtgct tcgtttatct cgtttaatct agtaaatttc tcttttctat
     8761 agcaaagcgt tacggtgtta catttgctaa gctctatagc gtactctgct gcggaatttc
     8821 cgccgcctat gactagtata ttttcaccgc aattacagct atttagatta aaatttacta
     8881 tttgagttag tgatggcgga attttatact cgggtttgtt aggtttgccc attcttccta
     8941 ttcctatcat cacattttta gatttatagg tgttttttga tgttactata ttgaatatat
     9001 cgccgtcttt ttttacgctt tcaacttcaa tattaaacac cgcgtctatt ttgccattgt
     9061 caagaagatt atcaaagtaa tttaaagtac tctcttttgt accgtcaaaa aactcgacat
     9121 ttccatgagt ctggctatct agacctttat aaactttatc gactctcttt ccgtctttgt
     9181 aaaactttcg tatggtttga gagtgattat cacctttttc aagcagaaga acattcttaa
     9241 agccgttgta tttggcttca acaacagtgg ctataccaaa aggtccgccg cctataacga
     9301 ccacatcgta tatattttcc attttttctc cgtatattat ttgttttaaa gcttataaat
     9361 cgtaaaattt accaaaattc tccttaaaga acaggtaaaa atggaaaaat tactaaataa
     9421 tttaaaaaac tcatcaaagt cactgtctat tctaactcaa actcaaagag aaaatttgat
     9481 tattaacatt gcaaacgaaa ttatgagtgc caaagatgaa attttatctg ctaataagat
     9541 tgatttagat cttgctcaag atctcagcag cgcattaaaa gatagattaa aattaactag
     9601 taaaagcata gaaaatctat gcaactccat aaaaaatata gcaaatttaa aagatgttat
     9661 aggcgtaata aaagatggtt ggcagacaaa atccggacta aaaatagaaa aaatcaccat
     9721 tccgcttggt aatatagcta cgatttatga gtctcgccca aatgtcacgg ccgaagtagc
     9781 cgcactttgt ataaaaagtg caaacggatg cgctctaaaa ggcggcaaag aagctaaaaa
     9841 tacgaacttg gccataataa aagccatcca caaagcttta caaaaatgcg gtttagacaa
     9901 aaactgcgtt gtttatctag atatcgatag aaacgaagtc aagaagctta taaatatgga
     9961 taaatatcta gatcttatag ttcctagagg tggtgaaaac ttagttaaat tcgtaagcca
    10021 aaatgcaaca atcccggttt taaaacacga taaaggacta tgtcatatct atgttgatga
    10081 gtttgcggat cttgataaag cattaagtat ttgtgtaaat gcgaaatgct cacgaccagg
    10141 agtgtgcaac gctgctgaaa ctattttggt tcacgaagaa gtggccaatg agtttatacc
    10201 gaatttaaaa aagtcgctag atgagtttaa tgttataatt tttggctgca aaaaaacagc
    10261 aaaaatcata gattgtgagt tggcaaacga acaaaactac tctactgaat accttgattt
    10321 taaactaaat ttaaaaatag taaaaaattt ggaagaatct ctagaacata taagcgaatt
    10381 tagctcagga cactctgaag cagtaattag tgaaagctac agtatttgtg agagattttt
    10441 aagcttagta gatagcgctt gtgtttatgc aaacgcatct actcgtttta gcgacggcgg
    10501 cgagtttgga tttggtgcag agatcggtat aagcacaaat aaacttcacg caagaggtcc
    10561 ggttggatta aatgagctca ctacttataa atacataatc cgcgcaaatg ggcagataag
    10621 ataatatact tttataatat ttttttatta atttaagtca gacaagtaaa atataaaaaa
    10681 tataaatttc aaaatttagt tggattataa aatttcataa tccaactaaa tttattcttt
    10741 aaatttatta atttaaattt aaaaatgtat taaaaacggt taaatttagc gctttttaac
    10801 taaatcggct atcaaaaatg caagctctaa ggcttgatcc gcattcaacc ttggatcgca
    10861 ttgagtttca tacctatttc ctaatgaatc ttcagtaacg ttaaacgcac ctccaacaca
    10921 ctctgttaca tcttgaccgg tcatctcaag atgtactccg ccagctattg taccgcacgc
    10981 tctatgaatt tcaaagaaac tcttgacctc tctcataaca ttattaaact cacgtgtttt
    11041 aaatccactg ctagctttta tagtatttcc atgcatagga tctatgctcc aaaggatatt
    11101 aagtccttct ttttttacat agttcaatat agcaggaagt ctgtcttcta tcttatctgc
    11161 tcccattcta ataatgatat ttaggcgtcc tggttcatta tctggattta gtttccctgc
    11221 taaagatatg atatcgcccg gtttgccatc aggtcctatt ttgcacccta tcggattttt
    11281 tataccgctt aaaaaatgca cgtgcgcatc attgattccg cgtgttcttt cacctatcca
    11341 aagcatatga gccgaacaat cataccattc attcgtaagg ctatctactc tagttaaagc
    11401 ctcttcataa ggcaaaagca atgcctcgtg agacgtatat agttttgttt cgctaagcgt
    11461 cggagtattt tgagtcgtca caccgcacgc ttccataaat ttaagcgccc cggtaagttc
    11521 atctgctaat ttttcaaact tattatcaag ttctgctttt tttataaatc caagattcca
    11581 tctatgaact tcatttaaat ttgcaagccc tccgcgcgaa aatgctctta ataaatttag
    11641 cgtagaagca ctttgataat aagcatctat cattcttttt ggatctggta ttctagcctc
    11701 ttccgtaaaa tcaaaaccat ttataatatc gcctctatag cttggaagtt tcactccgtc
    11761 gatatcttca aaatcgctac ttctaggctt agcaaattga cctgcgacgc gacctacttt
    11821 gactacagga cagcctccgg caaatgtcaa tactattgcc atttgaagca ttattttaaa
    11881 catatctctt ataccgtttg cactaaaatt agagaaactt tcagcacaat ctccgccttg
    11941 caacaaaaag ctttttccta gcgtaacgtt ttttaattca tcttttaaat ttctgacctc
    12001 tccagcaaaa acgagcggcg gtagactttt tagcttatct tcagcatttt ttagttcatt
    12061 tttatccgga taatgcggtt gttgcaaaat attataatct ctccagctgt ctctattcca
    12121 cttactcata ttataccttt aattttatat aaaataatgc ttaattatat ctaaattgtt
    12181 cttaattttt cttttacaat caataaattt tatttgtaac aatcaaaaat agatcttgga
    12241 tatatcatat tcatacataa aaggatatta agcaacctaa aaaactgaac tctcactaag
    12301 caagatagaa gctataaata gcgcaaacta tcttataagc gagatccaaa tgaaaaccac
    12361 ttctgttaaa taatatttaa agccttttta tggggcttta aatttgcaaa gcctatgggt
    12421 tgcttcttga gtaatgtctt cttccatatc ataataattg aatgtagctc catgctgtaa
    12481 agttccgtct aaaacgtctc ctgcttgacg atttttgaga tctaattttg ccactaaaaa
    12541 tccgtccaaa gtcctagaaa actctaaaag tctatttggc ggatctttta gtttagtgta
    12601 tatatagcac caaccctcgc cgccgttcct accgactctc cctctgagct gatgaagagt
    12661 agcaagacct aaacgctcag cacctactat aactattgta gagagttttg gtaacgatat
    12721 acctacttct acgacagtcg tcgtaagtaa aatatttcca tcgtaggcaa atttttttaa
    12781 agtatcttct ttatctctat cttttccgtg agttaaatac actttttcaa atctagattc
    12841 ccaaaaaccg ctagcttcac ttaaactttg ataactgctc atttcgcttt cttctacaag
    12901 tggatatact attatagctt gtctgttttt ttgaatttcg ttttttaaat gctctaaaag
    12961 tccactgaat ccagagtttt gcagtatgat ggtatgaata tttttcttat agggaatctc
    13021 ttttaaaaaa ctaaaactaa caatctgaga ctctataaga ctaagcgttc ttgggatagg
    13081 agtagcgcta aattgcaaaa aatgagctct tttatcaaaa tcccttgtaa gctcatctat
    13141 ctttttgcgc tgatttgagc caaatctatg ttgttcatca accataacaa gtggactttg
    13201 cggcaaggat tgatacaata aaacatgagt tccgatgatc aaatttgcgt cactaaaatc
    13261 tacattttta gcaccttttt taactaatac ggtattataa aagctaggta aaagtcgctt
    13321 tgcttcacta tataactgat cggccaatat actagttggc gccatcaaaa ccgccggttt
    13381 aggatatatc ataagagcag ctgcaagcat aacaagagtc ttaccgctgc cgacatctcc
    13441 cattataact ctttttgcgg ctatattttg acttatatcg ttttttatat cttttattgc
    13501 ggctaattga tcatttgtcg gtttaaatgg taaactttca agccaactgt cgatattaaa
    13561 aggctttatt cgtactccag gaaattggga ttttttgctg cttaattttt ttatataatt
    13621 ataaatttct acaaatttaa gaactctcaa agtactcgga tcgttttgca aatttgcaat
    13681 tatttttgtg ctatttttac tattttcatg tatgctaagc aaggttttag cttcttttaa
    13741 atcaagccct tcatctgtaa gattttttaa atttaaatat ttttttataa gtttttctag
    13801 ttttgcatct gtaatatctg ttttataatg cggtattatc gagcctactt ttgtgactac
    13861 tttgggattt ataaattgcc atgatccata actaaagctt gattttgcat gaataaacat
    13921 cgtctttccg ctcttaaaag ccatatagtg ccacggtttt gcattaaata taactaatct
    13981 tatatcgcat tgccatgtaa tacaacatgc cgtaacagtg agcatagagc ctattctttt
    14041 actaaattta gtctctatct caacgctatt ttcaccttca tttggggtgt gtgaaatact
    14101 taaatcatca taggatttag gcaacatcaa agctaaatca agaagtgagt ttataccgat
    14161 gctttttaga tctttggcgt cgctgtcaaa tttcattata aattactgca aaagactgtt
    14221 ttagtatctc atcgtgagat tttatgaact catttaatct atcaagcttt aaggccttta
    14281 tcttatttaa atttctatca aattcaccaa gctcatatcc aaaataatac tcattttgcg
    14341 ctatagaaag acgcttaaat agagtttctt tagacaaagg ctcgctacca agcaagaaat
    14401 ttttagcctg atcaagctct ttttgactaa ctccgtctcc tataaatttt tcaaactcag
    14461 actgaactac gcttatggcc tcgtctttac tctcattttt tgtctgcaaa tatccactaa
    14521 tcgctttata cgataaattt agatcatttc tagcatatac agagtatgca agacctcttt
    14581 ttactctaat ttcttccata agtctgcttc caaaaccgct gcttccaagt ataaaagtag
    14641 ccacactagc tagatatttt tcatcatctt ttacactaaa tggagagcca aaatatatat
    14701 atgcttgttc gctttgtttt acaataaact cttttttaca ttcgtcgctt gtatgaattt
    14761 cctcaatctc tcgttgtttt ccctttttta aaacattttt caaagcttga aaatcaacat
    14821 tgcaaacctc tatatctccg cccaaaacta aaaataaatt tgatatatca agattatgta
    14881 tcaaaaaatt tctaatatcc tctatctcta tgctctctat actagatttt gtaccgatag
    14941 aaggcatact taaatttgtt ccgttaaata aaatttcatt taacttcact tttgcttgat
    15001 agtcaaaatc gctagcgttc gccgctatag ttcctaaagc attgatcttt aacttattta
    15061 acgtatcttc actatagttt ggatcactca aaagtttaat caacatatca aaagcaaatt
    15121 taaaatgctc ttttaaacag tttatctcta tagaaaaact ttcaaatccc gcgcttgcat
    15181 ttatatctat agcaagcatt tcaaggcgtt tgctaaactc atttactcca agttgctttg
    15241 taccttcatt aagcaaagcg gcacttatct ttgcaagacc tggttttata gcataaatgc
    15301 ttcctgctac cttaaacaca agttttaaat ttacaatagg caaagacgaa ctatactcgt
    15361 aaataagcga agttttaata ccttttatat ctatgtctaa cttttccaaa tttcccccat
    15421 cacgctacaa agcagcgtct aaataatagt ctatctgatc tttttttagt attcttataa
    15481 aatttgtact tccaatggcg ccagtaggat aaccggcggt cattatataa gtacattcat
    15541 cgcttataag tcctgctcta tgcagtcctt gaatagcgtt tgcaagtaag atatttaacc
    15601 tgcttttttt tataacaaga gacggtttta ctccccaaac tatagtcaaa cttctggccg
    15661 tttcctcgtc gtgagccact gctatgatat ccatatttgg acgatttcta gccattttca
    15721 ccgcactttg accagaactt gttatagaga taatagaaca aacccctatc ctagtagcta
    15781 gtcttgaagt tgagcttgct accatatcgg tttcatctac aaaagaaaac tcatcgaatt
    15841 taccgtaagg atagatcttt tcactctctg ctatggttgc gctcatcgct cttacaaccg
    15901 caacaggatt tatacccaca gcactttctt cacttaacat aaccgcgtca gttccatcta
    15961 aaacggcgtt tgccacgtcg ctgatctcgg ctcttgttgc actttcgttt tttgccattg
    16021 aaagcatcat ctgagttgcg gtgatgactg gtctgtttgc ttcatttgct tttcttatga
    16081 tacttttttg aatggatggc actttgtaat atggaacttc tatgccaaga tctccacgag
    16141 ctaccattat accgtcactc acgcgtacta tctcatctat attttcaacg gcgtcaaatt
    16201 tttctatctt tgcaaaaact ttagcgtgtc cgccgaattc ttttatgaga tcttttgctt
    16261 tttgcacgtc tttcgcattt tgtacaaaac taaccgcaac aaaatccacg ccgtttttcg
    16321 cgccccattc tagatctttt ttatcttttt ctgtgatgac ttcgatattt agcttagtat
    16381 ttggaaaatt tacaccttta tttgagttta aaactccatc attttcgata atagtttcta
    16441 tccgatctgc aacttttatg actttagctc taatcattcc atcatataaa tatatatatt
    16501 cgccctcttt tataagattt gaaatttcag gatgatttat actaagttta tactcatttg
    16561 gagcaatttg aacgccgatt atatcgtctt tgacgactat gagtttatct cctgctttta
    16621 gctcaaacgg attttgtagc tttcctaccc ttatctttgg tccgcaaata tcttgcaaaa
    16681 cacccaatct aaatcctaat ctcttttcaa tctccctaac tttatctaat gttgatttat
    16741 gatattcatg cgttccgtga gaaaaattta gtctaaatac gttcacgccc tcttttgcta
    16801 aggcttctat cgtctctatg ctatcactag ccggtcctac tgtggctacg atttttgttc
    16861 ttttatctat catagactta ctccttattt tttatcttaa ttatagcaaa aattaaacta
    16921 caatttggct actaagtctg tttttgaaat atataaattt ctttatcggc taaagagtcg
    16981 ctaaaaagct ctattttcat agtttttaca agctctaatg ggcaattatc ttttataaat
    17041 ttataagagt gatagtactg agtaatttca aatttagatt ttttatacaa attatcttgc
    17101 tcttcaaaat atataaattc agtattaaga cttttgtttt catagtttga gtctattatt
    17161 aaatcattat ttttatcttt gatatataag cttccgctag ccacgctatc aaaaccgaat
    17221 tgcgtattta gatcaaaaat aagatatccg ccgggtttca acttattgct agcagaacta
    17281 aaaaacttaa acaactcatt ttgagtcata tagtttagca cgtcgctaac tgctgttata
    17341 agatcaaatt ccatatcaag tttgtctata ggacaagcaa gagtttttat gcctttcaag
    17401 ctacaaattt cggccatttt agggctaata tctagcccta aaactttaaa tttagatgac
    17461 aataataaac taaatttccc atttccgcag ccaaaatcaa gagccaaatc accattttca
    17521 aatttaagtg attcaattaa atttagatat tttttataga gctcatcgta agcttcgtaa
    17581 aatcctaaaa gaggttctat ttttgcataa aaatccagac tatctatatt atctttactc
    17641 tttatcgaca agctcttcat taaatttatc ttcataaaat gtactgccta aaaacgcgca
    17701 aatctcttta acgtctctca aagcatttcc aaggcaacta gttgctccag gacttggggt
    17761 catattaaaa ataattcctt ttttagtatt tatactagct tcgccgagca ttaatttttt
    17821 ctcagtttta tttagaactt gaggtcttac tccgccaaaa ccttttgcat aatatatgtc
    17881 gccggtttgt aagctaggaa ctatttttct agcatctttt acgaataatt gtttatttaa
    17941 aagcggaact tcaaataaaa agtttctaag tatataattt cttatttcag agtctttaaa
    18001 taaatcgtaa aatatcttaa ctatatcacc gtctaaattt aaagttttac aaaaatccat
    18061 aaaacttcta tatgttccat gatatctctc aagctttgga agagcaagtg cagttggacc
    18121 aaatctcgta cagccattag ctaaaatatc aggatcgccg tgcaaagccg caaaaggaag
    18181 ttttggattt tgcaccatat aaactttacc gtttaaaagt ttttgtttag taagatagaa
    18241 acttcccgct actggtaaac aaccaaaatc caacccatag cccattttat gggccaaaaa
    18301 tagcgaatgc gctccggcat ttacaacaac gaaatttgcg ctaatagaca gaccgttttt
    18361 ggtttctatg aagaatttat cgccggcttg agttatgttt tgcacctcgc tatttaggta
    18421 taaatcacac tcttttcctt catttctagc attatcaaca aaagtagttg taaaagctcc
    18481 gtaatccaca gtagtatatt caccgctttt aacgcccatt ccaactacgt tttcatttct
    18541 tgcaaaacca tttgcatcat atataatttt cggctctatt tttgacaatt cgtctttatc
    18601 gtaaaattct atataaggat aaagaacttt aaactcttca taacgttttt ttataaattc
    18661 aacttcacta tcgcctacgc ctatagccat cttttgacca tcaaacatat atttgttttg
    18721 gtagccgtgt tgaagaccgt attttacgac cattctggct gtttttctta ctttgctggc
    18781 tttttcaaat gtatagtttg tttctatatc accgcaatgt actgtttgag aatttgccgt
    18841 accttttgag tttaaagttg ctagcccgcc atatttttct attaaaacca tactatttat
    18901 atccgtatat cttgccagtt catatagaag cgctccaccg cttatacctc caccgacaat
    18961 ggcaacttga taatgctttt ctttcatagt ccaactccta gatttattgt tcgattagta
    19021 tatatcattt taatttaaaa aaatttaaaa aaatatcatt aaaaaaattt actcaaaatt
    19081 ctcaattaaa tctttaaata caagatataa agactccacc tcgctttgta aaactctctc
    19141 gtttatggcg tgaattctat cattcactac tccaaactct acaacaggaa ctccaaaagc
    19201 cgcaaaatat ctagcatcgc tagtaccgcc gctagtacta agatcaggtg aaattttgca
    19261 gatattttca atgctttttt gagcctgaat gactatcttt gaactttcat ctgttaaaaa
    19321 cggttttgaa ctctctttta gacttaaagt aaaatcaaat ccattaaaaa tatgctcagt
    19381 atatcttttt atatcttcac aactagttaa ttcagagttt cttacattaa acataatttt
    19441 tacgcttttt ggcgtaacat ttacaacctc catacctcct ctaatatcag taataacaat
    19501 cttgctagca ccaaaatact tactgccgct atcaagttca tatcctgcaa aatcagaaaa
    19561 aacgctagct aattgatgta caggatttac gcatttttca ggataagccg cgtgaccttg
    19621 aactccgttt attgttacga ccccgtttac cgagcctctt cgaccgattt ttatagtatc
    19681 gccaaatgta cttgaagatg tcggctcggc aactaaagca aagtccggta aatttcctct
    19741 gctttttaaa aatttaaggg cttctagagt gccataaata ccgtctccct cttcatcact
    19801 agtaaggatt atactaagag ttccgttaaa tttagtagcg tctttacatg cgcataaaaa
    19861 agccgctact ccgcttttca tatcttgggc gcctcttgca taaacaaaac catcttttaa
    19921 ttcaggttca aaaggatcac tatcccagcc gtctccggca ggcactacgt ctatatgacc
    19981 tgcgaaacat agatgaacgc catctccgaa tttctttgtc aaaataagat tttttatgcc
    20041 atttacatca acgaaatcag catcaaatcc atccataaac atatttataa aattcatagc
    20101 accatcatca tctggagtaa tgcttttaaa tttcaaaagc tcttttaaaa tttctacaac
    20161 ttccatattt agcctttaaa aaatgtgtta aaaagtaaca taatagcaaa aaccgccatt
    20221 aaacaggcag aaaaatatgc aaatattttt gctacgcctt gagaaataaa acgttttgaa
    20281 cgacttaccg caaaaggaag ccccaaaatc caaattccta tagccgctat aagacccgct
    20341 aaacttaaag tcgtgctaga gcttttagca gcaaaactag ataccgatag ccaaaagcct
    20401 attatataag gatttattaa atttaaaaaa gcgcctttta caaagcagcg ggtaaaagag
    20461 ttctctttta aatttaaatc ctgattaatc agtttatcgg cacttttata agttaaatac
    20521 gctatataaa tcaaaaataa agagccgaaa atcgctaata tattaaataa aacgggctgg
    20581 tttaaaattt gcaacacacc aaagctaagt agcacgagat acaaaacatc gacactcata
    20641 gccccaagtc cggtagctac tcctaacttg tatgatttta gagcataaga cattataagt
    20701 atatttatag gacctactgg cacggctgcg ccccatccaa aaaacagtcc ttgaataaaa
    20761 ctctccatca tttttctccg ctaatctata aatttatcgt ttggttctcc aagataaaat
    20821 ccttgaaact catcgactcc tatttctata catcttttaa atatactttc attatataca
    20881 aattcggcta tagttttgat acctaatttt ttagcaaaag caactatagc agaaactaca
    20941 atatatgaat cttcttgtgt gcttacgcgc tttatgatag agccgtctat cttcaagtag
    21001 tccggtttga tttttagtat ataagaaaaa ttactataac cgcttccaaa gtcgtctata
    21061 gctatctttg agcccattct tctaacttta tctataaagc tttttactct atctggatct
    21121 tccatatttt catcttctaa aacctcaaaa actatctgtt tagcaacttg catttcgctt
    21181 aatttttcta ttataaaagc actaacgtcc ccatctatca tatctcctat gcttatattt
    21241 acggatataa caacattagg attaagcttg gcttgtaaaa agcatttttc aatgatagtt
    21301 tttgtaatgt aagcatatct ttttatcagt tttgaatctt ttataaatat accaggcaac
    21361 aaaactccat cttcgttatt tactattcta actagagctt catattttat gacgttttta
    21421 tctttatcga aaataggttg aaaatacgga actacttggt tattcataat cgccttgcta
    21481 attatatgag aatgtctttt gcgccttata tactctttgg tagtatccat ataagtaaaa
    21541 taacaaagat aatctttatg ctcttgttta gctcttttca aagccatcaa agccttttta
    21601 ataggatctt tataatcaag acaaaaacct atactgcagc aaatttctat aagtatattt
    21661 tcaccatatt catcatttat acgtataata tagcctttaa atttatctat caagtcgttt
    21721 gctatagcct catatctatc tatatcaaat tcgctatctt ctaaaagcac aaacttatca
    21781 agtctaaaat tataagcgct aagtccgttt atctttgcaa attcttttat agcggacgat
    21841 acttctatca aaactctatt tgcaatcata tctccgtaat agtcgcttat attgctaaaa
    21901 tcatctatgt ctatgacgat tattcttgga tgctttaagt ccgctatatc tctttcaagc
    21961 ttatatctgc ttggcatatt tgtaagatta tctatgtaaa gctctttttt taaggctcta
    22021 tttttaatct ctaaaagtct atttatacgc ttcatttcta tgttatctag tctcatcgtc
    22081 tttttcagca taaaatagaa cttaagcatt atacaaaccg cagttatcat aaatataact
    22141 cctgcgataa ggctaaaaag catatttgta taaaaccatt ctaaaaactc ttttgaatat
    22201 atagtattta ttttaaaagg catgatcttt tcatacccga tagctctatt ttcatctatt
    22261 ttttcaatat atgaaatttc tactttatta tttaagagta tttttttagc aaaaaacgga
    22321 ttattcgtgt tttttaactt atcttttgca tccgggtact cgcttaaaac atcaaattcg
    22381 ctcaaatcat ttccgaattt atacttagtc tcaaatttag aaccgtttat atctaaaacc
    22441 acacctttta aatacaaaaa atcaagactt ttaagtcttt tatttatact atcttcatca
    22501 tttgcgccat ctatataatt ttttacgaac tcaattgtac ttttgctata tttatagtag
    22561 ttagacgtac cgttcgtatc ataaatttct acgaatttca tataaaaaag ggcgaaattc
    22621 gctattaaaa aaagaaaaat aataagaatt aaaggcgcta ttaaaacctt atttgacatt
    22681 ttatccaaca ttttatttat taaattcctg cattatatct aaaaaaatag gttttatttg
    22741 tgaaaatata caaaacatta taatttcacg accttcgagc caaaaccgcc ctcacttgga
    22801 gtaccgtctt tataggcttt tacgctagga tgggctttta agaactcttt tactgcgtaa
    22861 gcaagttttc cagtaccgat gccatgcttt atcaaaacct cgtcaaatcc cattacaaga
    22921 ctatcggaga taaacttatc aagcctagct atcgcctctt cgcttcttag tccgtgcaga
    22981 tctataacaa cactagcatt tgtaggtttt tgtactttta catttatatt tttttgcgga
    23041 atattaggct gatttccgct tctttttaac aaatttatag gaactcggag cttcaatcca
    23101 tcacttaata tagtcacctc atttttattt aaactaagta tttcgccttt gattttttca
    23161 tattttactc tatctccgat ttttaaattt aaaggttcaa gcgagatttg aggtttttgt
    23221 atattggaaa ctagctcgtt ggctttattt acgcttcttt gcttatcttt tatatctttt
    23281 aaatttattc ctctttttgc ttcgtttatc gctttgtaat actctattt
//
LOCUS       DAPPKW010000016        23274 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.016, whole genome shotgun sequence.
ACCESSION   DAPPKW010000016 DAPPKW010000000
VERSION     DAPPKW010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 23274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23274
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.016"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..1598)
                     /locus_tag="RPW04_000606"
     CDS             complement(<1..1598)
                     /locus_tag="RPW04_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HDX6294721.1"
                     /translation="MKELFRKLDLNDYLEKFNSLLAREKPLFMSGDSKLNYEKLTEIS
                     ILNLKSPNRVANLDDALARLAKQGILHISEIYEFVKIIDYFEYLKKLKFENKMQAYLD
                     KIEIPNQISKICSYFDNEGEFKESIDERLVGINAAFKNKKDEINSELKRLIYTKSIVP
                     YLVDTQIHFINDNEALLVRGGFNHVLKGSVIARSSGGYFYVLPANISKLKIEQRDLLD
                     KKDEIIFEHSKTISSIFSKNLMFLKFINSAFDHVDALIARVMMAKLGDLNFVLSDGSS
                     DIVLNEFAHPALKNPKRVSVSFKGKILLITGVNAGGKSMLLKSILSAAILAKYLLPMS
                     INSQHSKIGSFKEFDTIIEDPQSAKNDISTFAGRMLHFSGLFGKKSLLIGIDEIELGT
                     DFEEAASLYSVMIDKLLENDIKMVITTHHKRLAMLLAKHSDVELLAALYDEVNSRPKY
                     EFLAGTIGKSYAFETAVRYGISSNLVALAKKSYGEDKENLNEVISKTINLEMELKIKL
                     HDANLKEERLNSLLQSLKDQKEKA"
     gene            1800..2330
                     /locus_tag="RPW04_000607"
     CDS             1800..2330
                     /locus_tag="RPW04_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HDX6294722.1"
                     /translation="MANCAINSCTRLDPIDKAGLEALIKAGKENPDVIKTLKCRTVAE
                     GKFRHANYIRNLPAYIVDEPPTLLGEDTAPNPSEAVLAALGSCIAVGIHANAIAQNIV
                     ITKLEVELEGDLNITAVWGTGDLSEKPLGFTDVRVKVDLQSNADKATNEALIAHALKY
                     SPVANTLLRNVNLEVK"
     gene            2348..3412
                     /locus_tag="RPW04_000608"
     CDS             2348..3412
                     /locus_tag="RPW04_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002813310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HDX6294723.1"
                     /translation="MALQKLANLAPRIDAEGIYAKDIINELGTSGYFSVLDQRNDLFK
                     AILNISKVAEICGTTGFCMWCQFALIWYLLNSDNENLKNELLPKLKKAEILGGTALSN
                     SMKAFAGIEKNRLKAARTNGGYIVSGTLAWVSNIEQGSVFGAIALDENKPIMGVIRCD
                     ERVKLGEHIKYSTLEGSATKSVTLKEYFLPDSDILTNDIYSYLIKITPGFILLQAGIA
                     AGIINASLEVIERSNKTHSHINAYLPFSYESLKLELDELLKKVENAAFNINLVSSLEI
                     LQLRLDASLLTQKATNAAVLFSGTKGYFKNAKAARVQREGNFVLIVTPSIKHLLKEID
                     DIKNGSGCIKKWKQFCKVAS"
     gene            3409..4326
                     /locus_tag="RPW04_000609"
     CDS             3409..4326
                     /locus_tag="RPW04_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDX6294724.1"
                     /translation="MTRRYALGFLASFLAFHTSKTLASKLKIPIKVGFLPITDHLIII
                     AKELYKNEKYEIIPIKFSNWADLSEALRSKAIDAAFLLAPLGLMLRASGVKIKAVLAA
                     HKNGSALVARKDISNLEDLKGKNIGIPSRFSTHYYLLDKLLESSNLKNKVNIIDMAPT
                     EMPFALLSGRLDAYIVAEPFGQLAVSKKRAKNLIFSKDIEKSHICCILNFHEEILNLN
                     GFDEVLESFKKAAHFISKNHDEAAVLGGSLLGQNQKIIKNVLDQDIASYDDLSIKKED
                     LERLKEFLIKNDLANEALLSLNIDSYLAV"
     gene            4328..5065
                     /locus_tag="RPW04_000610"
     CDS             4328..5065
                     /locus_tag="RPW04_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDX6294725.1"
                     /translation="MKYFYQILTVFALLVLWQLGSDELIPSPKQSFMALCEIVQKGVL
                     QIGIIDSLYRYFWGLVAGLSGGIFVGFIFGLFPKISMAFDPIINLLRPVSPIAWVPLV
                     LIIFGIGDKPTIFIISYAVFFPVLLLASKAVQDVPKELIIVSKNFGASKWQVLSGVIF
                     PSSFLMLISGLKLAASMAWINLVVGEMLGAQTGLGYLIIDARNQLRIDIVLAVICVIG
                     VVGWVINQLFCLIEKQISRKFGYDKNL"
     gene            5049..5792
                     /locus_tag="RPW04_000611"
     CDS             5049..5792
                     /locus_tag="RPW04_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6294726.1"
                     /translation="MIKISNLKKSFGTTHILDDINLNIEKNEFCVLLGASGSGKTTLL
                     KILSGHSSFDSGEVEMSSVKFKKQIAAHKSRQIITQNYSLMPWMKAIDNIEFALKCSG
                     VKDKNELKKTAKKFLNLVHLGSKESLYPHSLSGGQQQRVAIARALSLNPKVLFLDEPF
                     SALDPITRANLQTELKNIVANSTVIFVTHDIDEALFLGDKIVVLHSGKIIKQLKNPKF
                     QPNSAKYFEIKAEIFRLINGENQEIEYII"
     gene            complement(5789..6805)
                     /locus_tag="RPW04_000612"
     CDS             complement(5789..6805)
                     /locus_tag="RPW04_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HDX6294727.1"
                     /translation="MSSLFKSLKLANFTIPNRITMPPMCVYKSRDLQGLPRCFHRLHY
                     PARSLGGVGFIIVEATAVSPEGCISKNDIGLWSDIQVEAHKKLNYEIKKYSCKVTSVQ
                     LAHAGAKGTCDGIISPSGVRFSGEYGTPDILNTQEIYSIVTKFKEAAIRAKDSDYDLI
                     EIHGAHGYLINQFLSPLTNKREDEFGGNLENRMRFLNLIIEELKDIIPFGVRLSADEW
                     EDGGNTTEDIKIVAKKCEELGASYISVSAGGVVENPTHMPKIKPLYQAQYAKDIKEVI
                     NIPVIAAGLITTKEQGEYLLDNGFCDLVAYGRELLRNPNFALYAAASTGLNDLIDFSY
                     KKAF"
     gene            complement(6809..7150)
                     /locus_tag="RPW04_000613"
     CDS             complement(6809..7150)
                     /locus_tag="RPW04_000613"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294728.1"
                     /translation="MKIILFLVLILFIVLVFASPKDKLSLKSKLIILFCGAALFLAAF
                     IYNEKMQERQDRVQRLLEDFMQEKSIKCGEYEVDSKHFNYEYGTQSFVAKRGFSNLNG
                     VIIPVQKCIKE"
     gene            complement(7147..8445)
                     /locus_tag="RPW04_000614"
     CDS             complement(7147..8445)
                     /locus_tag="RPW04_000614"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDX6294729.1"
                     /translation="MQKVHFIGIGGIGISAIARFLKEKDFIISGSDIKESKTTKNLRN
                     SGMKITVPHCESAIEDPDFVVYSAAIKSDNVELVEARKKGIECLSRKEALPFILEGKR
                     VFAVAGAHGKSTTSAMLAALLEGSVIIGAISKQFGSNMKYESSQNVIFEADESDSSFL
                     NSNPYLAVVTNAEPEHMEHYDFDLDKFHAAYKGFLERAKIRVINAGDEFLASLKMDCI
                     KLYPEDITDLKMVLRNYEPYTSFNLKGLGKFEAWGMGEHIAIDASLAILGANCEIGLE
                     SIRENLKNFKGIKKRFDILVANENFALIDDYGHHPTEICATLKSAKEYAKLLGLEKIT
                     AIFQPHRYTRLKANLEGFKKCFEDVDELVILPVFSAGEASNNIVLKDEFKKAIFAEKV
                     ERKDNSIEFFDSFGVKHRLDSGLVIGFGAGDITYQLRGES"
     gene            complement(8447..9253)
                     /locus_tag="RPW04_000615"
     CDS             complement(8447..9253)
                     /locus_tag="RPW04_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HDX6294730.1"
                     /translation="MAKICVLQLNTLAMSDSRIDYYLKLAKERGAGLVLIGEYVLNSF
                     FTEIIKMPKSMIKEQSEHKRASLLNLAKKYDLIIVAPIILLKGKDIYKVVAKFSPQSV
                     KYEEQNIFIDYSHWNESKFFKSSKKDSLGIMSFAYDKFKFGVMFGYETHFDRLWQEMM
                     SKKIDCVLVPTACTLNSKDRWNELLKMRAFTNNVYILRANRLGKAKFDEVSSEFYGNS
                     MLISPHGEIMDSLDTNEGMLVCELDKKLLNEARSIWKFSQKSSYLQEFKG"
     gene            complement(9246..9443)
                     /gene="xseB"
                     /locus_tag="RPW04_000616"
     CDS             complement(9246..9443)
                     /gene="xseB"
                     /locus_tag="RPW04_000616"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDX6294731.1"
                     /translation="MQIENESFESKIDKLNELLNKLNDENLTLLDSVELYKSGTKLVK
                     EAREMLENAKLSIQEIGGNNG"
     gene            complement(9434..10540)
                     /locus_tag="RPW04_000617"
     CDS             complement(9434..10540)
                     /locus_tag="RPW04_000617"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HDX6294732.1"
                     /translation="MEISTRKAHFDEPLYLESGRILSEFDLVYETYGELNADKSNVIV
                     VCHALTGSHHAAGRYEGDSKAGWWDALIGDNKGIDTTKFFVICVNILGSSFGSTNPLS
                     IEPSTGEEYRLRFPVLVISDVVKAQMRLFDRLGIKQAHAVIGGSLGGMQALCFAIEFP
                     NFAKNVIMLATTYATKAWAIAFNKIAIEGIVRDPDFKNGYYDKDEVLKNGLTGMALGR
                     MAGHISFLSPSSMDDKFGRNYVQTDGLYELLGRFEVDRYMEYNGHNFPKRFDPLSYLY
                     ITKMMNNFDCTRHYNSLKEALSLTKANVLLISFDGDILFPPYLMKEMYDAYCDIGRKN
                     QVKYICINSSYGHDAFLVEVDKIDMYIKKALECR"
     gene            complement(10540..11991)
                     /gene="guaB"
                     /locus_tag="RPW04_000618"
     CDS             complement(10540..11991)
                     /gene="guaB"
                     /locus_tag="RPW04_000618"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDX6294733.1"
                     /translation="MKIIKRALTFEDVLLVPQYSEILPKQVDITSKFSKNINLNIPLV
                     SAAMDTVTEHRTAIMMARLGGIGVIHKNMDIESQVKEVKRVKKSESGVIIDPIFIKPN
                     ATIREALELMSEYRISGVPVVDDDNVLIGILTNRDLRFENDFTKQVSDAMTKPPLITA
                     PKGCTLDDAEKIFSTNKVEKLPIVDESGRLEGLITIKDLKKRKEYPNANKDKFGRLRV
                     AAAMGVGQLDRAVALAKAGVDALVMDSAHGHSKGIIDTLKLIKENVKDVDVIVGNVAN
                     PKAVIDLINAGADGIKVGIGPGSICTTRIVSGVGVPQITAIADCADEAKKFEIPVIAD
                     GGIKYSGDFAKALAAGASCIMVGSLLAGCDESPGELVTFQGRQYKSYRGMGSIGAMTR
                     GSSDRYFQEGTAQDKLVPEGIEGRVPYAGSIKQVVHQLVGGLRSSMGYCGSDSIEIFQ
                     ERAEFVEITSAGLKESHAHDVIITQEAPNYRVN"
     gene            complement(11996..13357)
                     /gene="gatA"
                     /locus_tag="RPW04_000619"
     CDS             complement(11996..13357)
                     /gene="gatA"
                     /locus_tag="RPW04_000619"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HDX6294734.1"
                     /translation="MISLKDAIKLSSSDIVKLRKNLKDKIKDNRQLGAYIEQLTNSDI
                     SDEYAGVPIAIKDNIQVKNWSITSCSKILQGYVAPYHATVVEKLLKAGLAPFGRTNMD
                     EFAMGSTTESSFYGKTLNPLDHTRVPGGSSGGSAAAVSAGLAIAALGSDTGGSIRQPA
                     AFCGCVGFKPTYGRVSRYGLGAYSSSLDQIGPITRSVEDAALLYDIIAGHDPKDSTSS
                     NLENISTSDKLNSDRKLTIAVIKNYVDGASQDVKDSLYKVVDKLKEAGHNIIYKDLSN
                     SKYDIAAYYIIATAEASANLSRYDGVRYGRRADSNSLGQMYSKTRGEGFGVEVQRRML
                     LGTFVLSSGYYDAYYIKAQKARAFIKLEYEEILNEADIMLMPVAPSVAYKFGELSDPL
                     SAYLSDIYTIGVNLAGLPAITVPVQSDKNGLNISAQLIGGAWKEQDVLDAAFGLEKLV
                     KGN"
     gene            complement(13457..16207)
                     /gene="ileS"
                     /locus_tag="RPW04_000620"
     CDS             complement(13457..16207)
                     /gene="ileS"
                     /locus_tag="RPW04_000620"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002858461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDX6294735.1"
                     /translation="MDYKDTLLLPTTDFAMRGNLPECEPARYAKWDEQKVYEKMKAKR
                     EKSAISFNIHDGPPYANGHLHIGHALNKILKDIILKTHYFFGQGIRYTPGWDCHGLPI
                     EQQVEVKLGDKKKSMSKSDIRQECRNWAKEFITVQKDEFKSLGVIGDWNDPYLTMKFK
                     FEANIYRTLCEVAKKGLLVERSKPVFWSWAARSALAEAEVEYEDKEDYSLYVAFCLSD
                     AACKKLGVSDAKAVIWTTTPWTLVANQAISLNPNEKYALTSEGYIIALPLKETLINQG
                     IINGKILKEFASSELEGLSAINPLNGRDSRFILGEHVLMDGGTGLVHTAPGHGEDDYF
                     ASLKYGIEVIMPVDEAGLYDETLRVKKLLPEHLLNEFIGLHIFKANEKLIELLGDAAV
                     KVSKFVHSYPFCWRTHKPVIYRATKQWFIAMDEPKLSGKTLRQTALEALKSVKFYPEV
                     GVKRISSMIENRPDWCISRQRDWGVPIAFFRDSATKEPIFDSRVLEHVAKVFDEKGSD
                     AWWNLEISELLPKGTNLDPSKLEKVTDILDVWFDSGSTWNAVLNSGDYDAGGYQADMY
                     LEGSDQHRGWFQSSLLLSCAINQKAPYKSVLTHGFTVDGNGNKMSKSKGNVIAPSDVA
                     KRYGVEILRLWVGLSDYSSDLKISDDILKQVAEQYRKIRNTIRFLLANINDLDDISSH
                     FGTLDKWILARATKSFKEVSECFKNYEYSKGFNILLNFLSTDLSGIYLDICKDRLYCD
                     EKDGLRRRSSQSAMAIIAKSLLSLIAPTLTYTVDEAIEFAPDIIKNGAKDAFDLVYEP
                     LVFEFKIDDELLTSSREKFNEIIDVLKKDKIIKSTLEVILETSSNEILANDLDEIIDW
                     YMVSFVRNIESDEFLAEFAVGNDKFKIVKADRYKCPRCWKYAAKIDNDLCPRCAKVLK
                     RV"
     gene            16326..16940
                     /locus_tag="RPW04_000621"
     CDS             16326..16940
                     /locus_tag="RPW04_000621"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294736.1"
                     /translation="MIKKIAIILSASLVYASEFQSDFLKQNGDSLILKPFEIKNQISS
                     EVLEAKQSKIISPNFELNNDNFDLKSIDLLSIDSLNFNNPYLDKFKLNIDNKIDKKDK
                     NYFSNNSMGIEYATSFANFDIKTKLNATYEKDIKNSTITPNIEISKEIFDKTKVGAVI
                     NQKNGEYSNVPYIDLSLNKNMSFNVSYDDFENSQNIYTKFKIIY"
     gene            16957..18048
                     /locus_tag="RPW04_000622"
     CDS             16957..18048
                     /locus_tag="RPW04_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HDX6294737.1"
                     /translation="MRHIIIIVGEELQINKPFLDYVFSSYESHFGELGMVYYIQNSDK
                     ELPFYIENHSKNFDFITIIANDSNFYTLSKILATLTTDTIELKDETLIPSRAQIYTKD
                     SFLLDLNSASINLIKAEPTKKLPQILINIDLESQFFNILDIDKESARILLEPLATTYN
                     VNISLTELLSGLTYVRAGANKYGQIKGFIDSASNLFANKIINDKSIVSFIAKKLIQKN
                     QKITFAESCTAGLCASKIGSVPGVSSAFDGSVITYANHIKHNWIDVENSILETFGAVS
                     KECVEQMCFGALKLCECDYAIAISGIAGPDGGSKEKPVGTVFVAVANKNGDVQTSRLL
                     LEGDRDYIREQSALHAYALLLRANPSLFI"
     gene            complement(18077..20962)
                     /locus_tag="RPW04_000623"
     CDS             complement(18077..20962)
                     /locus_tag="RPW04_000623"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294738.1"
                     /translation="MKNIFLVFIFILFGNSELFGINSVYCNETSKDAYLKEGSTVLLE
                     NFKSNTNADGTNKQEILEITDGNTHTYELFVDDISANYLLNIWDQASLRIKPNSNSKV
                     SVKITEVKTASSVTIDNSYVHFRFLKPDYADEIAVDTDKNYGGVCYKKRLEQFDKSAG
                     NLYSGTKEKDEFYTFVKSNDTVNILFEIDQALAKSKLLTPSLNKYKFKATITITPIVP
                     SPDYSSNKLMVVNDQYNVKASGAVNAAGDFTGDTNLYTQLVGRSFNVQVISTIDQADI
                     RQFHYAGLFSELDNMKIVPIDCTYLSLLMPTSPYDGCKKEMDDLPLYFKFANALTGMR
                     GASPTNPISYNLNDFTISANRTDINYNKLFFEIQGYYNITNSNIKIRSNYFSVRPAAL
                     VLQTANLSNELFGGEKYEASVDGNDMYTKVTAVDGSNNAAKSYNTKFISKGMIFLDRS
                     AGGTKNDKTWCSYDGSEDDDKKLSNVPMVTTAKFDKGVGKVYTDYEAANNKYYIKYPD
                     IGHTKIYILDDTTTQIDQMEGDCIKGSASNDKVNGKIGCNVALEADYFKFKPTKFQIT
                     KKELKNGYISDDGNITFFAFGKDYSMSETDYTDFMGGKFELDIQARLADDNVPNLYSK
                     NCYANDIDINFELDKTEDEKKALENAKNNVSFYGIADRTLGPDQNETYLIKIVNSDAS
                     GAQKNDGKFKLAKNSFYAGESNVSLKINFDREYNSTKNPLRIKSNDFKISGKDSIYKN
                     SAINDITVLADDKNRVVDYFYGRVYADDTDIKETENVIYDLNDMYYGVYCSDECKAKQ
                     GVDEEYEFVKDTINTTDDTTNTNYAGISGLDNYYRVKYFNKLNSDIDLFAKLESTPQN
                     TGPNLEIYNDLGVLDERGTINASQWKMKLKYSETDPENIFIISMKTPYYMIFDKDYIG
                     GEPKYSSFKVKFIRNSKTKWVGFGDEGDVMGIEKQNELIKSKSRIDW"
     gene            complement(20999..22156)
                     /locus_tag="RPW04_000624"
     CDS             complement(20999..22156)
                     /locus_tag="RPW04_000624"
                     /inference="COORDINATES: protein
                     motif:HMM:TIGR00254.1,HMM:TIGR02481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDX6294739.1"
                     /translation="MDYNKSIFAWSKKFETNLDKIDDQHHHLVNLINNLSKKLSNSNL
                     SKNELIGLFTELFGYAKYHFHDEEQLMAENKLNSEFVKDHVFNHKLFIEEVGILFAGL
                     QSDDEDDQENLDKTAKYILNFLINWLAFHILGQDKKMARQIEMVKSGIASKKAYNMVR
                     NKASAEEIQPLVRTLNKLLEMMSKRNKDLVIVNNELLELKKDLENKVQDRTKELIEAN
                     ENLEKLSMTDQLTEMPNRRHAMKTLDLLWKENLDSDRGLSVLMIDLDYFKEVNDNYGH
                     DAGDYILRLVARTLKESVRTDDIVCRLGGDEFLVICPNTMLEGSIQVANNLLKDIHSL
                     KVKTKNCEWNGSASIGLACMSPDIKNYSKLIKLADDKVYEAKQSGKNCFMY"
     gene            complement(22277..22351)
                     /locus_tag="RPW04_000625"
     tRNA            complement(22277..22351)
                     /locus_tag="RPW04_000625"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22316..22318),aa:Glu,seq:ctc)
     gene            complement(22373..22448)
                     /locus_tag="RPW04_000626"
     tRNA            complement(22373..22448)
                     /locus_tag="RPW04_000626"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22413..22415),aa:Lys,seq:ctt)
     gene            complement(22486..22562)
                     /locus_tag="RPW04_000627"
     tRNA            complement(22486..22562)
                     /locus_tag="RPW04_000627"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22526..22528),aa:Asp,seq:gtc)
     gene            complement(22574..22649)
                     /locus_tag="RPW04_000628"
     tRNA            complement(22574..22649)
                     /locus_tag="RPW04_000628"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22614..22616),aa:Val,seq:tac)
     gene            complement(22662..22738)
                     /locus_tag="RPW04_000629"
     tRNA            complement(22662..22738)
                     /locus_tag="RPW04_000629"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22701..22703),aa:Glu,seq:ctc)
     gene            complement(22758..22833)
                     /locus_tag="RPW04_000630"
     tRNA            complement(22758..22833)
                     /locus_tag="RPW04_000630"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22798..22800),aa:Lys,seq:ttt)
     gene            complement(22845..22921)
                     /locus_tag="RPW04_000631"
     tRNA            complement(22845..22921)
                     /locus_tag="RPW04_000631"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22885..22887),aa:Asp,seq:gtc)
     gene            complement(22933..23008)
                     /locus_tag="RPW04_000632"
     tRNA            complement(22933..23008)
                     /locus_tag="RPW04_000632"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22973..22975),aa:Val,seq:tac)
     gene            complement(23023..23098)
                     /locus_tag="RPW04_000633"
     tRNA            complement(23023..23098)
                     /locus_tag="RPW04_000633"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(23063..23065),aa:Lys,seq:ttt)
BASE COUNT         7296 a         4678 c         3598 g         7702 t
ORIGIN      
        1 tctgctttct ctttttgatc ttttaaactt tgtaaaagcg agttcaatct ctcctctttt
       61 aaatttgcat catgcaattt gatttttaat tccatttcta aatttatggt cttagaaata
      121 acttcattta aattttcttt atcttcccca taagactttt tagctaatgc tactaaattt
      181 gaagatattc catagcgaac cgctgtttca aaagcatagg atttgcctat agttccagct
      241 aaaaactcat acttcggacg agagtttact tcatcataaa gtgcagctag aagctctaca
      301 tcgctatgtt ttgcaagcag catcgcaaga cgtttatggt gagttgttat gaccattttg
      361 atatcatttt cgagcagttt atctatcata acgctataaa gactagcagc ctcttcaaaa
      421 tcagttccca gctctatctc atcgatgcct ataagaagag attttttacc aaaaagtccg
      481 ctaaaatgca acattcttcc tgcaaacgta gatatatcgt ttttagcgct ttgcggatct
      541 tctataattg tatcaaactc tttaaaagaa ccgattttgc tgtgctgcga atttatactc
      601 ataggaagta gatattttgc taaaatagct gcactaagta tactttttaa tagcatactt
      661 tttccaccgg cgttcactcc tgttatgagc aaaattttgc ctttaaaact cacgctaact
      721 cgtttaggat ttttaagtgc gggatgagca aattcattta aaacgatatc actacttccg
      781 tcgcttaaaa caaaatttaa atcgcctagt tttgccatca taactctagc tataagagca
      841 tcaacatggt caaaagcaga gtttataaat tttaaaaaca taagattttt gctaaaaata
      901 gagcttattg ttttcgaatg ttcaaatata atctcatctt ttttatcaag caaatcacgc
      961 tgctcgattt ttagttttga gatatttgcc ggaagcacgt aaaaatatcc accgctactt
     1021 ctagctataa cgctgccttt taaaacatgg ttaaatccgc cgcgaaccaa aagagcttca
     1081 ttatcgttta taaagtgaat ttgagtatcg acgagatatg gaacaatact ttttgtataa
     1141 ataagccttt ttaattcgct atttatctcg tcttttttgt ttttaaaagc cgcatttata
     1201 ccgactaaac gctcatcaat gctctcttta aactcgcctt cgttatcaaa atacgaacaa
     1261 attttagata tttgattagg aatttctatc ttatctagat aagcttgcat cttattttca
     1321 aatttaagct tctttaagta ttcaaaatag tctattatct taacaaattc ataaatctca
     1381 ctgatatgca agataccttg ctttgcgagc ctagcaagcg catcatcaag atttgccact
     1441 ctatttggcg actttaaatt taaaatagat atttcagtta atttttcgta attcaacttg
     1501 ctgtctccgc tcataaaaag cggtttttct ctagctaaaa gcgagttaaa tttctctaaa
     1561 taatcattta aatctaactt tctaaatagt tctttcatta aaatttccaa attattaatc
     1621 atttttttac tgattatttt atcataaaaa tacttatgaa gctttgtgta gcatatactt
     1681 tatatttata ttataaaata tagtatttaa ctttatattg acaagatatg attttactgt
     1741 tataatttca gtataaaaaa gatagtatat cttttaaata tattaataaa ggacacaaaa
     1801 tggcaaattg cgctatcaat tcttgtacaa gactagaccc tatagataag gccggtcttg
     1861 aagctcttat caaagccgga aaagaaaatc cggatgttat aaaaacgctt aaatgtcgca
     1921 cggttgcaga aggtaagttt cgccacgcaa actacataag aaatctacca gcatacatag
     1981 tagacgagcc gcctacttta cttggagaag acactgcgcc aaatcctagc gaagctgttt
     2041 tagctgctct tggaagttgt atagccgtag gaattcacgc aaacgcgata gcgcaaaaca
     2101 tagttataac aaaacttgaa gtagagcttg aaggcgatct aaatataact gcagtttggg
     2161 gaacggggga tttaagcgaa aaacctcttg gatttaccga tgttagagta aaagttgatc
     2221 tacaaagtaa tgcagacaaa gccacaaacg aagctcttat cgctcacgct cttaagtatt
     2281 cgcctgttgc aaatactctg cttagaaacg taaatttaga agttaaataa atttaaaagg
     2341 attgaaaatg gcactacaaa aattagcaaa ccttgcacct cgcatcgacg cggagggaat
     2401 ttatgcgaaa gatatcataa atgaactcgg aactagcgga tattttagcg ttttagatca
     2461 aagaaatgat ctatttaaag ctatactaaa catatctaaa gtagctgaaa tttgcgggac
     2521 gaccggattt tgcatgtggt gccaatttgc gcttatctgg tatctgctaa atagcgacaa
     2581 cgaaaacctt aaaaacgaac ttttaccaaa attaaaaaaa gctgaaattt taggcggaac
     2641 cgcactatca aattctatga aagcatttgc cggtatagaa aaaaaccggc taaaagcggc
     2701 aagaactaac ggcggatata tcgtgagcgg aactcttgct tgggtgtcaa atatcgagca
     2761 aggaagcgta tttggagcta tagctttaga tgaaaacaag cctataatgg gagttataag
     2821 gtgtgatgag agagtaaaac tcggcgaaca tataaaatac agcacgcttg agggctcagc
     2881 aacaaaatca gtaaccctaa aagagtactt tttgcctgat agcgatatct taacaaacga
     2941 tatctatagc tatttgatca agatcactcc tggatttatc ttgcttcaag caggaattgc
     3001 agctggtatc ataaatgcga gtttagaagt aatagagcgc tcaaacaaga ctcactctca
     3061 tataaacgcg tatttacctt ttagctatga gagtttaaaa cttgagcttg acgaactact
     3121 aaaaaaagtt gaaaatgcgg cttttaatat aaatttagta agctcgcttg aaattttaca
     3181 actaagactt gacgcgtcgc ttttaacaca aaaagcgaca aacgcagcgg ttttatttag
     3241 cggaaccaaa ggatatttta aaaacgcaaa agccgccaga gtgcaacgag agggaaattt
     3301 cgtgcttata gtaactccta gcataaaaca tcttttaaaa gagatagacg acataaaaaa
     3361 cggtagcggc tgcataaaaa aatggaagca gttttgtaag gtcgcatcat gacaaggaga
     3421 tacgcacttg gatttttggc gagttttttg gcatttcaca catcaaaaac tctagcgagt
     3481 aaacttaaaa ttcctataaa agtaggattt ttgcctataa cagatcatct tattatcata
     3541 gcaaaagagc tttacaaaaa cgaaaaatat gagattattc cgattaaatt ttcaaactgg
     3601 gctgatctta gcgaagcgtt aaggagcaaa gcgatagacg cagcgttttt gttagctccg
     3661 ctaggactta tgctaagagc aagcggagtg aagataaaag ccgtccttgc agctcataaa
     3721 aacggttcgg cgctcgtagc aagaaaagat atatcaaatt tggaagactt aaaaggtaaa
     3781 aatataggaa ttccctctcg ttttagtacg cattattatt tactagataa acttttggaa
     3841 agttcaaatt taaaaaacaa ggtaaatatc atagatatgg cgcctaccga gatgcctttt
     3901 gctctgctta gcggaaggct tgacgcgtac atagtcgccg agccttttgg tcagctagcc
     3961 gtatctaaaa aaagagctaa aaatttgatt ttcagtaaag atatagaaaa atctcatata
     4021 tgctgtattc taaactttca cgaagagata ctaaatttaa acggctttga tgaagtatta
     4081 gaaagcttta aaaaagctgc tcattttata tctaaaaacc atgatgaagc agctgtttta
     4141 ggcggatccc tactaggaca aaaccaaaaa attataaaaa atgtgctaga tcaggatata
     4201 gcttcttatg atgatttgag tattaaaaaa gaggatttag agcgtcttaa agagttttta
     4261 ataaaaaatg atctagcaaa cgaagctctt ttaagcttaa acatcgatag ctatctggcg
     4321 gtataaaatg aaatattttt atcaaatttt aaccgttttt gccctgcttg tattatggca
     4381 gcttggaagc gacgagctta taccatcacc aaaacagagc tttatggctc tatgcgagat
     4441 agtgcaaaaa ggcgtacttc aaataggcat tatagactca ctttaccgct atttttgggg
     4501 actagtcgct ggacttagcg gcggaatttt cgtaggattt atttttggat tatttccaaa
     4561 aataagcatg gcttttgatc ctatcataaa cttactgcgc ccagtatcgc ccatagcttg
     4621 ggtaccgctg gttctcatca tttttggtat aggagataaa cctactatat ttatcatatc
     4681 ttacgcagtg ttttttccgg tacttttact agcttcaaaa gcagtgcaag acgtcccaaa
     4741 agagctaata atcgtatcaa aaaactttgg cgcttcaaag tggcaagtgc ttagcggagt
     4801 gatatttccc tctagttttc ttatgcttat atccgggctt aaattagccg cttcaatggc
     4861 ttggataaac ttagtcgtag gcgaaatgct aggagcacaa acaggacttg gatatctcat
     4921 catagatgct agaaatcagc ttcgaataga catagtttta gccgtgatct gcgtcatagg
     4981 cgtagtgggc tgggtgataa atcagctgtt ttgtttgata gaaaaacaaa tttcaagaaa
     5041 gtttggatat gataaaaatc tctaatctaa aaaaatcgtt cggaactacg catattttgg
     5101 atgatataaa tttaaatata gaaaaaaacg aattttgcgt gttgcttgga gctagcggtt
     5161 ctggaaagac tactttgctt aagattttaa gcggtcatag ctcttttgat agcggtgaag
     5221 tagaaatgag cagcgtcaaa tttaaaaaac agatcgccgc tcataaatcc cgtcagatca
     5281 taacccaaaa ctactcttta atgccgtgga tgaaggcaat tgacaatatc gaatttgctc
     5341 taaaatgttc aggcgtaaaa gacaaaaacg agcttaaaaa gacagctaaa aagttcttaa
     5401 atttagtgca tttgggtagc aaagagagcc tttacccgca ctcattaagc ggcggtcagc
     5461 aacaacgagt cgccatagca agagctctta gcctaaatcc caaagtgcta tttttagacg
     5521 aaccgttttc tgctcttgat cctataacca gagcaaattt acaaaccgaa cttaaaaata
     5581 tagtcgcgaa ctccactgtg atatttgtaa ctcacgatat agatgaagcg ctgtttttag
     5641 gagataaaat agtagtttta catagtggaa agattataaa acagcttaaa aatccaaaat
     5701 ttcagccaaa ctccgcgaag tattttgaga tcaaagctga aatttttaga cttataaatg
     5761 gtgaaaacca agaaatagaa tatattatct aaaacgcttt tttataagag aaatctataa
     5821 gatcatttag ccctgtgctt gcagctgcat atagggcaaa attcggattt cttaaaagct
     5881 ctctgccata agctactaaa tcacaaaatc cattatccaa aagatattct ccttgctctt
     5941 ttgtagttat aagcccggct gcgatgactg gtatatttat aacttctttg atatctttag
     6001 cgtattgcgc ttgataaagc ggttttattt ttggcatatg agtaggattt tctactactc
     6061 cgccggctga aacgctgata taactagctc ctaactcttc gcattttttt gctactattt
     6121 ttatatcctc agtagtattg ccgccatctt cccactcgtc ggcgctaagt cttacaccaa
     6181 acggaatgat atcttttaac tcttctataa ttaaatttaa aaatctcatt ctattttcta
     6241 aattcccgcc aaactcatct tctcttttat ttgtaagcgg acttaaaaac tgatttatta
     6301 gataaccgtg agccccgtga atctcgatta aatcataatc tgaatcttta gctctaatag
     6361 ctgcttcttt aaatttagtc actatagagt aaatttcttg agtattcaaa atatcaggag
     6421 tgccgtactc accgctaaat ctaacgccgc tagggcttat tataccatcg caagttcctt
     6481 tagcacctgc gtgagccaac tgcacgctag ttactttaca actgtatttt ttaatctcat
     6541 agtttaattt tttatgagct tccacttgta tatcgctcca aagtcctata tcgtttttgc
     6601 ttatacagcc ctcaggagaa accgcagtgg cttcaactat gataaatcca acaccgccaa
     6661 gggatcttgc tggataatga agcctatgaa agcatctcgg aagtccttga aggtctctac
     6721 ttttatatac acacatcgga ggcattgtga tacgatttgg aatcgtaaaa ttagctaact
     6781 ttaatgattt aaacagactt gacataactt actcctttat gcatttttga acaggaatta
     6841 taactccgtt caaatttgaa aatcctcttt ttgctacaaa actctgagtg ccgtactcat
     6901 aattaaaatg tttactatcg acttcgtatt caccgcattt tatgcttttt tcttgcataa
     6961 aatcctcaag taaacgctga actcgatctt gtctttcttg cattttttca ttatatataa
     7021 atgcagctaa aaacagcgct gcgccgcaaa atagtataat aagtttcgat tttaagctta
     7081 atttatcttt tggagatgca aaaactaata caataaataa aataagtact aaaaaaagaa
     7141 ttattttcat gattcacccc ttaactgata cgttatatct ccagcgccaa accctattac
     7201 taatccgctg tctaacctat gctttactcc aaaactatca aaaaactcta tagaattatc
     7261 ttttcgttca actttttcgg caaaaatcgc ctttttaaat tcatctttca aaactatatt
     7321 atttgaagcc tcgcccgcac taaaaacagg taaaatcaca agctcatcta catcttcaaa
     7381 acatttttta aatccttcta aatttgcttt tagtctagta taacgatgag gctgaaatat
     7441 agcggtgatt ttttctaatc cgagtaattt tgcatactct tttgcgcttt ttagagttgc
     7501 acagatctct gttggatggt gaccgtaatc atctatgaga gcaaaatttt catttgcaac
     7561 caatatatca aaacgttttt taatcccttt aaaattcttc aaattttccc taatactctc
     7621 aagtcctatc tcgcaatttg ccccaagtat agcaaggcta gcgtctatag ctatatgttc
     7681 gcccattccc catgcttcaa atttgccaag gccttttaaa ttaaaactag tatatggctc
     7741 atagtttctt aaaaccattt taagatcagt tatatcttct ggataaagtt ttatacaatc
     7801 catttttaaa gatgccaaaa actcatcacc cgcatttata actcgaattt tagcacgctc
     7861 taaaaatcct ttgtatgcgg cgtgaaattt atccaaatca aaatcgtaat gttccatatg
     7921 ttccggttcg gcattcgtaa ctactgctaa atacggattt gagtttaaaa aactactatc
     7981 gctctcatcg gcttcaaata taacattttg acttgactcg tatttcatat ttgagccaaa
     8041 ctgtttgctt atagctccta tgataacgct accttctaaa agagccgcaa gcatagccga
     8101 agtcgtactt ttaccgtgag ctccggctac tgcaaacact ctttttcctt ctaatataaa
     8161 aggaagtgct tcttttctag ataagcattc tatacctttt tttctggcct cgacaagctc
     8221 aacgttatca ctttttatag cagccgaata tactacaaaa tcaggatctt ctatcgcact
     8281 ttcacaatga ggaacagtga ttttcatacc gctatttctt aaatttttag ttgttttact
     8341 ctcttttata tcagaaccgc ttataataaa atctttctct ttcaaaaatc tagcgatagc
     8401 agaaattcct ataccgccga tacctataaa gtgaactttt tgcattttat cccttaaatt
     8461 cttgtaaata gctggatttt tgactaaatt tccaaatact cctagcttca tttaagagtt
     8521 ttttatctaa ttcgcaaacc aacattcctt cattcgtatc aagactatcc atgatctctc
     8581 cgtgcggact aattagcata gagtttccat aaaactctga actaacctca tcaaatttag
     8641 ccttaccaag tctatttgcc cttaaaatat atacgttatt cgtaaaagct ctcattttta
     8701 acagctcgtt ccatctgtct tttgagttta aagtgcaagc agtaggcaca agcacgcaat
     8761 cgatcttctt agacatcatc tcttgccaaa gcctatcaaa gtgtgtttca taaccaaaca
     8821 taactccaaa tttgaactta tcgtaagcaa aactcataat acccaaacta tcttttttac
     8881 tgcttttaaa aaatttactt tcattccaat gagaataatc tataaaaata ttttgctctt
     8941 cgtacttcac gctttgaggg ctaaatttag ctacaacttt atatatatct ttacctttta
     9001 aaagaataat cggagcaact atgatgagat cgtatttttt tgctaaattt aaaagagaag
     9061 ctcttttgtg ttcgctctgc tcttttatca tggatttagg cattttgatt atttcggtaa
     9121 aaaatgagtt caaaacatac tcaccgatca gcactagtcc tgcaccgcgc tctttagcca
     9181 actttaaata gtaatctatc ctagagtcgc tcatggcaag agtatttagc tgaagcacgc
     9241 atattttagc cattatttcc acctatttct tgtatgctaa gcttagcatt ttccaacatt
     9301 tctctagctt cttttactaa ttttgtaccg cttttgtata attcaacact atctaaaaga
     9361 gtcaaattct catcatttag cttgtttaaa agctcattta acttatctat cttactctca
     9421 aaactctcat tttctatctg cattcaagcg ccttttttat gtacatatct attttatcca
     9481 cctcgactaa aaatgcatcg tgcccgtaac tgctatttat acatatatat ttaacttgat
     9541 tttttctacc tatatcgcaa tacgcatcat acatttcttt cataagatat ggcggaaaca
     9601 aaatatctcc atcaaaagat attaacaaaa cgttagcttt tgtaagactc aaggcctctt
     9661 ttaagctatt ataatgacga gtacaatcga aattattcat cattttagtt atataaagat
     9721 agctcaaagg atcaaatctt tttggaaaat tatgtccgtt atactccata tacctatcta
     9781 cttcaaatct acctaaaagt tcataaagac cgtctgtttg tacgtaattt cgcccaaatt
     9841 tatcatccat agaactagga cttaaaaaac ttatatgacc tgccattcta ccgagcgcca
     9901 ttccggtaag tccgtttttt aacacttcat ctttatcata gtatccgttt ttaaaatccg
     9961 gatctcttac tatgccttcg atggctatct tattaaaagc aatagcccac gcttttgtag
    10021 cataagtagt agccaacatt ataacgtttt tagcgaaatt tggaaactct atagcaaaac
    10081 aaagtgcttg cataccgcca aggcttccgc ctatgactgc gtgagcttgc tttataccaa
    10141 gcctatcaaa tagcctcatc tgtgctttta ctacatcact tatcactaaa acaggaaacc
    10201 ttaaacgata ctcctctcct gtgctaggct ctatactaag cggatttgta gaaccgaatg
    10261 agcttcctaa aatatttacg catataacaa aaaatttagt agtatctata cctttattat
    10321 cgcctataag agcgtcccac cagccggcct tactatcgcc ctcatatctt ccggctgcgt
    10381 gatgacttcc ggttaaagcg tgacatacta ctatcacgtt tgatttgtcg gcgtttagct
    10441 caccgtaagt ttcataaact aaatcaaact cgcttaatat acgaccgctt tctaaataca
    10501 gcggttcgtc aaaatgagct ttacgagtac taatttccac taattaactc tataatttgg
    10561 tgcttcttga gttattataa catcgtgcgc gtgactctct ttgagtccgg cgcttgttat
    10621 ctctacaaac tcggctcttt cttggaaaat ttcgatactg tcgcttccgc aatatcccat
    10681 agagcttcta agtcctccaa ctaactgatg aactacttgt tttatgcttc cggcgtatgg
    10741 aaccctaccc tctatacctt ctggtaccag tttatcttga gcagttcctt cttgaaaata
    10801 cctatcgcta ctacctcttg tcatagctcc tatgctaccc ataccacggt agcttttata
    10861 ctgtctgcct tgaaaagtaa ctagctctcc tgggctttca tcgcaacctg caagtaagct
    10921 tcctaccatt atacaactgg ctccggccgc taatgctttt gcgaaatctc cgctatattt
    10981 gataccgcca tcagctatta ctggtatttc aaatttttta gcttcatcag cgcagtccgc
    11041 tatagcagta atttgaggaa cgcctacacc agatactata cgagttgtac atatagatcc
    11101 aggacctata cctactttta ttccatcggc tccggcgttt ataagatcga taacggcttt
    11161 tggatttgct acgtttccta ctatcacatc aacatcttta acattttctt taatgagctt
    11221 taaagtatct attatacctt ttgaatgacc gtgagctgag tccataacca aagcatcaac
    11281 acctgccttg gctaaagcca cggctctatc aagctgacct acgcccatag cggccgctac
    11341 tcttagacga ccgaatttat ctttatttgc atttggatat tcttttctct ttttaagatc
    11401 ttttatggtg atcagtcctt cgagtctgcc actttcatct actataggaa gcttctcaac
    11461 tttatttgta gaaaatatct tttccgcatc atccaaagta caaccttttg gcgcagtgat
    11521 aagaggcggc tttgtcattg catcgcttac ttgtttagta aaatcatttt caaatctcaa
    11581 atctcgattt gtaagaattc ctatcaaaac attatcatca tcaactacgg gaactcctga
    11641 tatcctatat tcactcataa gttcaagagc ctctcttata gtagcgtttg gttttataaa
    11701 tataggatca attataactc cgctttcgct ttttttaacc ctttttacct cttttacttg
    11761 gctttctata tccatatttt tatgtataac gccgatgcct cctagccttg ccatcataat
    11821 agcggttcta tgctcagtta ccgtatccat agcagcagat acaagaggta tatttaaatt
    11881 tatattttta ctaaatttag aggttatatc aacttgtttt ggtaaaattt ctgaatactg
    11941 cggtacaagt aaaacatctt caaaagtcaa agctctttta attatcttca tctctttagt
    12001 ttcctttaac taatttttcc aaaccaaatg cagcgtctaa gacatcttgt tctttccacg
    12061 caccgccgat gagctgagct gagatattta gcccattttt atcactttgc accggtactg
    12121 ttatagcagg aagtccggcc aaatttacac ctatagtata tatatcgcta agatacgcac
    12181 taagcggatc gcttaactct ccaaatttat aagctacact aggagctact ggcattagca
    12241 ttatatcggc ttcatttaat atctcctcat attctagttt tataaatgct cttgcttttt
    12301 gtgcttttat ataataagca tcatagtatc cgctacttaa aacaaatgtt ccaagaagca
    12361 ttcttctttg cacttctaca ccaaatccct cgcctcttgt ttttgaatac atctgcccaa
    12421 gagagtttga gtccgctctc ctaccatatc taacaccgtc ataacgacta agattcgcac
    12481 tagcttctgc tgtagctata atataataag cagctatatc gtattttgag ttagaaagat
    12541 ctttataaat tatgttatga ccggcttctt ttagcttatc aactacctta taaagcgagt
    12601 ccttaacatc ttggctagcc ccatcaacat agttttttat aactgctatc gtaagttttc
    12661 tatcgctgtt taatttatcc gaggtgctta tattttctaa atttgagctt gtgctatctt
    12721 ttggatcatg tccggctata atatcataaa gaagtgcggc atcttcaacg cttcttgtta
    12781 tcggtcctat ctggtctaag ctactagaat aagctccaag tccatatctg ctaactcttc
    12841 cgtaagtagg cttaaagccg acgcatccgc aaaacgcagc aggttggcgt atgcttcctc
    12901 cagtatcgct tcccaaagca gctatcgcta gtccagccga aactgctgca gcgctaccgc
    12961 cactactgcc tcctggaact ctagtatgat caagcggatt taaagttttg ccgtaaaacg
    13021 aactttcagt tgtgcttccc atggcaaact catccatatt cgtacgacca aacggtgcaa
    13081 gtccggcttt caaaagcttt tctacgaccg tagcgtgata tggagctacg taaccttgca
    13141 agatcttaga acaacttgtt atgctccaat ttttgacttg aatattgtct tttatagcga
    13201 ttggaacacc tgcatactca tcacttatat cgctattagt tagctgttct atataagcgc
    13261 ctaattgtct attatctttt atcttatctt ttaaattttt acgaagcttt actatatcgc
    13321 tactacttag ctttatcgca tcttttaagc ttatcacctg ttctccttaa atctattaac
    13381 taaaaatatg ccgacactta ccataccgac taatatagcg acggtaagta ctattagctc
    13441 catacttact ggttcactaa acacgtttta acaccttagc gcatcttggg cataaatcat
    13501 tgtctatttt agcagcatat ttccagcatc tcgggcattt atatctatct gcttttacta
    13561 ttttaaattt atcattaccc actgcaaact cagccaaaaa ctcatcactt tcgatatttc
    13621 ttacaaagct aaccatatac cagtcgatta tctcatcaag atcatttgct aaaatctcat
    13681 ttgagctagt ttctagtata acttctaacg tggatttgat tattttatct ttttttagaa
    13741 cgtctattat ttcgttaaat ttctcacggc tggaagtaag aagctcatca tctattttaa
    13801 attcaaacac aagcggctca taaactagat caaacgcgtc ttttgctcca tttttaatga
    13861 tatctggagc aaactctata gcctcatcta ccgtatatgt aagagtagga gctataaggc
    13921 ttagcagaga ttttgctatt atagccatag ccgattgaga tgagcggcgt cttaaaccgt
    13981 ctttttcgtc acagtaaagt ctatctttac agatatcaag ataaattcca ctaagatccg
    14041 tacttaagaa atttaataat atattaaaac cttttgaata ctcatagttt ttaaagcact
    14101 cagatacctc tttaaaactc ttagtagcac gagcaagtat ccacttatca agagttccga
    14161 aatggctgct tatatcatcc aaatcattta tattcgctag taaaaatctt attgtatttc
    14221 ttatttttct atactgctcg gcaacttgtt ttagtatatc atcgctgatt ttaagatcgc
    14281 ttgaataatc gcttaatcct acccaaagac gcaaaatttc aactccgtat ctcttagcaa
    14341 catctgaagg agctataacg tttcctttgc ttttgctcat tttattgccg tttccatcaa
    14401 cagtaaaccc atgtgtcaaa acacttttat aaggggcttt ttgatttata gcgcaactta
    14461 aaagaagaga gctttgaaac cagcctctat gctggtcgct tccctcgaga tacatatcgg
    14521 cttgataccc tccggcgtcg taatctccgc tatttaaaac cgcgttccaa gtagatccgc
    14581 tatcaaacca aacgtccaaa atatccgtta ctttttctag cttcgaggga tctaaattcg
    14641 tccctttagg caataactcc gaaatttcta aattccacca cgcatcgctg cctttttcgt
    14701 caaatacctt agctacgtgc tctaaaacgc ggctatcaaa aataggctct ttcgtagcgg
    14761 aatctctaaa aaaagctatc ggaacgcccc agtctctttg gcgagaaata caccagtcgg
    14821 ggcgattttc tatcatcgag cttatacgct taactccgac ctccggataa aactttacgc
    14881 tctttaacgc ctcaagcgcc gtctgcctta gagttttgcc gcttagctta ggctcgtcca
    14941 tagctataaa ccactgtttc gtagcgcggt agatcaccgg tttatgcgtt ctccagcaaa
    15001 acggatagct atgcacgaat ttgctaacct ttacggccgc gtcgcccaaa agctctatta
    15061 atttttcatt tgctttaaat atatgaagcc ctataaactc atttaaaaga tgctcgggaa
    15121 gtagcttttt aacccttaaa gtctcatcat aaagccctgc ttcatcaaca ggcattataa
    15181 cctctatacc gtatttcaaa cttgcaaaat aatcatcttc gccgtgccca ggagcagtat
    15241 gcactagtcc agttccgcca tccatcaaaa catgttcccc aagtataaac cgagaatctc
    15301 tgccgtttaa aggattaata gcgcttaaac cctcaagctc acttgaagca aactctttta
    15361 aaatttttcc atttatgata ccttgattta taagagtttc ttttaaagga agagctatta
    15421 tataaccttc gcttgttagg gcgtattttt cattcggatt taaactaatg gcttgatttg
    15481 ctactaaagt ccacggagta gtagtccaaa taacagcttt tgcgtcacta actcctagct
    15541 ttttacaagc agcgtcgctt aagcaaaaag caacatacaa gctataatcc tctttatctt
    15601 cgtactctac ttcggcttcg gctagagcgc ttctagcagc ccaactccaa aaaacaggtt
    15661 tgcttcgctc aacaagaagc ccttttttag ctacttcgca aagagttctg taaatatttg
    15721 cttcaaattt aaatttcata gtaagatacg gatcattcca gtcgcctatc acgccaagag
    15781 acttaaactc atctttttga acagttataa actccttagc ccagtttctg cactcttgtc
    15841 tgatatctga cttactcata ctcttttttt tatcgccgag ctttacttct acttgctgtt
    15901 cgataggaag accatgacaa tcccaacccg gagtatatct tataccttga ccaaaaaagt
    15961 agtgtgtttt tagaattata tcttttaaaa ttttatttag cgcatgccct atatgaaggt
    16021 gtccgtttgc atatggcgga ccatcgtgga tattaaaact aatagcggat ttctcccttt
    16081 tagctttcat tttttcatag actttttgct catcccattt tgcgtaccgt gccggctcac
    16141 actcaggaag attgcctctc atagcaaaat ccgtcgtcgg cagcaacagt gtatctttat
    16201 agtccatcta acaaccttaa atttttaaat ttatggattt tatcaaaaat ttcataaaac
    16261 taagatttat cttggtagaa tatgataaaa taataaaacc atttagcaaa ggagaaaaag
    16321 tcaaaatgat aaaaaaaatc gccataattt taagcgcatc tcttgtatat gcaagcgaat
    16381 ttcaaagtga ctttttaaag caaaatggag atagcttaat cctaaaacct tttgaaatca
    16441 aaaatcaaat cagcagtgaa gtattagaag caaaacagag taaaataata tcgccgaatt
    16501 ttgaactaaa taacgataat ttcgatctta aaagcataga tttgcttagt atcgactctt
    16561 taaattttaa taatccgtat ctggataaat ttaaactcaa catagacaat aagatagata
    16621 aaaaagataa aaattacttt tcaaataact ccatgggcat agaatacgca acttcttttg
    16681 caaactttga tataaaaacc aaactcaacg caacatatga aaaagatatc aaaaatagca
    16741 caataacgcc aaatatagaa ataagcaaag aaattttcga caaaacaaaa gttggagccg
    16801 tcataaatca aaaaaatgga gagtatagca atgttccata tatcgatcta tcgttaaaca
    16861 aaaatatgag tttcaacgtt tcgtatgatg attttgaaaa ttcacaaaat atctatacta
    16921 aatttaaaat tatatactaa acattaggag gtttaaatga gacatatcat cataatagta
    16981 ggcgaagaat tacagataaa caagcctttt ttagactatg tttttagtag ctacgaatca
    17041 cattttggtg agcttggaat ggtatattac atacaaaata gcgataaaga actgccgttt
    17101 tatatagaaa atcactctaa aaacttcgat tttataacca taatagcaaa cgatagcaac
    17161 ttttatactt taagcaaaat tctagccact cttactaccg acactataga attaaaagat
    17221 gaaactctga ttccatcaag agcacaaatt tatacaaaag atagcttttt gctggattta
    17281 aactcggctt ctataaatct cataaaagca gaaccgacaa aaaaacttcc tcaaattctt
    17341 ataaatatag acttagaatc tcaatttttc aatattttag atatagacaa agagagcgct
    17401 aggatacttt tagaaccgct tgcgacaact tataatgtaa atatcagtct tactgagtta
    17461 ctatctggtc ttacttacgt gagagctgga gcaaataaat acggtcagat aaaaggtttt
    17521 atcgatagcg cttcaaattt atttgcaaat aaaatcataa acgacaaaag catagtatct
    17581 tttatagcaa aaaaactaat acaaaaaaat caaaaaatta cctttgcaga atcctgcacg
    17641 gctgggcttt gtgcctcaaa gataggctcc gtaccaggag taagcagcgc atttgacggt
    17701 tcggtgataa cttatgcaaa tcacataaaa cataattgga tagatgtaga aaatagcata
    17761 ttagaaacat ttggagcagt aagcaaagag tgtgtggaac agatgtgttt tggagcatta
    17821 aaactttgcg aatgcgatta tgctatagct ataagcggta tcgcaggtcc tgatggagga
    17881 agcaaagaaa aaccagtagg cactgtattt gtcgcagtag caaataaaaa cggcgacgta
    17941 caaacctcaa gactgctttt agaaggcgat agagactata taagagagca aagcgctttg
    18001 cacgcttacg ctttactgct tagagcaaat ccgtctttat ttatttaaat ttaaagcaac
    18061 cgagcagaat acacttttac caatctattc tgctttttga ttttattagt tcattctgct
    18121 tttctatacc cataacatcg ccttcatcgc caaaacctac ccatttagtt ttagaatttc
    18181 ttataaattt tactttaaaa ctactatatt taggctctcc tcctatgtag tctttatcaa
    18241 atatcatata gtatggtgtt ttcatagata taataaatat attttccgga tcagtttcac
    18301 tatatttcag tttcatcttc cattggcttg cgtttatggt gccacgctca tctaagacgc
    18361 caagatcatt atatatttct aagttaggac ccgtgttttg aggtgtcgat tctaatttag
    18421 caaacagatc gatatcggag tttagtttgt taaaatactt tactctatag taattgtcca
    18481 aaccgcttat tcccgcgtaa ttcgtatttg tcgtatcgtc tgtggtattt atcgtatctt
    18541 ttacgaactc gtattcctcg tctacgcctt gcttggcttt acactcatca ctgcaatata
    18601 ctccgtagta catatcattc aaatcataaa taacattttc ggtttctttg atatccgtgt
    18661 catctgcata aactcttccg tagaaataat ccacaactct atttttatca tcggctaaaa
    18721 cagtgatatc attaattgca ctatttttgt aaatactatc tttaccgctg attttaaaat
    18781 cgtttgattt gattcgcaaa ggatttttag tcgaattata ctctctatca aaatttatct
    18841 ttaagctaac atttgattct ccggcgtaaa aagagttttt agcaagttta aatttgccgt
    18901 cgtttttctg cgccccacta gcatctgagt ttacaatttt tattagatat gtttcatttt
    18961 gatccggtcc caaagtccta tctgctatac cgtaaaaact cacattgttt ttagcatttt
    19021 caagagcttt cttttcatct tcggttttat caagttcaaa atttatatct atatcgtttg
    19081 catagcagtt tttactatac aagttaggca cgttatcatc agctagtcta gcttgtatat
    19141 caagctcgaa cttgcctccc ataaaatcag tatagtcagt ctcactcata ctataatcct
    19201 tgccaaatgc aaaaaacgtt atatttccat catcgcttat atagccattt ttaagctctt
    19261 ttttagttat ttgaaatttt gtcggtttaa atttaaaata atccgcttct aaagcaacgt
    19321 tgcagcctat ttttccattt actttgtcat ttgaagcgct gccctttatg cagtcgcctt
    19381 ccatctgatc tatctgagtc gtagtgtcgt ctaaaatata tatcttagta tgtccgatat
    19441 caggatactt gatataatac ttattattcg cagcttcata gtccgtatat acttttccta
    19501 ctcctttatc aaatttagca gtagttacca taggtacgtt tgaaagtttt ttgtcgtcat
    19561 cctcacttcc gtcatacgag caccatgttt tatcattttt cgtacctccg gcgctcctat
    19621 ctaggaaaat catacctttt gatataaatt tagtgttgta agacttagct gcattatttg
    19681 atccatctac tgcagtaacc ttagtataca tatcatttcc atctacggac gcttcatact
    19741 tttcaccgcc gaataattca tttgataaat ttgcagtttg taaaactaac gcagcaggtc
    19801 taacgctgaa atagtttgat cttattttga tatttgagtt ggtaatatta taataacctt
    19861 gaatttcaaa aaatagctta ttgtagttta tatcggttct attcgcagaa atagtaaaat
    19921 catttaaatt ataacttata ggatttgtcg gactagctcc tcgcatacca gttaaagcat
    19981 tagcaaattt aaaatataaa ggtagatcat ccatttcctt tttacaccca tcataaggcg
    20041 atgttggcat taataaagac aaatatgtgc aatctatagg aacgattttc atattatcca
    20101 gctcagaaaa taaacctgca taatgaaatt gtcttatatc tgcttgatca atagtactta
    20161 taacttgcac attaaaagat ctacccacta actgagtata taaatttgta tctccggtaa
    20221 aatctccggc tgcattaacg gctccggacg cttttacgtt gtattgatca ttaactacca
    20281 ttagtttatt actactataa tctggtgagg gtactatcgg ggttatggtt atggttgctt
    20341 tgaatttata tttattaaga gaaggtgtga gcaatttact ttttgcaagc gcttgatcta
    20401 tctcaaaaag tatatttacc gtatcattgg attttacaaa agtgtaaaac tcatcttttt
    20461 cttttgttcc gctatataaa tttcctgcag acttatcaaa ctgttctaat ctctttttat
    20521 agcatactcc accatagttt ttatcggtat ctacggctat ttcatcggcg taatcaggct
    20581 ttaaaaatct aaaatgaaca tagctattat caatagtaac ggagcttgct gtttttacct
    20641 cggtgatctt tactgaaact ttactgttag aatttggttt tatcctaagt gaagcttgat
    20701 cccagatatt aagaagataa ttagccgata tatcatctac aaaaagttca taagtgtgag
    20761 tatttccgtc cgtaatctct aaaatctctt gtttgttagt tccgtcggca tttgtattac
    20821 ttttaaaatt ttctaataaa acagtagaac cctcttttag atatgcgtct tttgaggttt
    20881 cattacaata tacactgtta ataccaaaca gctccgaatt cccaaaaagt ataaaaataa
    20941 acactaaaaa tatatttttc acaaaaccgc ctttctgcat aaatccacta atgccgtgtt
    21001 aatacataaa acagttttta cccgactgtt ttgcttcata tactttatca tcggcaagtt
    21061 ttataagttt gctataattt tttatatcag gagacataca ggccaatccg atactagcgc
    21121 ttccgttcca ctcacagttt ttagttttga cttttaaact gtgtatatct tttagcagat
    21181 tatttgcaac ttgaatagag ccttctagca tagtatttgg acaaatcact aaaaactcat
    21241 ctccgccgag tctgcaaact atatcatcag tacgaaccga ctctttaaga gttctagcta
    21301 ctaatcttaa tatataatcc cccgcatcat gaccgtaatt atcatttact tctttaaaat
    21361 aatccaaatc tatcatcaaa acagacaaac ctctatcgct atctaaattc tctttccata
    21421 acaaatcaag ggttttcata gcgtggcgtc tatttggcat ctctgtaagc tgatctgtca
    21481 tagaaagctt ttctaaattt tcatttgctt cgataagctc ttttgttcta tcttgtactt
    21541 tattttcaag atcttttttt aactcaagta gttcattatt tactattact aagtctttgt
    21601 ttcgtttaga catcatttct aaaagtttat ttaaagttct tacaagaggc tggatttctt
    21661 ctgctgaagc tttatttcgt accatattat aagctttttt agaagcaata ccgcttttca
    21721 ccatttcaat ctgtctagcc atttttttat cttgtccaag aatgtgaaaa gcaagccaat
    21781 taattaaaaa atttaaaata tatttagccg ttttatctaa attttcttga tcatcttcat
    21841 catcgctttg caatcctgca aataaaattc caacttcttc tataaacaat ttatgattaa
    21901 atacatgatc ttttacaaac tcggaattaa gcttattttc cgccataagc tgctcttcat
    21961 cgtgaaaatg gtatttagca tagccaaaaa gctcagtaaa tagccctatt aattcatttt
    22021 tgctcagatt gctatttgaa agttttttac ttaaattatt tataagattg actaaatgat
    22081 gatgttgatc gtctatttta tctaagtttg tttcgaattt tttactccag gcaaatatag
    22141 acttattata atccattatc aacactccta aatatagcat aaccaaccat ttttatattg
    22201 tatataaaat aaatataaaa ataccttaaa aagcatataa atgaaatata aagtatgcaa
    22261 ggagtatata gaaatatggt gacccctacg agactcgaac tcgtgttccc aacgtgagag
    22321 gctggtgtcc taaccgctag acgaaggggc cgaataataa aaaataacac agtggtgccc
    22381 cgtgtagggc tcgaacctac gaccccatca ttaagagtga catgctctac caactgagct
    22441 aacgaggcaa catcataatg gcgcgtatgc gtcgaaatat aaaaatggcg cggcggacgg
    22501 gactcgaacc cgcgacctcc ggcgtgacag gccgatattc taaccagctg aactaccgcc
    22561 gcaacctaaa taatggtggt cgctataaga ctcgaactta tgacatccac cttgtaaggg
    22621 tggcgctcta ccaactgagc taagcgacca aaaaaaataa atggcgaccc ttgtaagatt
    22681 tgaactcacg tttttgcaca gagagtgcaa cgtcctgggc caactagacg aaagggtcta
    22741 aaccctactt aaaaaagtgg tgtcccgcgt tggattcgaa ccaacggcca cctccttaaa
    22801 agggagatgc tctacctact gagctagcga gacaaacagt aaaatggcgc ggcggacggg
    22861 actcgaaccc gcgacctccg gcgtgacagg ccgatattct aaccagctga actaccgccg
    22921 caacctaaat aatggtggtc gctataagac tcgaacttat gacatccacc ttgtaagggt
    22981 ggcgctctac caactgagct aagcgaccaa aaaaataata aatggtgtcc cgcgttggat
    23041 tcgaaccaac ggccacctcc ttaaaaggga gatgctctac ctactgagct agcgagacaa
    23101 tataaatatt tttgatgtga aatctttaat caaagaaaat aacaacactt caaaaaggaa
    23161 gtgaaattat acaaaaatta actttgtttg tcaagtaaaa atcatatatt ttagtgattt
    23221 atagcatata aaattgtaaa atagctatat tttgaaacat tatcatccct tttt
//
LOCUS       DAPPKW010000017        21890 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.017, whole genome shotgun sequence.
ACCESSION   DAPPKW010000017 DAPPKW010000000
VERSION     DAPPKW010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21890)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21890)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21890
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.017"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..826
                     /locus_tag="RPW04_000634"
     CDS             <1..826
                     /locus_tag="RPW04_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDX6294740.1"
                     /translation="DSKSQTQKTSDKTAQKNKTQTSVAAKTAKKEDDKKSQTQNKNTI
                     KNIPRNKTIVLDAGHGGKDAGAVGSRTLYEKNVVLKVALKAGKILKNRGYKVYYTRDK
                     DKFIGLRNRTSFANDKMADLFISIHANAAPNSKKAPEMQGIETFFLSPTRSERSMRAA
                     NLENKSDTDEMNYFTKISFLNFLNREKIIASNKLAIDIQTNLLSSVRTNYNVSDGGVR
                     EAPFWVLVGALMPAVLIETGYITHPKEGKLLANDAYADKLAEGIANGIDDYFAKNR"
     gene            823..2661
                     /gene="mnmC"
                     /locus_tag="RPW04_000635"
     CDS             823..2661
                     /gene="mnmC"
                     /locus_tag="RPW04_000635"
                     /inference="COORDINATES: protein motif:HMM:NF002481.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HDX6294741.1"
                     /translation="MITFRGDGLYNSKFDDIYFNTNEPLIECEHTYSSVLDEINAKFI
                     VVAEAGFGTGLNFFSTVLKFLSLNSTELHYIAVEKYPFKKSELREIYLKFEILKPFFD
                     EFIEQYEILDGALIRIKLLNERVILDLYFGDILDAFDELSFRADAWYLDGFSPTKNPD
                     MWSKEVFDRLSKFCKNRAKVRTFSSAKIVQNRFLEHGFNIKKLKGHYKKREILEASLE
                     HSSPKILKEPWYALPNISKFSDVLIIGAGVAGLAAAFKFKKAGFNVCIAEKMSEAATN
                     GSSNLAGILMPLITKPKVALGNMHMSAFLFARHFYANSPFADFCGVYDYGVNDLEKTR
                     LSLWDSEIFKFENDFEPYPRAFIKSAAQIRPKELCMSLASEFDIKYGYEFESIEKSTG
                     GYVVKFKNSKNIFSSLVIFAMGDASTNLFQNVFADEFMQLSSVRGQVTHLNKVLNLNS
                     AFSARGYMCKDVRGIQVVGATYDRNDNRSAARATDDEKNIDSLSEFITNLDVKVVGSN
                     VGFRGYSGDRFPIVGAVHNASEFKKIYKSLLWTKHSKNNEFAVHHENILISSAHGSRG
                     LGTAIFGAEILLDIALNRPVCTTNSILNSLNPARFLVRKLKRGLVR"
     gene            complement(2708..3631)
                     /locus_tag="RPW04_000636"
     CDS             complement(2708..3631)
                     /locus_tag="RPW04_000636"
                     /inference="COORDINATES: protein motif:HMM:NF024242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDX6294742.1"
                     /translation="MNKFILDNSDISRINKSIQIDQNKANISTKIVEISKDIGLHINN
                     FIIYEDNAANYDSDFKGVTINITFSADHYYKSTVCDFYLAPKAGRTLINYFYMDKGVI
                     HYKANTQIKNVIITIKNEFLEKYLDKNITTKIQNTDSSKIIQNRATYAKTAFCASEIY
                     KFINQKQINALFIKAKILEILSYELTNLNLNLKESLNLSKFDILSLNKAMEILKNDYK
                     NPPSITELSKKVRLNQCKLKQGFKTLFRTTPYSVHMDTKMQKAKEFIEKGELSLNQIS
                     KELGYKQPHNFTTAFKKYFGLNPSNFTKTVS"
     gene            3733..5799
                     /locus_tag="RPW04_000637"
     CDS             3733..5799
                     /locus_tag="RPW04_000637"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012801.1,HMM:NF019335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDX6294743.1"
                     /translation="MYKKITILLSLVLASSLYAGTKLDDVIVSANRSAQKLDDISKSV
                     SVIDGDTIKRRQSTNLTGIIADEPGISYAPDGMSSGQIILRGFSTQNFRAPLFVDGNR
                     FRGRNTLEYMLFDPNQIERIEIIRGPASSLYGTDSFGGVVNVITKRATGDVQAPFNIT
                     DTYISSEYQSVNHAIANRFQLGGVGDGFDILLGINYKDGDNYGTKEGVIPNSDYLYRG
                     FDLKVGYSFLDTNRVELTARYTKVNRGRAAGQFASPGAGNAPGVLQRQMREEPMREKY
                     LALGYSAQMQNGSLEASLYRRELYTHINVIPNLNSPQKWVDNYVIGPVVYGGKSIVAY
                     SGESLSQTYGIDWYYESRDGSEQSVNGKNRIKSAPNSTQLNIGVFGLLEYGFEGGTLL
                     SASLRHDYFKTGLETSFIKNNEIKKLFESAGDTSTNKTTSGFGMIYPLFGGLDFVLNI
                     NSSFRAPSVTEITAVGDGVSGVFTLPNSSIKPETGLSYETGLKYKDGLIISNLTAFTS
                     SYKNLIVTRNITYKNTPARQLQNVGESSISGIEFDIAYKLLSNLIFKTNASYLYGEDK
                     TSHKPLPQIMPLNGFISLMYEPKSIKKSYIEYTTQWASNKTRTDNLSERERSGYAVSN
                     LYFGKEFGNMGAFKSVELNFGIENIFYKKYSMPSVPEDIRYPVSKTNPLLNPGRNFKI
                     GLRASF"
     gene            5808..6407
                     /locus_tag="RPW04_000638"
     CDS             5808..6407
                     /locus_tag="RPW04_000638"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294744.1"
                     /translation="MKDILFIGAKPSQLSNFESLDEFKRVECVSQYSIEDMDFNRYNG
                     ILMTIYLDQYLIKKLSFKFENFLNLGGRVFYNGHIILPFLKELKEFKPIQNPKFTDFF
                     IMQCIYHKIYDQIDIEKLNTRKGVAGFYSRGQNPPPLNADIITSISSGNVPVDWEIEV
                     GNGKFYSHCGNDLYTCGENYEINSKILKNIISYLGDRYE"
     gene            6400..7020
                     /locus_tag="RPW04_000639"
     CDS             6400..7020
                     /locus_tag="RPW04_000639"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294745.1"
                     /translation="MNSIAALDSGTPYHIVSLHKKPFNKFFSKVIYIPELQIDDLHDV
                     DILIVTCASSIEKILEHKNIFYEFLKAGKTLVVMGRNDAELWLHDVKLSKFPFNFWWW
                     LDKKNNSIDIEVSNADYELFKYINFNDMIWHYHDGYEPMNGAISVIEHKIQKKTIFLD
                     NKDYYGGRLILTSLDPFYHHGSFFMPNATKFAEAFLRYLSKMELYK"
     gene            7017..8060
                     /locus_tag="RPW04_000640"
     CDS             7017..8060
                     /locus_tag="RPW04_000640"
                     /inference="COORDINATES: protein motif:HMM:NF013648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDX6294746.1"
                     /translation="MKKIFVVLFVLLVFLFSQEIEFSDERGNLIKLEKPASRVISFPI
                     PLASFSISVDNNADKLVSIHPLAKIAIQNGILGRIFPKTLDLQTNAVGSNFVPNVEEV
                     IRLKPDIVFQWAHMSQKIVEPLQKIGINLVLLDYGDEKNAINWFKIIGKAYDLEHKVE
                     TILKNRSFVENQITTSLKNIRNRPKVLYFLRYKQAFLVSGKQTYQDYNIKLAGGINVA
                     SHIGQKTVNLEQILLYNPDIVLLNNFEQDLSPEDIYSNKFLKHINAVKNRAVYKIPFG
                     GERWDPPSQESHLSWIWLNKIFYGKSSLNLKKEMMNSYNIFYNYNLNDSEILSILHYE
                     KNKNSRYYEDILE"
     gene            8065..9021
                     /locus_tag="RPW04_000641"
     CDS             8065..9021
                     /locus_tag="RPW04_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDX6294747.1"
                     /translation="MKKYAVVLTALIAIAGFSLLVGRISLSELLYSSQNEFFDMILFE
                     IRLPRLIAAFFIGASLSVAGAAFQAIFQNPLVGPNILGVTSGAGFGAVVFILFFNEPF
                     LVQIGAFVFGFIAVLMAYFIGNISNKNSKLMLVLAGIIVGALFGALIAIVKYLADPND
                     KLPNIIYWLMGSLNFTSWSDLLFLLPISLVGLFLLCSFSYKVNILSLSSDHARFLGES
                     RMLSLSIIILSTLVVSSSVAVSGIIGWVGLLVPHIVRMIFGANNLVVLPMSALIGGGY
                     LILVDTVARSATQSEIPLSILTALIGAPLVGFIIIKKANQWF"
     gene            9012..9785
                     /locus_tag="RPW04_000642"
     CDS             9012..9785
                     /locus_tag="RPW04_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6294748.1"
                     /translation="MVLNVNNLSFSYADDLILNRVSFDILKGETVSILGKNGIGKSTL
                     LKILLSLQSYSSGEIFIDGVNIRSINLKHRARFLGYVPQAENSTFAFLVKDIILMGRN
                     AHLGLFQRPSKYDLDYVLEAADIVGITNLLSKNIYELSGGEKQLVLIARALCLFPKLL
                     IMDEPISYLDVFHQNKILSLINLLNTKYNISVLFTSHYPDHTLAISHKTLLLNGANGA
                     IFGESKDILTDVNLKNLFGISFFGLKINEKDRLLPKWNI"
     gene            9873..10406
                     /locus_tag="RPW04_000643"
     CDS             9873..10406
                     /locus_tag="RPW04_000643"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294749.1"
                     /translation="MHWLDKEIVVVEIDGRFFALNGWDGECYSRCWECGDRRGDKFHK
                     VVGVDTYKITPRFGDEFVLEKNPLIGTMDDIKEQMYKSLLPYMGQANTISGEILRAIQ
                     FIEHSITKNTDISGALKFLSLNLDDDSCLILIDEIRNNDFENFSVLKQKVENIVLKQY
                     ENNELEINYDDFEDMND"
     gene            10455..10898
                     /locus_tag="RPW04_000644"
     CDS             10455..10898
                     /locus_tag="RPW04_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDX6294750.1"
                     /translation="MKIVEIKDRNSVLIERLVNVWEDSLRVTHLFLSDPEIENIKKYV
                     PKALYDVSNLIILKDEKGNIQAFMGIEGQKLDMLFVSSKEQNKGFGKKLICYGINNYS
                     INEVCVNEQNPIAKRFYEYMGFRVYKRSDIDEQGNPYPILYMRLA"
     gene            complement(10960..11478)
                     /gene="ppa"
                     /locus_tag="RPW04_000645"
     CDS             complement(10960..11478)
                     /gene="ppa"
                     /locus_tag="RPW04_000645"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HDX6294751.1"
                     /translation="MDISKIKFGSNPDKLNAVIEIPFGSNIKYEIDKDSGAVVVDRVL
                     YSAMFYPANYGFVPNTLADDGDPADILVLNEYPLQAGSVIPCRLIGVLVMEDEAGMDE
                     KLLAVPVTKIDPRYADIHSISDLSEATLNRIKNFFETYKLLEPGKWVKVKGFEDAKKA
                     EEILDKAIKNYK"
     gene            complement(11483..12058)
                     /locus_tag="RPW04_000646"
     CDS             complement(11483..12058)
                     /locus_tag="RPW04_000646"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDX6294752.1"
                     /translation="MKKLFLIIGAPGSGKTTDASMIAANDDKFAHYSTGDLLRAEVAS
                     GSELGKLIDSFISKGNLVPLEVVVNTIISAIRSSDKNYILIDGYPRSEEQMRELDRVL
                     ASQSEVKLDGVIEVDVSEEVARNRVLGRARGADDNNEVFNNRMKVYLDPIKEIRAFYN
                     DKKILHMINGERTIETIVADMKNLIENLIKG"
     gene            complement(12055..13809)
                     /gene="aspS"
                     /locus_tag="RPW04_000647"
     CDS             complement(12055..13809)
                     /gene="aspS"
                     /locus_tag="RPW04_000647"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDX6294753.1"
                     /translation="MRSHYCTDLSSNDIGKKVQLCGWVNSYRDHGGVIFIDLRDRTGI
                     IQLVCDPKDSKSAHEIGSKVRDEYVLKATGTIRARGEGLINPKLKTGEIEVIVDELYI
                     ENESAALPFVIGDPNVGEDIRLKYRFLDLRNTESFDKFKLRSKASIACRNALDRLGFL
                     EVETPILTRATPEGARDYLVPSRVYPGSFYALPQSPQLFKQLLMCAGFDKYFQIARCF
                     RDEDLRADRQPEFTQIDVEMSFCTQEDVIKVGEEILKDIFYACGHDIITPFRRMEYKD
                     AMETYGNDKPDLRFDLPMVDVIDIFAKSNNEIFSTPAQNIKKNRAKAIKVPGGDNIFS
                     KRQMQRFEEFVRKFGAKGLAFIQVKEDGLKGPLVKFFEQEQIDELIKRCELKVGDVVF
                     FGIGDKKTVLDYMGRFRAFLANELGIIDENKLEFLWVVNFPMFEQNDDGSYSAMHHPF
                     TMPNNPDEEDLEDITSIAYDVVLNGVELGGGSIRIHKNDIQQKVFKLLKIDEAEQREK
                     FGFLLDALSFGAPPHGGFAIGLDRLIMLVTKSASIRDVIAFPKTQRASCPMTKAPSNV
                     SNEQLRELGLRLKGKETK"
     gene            13985..14851
                     /locus_tag="RPW04_000648"
     CDS             13985..14851
                     /locus_tag="RPW04_000648"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011992056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HDX6294754.1"
                     /translation="MMIEIHKNLKAVGILTRNAIDQKDAINTLKKILEKYEVSVLLEH
                     HIAAELNEVGCSLDEMLKNTNLIISVGGDGNFISTCRKCASSGVFVFGVHTGHLGFLT
                     DVTLNQCDKFFEEFFRGCYEIEKPYMLEAKFKKDDKIMEKLAFNDIVLMRRKIDSTSN
                     IEAFLNSKYFNSYFGDGVIISSAMGSTAYNMSAGGAIIYPLCDVFSLTPVCSHSLTQR
                     PLILPKEFKVEFKSCDDVVVLIDGQDRVDLKNYTSVEVGISDVRVNLIRHKDRDYFEI
                     LKQKLRWGHNDK"
     gene            14841..16364
                     /locus_tag="RPW04_000649"
     CDS             14841..16364
                     /locus_tag="RPW04_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004319583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDX6294755.1"
                     /translation="MISRVYIKNYLGFSELELNFGSGLSVFTGVSGAGKSVLMGAILS
                     VFGFKDSEAKLIEADVEYDFCADEFGIETADINTFKLLKDKSTRYFINNQSISKKNLS
                     LIAGSHLKYLSAKEIGEFENSRLISVLDGLASKNDKNFVLNLKNFTTKFEEFILIKKE
                     LEKVLEEEKKVDELKEFASFEIQKISSINPQIGEFDELIATKKKLSKKDKIEAAWQKA
                     DAIFNYEKAVLDALEISDIDGTFFSDALNELKIARSSVSFDEFDDINIEEILDRIENL
                     NGLIKRYGSIEEAIDVLNTKKAELAHYEKIEFEKSELEFKFKKLHSEVLNLASSISKA
                     RNEQITQFAMILNGYLKELYMDMVSVKLSQKELGNDGIDAVEISLNSSNLKTLSSGEI
                     NRLRLAFIASEAKITGFGNGVLILDEIDSNLSGKEAMSIADVLLELAKFYQIFAISHQ
                     PQLSSKAHHHFLVEKNGENSFARELDANDRIKELSRMISGEVISEEAREFAKTLLNI"
     gene            16430..17677
                     /locus_tag="RPW04_000650"
     CDS             16430..17677
                     /locus_tag="RPW04_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HDX6294756.1"
                     /translation="MKERVLIVDDNKALARLIAKKMENNVDMDIVVAHTFNEARDIVD
                     DNDDFFIALLDLNLPDAPNGEIVDYIISKNILVIVLTGSIDSATKDIFMNKNIVDYVV
                     KSNMNNIDYIFDSINRLSKNRYYKVMVVDDSTPMRNKIKQILLSQQFKVFAAAHGEEA
                     MSYLADNPDIKLVLTDYNMPVMDGFELMGHIREKYSKNDLSVIAITGDGKDADTGAKF
                     LKNGANDFIVKPFSKEELVCRVNNSIEFMENIKFMAKLANTDFLSGAYSRRYFYMDMK
                     EYYKNCSDQSFAVAMFDIDDFKKINDKFGHDIGDIIIQKLSSFLIGWISEGDLVARFG
                     GEEFCVVLKNINFDDAVKKAVSIRAKIASSLINIKGFDIKFTVSIGVTNGDFSKNIDH
                     IISKADEALYNAKIAGKNRVEIL"
     gene            17674..18438
                     /locus_tag="RPW04_000651"
     CDS             17674..18438
                     /locus_tag="RPW04_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDX6294757.1"
                     /translation="MIIDTHCHLDDERYDEDLDAVLENAFKNGIKKIIIPGADINDLP
                     KACKIANSYENLYFSVGVHPYEVDGYDKSRLESFANDDKCVAVGECGLDYFRLPESGV
                     LEYKNRQKEVFIDQIKLACELKKPLIVHIRDANEDSLNILKEYQNDLVGGVLHCYNAS
                     PILLELSDKFYYGIGGVLTFKNGKKLVEILPKIPKNRLIIETDGPYLSPEPHRGSRNE
                     PVFTNYVAQKMADILNLKKEEVEEMTTKNAQKLFNI"
     gene            18447..19661
                     /locus_tag="RPW04_000652"
     CDS             18447..19661
                     /locus_tag="RPW04_000652"
                     /inference="COORDINATES: protein
                     motif:HMM:NF013618.1,HMM:NF013630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDX6294758.1"
                     /translation="MRFFIAILLCFLTYSSAFGFIQTRDDYSAQLRILKELDIDPKYM
                     KDPHFLAMKAERSNIAKKDFVNTIKEEYKHISMLKELISKTDMPKSFLYLAMVESGLS
                     NKAVSNVKAVGMWQFMEGTAKLYGLRVDKYVDERRDPVASTLAAVQYLKRLKDQFGKW
                     YLAIMAYNSGEVRVKQAIQKAGTDELSVLIDPDKKYLSLETRLFIRKILLAANIAEDS
                     DFIISNDSSMLNRPNQISVSKVFVPGGTSLAMVASSIGLSLKKLKEHNTHLRYDFTPP
                     NQKEYHIYIPIGKKDLFATNFKSFNNDQKFQIYSVKKGDTIAKIASKWRVGTKDIQKY
                     NEIAKLSPNSQIIIPVSKNAAPIFENYKVKKGDTLIGISKKFDVEVKEIIKANNIKNS
                     KVAAGDSLVIPK"
     gene            19708..20427
                     /locus_tag="RPW04_000653"
     CDS             19708..20427
                     /locus_tag="RPW04_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HDX6294759.1"
                     /translation="MVKNLPYYPGTSDFKTNKVNNSSSMQKATMRPYTINGKTYYPTV
                     VEVGDTASGIASWYGPNFHGKKTSNGESYNMNAMTAAHKTLPMNTMVKVSNLKNGKST
                     VVRINDRGPFVAGRIIDLSKAAANDISMIAAGTAPVRLEVLGFYGKIETPSNKSATTH
                     TYSGGNFMVQIGAFRKRDGANTYKTQYDKTSGYRTAVRNYILEGEPIYRVFLTGFRSE
                     DEARDFIGTSKFKGAFIVRDN"
     gene            20428..21000
                     /gene="hisB"
                     /locus_tag="RPW04_000654"
     CDS             20428..21000
                     /gene="hisB"
                     /locus_tag="RPW04_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004509164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HDX6294760.1"
                     /translation="MVKKHRETKETDISVELEIYGSGKCEIDTGVGFFDHMLNALCKH
                     SLMDIKLVCKGDLFIDDHHSVEDCGIVLGSAIKESIYPLSCVERYGNSIVVMDEAAVE
                     CAIDLSNRPYLVYESSLNEKIGTFDSELIREFFQALAMNAGITLHLIRLRGDNSHHIA
                     EATFKAFAVAFRRAISKNDRMGTPSTKGVL"
     gene            20997..21485
                     /locus_tag="RPW04_000655"
     CDS             20997..21485
                     /locus_tag="RPW04_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004319604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonate 8-phosphate
                     phosphatase"
                     /protein_id="HDX6294761.1"
                     /translation="MIEIIFLDVDGCLSDGGIYKTNTGDEFKRFDVKDGFAIEQWNKL
                     GKISAIITGKRSLIVENRAKELGIKYCFQGVKDKLAQADQILKLEGFSWGNAAAIGDD
                     LNDMKLLSKVAISFKPIDAHNSLQTDIELSKKGGYGAVREMIDILIERLNLKDEWMKR
                     WL"
     gene            21464..>21890
                     /locus_tag="RPW04_000656"
     CDS             21464..>21890
                     /locus_tag="RPW04_000656"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HDX6294762.1"
                     /translation="MDEALVIKIFYFVIALFSVSMVFLMLQTPYSANIYKNELKVANM
                     QASNVVSYELNSTLVYGRYEASDVTRYETYDLLNSFSGLFLRGDYTHSLSSKLAILKD
                     DNITLKNSAIYRNLITGLRYDSEEIVYDSKAKIINSNVPF"
BASE COUNT         7531 a         3032 c         4182 g         7145 t
ORIGIN      
        1 agactcaaaa tctcaaactc aaaaaactag tgataaaacc gctcaaaaaa ataagactca
       61 gacctctgtt gcggctaaaa cagctaaaaa agaagatgat aaaaaatctc aaacacaaaa
      121 taaaaatacc ataaaaaata tacctaggaa caaaactata gttttggatg cgggacacgg
      181 tggaaaggac gccggagcgg ttggttcaag aacgctttat gaaaaaaatg ttgttttaaa
      241 agtagctttg aaagctggaa agatactcaa aaatagaggt tacaaagttt attatacgcg
      301 agataaagat aaatttatag gtcttagaaa tagaactagt tttgccaatg ataagatggc
      361 tgatcttttt atatctattc atgctaacgc cgcgccaaat agtaaaaaag ctcctgaaat
      421 gcaaggtata gaaacatttt ttcttagtcc aactagaagt gagagaagta tgcgagcagc
      481 aaatttagag aataaatcag atacagatga gatgaattat ttcactaaaa ttagcttttt
      541 aaatttctta aatagagaaa aaataattgc ctcaaataaa cttgctatcg atatccaaac
      601 aaatctttta agctctgtga gaactaatta taacgtgtct gatggaggag taagggaagc
      661 tcctttttgg gttttagtag gtgcgcttat gccagcagtt cttatagaaa ctggatatat
      721 tactcatcca aaagagggaa aactccttgc aaatgatgct tacgccgata aattagcgga
      781 gggaatcgca aatggaattg atgattattt tgcgaaaaat agatgataac ttttagaggc
      841 gacggacttt ataattctaa atttgatgat atatacttta atacaaatga gcctttgatc
      901 gaatgtgaac atacttatag cagcgtctta gatgaaatta atgctaaatt tattgttgtt
      961 gcagaggctg gatttggcac cggactaaat ttttttagca ccgttttaaa gtttctaagt
     1021 ttaaatagta ccgaacttca ctacatagcc gtggagaaat atccttttaa aaagagcgaa
     1081 ttaagagaaa tatatcttaa atttgagata ttaaaaccgt tttttgatga gtttatagag
     1141 caatatgaga tcttagatgg tgcattgatt cgtataaagc ttttaaatga aagagttatt
     1201 ttagatctgt actttggtga tattttagat gcttttgatg agcttagttt tagagcagac
     1261 gcatggtatt tagatggatt ttctcctact aaaaatccag atatgtggag caaagaagtt
     1321 tttgataggc tcagcaagtt ttgtaaaaat agagcaaaag tacgtacttt tagcagtgct
     1381 aaaatagttc aaaatagatt tttagagcat ggatttaata taaaaaaatt aaaaggtcat
     1441 tataaaaaac gcgagatttt agaagctagt ttggaacatt caagcccaaa aatacttaaa
     1501 gaaccgtggt atgcattgcc aaatatatct aaatttagtg atgttttgat tatcggtgca
     1561 ggagtagccg ggttagcggc tgcttttaaa tttaaaaagg ctggatttaa tgtttgtata
     1621 gctgaaaaaa tgagtgaagc tgctacaaat ggaagttcaa atttagcggg aattttgatg
     1681 cctcttataa ctaaacctaa ggttgcttta ggaaatatgc atatgagcgc ttttttattt
     1741 gctaggcatt tttatgcaaa tagtccgttt gctgattttt gcggcgttta tgattatggt
     1801 gtgaacgact tagaaaaaac aagattatct ctttgggata gtgagatttt taaatttgaa
     1861 aacgattttg agccgtatcc aagagcgttt ataaaaagtg ccgctcaaat acgaccaaaa
     1921 gagctttgca tgagtttagc gagtgagttt gatataaaat acggttatga gtttgaatcg
     1981 atagaaaaaa gcacgggcgg ttacgtagtt aaatttaaaa attcaaaaaa tattttttca
     2041 tctcttgtga tatttgctat gggagatgct agcacaaatc tgtttcaaaa cgtttttgca
     2101 gacgaattta tgcagcttag cagtgtcaga ggtcaagtaa ctcacttaaa taaagtttta
     2161 aatttaaata gcgcatttag cgctcgcggt tatatgtgca aagatgttag aggcatacaa
     2221 gttgtaggcg cgacgtatga tagaaatgat aatcgcagcg cagcaagagc taccgatgat
     2281 gagaaaaata tagattcttt atctgagttt ataacaaatt tagatgttaa agtagtaggt
     2341 tcaaatgttg gatttagagg atatagcggc gatagatttc caattgtagg tgccgtgcat
     2401 aatgctagtg agtttaagaa aatttacaaa tctttattat ggacaaaaca tagcaaaaac
     2461 aatgaatttg ccgttcacca cgaaaatatt ttgataagta gcgctcatgg ttcaagagga
     2521 cttggaactg ctatttttgg agctgaaatt ttgctagata tcgctttaaa tcgtcctgtt
     2581 tgcactacaa acagtatatt aaactctcta aatcctgcaa gatttttagt aagaaaactt
     2641 aaaagaggtt tagttagata aatttttata tctgaactag gtataaaagt agatttgacg
     2701 cccacattta gcttacggtt ttagtaaaat tgctaggatt caatccaaag tattttttaa
     2761 aagcagttgt gaagttatgg ggctgtttat atcctaattc ttttgagatt tgattcaaac
     2821 taagctctcc tttttctata aattcctttg ctttttgcat tttagtatcc atatgtacgc
     2881 tataaggagt cgttctaaat agagttttaa aaccttgttt tagcttgcat tggtttaatc
     2941 ttactttctt tgatagttct gttatagaag gagggttttt ataatcgttt tttaaaatct
     3001 ccatggcttt atttaaagat aatatatcaa atttactcaa atttaagctt tctttgagat
     3061 ttaaatttaa atttgtcagc tcataagata aaatttcaag tattttagct tttataaata
     3121 gagcatttat ctgtttttgg tttataaatt tataaatttc acttgcacaa aatgctgttt
     3181 tagcataagt cgctctgttt tgtataattt ttgagctatc cgtgttttga atttttgttg
     3241 ttatattttt atcaagatat ttttcaagaa actcgttttt tatggttatt atcacgtttt
     3301 tgatttgagt atttgctttg taatgaatta ctcctttatc catataaaag tagtttataa
     3361 gagttcgacc ggcttttgga gctaaataaa agtcgcaaac agtactttta tagtagtgat
     3421 ctgcgctaaa agttatgttt atcgtcactc ctttgaagtc cgagtcgtag ttcgcggcat
     3481 tgtcttcata aattataaaa ttgtttatat gtagacctat atcttttgaa atttcaacta
     3541 ttttggttga tatatttgct ttgttttggt ctatttggat tgatttattt atgcgtgaaa
     3601 tgtcgctatt atctaaaata aatttattca aaaaatactc ctttggtaaa atttactact
     3661 tatttggtaa tttttatatt gaaatctact atcaatttta gtattataac aaaaatatct
     3721 aaggaattat aaatgtataa aaagattact attttactat ctttagtttt agcaagcagt
     3781 ttatatgccg gtacaaagct tgatgatgtc atagtaagtg caaatagaag tgcacaaaaa
     3841 cttgatgata taagcaaaag cgtatctgtt atagacggcg atacgataaa gcgcagacaa
     3901 agcacgaatt taaccggcat tatagccgat gagccgggaa tttcttatgc tcctgatgga
     3961 atgagctcgg gacagattat tttaagagga tttagtactc agaactttag agcacctctt
     4021 tttgtagacg gtaataggtt tagaggtaga aatactcttg agtatatgct ttttgatcca
     4081 aaccagatag agcgaataga gataataaga ggtcctgctt catctttgta tggtacggat
     4141 tcttttggag gcgtggtaaa tgttataaca aaaagagcta ctggagatgt tcaagctcca
     4201 tttaatataa cagatactta tataagcagt gaatatcaaa gcgtaaatca tgcgattgca
     4261 aatagatttc agcttggagg agttggagac ggatttgata ttttgttagg tataaactac
     4321 aaagacggag ataattacgg cacgaaagag ggcgtaatac caaactcgga ctatctttat
     4381 agaggctttg atctaaaagt cggttatagt tttttagata cgaatagagt agaacttacg
     4441 gctagatata ctaaagtaaa tcgaggtaga gctgcaggac aatttgcatc tcctggagcc
     4501 ggaaatgcac ccggtgtttt gcaaagacag atgagagaag agcctatgag ggaaaaatat
     4561 ttagctttgg gatatagtgc gcagatgcaa aacggtagtt tagaagctag tctttataga
     4621 agagagcttt atactcatat aaacgtaatt ccaaatttaa actcgccgca aaaatgggtt
     4681 gataattatg ttattggacc agttgtatat ggcggtaaaa gtatagttgc ttatagcggt
     4741 gagtctttgt ctcagacata tggaatagac tggtattatg agagtagaga cggtagcgag
     4801 cagagcgtaa acggtaaaaa tagaataaaa agtgcgccaa attctactca actaaatatc
     4861 ggagtgtttg ggctattgga gtatggattt gaaggaggaa ctttgctgag cgctagtctt
     4921 aggcatgatt attttaagac cggacttgaa acaagtttta tcaaaaataa cgagataaaa
     4981 aaattgtttg aaagtgccgg agatacgtct acaaacaaaa ctactagcgg ttttggtatg
     5041 atatatcctt tatttggagg tttggatttt gttttaaata taaactcatc ttttagggcg
     5101 ccatcagtca cggagataac ggctgttggt gatggagtga gcggcgtatt tactcttcca
     5161 aatagtagta taaaaccaga aaccggatta agttatgaaa ccggattaaa gtataaagac
     5221 ggtttgataa tttcaaattt aacagcattc acaagcagtt ataaaaattt aatagttacg
     5281 agaaatataa catataaaaa tactcccgca aggcagctgc aaaacgtagg agaatctagc
     5341 ataagcggaa ttgagtttga tatagcttat aaattgcttt caaatttgat ttttaaaaca
     5401 aatgcaagtt atctttacgg cgaggataaa acgtctcata aaccattgcc ccagataatg
     5461 cctttaaatg gttttatcag tctaatgtat gagccaaaat ctataaaaaa atcatatata
     5521 gaatatacta ctcaatgggc gtcaaataag acaagaacgg ataatttgag tgagcgagaa
     5581 cgaagcggtt acgcggtttc aaatttatat tttggaaaag aattcggaaa tatgggcgct
     5641 tttaagagtg tggagttgaa tttcggcatt gaaaatatat tttataaaaa atattctatg
     5701 ccatcagtgc ccgaggatat tagatatccc gtgagcaaga caaatccgct tttaaatcca
     5761 ggtagaaatt ttaaaatagg cttaagagct agtttttagg agattttatg aaagatattt
     5821 tatttatagg agccaagccc tcccaactga gtaattttga gagtttagat gagtttaaaa
     5881 gagttgaatg cgttagtcaa tatagtatag aagatatgga ttttaacaga tataacggta
     5941 ttttgatgac tatttatcta gatcaatatc taataaaaaa acttagtttc aaatttgaaa
     6001 actttttaaa tttaggagga cgagtgtttt ataacggtca tattatttta ccgtttttaa
     6061 aggaattaaa agagtttaaa cctattcaaa atcccaaatt tacggatttt tttattatgc
     6121 agtgcattta tcataaaatt tatgatcaaa tagacataga aaagttaaat acgagaaaag
     6181 gcgtggcagg attttactca agaggtcaaa atccacctcc tttaaacgca gatattatca
     6241 cttctataag tagcggtaat gttcctgttg attgggagat tgaggttgga aatggaaaat
     6301 tctactctca ttgtggaaat gatctttata cttgcggtga aaattacgag ataaactcta
     6361 agatattgaa aaatatcatt agttatttag gagatagata tgaatagtat agcggcttta
     6421 gatagcggaa caccgtatca tatagtatct ttgcataaaa aaccttttaa taaatttttt
     6481 tcaaaagtta tttatatacc tgagcttcaa atagatgatt tgcatgatgt ggatattttg
     6541 atagtgactt gcgctagttc gatagaaaaa attctagagc ataaaaatat tttttatgag
     6601 tttttaaaag ccggaaagac tttagtcgta atgggtagaa acgatgctga gctttggctg
     6661 catgacgtga aattatccaa gtttcctttt aatttttggt ggtggttaga taagaaaaat
     6721 aatagcatag atatagaggt ttcaaatgcg gattatgaac tatttaagta tataaatttt
     6781 aacgatatga tatggcatta tcatgatgga tatgagccta tgaacggtgc tataagtgtt
     6841 atagaacata aaatacagaa aaaaactata tttttagata ataaagatta ttacggtggt
     6901 agactaatat taacttcctt agatccattt tatcatcacg gaagtttttt tatgccaaat
     6961 gctacaaaat ttgcagaagc atttttaaga tatttatcta aaatggaatt atataagtga
     7021 aaaaaatatt tgttgtttta tttgtattgc ttgtattttt attttcacaa gaaatagagt
     7081 ttagcgatga gagaggaaat ttgataaagc tcgaaaaacc agctagtaga gtcatcagtt
     7141 ttccgattcc attagcttca tttagcataa gcgtagataa taacgcagat aaactagtat
     7201 ccatccatcc gcttgcaaaa atcgcaattc aaaacggtat cttaggaagg atttttccta
     7261 agacgcttga tttacaaaca aatgcagtcg gctcaaattt cgttccaaat gtggaagaag
     7321 ttataagatt aaagcctgat atagtatttc aatgggcaca tatgtctcaa aagatagttg
     7381 aacctttgca gaaaataggt ataaatttag tacttttaga ctatggagac gagaaaaacg
     7441 ctattaattg gtttaaaata ataggcaaag cttatgattt agaacataaa gtagaaacta
     7501 tacttaaaaa tagaagtttt gttgaaaatc agattacaac tagcttaaaa aatatacgta
     7561 atagaccaaa agttctatat tttttaaggt acaaacaagc ttttttggtt tcaggaaagc
     7621 agacctatca agattataat attaaattag caggcgggat aaacgttgct tctcatatcg
     7681 gtcaaaaaac tgtgaattta gagcagatat tactttataa tccggatata gtactattaa
     7741 ataatttcga gcaagatctc agtcccgagg atatctactc aaataaattt ctaaaacata
     7801 taaatgcggt aaaaaataga gccgtttata aaattccctt cggtggcgag agatgggatc
     7861 ccccgtctca agagtctcat ctgtcgtgga tatggttaaa taagatattt tatggcaaat
     7921 ctagtttaaa tttaaaaaaa gagatgatga atagttataa tattttttat aattataatt
     7981 tgaacgatag tgaaatttta tctattttgc attacgaaaa gaataaaaat agtagatatt
     8041 atgaagatat attggagtga taaaatgaaa aaatacgcag ttgttttgac tgctttgatt
     8101 gcgatagccg gtttttctct tttagtagga agaataagtt taagtgagct tttatatagt
     8161 tcgcaaaatg aattttttga tatgatattg tttgaaataa gactcccaag actgatagcg
     8221 gcgtttttta tcggagctag tttatcggta gccggagcag cgtttcaagc catctttcaa
     8281 aaccctctag taggtccaaa tatattagga gtgacaagcg gtgcaggatt tggagccgtg
     8341 gtgtttatat tattttttaa cgagccgttt ttggttcaaa taggggcttt tgtatttgga
     8401 tttatagctg ttttaatggc atattttata ggaaatatat caaataaaaa ctcaaaacta
     8461 atgctagttt tagcaggcat tatagtcgga gcgttattcg gagctttgat cgccatagtt
     8521 aaatatttgg ctgatcctaa tgataaactt ccaaatatca tatattggct tatgggaagt
     8581 ttgaacttta ctagctggtc tgatcttctg tttttgcttc ccatatcgtt agtcggtcta
     8641 tttttattat gctcttttag ctataaagta aatattcttt ctttgagcag tgatcacgca
     8701 agatttttag gcgagagtag aatgcttagt ttatctatca ttatattatc aactcttgtc
     8761 gtatcgtcta gcgtggctgt tagcggtatc ataggttggg ttggactttt ggtgccgcat
     8821 atagtaagaa tgatatttgg tgcaaataat cttgtagttc tacctatgtc agctttgata
     8881 ggaggaggtt atctaatttt agtcgatacc gtagcaagga gcgctactca gtctgaaata
     8941 ccgcttagca tattaacagc acttattgga gctccgcttg tcggttttat aattatcaaa
     9001 aaggcaaatc agtggtttta aacgtaaata atctatcatt tagttacgca gatgatttaa
     9061 ttttaaatag agttagcttt gatattttaa aaggtgaaac cgtatcgatt ttaggtaaaa
     9121 acggtatagg taaaagtact cttttaaaga tattattgtc tttgcaaagc tatagtagtg
     9181 gtgaaatatt tatagacggc gttaatatcc gttctataaa tttaaaacat agagcaagat
     9241 ttctaggcta cgtacctcaa gcagagaatt caacatttgc atttttagta aaagatatta
     9301 ttttaatggg tagaaacgct catttagggc ttttccaaag accgagtaaa tatgacttgg
     9361 attatgtttt agaagctgca gatatcgtag gtataactaa tttgcttagt aaaaatattt
     9421 atgagttaag cggaggagag aaacaacttg tgttgatagc tagagcttta tgtttgtttc
     9481 ctaagctttt gattatggat gagccgatat cctacctcga tgtttttcac caaaacaaga
     9541 tcttatctct tataaatctt ttaaatacta aatataatat atctgtttta tttacatctc
     9601 attatccaga tcatactctt gctatatctc acaaaactct tttgctaaat ggtgctaatg
     9661 gtgctatatt cggcgagtca aaagatattt taactgatgt aaatttaaaa aatctttttg
     9721 gaataagctt ttttggctta aaaatcaatg aaaaagatag actgttgcca aaatggaata
     9781 tatgaaatta gtatttagtt tttaatcaga tataaattat cttttatatt tataattttt
     9841 tttgtataat taacgcaaaa aaaggaaatt ttatgcattg gttagataaa gaaatagtcg
     9901 tagtcgagat agatgggaga ttttttgcgc ttaatggatg ggatggagag tgctattcga
     9961 gatgttggga gtgcggtgat agaagaggtg ataaatttca caaagtggtc ggagtggata
    10021 cttataagat tactccgcgc tttggagatg agtttgtgtt ggaaaaaaat ccccttatcg
    10081 gaacaatgga tgatataaaa gaacagatgt ataaaagctt gcttccttat atgggtcaag
    10141 caaatactat cagcggcgag atactgcgtg caatacagtt tatagaacat agcattacaa
    10201 aaaatacaga tatcagtgga gctcttaaat ttttatcttt aaatttagat gatgactcct
    10261 gtttgatttt gatcgatgag ataagaaaca atgattttga aaatttttcg gtattgaaac
    10321 aaaaggttga aaatatagtt ttaaaacagt atgaaaataa tgaactagag ataaattatg
    10381 atgattttga ggatatgaac gactaaaatt tgcgcttgca aatcttgtca aatttgattt
    10441 gaggtaaaaa ataaatgaaa atagtagaaa taaaagacag aaattcggtt ttgatagaac
    10501 gacttgtaaa cgtctgggaa gattcgctca gagtgacaca tctgttttta tctgatccgg
    10561 aaatagagaa tataaaaaaa tacgtcccga aagctctata tgatgtttca aatttgatta
    10621 ttttaaaaga tgaaaaagga aatatacaag catttatggg gatagaaggt caaaaactag
    10681 atatgttatt tgtctcttca aaagagcaaa ataaaggttt tggaaagaaa ctcatctgtt
    10741 atggtataaa caactattcc attaacgaag tgtgcgtaaa tgagcaaaat cctatagcta
    10801 aacggtttta tgaatatatg ggttttcgtg tttataaaag atcagatatt gacgaacagg
    10861 gcaatccata tcctatttta tatatgagat tagcataaat tagagatcaa atcagatatt
    10921 taaatttaaa ggcgctaaga agcgccgttt taaatttagt tatttataat ttttaatagc
    10981 tttgtctaaa atctcttcgg cttttttagc atcttcaaag ccttttactt ttacccattt
    11041 tcctggttcg agtagtttat aagtctcaaa aaagtttttt attcggttta gcgtagcttc
    11101 actaaggtcg cttatagagt ggatatctgc gtatcttgga tctatcttag taacaggaac
    11161 cgctaaaagc ttttcgtcca ttccagcttc atcttccatg actaaaacac ctatcaaacg
    11221 gcaaggtatc acgctacctg cttgaagcgg atattcgttt agcactaaga tatctgcagg
    11281 atcgccatca tcagccaaag tgtttggtac aaaaccgtag tttgcaggat agaacatagc
    11341 tgagtataaa actctatcta cgactacggc accgctatct ttgtcgatct cgtactttat
    11401 gtttgagcca aacggaattt cgataactgc gtttagtttg tctggattgc ttccgaattt
    11461 gattttgctt atatccatga ttttatcctt tgattaagtt ttcgattaaa tttttcatat
    11521 ccgctactat tgtttctata gtgcgttcgc catttatcat gtgaagtatt tttttgtcat
    11581 tataaaatgc gcgtatttct tttatagggt caagatatac tttcattcta ttgttaaata
    11641 cttcattgtt atcatcggct ccgcgtgctc tacctaaaac tctgtttctc gctacttctt
    11701 cgcttacatc tacttcaatg acgccatcga gtttaacttc gctttgagaa gctaaaaccc
    11761 tatcaagctc tctcatttgc tcttcgcttc ttggatatcc gtctattaag atatagtttt
    11821 tatcacttga tcttatggct gagatgatag tgtttacgac tacttctaaa ggaactaaat
    11881 ttcctttaga tataaagctg tctatgagct ttcctagctc acttccgctc gcaacttcgg
    11941 ctcttaaaag atctccggtt gaataatgcg caaatttatc atcgtttgcg gctatcatac
    12001 ttgcatcggt tgttttgccg cttcctggcg ctccgatgat taaaaatagt tttttcattt
    12061 agtttccttc cctttaagtc ttagtcctag ctctcttaat tgctcgtttg agacattgct
    12121 aggagccttt gtcatagggc agcttgcacg ctgagtttta ggaaacgcta taacatctct
    12181 tatgctagct gattttgtga caagcatgat aagtctatca agacctatgg caaatccacc
    12241 gtgtggaggc gcaccaaaac taagagcgtc aagtaaaaat ccgaattttt ctctttgctc
    12301 cgcttcatct atttttagta atttaaatac tttttgttgg atatcgtttt tgtgaattct
    12361 gatacttccg ccgccaagtt ctacgccgtt taaaacaacg tcataagcta tgcttgttat
    12421 atcttcaagg tcttcttcgt ctgggttgtt tggcatagta aatggatggt gcatcgcaga
    12481 gtagctaccg tcgtcatttt gttcaaacat agggaaattc actacccata aaaactcaag
    12541 cttgttttcg tctatgatgc caagctcgtt tgcaaggaaa gctctaaatc ttcccatata
    12601 atcaagcacg gtttttttat ctccaatacc gaaaaatacg acgtctccta ctttaagttc
    12661 gcatcttttt attagttcat ctatttgctc ttgttcaaaa aatttaacta aaggtccttt
    12721 tagtccgtct tctttaactt gtataaatgc tagacctttt gctccgaatt tacgcacaaa
    12781 ctcttcaaaa cgttgcattt gacgtttgct aaagatatta tctcctcccg gaacttttat
    12841 ggcttttgca cggtttttct ttatattttg tgcaggagtg ctgaaaattt cgttatttga
    12901 ttttgcaaat atatctatga catcaaccat aggtagatca aatcttaagt ctggtttatc
    12961 gttaccgtaa gtctccatag cgtctttgta ctccattctt ctaaacggag ttatgatatc
    13021 gtgtccgcaa gcgtaaaata tatcttttag aatttcttcg ccgactttta tcacgtcttc
    13081 ttgtgtgcaa aagctcattt cgacgtcgat ttgagtaaat tctggttggc gatcggctct
    13141 taagtcttca tctctaaaac aacgggctat ttgaaagtat ttatcaaatc ctgcacacat
    13201 caaaagttgt ttgaaaagct gcggactttg cggaagtgcg taaaaacttc ccggatatac
    13261 gcggctaggc acaagataat ctcttgctcc ctcaggggta gcgcgagtca aaataggagt
    13321 ttcaacctct aaaaatccta gtctatcaag agcgtttcta cacgctatag aagcttttga
    13381 gcgtagttta aatttatcaa aactctccgt gtttctaagg tccaaaaagc ggtatttcaa
    13441 gcgaatatct tcgccgacgt ttggatcgcc gataacaaac ggaagtgcgg cgctctcgtt
    13501 ttctatgtat agctcatcaa ctatgacttc gatctcgccc gtttttaact tcggatttat
    13561 taatccctct cctcttgctc ttatagttcc tgtagctttt aaaacatatt catctcttac
    13621 ttttgatcct atttcgtgtg ctgatttgct atcttttgga tcgcatacaa gctgaataat
    13681 acctgttcta tctcttaaat ctataaaaat gacaccgccg tgatcacggt atgaatttac
    13741 ccagccgcaa agctggactt ttttgcctat atcgttgctg ctaaggtcgg tgcaataatg
    13801 actccgcata ttttgtcctt tcttaataaa aactactatt ataatacaag ttttataaat
    13861 tttttatcaa actatagttt atatatttaa atttaaaata gattgttatg tttttaaatt
    13921 tagttatgat tttatagttt agtttttaag catttttttt ataaaataca aaaattagga
    13981 aaacataatg attgaaattc ataaaaattt aaaagctgta ggaatattaa ctagaaacgc
    14041 aatagaccaa aaagacgcta taaacacgtt aaaaaaaata ctggaaaaat atgaagtaag
    14101 cgtactttta gagcatcata tagcagccga gttaaatgaa gtaggctgca gtttagacga
    14161 gatgttaaaa aatacaaatt taataatatc agtaggcggc gacggcaatt tcatcagcac
    14221 ttgcagaaaa tgcgctagta gcggcgtgtt tgtatttggc gtgcatactg gacatcttgg
    14281 atttctcact gatgttacat taaatcagtg tgataaattt tttgaagagt tttttagagg
    14341 atgctacgaa atagaaaaac catatatgct tgaagctaaa tttaaaaaag atgataagat
    14401 aatggaaaaa ttagctttta atgatatagt tttgatgaga cgaaagatcg attctacatc
    14461 taatatagaa gcttttttaa actcaaaata ctttaattca tattttggag acggcgttat
    14521 aataagctct gccatgggat caactgctta taatatgagt gcaggcggag cgataatata
    14581 tccgctttgc gacgttttta gtcttacccc tgtttgttct catagtttaa ctcagcgtcc
    14641 gctcatactt ccaaaagagt ttaaagtaga atttaaaagc tgtgatgatg ttgtagtttt
    14701 gatagacgga caagatagag tggatttgaa aaattatact agcgtagaag ttggaattag
    14761 cgatgttaga gtaaatctta tccgccataa agatagagat tattttgaaa ttttaaaaca
    14821 gaagcttaga tgggggcata atgataagta gagtttatat aaaaaactat cttggattta
    14881 gcgagcttga gcttaatttt ggatccggac ttagcgtatt taccggagtc agcggagccg
    14941 gaaagtctgt tttaatgggt gcgattttat ctgtttttgg atttaaagat agtgaagcaa
    15001 agcttataga agctgatgtg gagtatgatt tttgcgcaga tgaatttggc atagaaacag
    15061 cagatataaa tacgtttaag ttattaaaag ataaaagcac gagatatttt ataaataatc
    15121 aatctatatc taaaaagaat cttagtttga tagctggttc tcacttaaaa tatctaagcg
    15181 caaaagagat aggcgagttt gaaaatagca gactaatatc cgttttggac ggtttggcta
    15241 gtaaaaatga taaaaatttt gttctaaatt taaaaaactt tactactaaa tttgaagagt
    15301 ttattctcat caaaaaggaa ttggaaaagg ttttagaaga ggaaaaaaaa gtagatgagc
    15361 taaaggaatt tgctagtttc gagatacaaa aaatatcaag catcaatcca caaatagggg
    15421 aatttgatga gcttatcgct actaaaaaaa agttaagtaa aaaagacaag atagaagccg
    15481 catggcaaaa agctgatgct atatttaact atgaaaaagc tgtgcttgat gctcttgaga
    15541 tcagcgatat cgacgggacg ttttttagtg atgcgttaaa tgagttaaag atcgctagaa
    15601 gcagcgtgag ttttgatgaa tttgacgata ttaatatcga ggaaatttta gatagaattg
    15661 agaatttaaa cggacttata aaacgttatg gaagcataga agaagccata gacgtgttaa
    15721 acacaaaaaa agcggagttg gctcattatg aaaaaatcga gtttgaaaag agtgaacttg
    15781 agtttaaatt taaaaaactt catagtgaag tgttgaattt agcaagtagc atttctaaag
    15841 ctagaaatga acaaatcaca caatttgcca tgattttaaa cggatattta aaagagcttt
    15901 atatggatat ggtatctgta aaattatccc aaaaagagtt gggaaatgac ggcattgatg
    15961 cagtagaaat cagtttaaat agttcaaatt taaaaactct aagcagcggc gagataaacc
    16021 gtttaagact ggcttttata gcaagtgaag ctaaaataac aggttttgga aacggagttt
    16081 tgatacttga tgagattgat tctaatctga gcggaaaaga ggctatgagc atcgcagatg
    16141 ttcttttaga acttgctaag ttttatcaga tatttgctat atctcatcag cctcaactca
    16201 gctcaaaagc gcatcatcac tttttggtag aaaaaaatgg cgagaattca tttgcaagag
    16261 aattagacgc aaatgataga ataaaggagc tttcaagaat gataagcggt gaagttataa
    16321 gcgaagaagc tagagaattt gccaaaacgt tgcttaatat ttaaagatta aacaaagttt
    16381 aaaatgatac aataaacaat tattattaat aataattata agggagatta tgaaagaaag
    16441 agttttaata gtcgatgata ataaggcttt agcaagatta atagctaaga aaatggaaaa
    16501 taatgttgac atggacatag ttgttgctca tacttttaat gaagcaagag atatcgtcga
    16561 tgacaacgat gattttttta tagcgctttt ggatctgaat ttaccagatg cgccaaatgg
    16621 cgaaatagta gattatataa tatctaaaaa tattcttgtt atagttctta caggaagtat
    16681 agatagcgcg acaaaagata tatttatgaa taaaaatata gtggattacg tcgttaaaag
    16741 caatatgaat aatatagatt atatttttga tagtataaat agacttagta aaaacagata
    16801 ttataaagtt atggttgttg atgatagtac gccgatgaga aataaaatta aacaaatttt
    16861 actctctcag cagtttaagg tatttgccgc agcgcacgga gaggaagcta tgagttatct
    16921 agccgataat ccggatatta aactcgtact aactgattat aatatgccgg ttatggacgg
    16981 atttgagctt atgggtcata taagggaaaa atattctaaa aatgatctaa gtgttatagc
    17041 tataacagga gatggaaaag acgccgatac tggagcaaaa tttctaaaaa acggagcaaa
    17101 cgattttatt gttaaacctt ttagtaaaga ggagttagtt tgtcgtgtaa ataatagtat
    17161 cgagtttatg gaaaatatca aatttatggc aaagctagct aatacggatt ttttaagtgg
    17221 agcttatagt agaagatatt tttatatgga tatgaaagag tattataaaa actgttcaga
    17281 tcaaagcttt gctgttgcta tgtttgatat agacgatttt aaaaagataa atgataaatt
    17341 tggacatgat ataggagata ttatcataca aaaactctcg agttttttaa taggctggat
    17401 tagcgaagga gatttggttg ctcgatttgg tggagaggag ttctgtgtag ttttgaaaaa
    17461 tattaatttt gatgatgcag ttaaaaaagc agtatctata agagctaaaa tcgcctcttc
    17521 tttgataaat ataaaagggt ttgatatcaa atttacagtt tctataggcg tcacgaacgg
    17581 agatttttct aaaaatatcg atcatattat atcaaaagcc gatgaagcac tttataatgc
    17641 taaaatagca ggcaagaata gggtagaaat actatgatca tagatacgca ttgtcatctt
    17701 gatgatgaga gatatgatga ggatctagat gctgttcttg aaaatgcatt taaaaacggt
    17761 ataaaaaaaa taataattcc aggcgctgat attaatgatt taccaaaagc ctgtaaaata
    17821 gcaaatagtt atgaaaattt atatttttcc gttggcgttc atccttatga agtagatgga
    17881 tatgataaaa gtcgtttaga atcgtttgca aatgatgata aatgtgtagc cgttggtgag
    17941 tgcggacttg attatttcag gcttcctgag tccggagttt tggagtataa aaataggcaa
    18001 aaagaagttt tcatagatca aataaagctt gcttgtgagc tcaaaaagcc tcttatagtg
    18061 catataagag atgcaaacga agatagtcta aatatattaa aagagtatca aaatgatctt
    18121 gtaggcggag ttttacattg ttataatgca agtccgattt tgcttgaatt aagcgataag
    18181 ttttattatg ggataggcgg agttttaacc tttaaaaacg gtaaaaaact ggttgaaata
    18241 ttacctaaaa ttccaaaaaa tagacttata atagaaacag acggtccata tctttctcca
    18301 gaaccgcata gaggaagtag aaacgaaccc gtttttacaa attatgtagc tcagaagatg
    18361 gccgacatat taaatttgaa aaaagaagaa gttgaggaga tgactacaaa aaacgcacaa
    18421 aaactattta atatttaagg agttcaatga gattttttat agcaatttta ttatgttttt
    18481 taacttatag ttcggctttt ggatttattc aaactagaga tgattatagt gcacagctaa
    18541 gaatcttaaa agaacttgat atagacccaa aatatatgaa agatccgcac tttctagcta
    18601 tgaaagccga gagatcaaat atagctaaaa aagattttgt aaatactata aaagaggagt
    18661 ataagcatat ctctatgtta aaagagctta taagtaaaac agatatgcca aaatcgtttt
    18721 tatatctagc tatggttgag agcgggcttt caaataaagc tgtttccaat gtaaaagccg
    18781 ttggtatgtg gcagtttatg gaaggaacag caaagcttta tggacttaga gtcgataagt
    18841 acgtagatga aagacgtgat ccggtggctt caactttggc tgcagtgcaa tacttaaaaa
    18901 gattaaaaga tcagtttggt aaatggtacc ttgctataat ggcttataat agcggtgaag
    18961 taagagtaaa acaggctata caaaaagcag gtacagatga gcttagtgta cttatagatc
    19021 ctgataaaaa atatctatca ttagaaacaa ggctttttat aagaaaaatt ttactagcag
    19081 caaatatagc agaagatagc gattttatta tatccaatga ctcatcaatg ttaaatagac
    19141 caaatcaaat aagcgtttca aaggttttcg ttcccggagg aactagcctc gccatggtag
    19201 ctagtagcat cggtcttagc ttaaaaaaac taaaagagca caatactcat ttgaggtatg
    19261 attttactcc gccaaatcaa aaagagtatc atatatatat tccaatcggc aaaaaagatc
    19321 tatttgctac aaattttaaa tcattcaaca acgatcagaa gtttcaaatt tatagtgtaa
    19381 aaaaaggtga cactatagca aaaatagctt caaaatggcg tgttggtact aaagatatac
    19441 aaaaatacaa tgagatagca aaactaagcc caaattctca gataattatc cctgtatcaa
    19501 aaaatgcagc tcctattttt gaaaattata aagtaaaaaa aggcgatacc ttgataggga
    19561 tatctaagaa atttgatgta gaagtaaaag agataataaa agcaaataat atcaaaaatt
    19621 ctaaagtagc agcaggagat agccttgtta tacctaaata aaatttcaat tatagttata
    19681 actatcctat tttttacggg ttgttcggtg gtaaaaaatt taccttatta tccaggtact
    19741 agtgacttta aaacaaataa agtaaataat tcctcaagta tgcaaaaagc cacaatgcgt
    19801 ccttatacga taaacggcaa aacatactat cctactgttg ttgaagtggg tgacactgca
    19861 agcggtatag ctagttggta cggtcctaat tttcatggca aaaagactag caacggcgag
    19921 agttataata tgaacgctat gacagcagcc cataaaactt tacctatgaa cactatggtt
    19981 aaggtttcaa atttaaaaaa cggaaaatct acggtagtta ggataaatga taggggacct
    20041 tttgtagcag gtagaataat agatctatca aaagccgcag caaacgatat atctatgata
    20101 gcggccggca ctgctcctgt taggcttgag gttttaggat tttatggcaa gatagaaact
    20161 ccaagcaata aatcagcaac tacgcataca tattctggag gaaatttcat ggtacaaatc
    20221 ggagcgttta ggaaaagaga cggggctaat acctataaaa ctcaatacga taaaacaagt
    20281 ggttatagaa ccgcggttag aaactatatc ttagagggag aacctatata tagagtattc
    20341 cttactggat ttagaagcga agatgaagct agagatttca taggcactag taaatttaaa
    20401 ggcgcattta tagtaaggga taattaaatg gtaaaaaaac atagagaaac taaagagact
    20461 gatattagcg tagagcttga aatttatgga agcggcaaat gtgagataga taccggagta
    20521 ggattttttg accatatgtt aaatgctctt tgcaaacatt cgttgatgga tataaagctt
    20581 gtttgtaaag gagatctttt tatagacgat catcatagtg ttgaggattg cggtatcgta
    20641 ttaggatctg ctataaaaga gagtatatat ccccttagtt gtgttgagag atatggaaat
    20701 agtatagtcg ttatggatga agctgcggtt gaatgtgcaa ttgatctgtc aaatagaccg
    20761 tatctagtat atgaaagtag cttaaatgaa aaaataggca catttgatag tgagcttata
    20821 agagaattct ttcaagcttt ggctatgaat gcaggtataa cacttcatct aataagacta
    20881 agaggagata actctcatca tatagcggag gcaactttta aagcttttgc cgtagcattt
    20941 agacgtgcta taagcaaaaa tgatagaatg ggaacaccta gtacaaaagg tgttttatga
    21001 tagaaattat atttttagat gttgatggct gtcttagcga tggcggaatt tacaaaacaa
    21061 ataccggcga tgagttcaaa aggtttgacg taaaagacgg ttttgctata gaacagtgga
    21121 acaaactagg taaaatctca gccatcataa ctggtaaaag atcacttata gtcgaaaata
    21181 gggcaaaaga acttggtata aaatactgtt ttcaaggagt aaaagataaa cttgctcaag
    21241 cagatcaaat tttaaagtta gaaggattta gctgggggaa tgctgctgct ataggagatg
    21301 atttaaatga catgaaatta ctttctaaag tagccatcag ttttaagcct atagatgctc
    21361 ataactctct gcaaacagat atagaactta gcaaaaaagg tggttacggt gctgttaggg
    21421 agatgataga tatattaata gagcgtttaa atttaaaaga tgagtggatg aagcgttggt
    21481 tataaaaata ttctattttg tgatcgctct ttttagtgta agtatggtgt ttttgatgtt
    21541 gcaaactccg tactcggcaa atatatataa aaatgagcta aaagtggcca atatgcaagc
    21601 tagtaatgtt gttagctatg aattaaattc tactttagta tatggaagat atgaagctag
    21661 tgatgtcaca agatatgaaa cttatgatct tttaaatagt ttcagcgggt tgtttttaag
    21721 aggagattac actcactctt tgagttcaaa attagctata ttaaaagatg ataatataac
    21781 tttaaaaaat agtgcaattt atagaaattt aataaccgga ttaagatatg actcagagga
    21841 aattgtctat gattctaaag caaaaattat aaatagcaat gtgcctttta
//
LOCUS       DAPPKW010000018        21384 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.018, whole genome shotgun sequence.
ACCESSION   DAPPKW010000018 DAPPKW010000000
VERSION     DAPPKW010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21384)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21384)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21384
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.018"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(229..717)
                     /locus_tag="RPW04_000657"
     CDS             complement(229..717)
                     /locus_tag="RPW04_000657"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294763.1"
                     /translation="MKKAFTMVELAFVIVITGLLASVSIPKLTMSRTDAEVAKIVVDI
                     KNTFDKINSIYISNSSVNKKLNADKNEVDSYLHLRLLIGNDSTLSDFEAIKRGAKEHP
                     WAVECLFYSIDNSTIKFKTMWQQSSISWKKTCNALYLHPTMKEWIQNGIQLGGDSILR
                     NS"
     gene            885..1907
                     /locus_tag="RPW04_000658"
     CDS             885..1907
                     /locus_tag="RPW04_000658"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDX6294764.1"
                     /translation="MNRKKIYNPSSNETLNDRKVFGGNPHGILNFTKAKYTWALKLWD
                     LMEANTWFPKEVDTTDDVRDYACNLTTAEKRMYDLVWSQLISMDSFQTNNLADNINPY
                     ITAPEINAILARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKYDDVLRKKNDYISSV
                     YEELAGEVTDEKLLLAMVANQILEGVYFYSGFTAIYALARAGKMLGSAQMIRFIQRDE
                     ITHLLLFQNMINSVRKERPDLFTSEVEAKIYEMFKKAGDLEIEWGKYITGNQIMGFTD
                     DIIEEYIHYLVDDRLTSIGLKKLYNAKHPIKWVDDFAKFNDQKSNFFESKVTNYSKGS
                     LTFDDF"
     gene            1897..2559
                     /locus_tag="RPW04_000659"
     CDS             1897..2559
                     /locus_tag="RPW04_000659"
                     /inference="COORDINATES: protein motif:HMM:NF012993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HDX6294765.1"
                     /translation="MISSLRTLTLDSLGVVNRASELLNLVKDIKPGELALGSELCVSG
                     YESLGDNFENALIANLKKSLSNGAFFGFTHFSDGFNEFILLNGDKEIYKQKKAILFTP
                     NLEQDKFKAGKVEDINLFELEGVKIGVLICFELRFTELWEKLKGADIILVPSLWGKGR
                     KRHFEILCEALALQNRCYVVACSDKDLKFEAVFKPNGHIAKSSEFEPNSANEFKKSLG
                     LV"
     gene            2617..3246
                     /locus_tag="RPW04_000660"
     CDS             2617..3246
                     /locus_tag="RPW04_000660"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HDX6294766.1"
                     /translation="MDSLERARCQKMADDIADVIELTPMVYKAFCSTPRTDFVPVSIN
                     AFKLDAHPIGGNQWISSPLTVAKMTLALEAENCDNILEIGCGSGYQAAILSMLAHRIF
                     SIERIEKLANEAKLKMKKLGFNNVNIRYDDGNVGWKSYAPYDRIILSCACLGVPTRLF
                     EQLKDGGILVAPIKENSKQFIVKFKKNGSNLEKIVLDECEFVPLLDGRE"
     gene            3318..3971
                     /locus_tag="RPW04_000661"
     CDS             3318..3971
                     /locus_tag="RPW04_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002947009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HDX6294767.1"
                     /translation="MMELRTLPFNPATNAVVSEETCNYHYGKHHQTYVNNLNNLIKGT
                     DFEGADLFEILTHSEGAIFNNAAQIYNHDFYWDCIAAKTDISDELKAALQSDFADFKS
                     EFLKSATTLFGAGWTWLVYNPNSHKLEIKNTSNAGTPVTEGLIPLLVVDVWEHAYYID
                     ARNARAAYLEKFYENINWDFVSAAYEWAKKEGLSSVKFYIDEIYKGSGCCGGHCGCH"
     gene            4427..4738
                     /gene="rpsJ"
                     /locus_tag="RPW04_000662"
     CDS             4427..4738
                     /gene="rpsJ"
                     /locus_tag="RPW04_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDX6294768.1"
                     /translation="MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADVRGPVPMPTKI
                     KRYTVLKSPHVNKDSREQFEMRIHARMLDIVAATPDTVDSLTKLDLAPEVNVEVRAMG
                     K"
     gene            4757..5335
                     /locus_tag="RPW04_000663"
     CDS             4757..5335
                     /locus_tag="RPW04_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDX6294769.1"
                     /translation="MEYIVEKIGMSRTVSAPSTPVTLLRLVPAKVCELGEGGKAIVAY
                     AHTKADNKAIKGQQKKYGLSSEFNSFATLSVANSEAGDLDVNPLNEAKVLKVSFNTKG
                     RGFQGVIKRHGFSGGPASHGSRFHRRPGSIGNCEWPGRVQPGRKMAGHYGNEKTTVKN
                     EVVSFDSANGILVLKGSVPGFNGAMGRVRIVK"
     gene            5332..5946
                     /gene="rplD"
                     /locus_tag="RPW04_000664"
     CDS             5332..5946
                     /gene="rplD"
                     /locus_tag="RPW04_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDX6294770.1"
                     /translation="MSKIAVLNEKFEKTSEIELPASYAEVNSHNLYLYVKSYLAGIRA
                     NSAHTKGRSDVSGGGKKPWRQKGRGGARAGSTRTNVWVGGAVAFGPKNNRNYDQKVNK
                     KQKRLALEFALNDKVANGKFFAVDSIEISSGKTKDAASIINKLGVRDALIIKNELDAK
                     TLLAFRNLANCYVIDASEVNAYLVSVYSAVIAEKAALQSIVKEG"
     gene            5949..6230
                     /locus_tag="RPW04_000665"
     CDS             5949..6230
                     /locus_tag="RPW04_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDX6294771.1"
                     /translation="MADITDIKTILYTEKTLGLQEQGVVVIQTSPKMTKNGLKEVLRE
                     YFGVTPLRVNSLRMDGKVKRFKGRVGVRNDFKKFYVKLPDGVSLENGEA"
     gene            6232..7062
                     /gene="rplB"
                     /locus_tag="RPW04_000666"
     CDS             6232..7062
                     /gene="rplB"
                     /locus_tag="RPW04_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012660814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDX6294772.1"
                     /translation="MAIKSFKPYTPSRRFMTGLSSEDITAKPSVRSLLVKIPATAGRN
                     HNGRITSRHKEAGAKKLYRIIDFKRKKFGIPGKVETIEYDPNRNCRIALISYSDGEKR
                     YIIRPSGLNVGDVISSAESGLDIKPGNAMKLKSIPVGTIVHNIELKPGKGAQMARSAG
                     GYAQLMGKEEKYVILRLPSGEMRQVLAECMATVGVVGNEDWANVTIGKAGRNRYRGIR
                     PQTRGSAMNPVDHPHGGGEGKKNSGRHPVTPWGKPTKGAKTRRKKASDRLIISRRKGK
                     "
     gene            7065..7346
                     /gene="rpsS"
                     /locus_tag="RPW04_000667"
     CDS             7065..7346
                     /gene="rpsS"
                     /locus_tag="RPW04_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDX6294773.1"
                     /translation="MARSLKKGPFVDDHVMKKVLAAKAANDNKPIKTWSRRSMIIPEM
                     IGLTFNVHNGKGFIPVYVTENHIGYKLGEFAPTRTFKGHKGSVQKKIGK"
     gene            7356..7688
                     /gene="rplV"
                     /locus_tag="RPW04_000668"
     CDS             7356..7688
                     /gene="rplV"
                     /locus_tag="RPW04_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009295259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDX6294774.1"
                     /translation="MSRAIIKFIRLSPTKARLIADEVQGMNAELALASLSFMPNRGAK
                     YIASAISSAVANGGFEPEEVVVKSCRVDAGPVLKRFRPRARGSASRIRKPTSHILVEV
                     SKPESKEA"
     gene            7690..8388
                     /gene="rpsC"
                     /locus_tag="RPW04_000669"
     CDS             7690..8388
                     /gene="rpsC"
                     /locus_tag="RPW04_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDX6294775.1"
                     /translation="MGQKVNPIGLRLGINRNWESRWFPSKATLPENIGEDYKIRKFLK
                     TKLYYAGVSQILVERTAKKLRVTVVAARPGIIIGKKGGEIENLRSEVTKLVNKDIAIN
                     IKEERKAGSSAQLAAENVAMQLERRVAFRRAMKKVIQGAQKAGAKGIKVSVAGRLGGA
                     EMARTEWYLEGRVPLHTLRARIDYGFAEAHTTYGNIGVKVWIFKGEVLQKGIQADKNE
                     DTSPKKPRRARRGK"
     gene            8391..8816
                     /gene="rplP"
                     /locus_tag="RPW04_000670"
     CDS             8391..8816
                     /gene="rplP"
                     /locus_tag="RPW04_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDX6294776.1"
                     /translation="MLLPKRTKYRKMMKGRNRGYATRGVDLALGEFGLKAVEAGRVNS
                     RQIESARQAYTRHVKRQAKTWIRVFPDKPITKKPLETRMGKGKGGVEEWVMNIKPGRI
                     IFEMSGVSEELAREALTLAMHKLPFKTKFVTKESENEVY"
     gene            8803..8988
                     /gene="rpmC"
                     /locus_tag="RPW04_000671"
     CDS             8803..8988
                     /gene="rpmC"
                     /locus_tag="RPW04_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDX6294777.1"
                     /translation="MKYIDISAKSMSELNALLKEKKVLLFTLRQKLKTMQLTNPNEIG
                     ETKKDIARINTAISAAK"
     gene            8999..9256
                     /gene="rpsQ"
                     /locus_tag="RPW04_000672"
     CDS             8999..9256
                     /gene="rpsQ"
                     /locus_tag="RPW04_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDX6294778.1"
                     /translation="MAVEMKRQIQGVVVAKAGDKTATILVERRVMHPRYHKFVKRFKK
                     YLVHDEKNELKAGDTISAVECRPLSARKSFRLQAVLKTGVE"
     gene            9256..9624
                     /gene="rplN"
                     /locus_tag="RPW04_000673"
     CDS             9256..9624
                     /gene="rplN"
                     /locus_tag="RPW04_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015106543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDX6294779.1"
                     /translation="MIQSFTRLAVADNSGAKELMCIKVLGGSKRRYASLGDIIVCSVK
                     KALPNGKIKKGQVVKAVVVRTKKEVQRANGSLIRFDENAAVILDNKKEPVGTRIFGPV
                     GREVRYANFMKIVSLAPEVL"
     gene            9624..9857
                     /locus_tag="RPW04_000674"
     CDS             9624..9857
                     /locus_tag="RPW04_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDX6294780.1"
                     /translation="MAVKYKIKKGDEVKVIAGDDKGKVAKVIAVLPKKGQVIVEGVKV
                     AKKAVKPTEKNPNGGFISKEMPIDISNVAKVEG"
     gene            9860..10402
                     /gene="rplE"
                     /locus_tag="RPW04_000675"
     CDS             9860..10402
                     /gene="rplE"
                     /locus_tag="RPW04_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004275677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDX6294781.1"
                     /translation="MRLKAKYNESIKPALTKEFDIKNPMLIPAIEKIVISVGAGEGAK
                     DQKLLQNMADTISLIAGQKAVVTNAKKSVAGFKVREGYPVGIKVTLRKEQMYTFLDKL
                     VSVALPRVKDFRGLPRDGFDGRGNYNFGLNEQLMFPEVVYDQILRTHGMNITIVTTAG
                     DDKQAFKLLELFGIPFAKGK"
     gene            10404..10589
                     /locus_tag="RPW04_000676"
     CDS             10404..10589
                     /locus_tag="RPW04_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001085694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HDX6294782.1"
                     /translation="MAKKSMIAKAARKPKFSARGYTRCQICGRPHSVYKDFGICRVCL
                     RKMANEGLIPGLKKASW"
     gene            10600..10995
                     /gene="rpsH"
                     /locus_tag="RPW04_000677"
     CDS             10600..10995
                     /gene="rpsH"
                     /locus_tag="RPW04_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDX6294783.1"
                     /translation="MINDLISDGLTRIRNASMRRLDTTKLLHSNVVEATLKILANKSY
                     IESYNVVEEGNKKFINVVLKYDERGRSVINELKRVSKPGRRVYQGRDEIKRFKNGYGT
                     IIVSTSKGVLSNDEAHKAGVGGEVLCTVW"
     gene            11117..11653
                     /gene="rplF"
                     /locus_tag="RPW04_000678"
     CDS             11117..11653
                     /gene="rplF"
                     /locus_tag="RPW04_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDX6294784.1"
                     /translation="MSRIGKQPISIPNGLDVSLKGSVLVFKKGNNTKELDTKGNVNIE
                     VKDGNIIFTSKGDDRQSRAYWGTYRALANNVVVGLTTGFTKQLEINGVGYKAAAKGKV
                     LELALGFSHPINYELPEGIEISVEKNIITIKGSDKQVVGQVAAEVRGFRPPEPYKGKG
                     VKYVEERIIRKAGKTSKK"
     gene            11663..12019
                     /locus_tag="RPW04_000679"
     CDS             11663..12019
                     /locus_tag="RPW04_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDX6294785.1"
                     /translation="MVANVLKRKISLRIKRKRRIRAKISGTPSCPRISIFKSNRTIYV
                     QAIEDINATTLCASDGRKLGIKANKSGAAVLAKDIAGKLSAKGINEAVFDRNGYLYHG
                     VVAAFAEALRENGIKL"
     gene            12034..12477
                     /gene="rpsE"
                     /locus_tag="RPW04_000680"
     CDS             12034..12477
                     /gene="rpsE"
                     /locus_tag="RPW04_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDX6294786.1"
                     /translation="MEKYNREEFEEVIVDIGRVTKVVKGGRRFRFTALVVVGDKKGRV
                     GFGFGKAKEVPDAMKKAVDDAFKNIVEVKLKGSTIPHDIEVKFNASRILLKPASEGTG
                     VIAGGGARPVVELAGIKNILTKSLGSNNSANVVRATIKALSMLKG"
     gene            12487..12888
                     /locus_tag="RPW04_000681"
     CDS             12487..12888
                     /locus_tag="RPW04_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDX6294787.1"
                     /translation="MGLENLQKANGSTRNTKRIGRGQGSGWGKTATKGGKGQTARKGY
                     NEKRGFEGGQQPLQRRLPKVGFASKFVKPYAINVDKNEGIKTLSEITLDSLKTVHKFS
                     NSIKKVKLIGAGAKDLASKIKDENITVTGNN"
     gene            12888..14150
                     /gene="secY"
                     /locus_tag="RPW04_000682"
     CDS             12888..14150
                     /gene="secY"
                     /locus_tag="RPW04_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002345054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDX6294788.1"
                     /translation="MNKTLINKILITLGFLFAYRVLAYVPVPGVNVDVIKEFFTSNSN
                     NALGLFNMFSGRAAERLSIISLGIMPYITSSIIMELLAATFPTLGKMKKERDGMQKYM
                     QIIRYATIVITIIQAIGVSIGLQSLTGRGGEQAIMIDINLFIAISCISMLSGTMLLMW
                     IGEQITQRGIGNGISLIIFAGIVSGIPSAIGGTINLVNTGEMNFLVVIGIALVILITV
                     GIVIFVEMGERRVPISYSRKTVMQNQNKRIMNYIPIKVNLSGVIPPIFASAILMFPGT
                     ILQASTNEFILAINDFLNPNSYFFNFLTFLFILFFAYFYASITFNAKDISENLKRQGG
                     FIPGVRPGESTATYLNEVASRLTLTGSVYLGLISTLPWILVKFMGVPFYFGGTSVLIV
                     VSVALDTMRKIEAQIYMNKYQTLSAVGL"
     gene            14152..14910
                     /gene="map"
                     /locus_tag="RPW04_000683"
     CDS             14152..14910
                     /gene="map"
                     /locus_tag="RPW04_000683"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDX6294789.1"
                     /translation="MGISIKNAKDLEQLRAANKIVANTLDYLHNYIKPGISLLEIDKI
                     CEDMIRSAGAKPAFKGLYGFPNAACISVNEVVIHGIPNEYKLKEGDIVSVDIGSNLKG
                     YFGDSARTYPVGKISVTDEALIACSKDALYFAIEYIKSGMHFKEICYELENFILNRGF
                     VPLKGFCGHGIGKRPHEEPEIPNYLEGNNPKSGPKIRNGMVFCIEPMICQKDGTPVIA
                     DDKWTVTSKDGLRTSHYEHCLAIIDGKAEILSQI"
     gene            15159..15377
                     /gene="infA"
                     /locus_tag="RPW04_000684"
     CDS             15159..15377
                     /gene="infA"
                     /locus_tag="RPW04_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDX6294790.1"
                     /translation="MAKDDVIEIDGNVVEALPNATFKVELDNKHIILCHIAGKMRMHY
                     IKIMPGDRVKVELTPYSLDKGRITYRYK"
     gene            15537..15650
                     /gene="rpmJ"
                     /locus_tag="RPW04_000685"
     CDS             15537..15650
                     /gene="rpmJ"
                     /locus_tag="RPW04_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HDX6294791.1"
                     /translation="MKVRPSVKKMCDKCKIVKRKGIVHVICENPKHKQRQG"
     gene            15654..16022
                     /gene="rpsM"
                     /locus_tag="RPW04_000686"
     CDS             15654..16022
                     /gene="rpsM"
                     /locus_tag="RPW04_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDX6294792.1"
                     /translation="MARIAGVDLPKKKRVEYGLTYIYGIGLFTSRKILNAVGISYDKR
                     VYELSEDEAAAIRKEIQEHYMVEGDLRKSVAMDIKALMDLGSYRGLRHRKGLPVRGQK
                     TKTNARTRKGRRKTVGAATK"
     gene            16032..16424
                     /gene="rpsK"
                     /locus_tag="RPW04_000687"
     CDS             16032..16424
                     /gene="rpsK"
                     /locus_tag="RPW04_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDX6294793.1"
                     /translation="MAKRKVIKKKIVRKNIAKGIVYISATFNNTMVTVTDEMGNAIAW
                     SSAGGLGFKGSKKSTPYAAQQAVEDAMNKAKEHGIKEVGIKVQGPGSGRETAVKSIGG
                     VEGIKVLYLKDITPLAHNGCRPPKRRRV"
     gene            16452..17078
                     /gene="rpsD"
                     /locus_tag="RPW04_000688"
     CDS             16452..17078
                     /gene="rpsD"
                     /locus_tag="RPW04_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDX6294794.1"
                     /translation="MARYRGPVEKLERRLGVSLALKGERRLAGKSALDKRPYAPGQHG
                     QRKTKISEYGLQLREKQKAKFMYGVSEKQFRRLFSEAARREGNTGALLIGLLEQRLDN
                     VVYRMGFATTRRFARQLVTHGHILVNGKKVDIPSYRVTAGEKIEVAEKSKTNPQIVRA
                     IELTNQTGIVAWVDVEKDKKYGIFTRIPEREEVVIPVEERYIVELYSK"
     gene            17091..18089
                     /locus_tag="RPW04_000689"
     CDS             17091..18089
                     /locus_tag="RPW04_000689"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDX6294795.1"
                     /translation="MKKITTSAYMPTEIEVVNVSENVAKIIAYPFETGYAVTLAHPLR
                     RLLYTSTVGFAPTAVKIDGVAHEFDSMRGMLEDVTLFIINLKNLRFKLKNDSKREVIE
                     YSFKGPKEITGIDLNNDIVEIVNPDSYLATINEDAELKFSLIVEKGIGYVPSEEIRDY
                     IDSEYIALDAFFTPVKKAVYEIENVLVEDNPDYEKIVLTVTTDGQVSPIEAFKHSIEA
                     MYKQMSIFNNVLNIDVNMALTSSQNSNEHSKLLESVENLNLSARSFNCLDKADIRYIG
                     ELALMEESELKDLKNLGKKSLDEIKAVMAEIGYPFGENTLGDSKEALRKKISELKS"
     gene            18108..18464
                     /gene="rplQ"
                     /locus_tag="RPW04_000690"
     CDS             18108..18464
                     /gene="rplQ"
                     /locus_tag="RPW04_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDX6294796.1"
                     /translation="MRHNHGYRKLGRTSSHRAALLKNLTIAIVKAGKIETTLPKAKEL
                     RGYVEKLITRARKGDFNAHKFVFAHLQDKEATNMLVTEIAPKYATRNGGYTRIIKTRV
                     RKGDAAEMAYIELVAQ"
     gene            18689..18955
                     /locus_tag="RPW04_000691"
     CDS             18689..18955
                     /locus_tag="RPW04_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HDX6294797.1"
                     /translation="MIPFSDEELLEPVKESLKVIMPMLEQDGGGMELLGIKNGVVYVR
                     LTGHCHGCAASSQTLKYGVERQLKVDIHPELSVVNIPIGEEFEL"
     gene            18945..19493
                     /locus_tag="RPW04_000692"
     CDS             18945..19493
                     /locus_tag="RPW04_000692"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HDX6294798.1"
                     /translation="MNSKNYKDLGIKLFKASKFDEAKSYFSLAYEDKSSEELLALIDL
                     CEVAKSSGQEALSLFEIYINTAKDNQQDNINEIINILQSGNMQNLKELDYENAITYAD
                     FKNLLKGKDFKDIFQSVMFSTKIIIADKEDLLEFVTKLIDNGYDEMGLNYLESSAVMF
                     AGDIRIEQMLNKLRNKNENLVK"
     gene            19474..20763
                     /locus_tag="RPW04_000693"
     CDS             19474..20763
                     /locus_tag="RPW04_000693"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HDX6294799.1"
                     /translation="MKILLNDGNFITDNSKTCESGCFFLKSNSNAKFENDAIKSGAII
                     ITPKRAKTILNLDDGIRLIGITGTNGKTTTAFAIAFGLRSLGYKVGISGTRGAFICDK
                     QIADKGLTTSQILETLSYIKQAKESGCRYFVMEVSSHAIAQNRIEGLNFALKVFTNLS
                     QDHLDYHKSFSEYARVKSSFFDDDSPKLINGDDESIKFNHKNTMIYWLKNSDASFFVE
                     NYDFKGGIKANIKSKNETANLQSHLQGKFNLYNLLAAIGSIKFLSRVSLQEAADSVRK
                     FESVAGRVEIVSKNPLVIVDFAHTPDGIEKVLDALSHDELVVVFGAGGDRDKTKRPIM
                     GKIVQKYASISIVTSDNPRTEDPNSIIDDILAGMQINNSVFSIENRKDAIKKAIELAA
                     GKTVVVLGKGDEPYQEISGKKYPFSDKLVVQEILSAI"
     gene            20783..21130
                     /locus_tag="RPW04_000694"
     CDS             20783..21130
                     /locus_tag="RPW04_000694"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HDX6294800.1"
                     /translation="MEIEMLYSKIHRATVTDANLNYVGSITIDERLMKAANLLEFQKV
                     EILDINNGERFQTYVIKGEKKGEICLNGAAARKVCIGDIIIIVSYASMKRKKAKNFSP
                     TIVHVNEKNEINE"
BASE COUNT         7704 a         3124 c         4419 g         6137 t
ORIGIN      
        1 aatacatacc aaaattataa cttcatagtc gaaaatttcg tcatataata tattaaaatt
       61 tatttgtata aaatttaagt tgttgtgaaa tttgaaaaat ttatattcat aataaaaata
      121 tttataattc aaggatgatt tattcagatc gttacttttc gtatttaaat ttgattttcc
      181 gatatttatt atatatttca gttatataaa aattatccaa ttataaattt aactgtttct
      241 taagatgcta tctccgccta attgaattcc gttttgtatc cactctttca ttgtagggtg
      301 aagataaaga gcgttgcagg tctttttcca tgagatagat gattgctgcc acatggtttt
      361 aaactttatc gtgctattat caatactata aaataagcat tcaactgccc aagggtgctc
      421 tttagcaccg cgtttaatcg cctcaaaatc agataatgtc gagtcatttc ctattaataa
      481 tcttaaatgg agataactat caacttcgtt tttatcggca tttaattttt tattgactga
      541 gctatttgat atatagatag agtttatttt atcaaatgta ttttttatat cgactactat
      601 ttttgccact tcggcatccg ttcttgacat tgtaagtttt ggtatactaa cacttgctaa
      661 taagccggta ataactataa caaatgctaa ttctaccatc gtaaatgctt ttttcatcgg
      721 taatcctttt tttaatttga attctaatac caatgtaatt aatatattat caataattat
      781 taaaaagcat gcattattat tttagtttca taaatttgta ttcaaagtta tttaatactt
      841 ttttggataa aatctaatct actttaaaat ttgaaagatt tattatgaat agaaaaaaaa
      901 tttataatcc aagctcaaac gagactttaa acgatagaaa agtatttggt ggaaatccgc
      961 atggaattct aaacttcaca aaagcaaaat acacatgggc gctcaagctt tgggatctta
     1021 tggaagcaaa tacctggttt ccaaaagagg tcgataccac cgatgacgtg cgtgactacg
     1081 catgtaatct cacgaccgct gaaaaacgca tgtatgactt agtttggagc caactcattt
     1141 ctatggatag ttttcagaca aacaatctag ccgataacat aaatccttat atcacagctc
     1201 ctgagataaa tgcgatctta gcgcgtcaag cttacgaaga ggcaaatcac tcaaaaagtt
     1261 acgccgtaat ggtagaagcg atctgtgata acacggatct gatttacgaa atggaaaaat
     1321 acgacgacgt tttacgtaag aaaaacgact atatctcaag cgtatatgaa gagcttgcgg
     1381 gcgaagttac ggatgagaaa ctacttcttg ctatggtggc aaatcaaatt ttagaaggcg
     1441 tgtattttta cagtggattt acagcgattt acgcactggc gcgcgccgga aaaatgctag
     1501 gaagcgctca gatgatacgc tttatccaaa gagatgagat aactcactta cttttgtttc
     1561 aaaacatgat aaactcagtg cgcaaagagc gtccagatct atttacaagc gaagtcgaag
     1621 ctaaaattta cgagatgttc aaaaaagccg gagaccttga aatagagtgg ggaaaataca
     1681 tcactggaaa tcagataatg ggctttaccg atgatattat agaggagtac atccactatc
     1741 tcgttgatga taggctgact tctatcgggc ttaaaaagct ttataacgca aaacatccta
     1801 taaagtgggt tgatgatttt gctaaattta acgaccaaaa gagtaatttc tttgaaagta
     1861 aagttacgaa ttatagtaaa ggaagcctta cttttgatga tttctagcct tagaacttta
     1921 actcttgatt cgcttggtgt ggtaaatagg gctagtgagc ttttaaattt agtaaaagat
     1981 ataaaaccgg gcgaattggc gttaggcagt gagctttgcg tgagcggata tgaaagtttg
     2041 ggtgataatt ttgaaaacgc tctaatagcg aatttaaaaa aatcgctttc taacggtgct
     2101 tttttcggtt ttactcattt tagtgatggt tttaacgaat ttatactttt aaatggcgat
     2161 aaagaaattt ataaacagaa aaaagcgatt ttatttactc cgaatttaga acaagataag
     2221 ttcaaagctg gaaaagttga agatataaat ttatttgaac ttgagggcgt taaaatcggt
     2281 gttttgatct gctttgagtt acgttttact gagctttggg agaaattaaa aggcgcggat
     2341 atcattctcg tgccatcgct ttggggaaaa ggacgcaaaa ggcattttga aattttgtgc
     2401 gaagctttag ccttacaaaa tagatgctac gtggtggctt gtagcgataa agatctaaaa
     2461 ttcgaagcag tttttaagcc aaatggtcac attgccaaaa gctctgagtt tgaaccaaat
     2521 tcggctaatg agtttaaaaa atctttagga ctcgtttaat ttaaatacta ctataagcaa
     2581 attttatgta taatttccct ttgttgaagg gaaaaaatgg atagtttaga gcgtgccaga
     2641 tgtcaaaaaa tggctgatga tatagccgat gttatagagc tgacgcctat ggtttataag
     2701 gcgttttgta gtactccacg tacggatttt gttccggttt cgatcaatgc ttttaagtta
     2761 gatgctcatc cgattggagg caatcaatgg attagttcgc ctctaacagt agctaaaatg
     2821 acacttgctt tggaagctga aaattgcgat aatatacttg agatcggttg cggaagcgga
     2881 tatcaagctg caattttaag tatgcttgct cacagaattt ttagtattga gcgtatagaa
     2941 aaacttgcaa atgaagctaa gctaaagatg aaaaaactcg gttttaataa tgtaaatata
     3001 agatatgacg atggaaacgt aggctggaaa agttacgctc catatgatag aataatactt
     3061 agctgcgctt gtttaggtgt tccgactagg ctttttgagc agttaaaaga tggcggaatt
     3121 ttagtagctc ctattaaaga aaatagtaaa caatttatag ttaaatttaa aaaaaatggc
     3181 tcaaatttag aaaaaatagt tcttgatgag tgtgagtttg ttcctttatt agatggtaga
     3241 gagtagtttt taagagtata tttctcttat ttaacttttt tgtgtataat tatgctatca
     3301 aaaataatta aggagaaatt atggaattaa gaacactgcc ttttaatccg gctacaaatg
     3361 ctgtcgtaag tgaagaaacc tgtaactatc attatggaaa acatcatcaa acttacgtaa
     3421 ataatttaaa caacctcata aaaggtacgg attttgaagg tgccgatctt tttgagattt
     3481 taactcactc tgaaggtgcg attttcaata acgctgctca aatttacaat catgattttt
     3541 actgggattg tatagctgct aagacagata ttagcgatga gttaaaagct gctttgcaga
     3601 gtgatttcgc ggattttaaa tctgagtttt taaagagcgc tactacttta ttcggtgccg
     3661 gatggacttg gcttgtttat aatccaaatt cacataaact cgagataaaa aacactagta
     3721 acgcaggaac gccggtaact gaaggtttga tcccactttt agtagttgat gtgtgggaac
     3781 atgcatacta tatcgatgct agaaatgcaa gagctgctta tttagagaaa ttttatgaaa
     3841 atataaattg ggactttgta agtgctgctt atgaatgggc taaaaaagag ggtttaagct
     3901 cggttaaatt ttatatagat gaaatttata aaggttcggg ctgttgcggt ggacattgcg
     3961 gttgtcatta agatataatt gacttataac atttatataa atttataaat tatagcagaa
     4021 ccggctttgg ttctgctttt ttaatctatt agtgctaaaa aattgatttg aaatagtata
     4081 ataaatttgc ttatttagca atctttctat aaccgataat ctataatttt taccgttaac
     4141 taaactttaa atttagcttt tgaactcaaa aatcttttaa atttaaaata tgcaaaatag
     4201 ctttaaattt taatttattc cttttttaaa ggaaaatatt tataaaaaat gtataaaaat
     4261 caacgtaaaa tttgctattt acactctgtt ttggatataa tacgcgtctt ttgatgagaa
     4321 ggcttagcct tacttgtatg cttattctaa cccaaataaa gcctatgcaa gcttgattat
     4381 atcaaaaggt cacgtgtcgt gacaagttat ttttaaagga aaaacaatgg aaagaattag
     4441 gcttaagcta aaagcttatg accacagagt tctagaccgt acagttgcag ctatcgtaga
     4501 agctgttaaa agaactggag ccgacgtaag aggtccagtg ccaatgccta caaagattaa
     4561 acgctataca gtgttaaaat ctccacatgt taataaagat tctcgcgaac agttcgagat
     4621 gagaattcat gctcgtatgc tagatatcgt agcagctact cctgatacag ttgatagttt
     4681 aacaaaactt gacttagctc cagaagttaa tgtcgaagtt cgtgctatgg gcaagtaaga
     4741 gtaaaaggaa taaatgatgg aatatattgt agaaaaaata ggcatgagta gaactgtttc
     4801 agctcctagt actcctgtaa ctctgcttag gctagttcct gctaaagttt gcgagctagg
     4861 cgaaggcggt aaagctatag tggcttatgc gcatacaaaa gcagataaca aagccataaa
     4921 aggtcagcaa aaaaaatatg gtttgagtag tgaatttaat tcatttgcta ctttaagcgt
     4981 tgcaaatagc gaagctggcg atttggacgt aaatccacta aatgaagcaa aagttttaaa
     5041 agtaagtttt aatactaaag gtagaggctt ccagggcgtt ataaaaagac acggattctc
     5101 aggcggtcca gcaagtcacg gctcacgttt tcacagacgt ccgggatcta taggaaactg
     5161 cgaatggcca ggtcgtgttc agccaggtag aaaaatggca gggcattacg gcaatgagaa
     5221 aactacagtt aaaaatgaag tagtgagctt tgatagtgct aatggaattt tggttttaaa
     5281 aggttcagta ccaggattta acggtgctat gggtagagta aggatagtca aatgagtaaa
     5341 atagccgttt taaacgaaaa atttgaaaaa acaagcgaga ttgaacttcc agcaagttac
     5401 gctgaagtaa attcgcataa tttatattta tatgttaaaa gctaccttgc tggtataaga
     5461 gcaaattcag cccacactaa aggtcgctca gatgtaagtg gtggtggtaa aaagccttgg
     5521 agacaaaagg gtcgcggcgg tgctcgtgct ggttcaacta gaactaacgt atgggtaggc
     5581 ggtgcagttg catttggtcc aaaaaacaac agaaattatg atcaaaaagt taataaaaaa
     5641 caaaaaagac ttgctcttga gtttgcttta aatgacaaag ttgcaaacgg caaatttttt
     5701 gcggttgata gcatagaaat atcaagcggc aagacaaaag atgcagcatc tatcatcaat
     5761 aaactcggtg taagagatgc acttatcatc aaaaatgaac ttgatgcaaa aacactttta
     5821 gcatttagaa atttagcaaa ttgctacgtt atagatgcta gcgaagtaaa tgcatatttg
     5881 gtttcagttt atagtgcggt tatagctgaa aaagcagcac tacaatctat cgtaaaagag
     5941 ggctaaaaat ggcagatata acagatatca aaactatact ttatacagaa aagactcttg
     6001 gccttcaaga acaaggtgta gtggttatcc aaacttcacc aaaaatgact aaaaacggtc
     6061 taaaagaggt gctaagagag tattttggcg taacgccgct tagagtaaat tcattaagaa
     6121 tggacggaaa agttaagcgt tttaaaggaa gagtcggcgt aagaaacgac ttcaaaaaat
     6181 tctatgtaaa attaccagat ggcgttagcc tagaaaatgg ggaggcgtaa gatggctata
     6241 aaaagtttta aaccatatac tccaagcaga agatttatga caggtttgtc aagtgaagat
     6301 ataactgcta aaccaagcgt tagaagctta cttgtaaaaa ttccggctac cgcaggtaga
     6361 aatcacaatg gtagaatcac aagtcgtcat aaagaagcag gcgcaaaaaa actttaccgt
     6421 ataattgatt ttaaaagaaa gaaatttggt attcctggaa aagttgaaac tatcgagtat
     6481 gatccaaata gaaattgccg tatagctctt atatcttata gcgacggcga aaaaagatat
     6541 attattcgcc ctagcggttt aaatgtaggt gatgttataa gctcagctga aagcggactt
     6601 gatataaaac caggtaatgc tatgaagtta aaaagtatcc ctgttggtac aatagttcat
     6661 aacatagagc ttaagccggg caaaggcgct caaatggcta gaagcgcagg tggttatgct
     6721 caacttatgg gtaaagaaga aaaatatgtt attttaagac tcccaagcgg tgagatgaga
     6781 caagttttag ctgagtgtat ggctacagtc ggcgttgttg gaaatgaaga ttgggcaaac
     6841 gtaactatcg gtaaagcagg tcgtaatcgt tatagaggaa ttcgccctca aactagaggt
     6901 tctgcgatga acccggtaga tcacccacac ggcggtggtg aaggtaagaa aaattcaggt
     6961 cgccatcctg ttactccatg gggcaaacca actaagggtg ctaaaactcg ccgcaaaaaa
     7021 gctagtgata gacttataat atcaagaagg aaaggtaaat aacgatggct agatcgctaa
     7081 aaaaaggtcc atttgtcgat gatcatgtta tgaaaaaagt tctagctgca aaagctgcta
     7141 atgacaataa gccgataaaa acttggtcaa gaagaagcat gataatacct gaaatgatag
     7201 gtttaacatt taacgttcat aacggtaagg gttttattcc ggtttatgta acagaaaatc
     7261 acataggtta taaactcggt gagttcgcac caacacgcac atttaagggt cataaaggct
     7321 ctgtgcaaaa gaaaataggt aagtaagggg aagttatgag tagagctatt attaaattca
     7381 taagactatc tccaacaaaa gctagactta tagcagatga agtacaagga atgaacgcag
     7441 agcttgcact tgcaagtttg agttttatgc ctaatcgcgg cgcaaaatat atcgcgagtg
     7501 ctatcagctc agctgtagct aatggcggat ttgagccaga agaggtagtt gtaaaaagtt
     7561 gtagagtaga tgctggtccg gttcttaaaa gatttagacc acgtgcaaga ggaagcgcta
     7621 gtagaattag aaaaccaact agccatattc ttgtagaagt atctaaacct gaaagtaagg
     7681 aagcataaaa tgggacaaaa agttaatcca ataggcctta gactaggtat caatagaaac
     7741 tgggagtcta gatggtttcc atcgaaagcg actttaccag aaaatatagg cgaagactat
     7801 aaaataagaa aattcctaaa aactaagtta tattatgctg gtgttagtca aattcttgtt
     7861 gaaagaacag ctaaaaaact tcgcgttacc gtagttgcgg ctcgtccagg aatcataata
     7921 ggtaaaaagg gcggagagat tgaaaatttg agatctgagg ttacaaaact tgtaaataaa
     7981 gatatcgcta tcaatatcaa agaagagaga aaagcaggaa gttcagctca attggcagca
     8041 gaaaacgtag ctatgcagct tgagcgtcgt gttgctttcc gtcgcgctat gaaaaaagtt
     8101 atccaaggtg cccaaaaagc tggtgccaaa ggtatcaaag tttcagttgc tggtcgttta
     8161 ggcggagctg aaatggctag aacagagtgg tatttggagg gtcgtgtgcc gcttcatacg
     8221 ctaagagcta gaatagatta cggctttgca gaagcccata ctacttatgg taacataggt
     8281 gttaaagttt ggatctttaa aggcgaagta cttcaaaaag gtattcaagc cgataaaaat
     8341 gaagatacat caccaaaaaa accaagacgt gctagaaggg gtaaatagtt atgttattac
     8401 caaaaagaac taaatatcgc aaaatgatga aaggtcgtaa ccgcggctat gcaacaagag
     8461 gagtagatct tgctttgggt gagtttggac taaaggctgt tgaagccggt agagtaaatt
     8521 cacgtcagat agaatcggct cgtcaagcat atactcgtca tgtgaaaaga caagctaaaa
     8581 cttggatcag agtttttcca gataaaccta ttactaaaaa acctcttgaa actcgtatgg
     8641 gtaaaggtaa aggcggtgtt gaagagtggg ttatgaatat aaaacctggt agaattatat
     8701 ttgaaatgtc tggagttagt gaagagcttg ctcgtgaggc tttaactctt gcaatgcaca
     8761 agctaccatt taagactaag tttgtaacta aagagagcga aaatgaagta tattgatata
     8821 agtgcaaaaa gtatgagcga acttaacgct ttattaaaag agaaaaaggt gcttttattt
     8881 acacttagac aaaagctaaa aactatgcag ctaactaacc caaacgagat cggcgagact
     8941 aaaaaagata tcgctagaat taacactgca attagtgctg cgaaataagg ggcgaacaat
     9001 ggcagtagaa atgaaaagac aaattcaagg cgttgtcgtt gcaaaggctg gtgataagac
     9061 ggcgactatt cttgttgaaa gaagagttat gcacccaaga tatcacaaat ttgtaaaacg
     9121 ctttaaaaaa tacctagttc atgatgaaaa aaatgaacta aaagcaggag atactatatc
     9181 tgctgttgag tgcagaccac taagtgctag aaaaagcttc cgcttacaag cggttttgaa
     9241 aacaggagtt gaataatgat acaaagtttt acaagactag cagtagctga taacagtggc
     9301 gcaaaagagc ttatgtgtat aaaagtttta ggcggtagca aaagaagata tgcaagcctc
     9361 ggcgatatca tcgtttgctc agtaaaaaaa gctctaccaa acggtaaaat aaaaaaaggt
     9421 caagtagtta aagcagtagt agttagaacg aaaaaagagg tccaaagagc aaatggatca
     9481 cttattagat ttgacgaaaa tgcagccgtt atacttgata ataaaaaaga gccagtaggc
     9541 actcgtatat ttggcccagt tggtagagaa gtaagatatg caaactttat gaagattgta
     9601 tctcttgcac cggaggttct ataatggcag ttaaatataa aattaaaaaa ggcgatgaag
     9661 taaaagtaat cgcaggtgat gataaaggta aagttgcaaa agttattgcg gttttgccaa
     9721 aaaaaggtca ggtaatagtt gagggtgtta aggttgctaa aaaggcggtt aaaccgaccg
     9781 agaaaaatcc aaatggtgga tttattagca aagagatgcc tattgacatt tcaaatgttg
     9841 caaaagttga gggataagta tgagactaaa agcaaaatat aatgagagca ttaaaccggc
     9901 tctaacaaaa gagtttgata taaaaaaccc tatgcttatc ccggcaattg agaaaattgt
     9961 tatcagcgtt ggagcaggcg agggcgcaaa agatcaaaaa ttacttcaaa atatggctga
    10021 tacgatatct ttgatagctg gtcaaaaagc agttgtaaca aacgctaaaa aatcagtagc
    10081 tggatttaag gttcgcgagg gctatcctgt aggtatcaaa gtcactctaa gaaaagagca
    10141 aatgtataca tttttagata aacttgtaag cgttgcttta ccaagagtta aagacttccg
    10201 tggtcttcca agagatggat ttgatggtcg tggaaactac aattttggtt taaatgaaca
    10261 attaatgttc ccagaagtag tatatgatca aattttaaga acacatggta tgaatataac
    10321 tatagttaca acagcgggtg atgacaaaca agcattcaaa ttacttgaat tgttcggcat
    10381 tccatttgca aaaggaaagt aatatggcaa aaaaatcaat gatagcaaaa gcagcacgca
    10441 aacctaaatt tagcgcgcgc ggatatacta gatgtcaaat ttgtggtcgt ccacactctg
    10501 tttataaaga ttttggaatt tgccgtgtgt gcctaagaaa aatggctaac gaaggactaa
    10561 tacctggtct taaaaaagca agttggtaag ggaagcaaga tgataaatga cttaatttca
    10621 gatggactaa cacgcattag aaacgctagc atgagaagac ttgatacaac aaaacttctt
    10681 cattcaaatg ttgttgaagc aactttgaaa attttagcca ataaaagcta tatagagagt
    10741 tataacgttg ttgaagaggg aaataaaaag tttattaacg tagttttaaa atatgacgag
    10801 cgtggaagaa gtgttataaa tgaattaaaa agagtttcaa aaccaggtcg tagagtttat
    10861 caaggtagag atgagatcaa aagatttaaa aacggttacg gaactatcat agtaagcaca
    10921 agcaaaggtg ttctaagcaa cgacgaagcc cacaaagcag gtgtcggcgg cgaagtactt
    10981 tgcacagttt ggtaagagtt gaattagcct tttaaatttg tagtattaaa tttaaaaaag
    11041 gctaaatctt ttttatggca ttgggtatcc attcgtttta tgtagaaata ccctagacaa
    11101 ataaaaaagg aaaaagatgt caagaattgg aaaacaaccg atatctatcc caaatggttt
    11161 agatgttagt ttaaaaggta gtgttttggt ttttaaaaaa ggcaacaaca ctaaagagct
    11221 agatactaaa ggtaatgtta atatcgaagt taaagacgga aatatcatat ttacaagtaa
    11281 aggcgatgat agacaaagca gggcttattg gggaacttat agagctttag cgaacaacgt
    11341 tgttgttggt ctaactactg gatttacaaa acaacttgag ataaacggtg tcggttataa
    11401 agcagctgca aaaggtaaag ttttagagct tgcgctcggt ttttctcacc ctataaatta
    11461 tgaacttcca gaaggcatag agataagcgt ggaaaaaaat attatcacta tcaaaggaag
    11521 cgataaacaa gttgttggtc aagtagcagc agaagttaga ggatttagac cgccagaacc
    11581 atataaaggt aaaggtgtta aatacgtcga agagcgcata atccgcaaag ccggcaaaac
    11641 atctaagaaa taagggtaag taatggtagc aaatgtatta aaaagaaaaa tatctctaag
    11701 aattaagaga aaaagaagaa tcagagctaa aattagcggt acaccgtctt gcccgagaat
    11761 ctcaatcttc aaatcaaata gaactatata tgttcaagcg atcgaagata ttaatgcaac
    11821 aactctttgt gcaagtgatg gtaggaagct tggtataaag gcaaacaaat ctggagcagc
    11881 agttttggct aaagatatcg caggtaagct aagtgcaaaa ggtataaacg aagcagtatt
    11941 tgatagaaac ggctatctat atcatggcgt tgttgcggct tttgctgaag ctttaagaga
    12001 aaatggcatt aagctataac gcaaggattg ttgatggaaa agtataatag agaagaattt
    12061 gaagaagtaa tcgtcgacat cggtcgcgtt acaaaagttg ttaagggcgg tagaagattt
    12121 agatttacgg ctcttgtggt agtaggcgat aaaaaaggtc gtgtaggttt tggttttgga
    12181 aaagctaaag aagttccaga cgctatgaaa aaagcggttg atgacgcttt taaaaacata
    12241 gttgaagtaa aactaaaagg cagtacgatt cctcatgata ttgaagttaa atttaacgca
    12301 agtagaatct tgctaaaacc ggctagtgaa ggtaccggag ttatcgccgg tggtggcgca
    12361 cgtcctgttg tagagcttgc aggtataaaa aatatactta caaaatcact tggttcaaac
    12421 aactctgcaa atgttgttcg cgctacaatt aaagcgctta gtatgctaaa aggttaagga
    12481 gagagcatgg gactagaaaa tttacaaaaa gctaatggct caactcgcaa tactaaaaga
    12541 atcggtcgtg gtcaaggtag cggttggggt aaaaccgcta caaagggcgg taaaggtcaa
    12601 accgctagaa aaggttataa tgaaaaaaga ggttttgaag gcggacaaca accgcttcaa
    12661 agaagacttc caaaagtcgg ctttgcttct aaatttgtaa aaccttatgc cataaacgta
    12721 gataaaaatg aaggtattaa aactttaagc gaaattacgc ttgatagcct taaaacagtt
    12781 cataaatttt caaatagcat caaaaaagtt aagcttattg gtgcgggtgc taaagattta
    12841 gcaagcaaaa taaaagacga gaacataacc gttactggaa ataactaatg aataaaacat
    12901 taatcaacaa gatacttatt acgcttggat ttttgtttgc ttacagagtg ctggcttatg
    12961 tgccagtacc tggcgtcaat gttgatgtca taaaagaatt ctttacttca aatagtaaca
    13021 atgccttagg attatttaat atgtttagtg gtagagcagc tgaacgtttg agtattattt
    13081 cactgggtat tatgccttat atcacaagtt cgattattat ggagttatta gcagccacat
    13141 tccctactct tggaaagatg aaaaaagagc gtgacggtat gcaaaaatat atgcaaatca
    13201 tccgttacgc aactatagtt ataactatta tccaagctat aggagtgagt ataggtttgc
    13261 aaagccttac tggacgaggc ggcgagcaag ctattatgat agatataaat ctatttatag
    13321 ctataagttg tatctctatg ctaagcggaa ctatgcttct tatgtggata ggtgagcaga
    13381 taactcaaag aggtatcggt aacggtataa gccttattat atttgctggt atagtaagtg
    13441 gaattcctag tgctattggc ggaactataa atttagtaaa taccggagag atgaactttt
    13501 tagttgttat tggtatagct cttgttatac ttataacagt aggaatagta atctttgtag
    13561 agatgggtga aagacgtgtt ccgatctcat actcaagaaa aacggtaatg caaaaccaaa
    13621 ataagagaat aatgaactac attccgatta aagtaaattt aagcggtgtt attcctccta
    13681 tctttgctag tgcgattctt atgttcccgg gcacgatttt gcaagcaagc acaaatgagt
    13741 ttatactagc tataaacgac tttttaaatc caaatagcta ctttttcaac tttttaacat
    13801 ttttgtttat tctatttttt gcatattttt acgcatctat tacgtttaat gcaaaagata
    13861 tcagcgagaa tttaaaaagg caaggcggat ttatcccagg agtcagaccg ggcgagagta
    13921 cggctacata tcttaacgag gttgctagca gacttacttt aaccggatct gtttatctag
    13981 gacttatctc aacacttcct tggattttgg ttaaatttat gggagtaccg ttttattttg
    14041 gcggaacaag tgttcttata gtcgtttcag tagcgcttga cacgatgaga aaaatagagg
    14101 ctcaaattta catgaataaa tatcaaacat taagtgcggt tggactttaa tatggggata
    14161 tctattaaaa atgcaaagga tctagaacaa ctaagagcgg caaataaaat tgtcgctaat
    14221 actcttgatt atctgcataa ctatataaag cctggaattt ctttgttgga aattgataaa
    14281 atttgcgaag atatgataag aagtgccggt gcaaaaccgg ctttcaaagg gctttacggt
    14341 tttccaaatg cagcttgcat aagcgtaaat gaagtggtta tccatggtat tccaaatgaa
    14401 tataaactaa aagagggcga catagtaagt gtggatatcg gctcaaattt aaaaggatat
    14461 ttcggcgata gtgctagaac atatccagtc ggtaaaatct cagttactga tgaagctttg
    14521 atagcttgca gtaaagatgc tctttatttt gcgattgagt atataaaatc cggaatgcat
    14581 tttaaagaga tttgctatga gcttgaaaat tttatattaa atcgaggatt tgttccatta
    14641 aagggttttt gcggtcatgg tataggaaaa cgccctcacg aagagccaga aattccaaat
    14701 tatcttgagg gaaataatcc aaaaagcgga ccaaagatca gaaatggaat ggttttttgc
    14761 atagagccta tgatatgtca aaaagacggt acaccagtta tcgcagatga taaatggact
    14821 gtgacgagca aagatggtct tagaactagc cattatgagc attgtttagc gataatagac
    14881 ggtaaagcag agattttaag tcaaatttaa agtttttaac tttgtctttt ttgactatgt
    14941 tgtgttggtt tttaaattta gtcaatcact gatgttaagt ttgcatcact ctaaatttaa
    15001 aaatcgcctt gcttggtaaa aataccttat tttaggtatt taattaaatt tactcaatac
    15061 ttaaagcgtg agcaaaagcg aacggacttt agtatttggt tctttagtac gaatttattc
    15121 gtacgctaaa agaacatcaa aatagaaagg agaaaatatt ggcaaaagat gatgtcatag
    15181 agatcgatgg caatgtagtt gaagctctac caaatgcgac ttttaaagtc gaacttgaca
    15241 acaagcatat aatactttgt cacatagccg gtaagatgcg tatgcattat attaagatta
    15301 tgccggggga tcgcgttaaa gttgaactta cgccttatag ccttgataag ggcaggataa
    15361 catataggta taagtaatat taaagctaaa tttagataaa atccaacttt ttgcaactaa
    15421 ctgtgtgaag aagtgttttc aaaattaacc actattttga aaacagttgg tttgagattt
    15481 cgtcaaaacc taagtgcagt tgaataaaag tggtaataaa tttttaggag actaagatga
    15541 aagttcgtcc ttctgttaag aagatgtgtg acaaatgtaa aattgtcaaa cgcaaaggca
    15601 tagttcatgt tatttgcgag aatccaaaac ataaacaaag acaaggataa ggtatggctc
    15661 gtatagcagg tgttgattta ccaaagaaaa aaagagttga gtatggcctt acctatatct
    15721 acggtatagg cttatttact tcaagaaaga ttcttaatgc tgttggaatc tcttatgata
    15781 aaagagttta tgagttaagc gaagatgaag ctgctgctat tcgtaaagag atccaagaac
    15841 actatatggt tgaaggtgat cttagaaaaa gcgttgcaat ggatatcaaa gcacttatgg
    15901 atttaggtag ctatagaggc ttaagacaca gaaaaggtct tcctgttcgc ggtcaaaaaa
    15961 caaagactaa cgcaagaaca agaaaaggca gacgtaaaac tgtcggcgcg gctacaaagt
    16021 aaggatagaa aatggcaaaa agaaaagtaa ttaagaaaaa aatcgttaga aaaaatatag
    16081 caaaaggtat cgtttatatc tctgctacat tcaacaacac aatggttaca gtgactgatg
    16141 aaatgggaaa tgctatagca tggagcagtg ccggcggtct tggctttaaa ggtagtaaaa
    16201 aatctactcc ttacgcagct caacaagcag ttgaagacgc tatgaataaa gcaaaagagc
    16261 atggtatcaa agaagttggt atcaaagttc aaggaccagg aagcggtaga gaaacagcag
    16321 ttaagagtat tggcggagtt gagggtatta aggtattgta tctaaaagat ataactccac
    16381 ttgctcacaa cggttgtaga ccaccaaaac gccgccgcgt gtaatgttag atagaattta
    16441 ggagaattat aatggcaaga tatagaggac cagttgaaaa attagaaaga cgcctaggtg
    16501 tatctcttgc actaaaaggt gaaagaagac tagctggtaa aagcgcgtta gataaaagac
    16561 catacgcacc cggtcaacac ggacaaagaa aaacaaaaat tagcgaatat ggtttacaat
    16621 taagagaaaa acaaaaagct aaatttatgt acggcgttag cgaaaaacaa ttcagaagat
    16681 tgttttctga agctgctaga agagagggca acaccggagc tcttcttata ggtcttttag
    16741 agcaaagact tgataacgta gtttatagaa tgggatttgc tacaactaga agattcgcaa
    16801 gacaacttgt aactcacgga catattttag taaatggtaa aaaggttgat atcccttcat
    16861 atagagttac tgccggagag aaaatcgaag tcgcagaaaa aagtaaaact aatccacaga
    16921 ttgtaagagc aatagaactt acaaatcaaa ctggtatagt tgcttgggtt gatgtagaaa
    16981 aagataaaaa atatggaatt ttcacaagga ttccagaacg tgaagaagtg gtcattccag
    17041 ttgaggaaag atatatagta gagctttact caaaatagta ggaggcgatt atgaaaaaaa
    17101 ttacaacatc agcttatatg ccaactgaga ttgaggttgt taatgtgagt gagaatgtag
    17161 ctaagattat agcatatccg tttgagacag gctacgctgt aactttggct catccgcttc
    17221 gccgattact ttatactagc acggttggat ttgctccgac tgctgttaag atagatggcg
    17281 tagctcatga atttgatagt atgcgcggta tgcttgaaga tgttacgcta tttattataa
    17341 atttaaaaaa cttacgtttt aagctcaaaa atgactcaaa acgtgaagtc atagagtata
    17401 gctttaaagg gccaaaagag ataaccggaa ttgatttaaa caatgatata gttgagattg
    17461 taaatccgga ttcttacctt gctaccataa acgaagatgc tgagcttaag tttagcctta
    17521 tagtagaaaa aggtattgga tatgtgccta gcgaagagat cagggattat atagatagcg
    17581 agtatatagc gcttgatgct ttctttactc ctgttaaaaa agcggtttat gagatagaaa
    17641 atgttttggt tgaagacaat ccagactatg aaaagatcgt tttaacagtg acaacagatg
    17701 gtcaagtaag tcctatagaa gcgtttaaac actcaataga ggctatgtac aagcagatgt
    17761 ctatatttaa taatgttcta aatatagatg taaatatggc attaacttca agtcaaaact
    17821 caaatgagca ttcaaaattg cttgaaagcg ttgagaattt aaatttaagt gctagaagtt
    17881 ttaactgtct tgacaaagcc gatatacgct atataggcga gcttgctctt atggaagaga
    17941 gtgagttgaa agatctcaaa aatttaggta aaaaatctct tgatgagata aaagctgtaa
    18001 tggcagaaat cggctatccg tttggtgaaa atacattagg tgatagtaaa gaagcgctca
    18061 gaaaaaagat atctgagtta aaatcataag aagcgaagga atatataatg agacataatc
    18121 acggatatag aaaactagga cgcactagct ctcaccgtgc agctttgctt aaaaacctta
    18181 cgatagctat cgttaaggct ggtaagatag aaacaacgtt accaaaagca aaagagctaa
    18241 gaggctatgt agaaaaactt ataacaagag ctagaaaggg tgattttaac gcccataaat
    18301 ttgtttttgc acatttgcaa gacaaagaag ctacaaatat gcttgttact gaaatagccc
    18361 caaaatatgc tacaagaaac ggcggataca ctcgtatcat caaaactcgc gttagaaaag
    18421 gcgacgcagc cgagatggct tatatagagt tagtagccca ataactagta gtcttgtttt
    18481 gccaagaatt ttcttggcaa acctttttaa atttaaaaag gcttcttaat tattttatta
    18541 taaatcaaaa ttttattcaa atttattaaa cattctaaaa tttaaaacga tattttattt
    18601 aaagataatt catgtttatt agcctaaaca gataagttct gttttagtcc tttagtgata
    18661 taataagcta aaaataaaga ggaattttat gataccattt agcgatgaag agctgttaga
    18721 accggttaaa gaaagcttaa aagttattat gcctatgcta gaacaagatg gcggcggcat
    18781 ggagcttctt gggatcaaaa atggagttgt atatgttaga cttactgggc attgtcatgg
    18841 atgtgcagct agttcacaga cgttgaaata cggcgtagaa agacagctaa aagtagatat
    18901 tcatccagaa ctcagtgtag ttaatatacc aataggagag gaatttgaac tctaaaaatt
    18961 acaaagatct aggtataaaa ctttttaagg cttctaaatt cgatgaagca aaatcatact
    19021 tttcactagc ttatgaagat aaaagtagcg aagagttgtt agccctcatt gatctatgtg
    19081 aggtcgcaaa atcaagcggt caagaggctt tgtcgttgtt tgaaatttat ataaatacgg
    19141 ctaaagataa tcaacaagat aatataaacg agattataaa tatacttcaa agtggaaata
    19201 tgcagaactt aaaagagtta gattatgaaa atgctataac atacgcggat tttaaaaatc
    19261 tcttaaaagg caaggatttt aaagatatat ttcaaagcgt tatgttctcg actaaaatta
    19321 ttatagcaga taaagaggat ttgcttgagt ttgtcactaa gcttatagat aatggatatg
    19381 acgagatggg gcttaattat cttgagagtt cagctgttat gtttgccgga gatattcgca
    19441 tagaacagat gttaaacaag cttaggaata aaaatgaaaa tcttgttaaa tgacggaaat
    19501 tttataaccg ataactccaa aacatgtgaa agcggatgct tttttctcaa atcaaattct
    19561 aatgctaaat ttgaaaatga tgcgataaag agcggagcta ttatcataac tcctaagaga
    19621 gcaaaaacta ttttaaattt agatgatgga atacgattaa tcggtatcac cggtacaaac
    19681 ggtaaaacta caaccgcgtt tgctattgct tttggactta ggtctcttgg atataaagtc
    19741 gggataagcg gcacaagggg cgcatttata tgcgataaac aaatagcaga taaaggtctc
    19801 acaacaagtc aaattctaga aaccctaagc tatataaagc aggcaaaaga gtccggatgt
    19861 agatattttg taatggaggt aagttcgcac gccatagctc aaaatcgtat agaagggctt
    19921 aattttgctc ttaaagtttt tactaattta agtcaagatc atttagatta tcacaaaagt
    19981 tttagtgagt atgctagagt aaaatcaagt ttttttgatg atgattctcc taagcttata
    20041 aacggtgatg acgagagtat taaatttaat cataaaaata ctatgattta ttggcttaaa
    20101 aatagcgacg caagtttttt cgtagaaaat tatgatttta aaggcggtat aaaagctaat
    20161 ataaaaagca aaaatgaaac ggcaaatttg caaagtcatt tacaaggcaa atttaatctt
    20221 tataatcttt tggctgcgat cgggtccatt aagtttttaa gcagagttag cttgcaagag
    20281 gctgctgact ctgtgcgcaa atttgaaagc gtggcaggta gagtcgagat agttagtaaa
    20341 aatccgcttg ttatcgtcga ttttgctcat actccagatg gaatagaaaa agttttagat
    20401 gctttaagtc acgatgagct tgtagtagtt tttggcgcag gtggagatag agataaaaca
    20461 aaacgtccta taatgggtaa aatagtacaa aaatacgcat cgatatctat agtcacaagc
    20521 gataatccca gaacagaaga tccaaattca ataatcgacg atatactagc tggtatgcag
    20581 ataaataaca gcgttttttc tatagaaaat agaaaagatg caataaaaaa agccatagaa
    20641 ctagcagccg gtaaaacagt agtagtactt ggtaaaggcg atgaacctta tcaagaaata
    20701 agcggtaaaa agtatccgtt tagcgataaa ttagtcgttc aagaaatttt aagtgctatt
    20761 taaaccaaaa aaaggaatta aaatggaaat agagatgtta tatagcaaaa ttcacagagc
    20821 cacggtcaca gatgcaaatt taaactacgt aggatcgata actatagacg agagacttat
    20881 gaaagcggca aatttactcg agtttcaaaa ggttgaaatt ttagatatta acaacggtga
    20941 gagatttcaa acatatgtta taaaaggtga aaaaaaaggt gaaatttgct tgaacggagc
    21001 agcagctaga aaagtatgta taggtgatat aataatcata gtaagctacg cgtcgatgaa
    21061 gcgtaaaaaa gcaaaaaact tctctcctac gatagttcac gtaaatgaaa aaaacgaaat
    21121 taacgaatga aacggtacaa tgcaagcttc ccaaattgga ttttagatgc aaaatatact
    21181 ataagttcta cttgggctat ttaaatttaa aaataatcta gttttaaatt tggatcgcct
    21241 aggtttatac cctatactct tcatttaaga taataaattt agtcttaatt tgatatatta
    21301 aaatatttaa gtatttataa aacttttaaa tttgtataga ctaaaataat cctattttta
    21361 aaaaaaaata aaaatttata aatg
//
LOCUS       DAPPKW010000019        21266 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.019, whole genome shotgun sequence.
ACCESSION   DAPPKW010000019 DAPPKW010000000
VERSION     DAPPKW010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21266)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21266)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21266
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.019"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            124..1656
                     /gene="guaA"
                     /locus_tag="RPW04_000695"
     CDS             124..1656
                     /gene="guaA"
                     /locus_tag="RPW04_000695"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDX6294801.1"
                     /translation="MKNADILVLDFGSQYTQLIARRLREQGVYAELMPFNVSIEAIKA
                     KNPKGIILSGGPASVYAKDAYFCDEGVFTLGLPVLGICYGMQLLAHKNGADVAPAGHK
                     EYGKANLNIVKKCDFFKGVPDTSVVWMSHSDKVNELPQGFEVLANSENSEFCVFANLD
                     KKLYALQFHPEVAHSEFGDSMLKNFAKICGCESTWNMGSFAKKEVQAIREKVGNDKVL
                     CAVSGGVDSSVVAALLAHAIPDNLIVVFVDNGLLRTNEAKQVEEMFKLKLGVNLISID
                     ASELFLSRLKGVRDPEKKRKIIGETFIEVFDKEAKKHSNVKYLAQGTLYTDVIESSVV
                     GSSKTIKSHHNVGGLPEWMEFELIEPLREIFKDEVRRLGLELGLSRDIVYRHPFPGPG
                     LAIRIMGEVNTSSLELLRKADVILREELKSSGWYDKTWQAFCVLLNVNSVGVMGDNRT
                     YENAVCLRVVDASDGMTASFSRLPYDLLENCSRRIINEVDGINRVVYDISSKPPATIE
                     WE"
     gene            1671..2144
                     /locus_tag="RPW04_000696"
     CDS             1671..2144
                     /locus_tag="RPW04_000696"
                     /EC_number="3.2.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-deoxyinosine glycosylase"
                     /protein_id="HDX6294802.1"
                     /translation="MPTHPFKPVFDSRSKILILGSFPSVKSREMGFYYAHSQNRFWKV
                     LIALFGSEHLRNVQDKIDFLLKHQVAIHDAAYSCSVKGSSDNSISSVKPANLDLIFEN
                     ADIKAVFANGNTSYAICKKFYNFEVIKLPSTSPANAKFSLEKLVDEWKIILKYLE"
     gene            2149..2784
                     /locus_tag="RPW04_000697"
     CDS             2149..2784
                     /locus_tag="RPW04_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDX6294803.1"
                     /translation="MIYLVSNTPYNLDEVINLKVCEVVFYKFNLNLNDFDAAVFTSKN
                     GVNALKFNNIKCENLDIFAISNSTAQACKEFGFKRIFEGFNAHGNEFAKEIYPCLRGK
                     KVLYISAKDTVSGLSSFLQSNGVDINTLIAYENRLLKLNLKKPEDGSIIIFTSPKNVE
                     GFLSNFSWNDSYKAIAIGKTTAKALDFVTEAIISPTQQISECVNIAKSYKI"
     gene            3041..4288
                     /gene="purD"
                     /locus_tag="RPW04_000698"
     CDS             3041..4288
                     /gene="purD"
                     /locus_tag="RPW04_000698"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009294275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDX6294804.1"
                     /translation="MNILIIGSGGREYAIALRLKQDENVKNIYFSPGNGATTKIGQNI
                     ITKDFHELAQFAKSNNIDLTIVGPENALSAGVVDIFKQNGLNIFGPSKAAAMLESSKA
                     YMKEFLAKNCIRTAKFINTDSYDEASKFIDSLSSTVVVKADGLCAGKGVIIAKNHEEA
                     KKAVLDMLSGESFGDAGKRIIVEEFLDGFELSFFAICDGENFVSLPVAQDHKRLLDND
                     KGPNTGGMGAYAPSPLADAKLIKRVEDEIVHTTLKGMQEEGAPFCGVLFVGLMIVNNT
                     PYVLEFNVRFGDPECEVLMPLIDGNLSQILLDAATKKLTNISLKNSVAIAVVLASKNY
                     PYSSSQKAKIIVEHVPDGTHIDYAGVSSNGDELYADGGRVLVAVAVGQDIKEAHKKAY
                     ELVKNIKFDGMQYRKDIAYQALK"
     gene            4285..4740
                     /locus_tag="RPW04_000699"
     CDS             4285..4740
                     /locus_tag="RPW04_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HDX6294805.1"
                     /translation="MSENLLDKLDRENIEVASINKRLWAYCADEILISLLFMLAYYNA
                     LAKASDDIEALMLMISNMVFQIALLRVIYQTFFIWYYGATPGKMIFKIICIDTVMLSK
                     PSLQASFLRAVVRVLSEWLFYLGFVWALSNQARQTWHDKLAKTVVCNAY"
     gene            4760..6916
                     /locus_tag="RPW04_000700"
     CDS             4760..6916
                     /locus_tag="RPW04_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HDX6294806.1"
                     /translation="MFVSFLFARVENIEFLADSVEKNGNIVNANGNVLLYSQNYLVTA
                     DRAIYDQKSEIVELFGNVNMLRGDSETSRSNYVMINLKTNDLNFDGSFAMDKNKEIWI
                     QSDESCSTEETYFASKSIVSSCNVQDPDWHINFSSGELDKQSKFMHLYNPVFYIKDTP
                     VFYMPYFGFSTDKTRRTGFLSPQIAYSKSNGVMYLQPFYIAIADEWDLEFDPQIRTNR
                     GSGIYSTFRFADSPYSGGLIRSGIFNEKNSYKEKENLKNTNHTGFEVQYDRDRLVKYL
                     IDGDFTEGLWLRYTKLNDIDYLNLRGKKNGDYDSLVQSKLNYFITTDENYFGAYAKYY
                     IDTAKISSKYGNDDTLQELPKLQYHSFTSTFIVPNLIYSFDAKYHNYTRSIGTRASQY
                     EIDFPVGLNFNILDDYANFSITENIYATHIAYKNNRLYANGEFIDDNFNDYINHYHKF
                     LIETDLAKAYNNFYHTINLKLDYIKPGYSNGNIENNLLKYYMIDQSGNNIKLTDSNLF
                     EENFVSGLDKKYSKESTTADFVQFFYGSDGQKFLRHSIKQGFNIDDSDFENLENRLNL
                     YFGNFNFANKIEYSHIDNSLAKIQSGTSYANSRFNVALWHTYDKNSDNKLIYDKESYL
                     SSSLSINLPRNYRFFAGFDYDVQRSYTKMWRTGINYKRKCWDYSLVYQEDIEPKNTSA
                     GLESKKSQGFYLYFSFYPLGGVGYDFSIEQNNEAKQ"
     gene            6913..7593
                     /locus_tag="RPW04_000701"
     CDS             6913..7593
                     /locus_tag="RPW04_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HDX6294807.1"
                     /translation="MISPDDLKFENELDAAEKLLDILPKNELIDNDFVVVGSSLDSVV
                     LTDKVASSLQLSYELLFSEQILAPNNPECEIGMVSETEEIVVNDELIKAFNISLDFIY
                     GEAHRKYEEKILKNVYRYRKGKLLGDLKGKNILLIDEGCQTGATALVCIKTLINLEAR
                     SIVYATPLMPLNIVPYLNTLVDSIFCVKKIANFVDVDFYYKDKISPSSEAIMSILEDS
                     PYYLPLQK"
     gene            7603..9789
                     /locus_tag="RPW04_000702"
     CDS             7603..9789
                     /locus_tag="RPW04_000702"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDX6294808.1"
                     /translation="MQCSIEVNNQIEIFDLNKVAKQAAGAVLMRVKNTVVLAAVARED
                     AQVEEDFLPLTVQYIEKQYAAGRIPGGYVKRETKPGDFETLTSRIIDRSLRPLFPKGY
                     AYPTQIVVMVLSSDPEVDLQVVSLNAASVALYLSDIPVNSPVCGVRVGHINGKFVINP
                     SNSELKNSALDLYVAGVKDELLMIEMRSLPNEQNEIVPVIAIDPMMDPSLNEGFVSRQ
                     KMNEFSEDLMIDAIKLATEAILKGSNAYEEAFRNYKKETANLEYKPEIENENVAIYIN
                     EFYKEDVKAAINQMAKSERASELSKIAKQIALSEVAQKEGWDEALISNILGKYKKKLV
                     RTGIIKDKKRADGRGLKDVRPISIETNILPNAHGSCLFTRGQTQALVVTTLGTDNDAQ
                     MSEYLTEKNAVADKFMFNYNFPGFSVGEASPLKAPGRRELGHGNLAKRALYPSIDLNS
                     PYSLRVVSEILESNGSSSMASVCGGSLSLRAAGVETIKLVAGVAMGLVFEGDEHAVLT
                     DIMGLEDHDGDMDFKVAGSKDGITALQMDIKLGGISLDVLKEALYQAKEARDHILNLM
                     VKADEEIVVNEDVLPKLELFSVDPSKIVDIIGQAGKTIKEIIEKFEVSIDLDRDKGEV
                     KIAGGERQKVEAAKDYIIQITQKEQRSGGFRNKREYKNVTPFNIGDEFEGEIKKMAAF
                     GAFISLRDGVDGLLHISKIVSPLKEGDTIKVKVSDIKGGKISLDLN"
     gene            9811..10659
                     /locus_tag="RPW04_000703"
     CDS             9811..10659
                     /locus_tag="RPW04_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDX6294809.1"
                     /translation="MEIKKLFFPIGGGDNFEDRLYGALLVSKALKTHISFLASQMDFS
                     LVCNLEMALNRGNIFSTFKDTVISELDDEKKRNYEIFSSLCDKLGITISDKPVAGVPT
                     AEFHTKEGVRSKVVEYEAKFCDMIVAACPPEGEPTATFDSAVIKSGKNAIVIPRTLTE
                     FKADNILIGWNGTSSISRAITQSMFLLKNSKKVHIIVTNKYFQNEQTIEKDILEYLSF
                     HGINATFEVVKTTSVPGEALLQNALNGKFDMVIASSYGENGLKEMYLGGTTKYFLQNT
                     PIPVFM"
     gene            complement(10685..11044)
                     /locus_tag="RPW04_000704"
     CDS             complement(10685..11044)
                     /locus_tag="RPW04_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HDX6294810.1"
                     /translation="MPCIFEKIVAGEIPSNKVLENDKFLAFHDINPKAPVHILIIPKK
                     HYENFQVMDPSLMEEMTKFIQEVAATIGVDKTGYRLVTNCGENGGQEVMHLHFHLLGG
                     TILKWTDSHSNDPKDSF"
     gene            11172..12164
                     /gene="pheS"
                     /locus_tag="RPW04_000705"
     CDS             11172..12164
                     /gene="pheS"
                     /locus_tag="RPW04_000705"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004322161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDX6294811.1"
                     /translation="MQEIIDKIDQALSLDELEKIRVELFGKKGIITNEFAKLKDIPSD
                     EKKAFAENLNIKRDTLTVHINDKKSILEKEFIKAKMRASAVDITLFNEPLNTGALHPV
                     MDTMDRIIEYFVAQNFSIESGPLIEDDFHNFEALNLPKYHPARDMQDTFYLKDFRLLR
                     THTSPVQVRTMLNNKPPIRMIAPGAVFRRDLDLTHTPMFHQVEGLVVEDEGSVSFSNL
                     KYILEDFLRYMFGEVKVRFRPSFFPFTEPSTEADISCIFCGSKGCRVCKQTGWLEVLG
                     SGVVDPNVFKAVGYKNVSGYAFGLGVERFAMLLHQIPDLRSLFEGDIRLLEQFK"
     gene            12161..14497
                     /locus_tag="RPW04_000706"
     CDS             12161..14497
                     /locus_tag="RPW04_000706"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDX6294812.1"
                     /translation="MIISKNWLNEWVDVSHISTETICDKLNSIGLEVDSLKSIAAPKK
                     VVVGQVRTCVEHENSDHLHVCEVDVGTEVLQIVCGAKNVASGQFVACALVGAIMPNGL
                     EIKSAKLRGVASFGMLCSSSELGLAKINDGIIILDDSIGELILGKELREYPIFNDDII
                     EIDLTPNRGDCLSINGVARDLSVALDIPMRDRTPREEDEKLLGIGRILSIHCDEKIDG
                     SFLYRAIELKNNFEISLKTDLRLALIDCSKTNSIQKVLEYVTHATGVLFRVYDYHKIA
                     KDDEDKINIDIKIEANGSYGVYSDGKCLGQAGIWQTDEARLDECSRVIIIEASYTEPD
                     VIASAIGGDKKQPKDDATYRSSRGSEPKLSIGMDLLFDLFSKNKKIAPYAGAQQILLE
                     KEQTIVSFNCPEICNMIGSEISRNDVIKILKKLGFDITFNVEQEQIYARVPFYRHDIR
                     NTHDICEEIVRIIGIDNIPSTPLIFSEKNRINPTFESYKHSKDLRHKAAMAGFFECVH
                     YIFDNAEELEALGFKPSRTEILNPINNELAVLKPTLINHLLNSCERNVKNSKRSVRLF
                     EFGDVFDETGIQGSKFGFIASGLINEPTLLNGAKPAEIDFFTFANLIQDIIGKIELKN
                     GKNIVFLSEFEQASIYKNGNYIGYIGRLDLNLELKRDLPKTYVCELDFDKIKFSAKMA
                     KNYSKFPSISRDLSFIVPKDIPYIEIKNCIENLNILTLKEFLPVDLYSDETLADKVSL
                     SVKFTFQDMQKTLEDEEIADTIDKILAALNDKLGIGLR"
     gene            14494..15771
                     /gene="aroA"
                     /locus_tag="RPW04_000707"
     CDS             14494..15771
                     /gene="aroA"
                     /locus_tag="RPW04_000707"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDX6294813.1"
                     /translation="MIVEALNNPFDAEFNKVSSDKSISHRCAIFSLLSDKVSKISNYL
                     EAEDTMNSLKIIEKLGAKVEFKNGVYLITPPKKIVSPNAILECGNSGTAMRIFMGLLA
                     GCDGFFVLSGDKYLNERPMKRVASPLMQIGAKIDGRDCANKAPLAIRGGELNYFAYNS
                     SVASAQVKTALILAGLCSAGCKFKEPELSRDHSERMLLGMGAQISQSGLEIEVKPLKG
                     AYLKPLILDVPNDPSSCFFYAVAAAIIPGSKIIIKNILLNKTRIEAYKVLEKMGAKIT
                     YTKTSSTYEDIGDICVQYSELKSVDVNQNISWLIDEAPALAIAFACANGVSTLKNAKE
                     LRVKECDRIAITVAALKKCGIEAVELEDGFSIKGGKPNSATIDSHGDHRIAMSFAILG
                     LKCGMNIEKSEFIATSFPKFSYFLRELGARVED"
     gene            15761..16600
                     /locus_tag="RPW04_000708"
     CDS             15761..16600
                     /locus_tag="RPW04_000708"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HDX6294814.1"
                     /translation="MKIELAKSYGFCFGVKRAIKIAENSKNASTIGELIHNSLEIDRL
                     KNNFNVKTLKDISELKNEKKAIIRTHGITKEGLANLKSRDVEIIDATCPFVTKPQQIV
                     EKMSSEGYEIVFFGDINHPEVKGVMSYSSKNVYVILDESELETVKLPSKIAVVSQTTK
                     KIEKFTKIVSYLMQRVKEVRVFNTICNATLENQEAVRELSSRADVMVIIGGKNSSNTK
                     QLYLISKNLCPDSYLIESENELELKWFQNKKLCGISAGASTPEWVIQNVINKLENLTH
                     KDS"
     gene            16701..18374
                     /locus_tag="RPW04_000709"
     CDS             16701..18374
                     /locus_tag="RPW04_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004322168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDX6294815.1"
                     /translation="MAEVNKIVRNDMSDKIDVEEDFAAMFEESLKAEESTICDGVIVN
                     IKDDEVFVDVRKKSEGVMNISEITDDGGSLLYNIGDTIKVAITGSRNGRPIVSHKKAL
                     RKEKVKTFIDNFDENAENIYDIKIISKNKGGFVAISEDGIEFFMPKSQSGFRDSNQVM
                     NKTFKAKVLKVDKNDQSIIVSRKKLLDEDRRKRKEAIANIIDNTDIIEGTIKKITTYG
                     MFVDVGGIDGLVHYSEISYKGPVNPNTLYKEGDKVDVKIIKYDNDKKHLSLSIKAATP
                     DPWDEIKDGLEVGDTIKVIVSNIEPYGAFVDLGNDIEGFLHISEISWDKNIKNPKDFI
                     KENEELDVEVIEIDVNERRLRVSLKNLLPKPFDEFSSKFKEGDIVKGVVTTLTNFGAF
                     VRVGALEGLLHNEDSSWDRNDKCKDILKTGDEIDVKIIKIDDKNQKISLSQKDLKDSP
                     VTQYAKVHSVGDIVTGTVRDIKDFGIFVSLEGNVDALIRKEDIGSLDPLTLKAGDKIE
                     AAIAFIDEKKNRIRLSVKRLARQKEREVLNEINDDDKMTLGDIIKEQLA"
     gene            18388..18855
                     /locus_tag="RPW04_000710"
     CDS             18388..18855
                     /locus_tag="RPW04_000710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294816.1"
                     /translation="MNSLFIVFIILLLLVLSGGALLWKFSQVGAPHTTAVQNISNDLG
                     YSYKEAGNWFEKIAAFTKNDSILPTNLMFIEINDNAKFDQSQKYFELVIDRCDFYSVF
                     CITRVANEFKVNLTIVKKGDDAIIHLNTDDKKAAQDIVSNLKKYNIHSKIKED"
     gene            18859..20436
                     /locus_tag="RPW04_000711"
     CDS             18859..20436
                     /locus_tag="RPW04_000711"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDX6294817.1"
                     /translation="MKTVIVCDAIHPVGFELLNAQSDLRVIDAVDLPKDKLLDILPQA
                     DVAITRSSTDCGDKFIAACKNLKALVRAGVGVDNVDIDGCSKKGIIVMNVPTANTIAA
                     VEMTMCHLLNSARKYINSVNDLQQNRTWKREKWYGNELYGKTLGVIGFGNIGSRVAFR
                     SLAFGMKVIAYDPYIDPSKATDMGVTYTMNFDDILVCDFITIHTPKNKETVDMIGDEE
                     ISKMKNGVRLINCARGGLYNEDSLLRGLQSGKISYAGIDVFVKEPAINHPLLDLENVS
                     ATPHLGANTYESQKNIAIAAAEQAISAAKGICYPNALNLPIKTEDLPPFVAPYVELIS
                     KMSYFGAQLNKKPIKAIRIEAEGSIAEYANSMLTFAIVGCLKETLGDTINYVNAKFKA
                     EEKGVEVSATTLPESGYKNKLTVKIITDKDATAISGTVFGETEQRIVNVNGFKTDFKP
                     KGRMIVFKNTDVPGVISSISSILAEEKINIADFRLGRDDNGFALAVILVDDDIKKDIL
                     AKLNALETCVWAEYAVL"
     gene            20451..21020
                     /gene="efp"
                     /locus_tag="RPW04_000712"
     CDS             20451..21020
                     /gene="efp"
                     /locus_tag="RPW04_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDX6294818.1"
                     /translation="MASYSMGDLKKGLKIELDGVPYKIVEYQHVKPGKGAAFVRVKIK
                     SFVNGKVLEKTFHAGDKCESPNLVEKEMQYLYDDGEFCQFMDVESYEQVAISDEDIGE
                     AKKWMIDGMMVQILFHNGKAIGVEVPQVVELKIVETQPNFKGDTQGSNKKPATLESGA
                     VVQIPFHVLEGEVIRVDTVRGEYIERANK"
     gene            complement(21052..21252)
                     /locus_tag="RPW04_000713"
                     /pseudo
     CDS             complement(21052..21252)
                     /locus_tag="RPW04_000713"
                     /inference="COORDINATES: protein motif:HMM:NF021758.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Rdx family protein"
BASE COUNT         7574 a         2881 c         4311 g         6500 t
ORIGIN      
        1 tatcgcaaga aactacttta gaaagtaaat aaccaaagtt tcaactcttt ttagatagaa
       61 ttgcgcagtt ttactataaa tactatgttt atggtttaat atttaaattt aggttggtaa
      121 ataatgaaaa atgcagatat attggttcta gactttggat cacaatacac tcaacttatc
      181 gctagaaggc ttagagagca aggcgtttat gctgagctta tgccttttaa tgtaagcatc
      241 gaagctataa aagcaaaaaa tccaaaaggt attattttaa gcggcggacc agctagcgtg
      301 tatgcaaaag atgcgtattt ttgcgatgaa ggcgtattta ctttaggact tccggttctt
      361 ggaatttgtt atggaatgca gcttttagcg cataaaaatg gagcagacgt agctccagca
      421 ggtcataaag agtatgggaa agcaaattta aatatagtta aaaagtgcga tttttttaaa
      481 ggagttccag atacaagtgt tgtgtggatg agtcattctg ataaagtaaa tgaacttccg
      541 caaggttttg aagtattagc aaattcggaa aatagcgagt tttgcgtatt tgcaaattta
      601 gataaaaaac tctatgcttt gcaatttcat ccagaagttg ctcactctga gttcggtgat
      661 agtatgctta aaaattttgc taaaatttgt ggatgcgaaa gtacttggaa tatgggaagt
      721 tttgcaaaaa aagaggttca agctatccgt gaaaaagtag gaaacgacaa ggttttatgc
      781 gcagtaagtg gcggtgtcga tagctctgtt gtagccgcgc ttttagctca cgcgataccg
      841 gataatttaa tagtagtttt tgtagataac ggtcttctta gaacaaacga agcaaagcaa
      901 gttgaagaga tgtttaagct aaaattagga gtaaatttaa taagcataga tgcaagcgag
      961 ctatttctaa gtagattaaa aggtgtaaga gatcctgaga aaaagcgtaa aattataggt
     1021 gagactttta tagaggtgtt tgataaagag gcaaaaaaac actctaatgt aaaatacctt
     1081 gcccagggta ctttatacac ggatgttata gaaagcagtg ttgtaggatc tagtaaaact
     1141 ataaaaagcc atcataatgt aggcggactt cctgagtgga tggaatttga actaatcgaa
     1201 cctttaagag aaatttttaa agatgaagta agacgtcttg gacttgagtt aggacttagt
     1261 agagatatag tttatcgtca tccttttccg ggtccagggc ttgctatacg cattatggga
     1321 gaggtaaata cttctagttt ggagcttctt agaaaggctg atgtaatact aagagaagag
     1381 ttgaaaagca gcggctggta cgataaaact tggcaagcat tttgtgtact tctaaatgta
     1441 aattcagtcg gagttatggg agataataga acatacgaaa acgcagtttg cttaagagtg
     1501 gtggatgcaa gcgatggcat gacggcaagt ttttctaggc ttccgtatga tctgttggaa
     1561 aattgcagcc gccgcattat aaatgaagtc gatggcataa accgcgtagt ttatgatatc
     1621 agctcaaaac cgccagcaac tatagagtgg gaatagttct tagttttgca atgccgactc
     1681 acccatttaa accggttttt gatagcagat caaaaatact cattttaggc tcatttccat
     1741 cggtaaagtc tcgggaaatg ggcttttatt acgctcattc gcaaaataga ttttggaagg
     1801 ttttaatcgc gctttttggt tctgaacatt tacgaaacgt tcaagataaa atagactttt
     1861 tgcttaaaca tcaagtggcg attcacgacg cagcttatag ctgttcggta aaaggctcat
     1921 ctgataattc tatatcgagc gttaagccgg caaatttgga tctaattttt gaaaatgcag
     1981 atataaaggc tgtttttgca aacggaaata cgtcttatgc gatttgcaaa aaattttata
     2041 attttgaagt gataaaactt ccttccacta gccccgcaaa tgctaagttt agtttagaaa
     2101 aacttgtaga tgaatggaaa attatattaa agtatctgga gtaaaattat gatatattta
     2161 gtgtcaaata cgccatataa tcttgatgag gtgataaatt taaaagtatg cgaggtagta
     2221 ttttataaat ttaatttaaa tttaaatgat tttgacgcgg ctgtttttac cagtaaaaac
     2281 ggtgtaaatg cacttaaatt taataatata aaatgtgaaa atttagatat atttgccata
     2341 agcaattcaa ctgcgcaagc ttgtaaagag tttggtttta agaggatttt tgaaggtttt
     2401 aatgctcacg gaaacgaatt tgccaaagag atttaccctt gtttaagagg caaaaaagta
     2461 ctttatataa gcgcaaaaga tactgtttct ggtttgagta gttttttgca aagtaacggc
     2521 gtggatataa acactttgat agcttatgaa aatagacttt taaagttaaa tttaaaaaaa
     2581 cctgaagacg gatctatcat tattttcaca agtccaaaaa atgtagaagg atttttgagt
     2641 aattttagct ggaatgatag ctataaagct attgcgattg gtaaaactac ggctaaagcg
     2701 ttagacttcg ttactgaagc aattataagc cctactcagc agataagcga atgtgtaaat
     2761 attgcaaaaa gttacaaaat ataaaaatat tctttgattt ttaagctaaa cttttatata
     2821 attttataac ctggatggtt cgatagcgtt tttatgaggg tccaacacat tagtatgggc
     2881 ggaaaagtac gcaaatggtg tgatgcgatc tcgtttgtag ccatttttag cgagagattg
     2941 cgacctaaag tttgagtcta tctgcaaggt tggcttttta ttagggccga ttctactgcg
     3001 taacggccat ttgggttttt atttaaactc taggaaaaat atgaatattt taattatagg
     3061 aagcggtggc agagaatacg ccatagcgct tagattaaaa caagatgaaa atgttaaaaa
     3121 tatatacttt agccccggaa acggcgcaac aactaaaatc ggtcaaaata taatcacaaa
     3181 agattttcat gagttggcac aatttgctaa atcaaataat atagatttaa ctatagtcgg
     3241 acctgaaaat gctttaagcg caggagttgt tgatatattt aaacaaaacg gtttaaatat
     3301 ctttggtcct agcaaagcag cagcaatgct tgaaagctct aaagcgtata tgaaagagtt
     3361 tttggctaaa aactgtataa gaactgctaa atttattaat acagatagtt atgacgaagc
     3421 ttctaaattt atagatagct taagcagcac ggtagttgta aaagccgatg gattatgcgc
     3481 agggaaaggc gttataatag ctaaaaatca cgaagaagct aaaaaagccg tactagatat
     3541 gcttagcgga gaaagctttg gagatgccgg caaacgcatt atcgtagaag agtttttgga
     3601 tggttttgag ctctcgtttt ttgctatttg tgatggcgaa aatttcgtat ctttaccagt
     3661 agcgcaggat cacaaacgtc ttttagataa tgacaaaggt ccaaatacgg gaggaatggg
     3721 agcttatgcg ccaagtcctc ttgcagacgc taagcttata aaacgtgttg aagatgagat
     3781 agtgcatacg actttaaaag gtatgcaaga agaaggggca ccgttttgcg gagttttatt
     3841 tgtaggactt atgatagtaa ataatactcc ttatgttctt gagtttaacg taagattcgg
     3901 tgatcccgaa tgcgaggttc ttatgccttt gatagatggg aatttaagcc aaattctact
     3961 agacgccgca acaaaaaaat taacaaacat aagcctaaaa aatagtgtcg ctatagcagt
     4021 tgtgctagct agtaaaaatt atccgtatag ttcaagccaa aaggctaaaa tcatagtaga
     4081 acatgttcca gacggtaccc atatagatta cgccggagta agtagtaatg gtgatgaact
     4141 ttacgctgat ggcggcaggg ttttagtcgc tgtagcagta gggcaagata taaaagaggc
     4201 tcataaaaaa gcttatgaac ttgtaaagaa tattaaattt gacggtatgc aataccgcaa
     4261 agatatagcg tatcaggcac ttaaatgagt gaaaatttat tagataaatt agatagagaa
     4321 aatatagaag tagcaagcat aaataaaaga ctttgggctt actgcgcaga tgaaattctg
     4381 ataagtttgt tgttcatgtt agcgtactat aacgcgttag ctaaagcttc agatgatata
     4441 gaggctctca tgcttatgat atcaaatatg gtttttcaga ttgcactttt aagagttatt
     4501 tatcagacgt ttttcatctg gtactatggt gcgacccccg gaaaaatgat ctttaaaatc
     4561 atatgcatag atactgttat gctatctaag cctagtttgc aggctagttt tttaagagct
     4621 gttgtaagag tgcttagcga atggctgttt tatttaggat ttgtgtgggc tcttagcaat
     4681 caagctagac aaacttggca cgataagttg gctaaaacag tggtttgtaa tgcttattaa
     4741 gaaaatactt ttatcttttt tgtttgtttc ttttttgttt gcacgagtgg aaaatattga
     4801 atttttggct gatagtgttg aaaaaaacgg aaacatagtt aatgcaaacg gcaacgttct
     4861 tttatattct caaaattatt tggttactgc tgatagagct atatatgatc aaaaaagtga
     4921 aattgtagag ctttttggaa atgtaaatat gttaagaggc gatagcgaaa catcgcgttc
     4981 aaactatgtg atgataaatt taaaaacaaa tgatttgaat tttgacggta gttttgctat
     5041 ggataaaaat aaagagatct ggatacaaag cgatgaaagc tgtagtactg aagagacgta
     5101 ttttgcttct aaatctatcg tatctagttg caatgttcaa gatccagatt ggcatataaa
     5161 ttttagcagc ggtgagttag ataaacagag caaatttatg catctttata atcctgtttt
     5221 ttatataaaa gatacgcctg ttttttatat gccgtatttt ggattttcta ccgataaaac
     5281 tagaagaaca ggctttttgt cgcctcaaat agcatacagc aagagtaacg gagttatgta
     5341 cttacaaccg ttttatatag ctatagccga cgagtgggac ttggagtttg atccgcaaat
     5401 aagaacaaat agaggaagcg gtatttactc tacatttaga tttgcagatt cgccttattc
     5461 tggtggactt atcagaagcg gtatattcaa tgaaaaaaat agttataaag aaaaagagaa
     5521 tttaaaaaat acaaatcata cgggttttga agttcaatat gatagagata gattggtaaa
     5581 atatctaata gacggtgatt ttactgaagg tttatggctt agatatacaa agttaaatga
     5641 tatagattat cttaatttac gcggtaaaaa aaatggagat tatgattcgc ttgtgcagtc
     5701 taaattaaat tattttataa ctaccgacga aaattatttt ggtgcttatg caaaatacta
     5761 tatagacact gcaaaaatca gttcgaaata cggaaacgac gatactcttc aagagcttcc
     5821 aaagttacag tatcacagtt tcacatcaac ttttatagtg ccgaatttaa tatattcatt
     5881 tgatgctaaa tatcataatt atacaagaag tatcggaact agagcatctc aatacgagat
     5941 agattttcca gtcggtttaa attttaatat tttagatgat tacgcaaact tttcaataac
     6001 ggaaaatata tatgcgactc atatagcata taaaaataat agactttatg caaatggtga
     6061 gtttatagat gataatttta atgactacat aaaccattac cataaatttc ttatagaaac
     6121 agatttagca aaagcttata acaacttcta tcataccata aatttaaaac ttgattatat
     6181 aaaacccggt tattctaatg gaaatataga aaataattta ctaaaatact atatgataga
     6241 tcaaagtggt aataatataa aattaaccga ttcaaattta tttgaagaaa attttgtgag
     6301 cggacttgac aaaaaatata gcaaagaaag cactactgct gattttgtac agttttttta
     6361 tggctctgat ggacagaaat ttttaagaca tagtataaaa caaggattta atatagacga
     6421 cagtgatttt gaaaatttag aaaataggct gaatttatat tttggtaatt ttaattttgc
     6481 aaataagatt gagtattcac acatagataa tagtttggcg aaaattcaaa gcggaactag
     6541 ctacgcgaat tcacgtttta acgtcgcttt gtggcataca tacgataaaa atagcgacaa
     6601 taaattaatt tatgataaag agagttattt gagttcgtct ttgagtataa atttacctag
     6661 aaattataga ttttttgcgg gttttgacta tgacgttcaa agaagttata cgaagatgtg
     6721 gagaaccggt atcaattaca aaagaaaatg ctgggattat agtcttgtat atcaagaaga
     6781 tatagaaccg aaaaatacca gcgccggttt agagtccaaa aaaagtcaag ggttctatct
     6841 gtattttagt ttttatccat taggcggggt tggatatgac ttttctatag agcaaaataa
     6901 tgaggcgaaa cagtgataag tccagatgat cttaaatttg aaaatgagct tgacgccgct
     6961 gaaaagctac ttgatatact gccaaaaaac gagcttatag acaatgattt cgttgttgtt
     7021 ggatcatctt tagattctgt tgtattgaca gataaagtag cttcatcttt gcagttgagt
     7081 tatgagctac tttttagtga acaaatttta gcaccaaata atccagaatg cgagatagga
     7141 atggtgagcg aaactgaaga gatagtcgta aatgatgagc ttataaaagc ttttaatata
     7201 tctttggatt ttatatatgg agaggctcat agaaaatatg aagaaaaaat attaaaaaat
     7261 gtgtatagat atagaaaagg aaagttgtta ggtgatttaa aaggaaagaa tattttgctc
     7321 atagatgagg gttgccagac aggtgctacg gctttggtat gtataaaaac tcttataaat
     7381 ttagaagcta gatccattgt ttatgctaca cctcttatgc ctttgaatat agtgccatat
     7441 ctaaatacct tagtcgatag tatattttgt gttaaaaaga tagcgaattt tgttgacgtg
     7501 gatttttatt ataaagataa aatatccccc tcatcagaag ccattatgtc tattttagaa
     7561 gatagtccgt attacttacc attacaaaaa taaggagttt ttatgcagtg ttcaatagaa
     7621 gtaaataatc aaattgaaat ttttgatctt aataaggttg ccaaacaagc agccggcgca
     7681 gtgttaatgc gtgtaaaaaa tacagttgta ttagccgcgg ttgctagaga agatgctcaa
     7741 gtagaagagg attttttacc tcttaccgtg cagtatatag aaaaacaata cgccgctggt
     7801 agaataccag gaggatatgt caaaagagag actaaaccag gagattttga gacattaaca
     7861 agccgtatta tagatagaag tttaagacct ttattcccta aaggctatgc atatccgact
     7921 cagattgtcg taatggtttt aagtagcgat ccagaagtgg atttgcaagt agtgtcgcta
     7981 aatgctgcga gtgtagcttt atatcttagt gatattccgg ttaacagtcc ggtttgcggt
     8041 gttagggtag ggcatataaa cggtaaattt gttataaatc caagcaattc agagctaaaa
     8101 aactctgctc ttgatcttta cgtggcaggc gtaaaagatg aacttcttat gatagaaatg
     8161 agaagtttac ccaatgaaca aaatgaaatt gtaccagtca tcgctataga tcctatgatg
     8221 gatcctagtt taaatgaagg tttcgtttca agacaaaaaa tgaatgaatt tagtgaagat
     8281 cttatgatag atgctataaa attagctaca gaagctatat taaaaggaag caacgcatat
     8341 gaagaggcgt ttcgtaacta caaaaaagag actgcaaatt tagagtacaa gccagagata
     8401 gaaaatgaaa atgttgcgat atatataaat gaattttaca aagaagatgt aaaagcggct
     8461 ataaatcaaa tggctaaaag cgaaagagcg agtgagcttt ctaaaatagc taaacaaata
     8521 gctcttagtg aagttgctca aaaagagggc tgggatgaag ctcttatctc gaatatactt
     8581 ggaaaatata agaaaaagtt agttagaaca ggtattataa aagataaaaa aagagccgac
     8641 ggaagaggtc taaaagatgt taggccgatc agtatagaga cgaatatttt gccaaatgca
     8701 catggaagtt gtctatttac ccgcggtcaa actcaagctc ttgttgtaac tactttaggt
     8761 accgataatg atgctcaaat gagtgagtac ttgacagaaa aaaatgcagt tgccgataaa
     8821 tttatgttta attataattt tcctggattt agcgtaggtg aggcaagtcc tttaaaggct
     8881 cctggacgac gcgagttagg acatggaaat ttagcaaaaa gagctcttta tccaagtata
     8941 gatttaaata gtccgtactc gttaagagtt gttagcgaaa ttttagaaag taacggttca
     9001 agttctatgg ctagtgtatg tggcggctct ttgtcactta gagcagcagg agtcgaaacg
     9061 atcaagcttg tagccggagt agcgatgggg cttgtatttg aaggtgatga gcacgctgtt
     9121 ttaacagata taatggggct tgaagaccac gatggagata tggacttcaa ggtcgcaggc
     9181 tcaaaagacg gcatcaccgc tcttcagatg gatatcaaat taggcggaat tagtttagat
     9241 gtattaaaag aagcgctata ccaagcaaaa gaagctagag atcatatttt aaatttaatg
     9301 gttaaagcag atgaagaaat agtcgtgaat gaggatgttt taccaaagtt agagttattt
     9361 agcgtagatc ctagtaaaat agttgatata ataggacagg ccggaaaaac cataaaagag
     9421 attatagaaa aatttgaagt tagcatagat cttgacagag ataaaggcga agtaaagata
     9481 gccgggggag agagacaaaa ggtagaagct gctaaagatt atattataca aattacgcaa
     9541 aaagagcaga gaagcggcgg ttttaggaac aaaagagagt ataaaaacgt aactcctttt
     9601 aacataggtg atgagtttga aggcgaaatt aaaaaaatgg ctgcttttgg tgcatttata
     9661 tctttaagag atggagttga cgggctttta catatttcaa aaatagtttc acctttaaaa
     9721 gagggtgata cgataaaggt aaaagtttca gatattaaag gcggaaaaat atcattggat
     9781 cttaattaaa tttaataacg gaggtttatc atggagatta aaaaactgtt cttccctata
     9841 ggcggcggag ataattttga agatagatta tacggtgctt tgctagttag taaagcttta
     9901 aaaacacaca taagctttct tgcttctcag atggatttta gtctagtgtg caatcttgaa
     9961 atggctttaa atagaggaaa tatatttagc acttttaaag ataccgtaat ttcggaatta
    10021 gatgatgaga agaagagaaa ttatgagata tttagttctc tttgcgataa attaggtata
    10081 actatcagtg ataaacctgt agcaggcgta ccaactgccg agttccatac taaagaaggc
    10141 gttagaagta aagttgtaga gtatgaagcg aagttttgcg atatgatagt cgctgcttgt
    10201 ccgccagaag gagaacctac tgctactttt gattctgctg ttataaaaag tggaaaaaat
    10261 gcgatagtaa tcccaagaac tttaacagag tttaaagcag ataatatttt aatcggttgg
    10321 aatgggactt ctagtatatc aagagctata actcagtcta tgtttttact aaaaaattca
    10381 aaaaaagtac atattatagt tacaaataag tattttcaaa atgaacaaac catagaaaaa
    10441 gatattttag aatatctatc ttttcatggt atcaacgcta cttttgaagt cgtaaaaact
    10501 acatcggttc caggagaagc acttcttcaa aatgctttaa atggcaaatt cgatatggtt
    10561 atagcaagca gttatggtga aaatggattg aaagagatgt atcttggcgg aacaactaag
    10621 tacttcttgc aaaatactcc gattcctgtt tttatgtagt attaagagcc ttatggctct
    10681 tatatcaaaa actatctttt ggatcgtttg agtgactatc cgtccatttt aatatagttc
    10741 cgcctagtag atgaaaatgc aagtgcataa cttcttgtcc tccattttca ccacagtttg
    10801 taactagtct ataacctgtc ttatctacac cgatagtagc tgcaacttct tgaataaatt
    10861 tcgtcatttc ctccataagg ctaggatcca ttacttgaaa attttcatag tgcttctttg
    10921 gtatgataag tatatgtaca ggcgctttag gatttatatc gtggaatgcg agaaatttat
    10981 cattttcaag tactttattt gatggtattt caccggctac tattttttca aaaatgcaag
    11041 gcattgctat ctcctaattt aaatttaagc acaattatat ctaattattt gttaatttat
    11101 agatgctttt atagataatt taatcaattt tagggtacaa tgatagcgaa attttagaca
    11161 aggtaggtaa tttgcaagag ataattgata agatagatca agctttgagc cttgacgaac
    11221 ttgaaaaaat aagagttgaa cttttcggaa aaaaaggcat tataacgaac gaatttgcaa
    11281 agttaaaaga tattccttcg gatgaaaaaa aagcttttgc cgagaattta aatatcaaaa
    11341 gagatacttt aaccgttcat ataaatgata aaaaatctat tcttgaaaaa gaatttataa
    11401 aagctaaaat gcgagctagt gctgtagata tcacgctttt taacgagccg ttaaataccg
    11461 gtgcacttca tcctgttatg gatacgatgg ataggataat tgagtatttt gtagcgcaga
    11521 attttagcat agaaagcgga cctctcatcg aggatgattt tcataatttt gaagctttaa
    11581 atctcccaaa ataccaccca gcaagagata tgcaagatac gttttattta aaagatttta
    11641 gacttcttcg cactcacaca agtcctgttc aagtaagaac catgttgaat aataaaccgc
    11701 ctattcgtat gatagctccg ggagctgttt ttagacgcga tttagatcta actcatactc
    11761 ctatgtttca ccaagtagaa ggacttgttg tagaagatga agggagtgtc agcttttcaa
    11821 atttaaaata tattttagaa gattttttaa gatatatgtt tggagaggta aaagttagat
    11881 ttagacctag cttttttcca tttacagaac ctagcacaga ggctgatatt agctgtatat
    11941 tttgtggaag taaaggctgt agagtatgca agcagactgg ctggcttgag gtattaggaa
    12001 gtggcgttgt agatccaaat gtatttaaag ccgtaggata taaaaatgta agcggctatg
    12061 cgtttggtct tggagtagag agatttgcta tgttgcttca tcaaattcca gatttaagaa
    12121 gcctatttga gggtgatatc agacttttgg agcagtttaa atgataataa gtaaaaattg
    12181 gctaaatgag tgggtcgatg tttcccatat cagcacagaa acaatatgtg ataaattaaa
    12241 ttctataggc ttagaagttg atagtttaaa aagtattgct gctcctaaaa aagtggttgt
    12301 aggacaagtt agaacttgcg ttgaacatga aaatagcgac catttgcatg tttgcgaagt
    12361 agatgtcggt actgaagtgc ttcagatagt ttgtggagca aaaaatgtag cttcaggaca
    12421 gtttgtagct tgcgctttag tgggagctat catgcctaat ggacttgaga taaaatctgc
    12481 aaaattaaga ggagtagcaa gttttggaat gctgtgttct agtagcgagc ttggactagc
    12541 taagataaat gatggcataa taatccttga tgatagtatc ggcgagctta tattaggtaa
    12601 agagcttaga gagtatccta tatttaacga tgatattata gagattgatc ttacgccaaa
    12661 tagaggggat tgtcttagta taaacggtgt agcaagagac cttagcgttg ctttggatat
    12721 tcctatgaga gatagaactc ctagagaaga agatgagaaa cttcttggta taggtagaat
    12781 acttagcata cattgcgacg agaagatcga cggctcattt ttatataggg ctattgagct
    12841 taaaaataat tttgaaatta gcttaaaaac agatctcaga ttggctttaa tagattgttc
    12901 taaaacaaat tctatacaaa aagttttaga gtatgttact catgcgactg gagttttatt
    12961 tagagtttat gattatcata agatagcaaa agatgatgaa gataagataa atattgatat
    13021 aaagatagaa gcaaacggat cttacggcgt ttattccgac ggaaagtgtc ttggtcaagc
    13081 cggaatttgg caaacggacg aagctagact tgatgaatgc tcaagagtaa taataatcga
    13141 agcaagctat accgagccag atgtgatagc atctgctata ggaggcgata aaaagcagcc
    13201 aaaagacgat gctacttata ggtctagtag gggaagcgag ccaaaactca gcataggtat
    13261 ggatcttctt tttgatctat tttctaaaaa taaaaaaata gctccatatg caggagcgca
    13321 gcaaatttta cttgaaaaag agcagactat agtgagtttt aattgtcctg aaatttgcaa
    13381 tatgataggc agtgaaattt caagaaatga tgttattaag atacttaaaa agctcggttt
    13441 tgatataact tttaatgttg aacaagagca aatttatgca agagtgccat tttatcgtca
    13501 cgatatacgc aatactcatg atatttgtga agaaatagta aggataatag gtatcgataa
    13561 tataccttca actccgttga tatttagtga aaaaaacaga ataaatccta catttgaaag
    13621 ctataaacac tctaaagatc tacgtcataa agctgctatg gctggatttt ttgaatgcgt
    13681 acattatata tttgataacg ccgaagagct tgaggcgctt ggatttaaac caagtcgcac
    13741 tgaaatctta aatcctataa ataacgaatt agcagtctta aaacctactt tgataaatca
    13801 tcttttaaat tcatgcgaaa gaaatgttaa aaattcgaaa agatcagtaa ggctttttga
    13861 atttggagat gtatttgatg aaacaggtat tcaaggttct aaatttggat ttatagctag
    13921 cggtcttata aatgagccga ctcttttaaa tggtgcaaaa ccagccgaaa tcgacttttt
    13981 tacttttgca aatttgattc aagatataat cggaaaaata gagctaaaaa acggtaaaaa
    14041 tatagttttt ttaagcgaat tcgaacaagc atctatatat aaaaatggca attacatagg
    14101 ctatatagga agattagatc ttaacttaga gctaaaaaga gatctgccta aaacctatgt
    14161 ttgcgaactt gattttgata agatcaaatt tagtgcaaaa atggctaaaa attactctaa
    14221 atttccaagt ataagtaggg atttaagttt tatagttcct aaagatatac catatatcga
    14281 aattaaaaat tgcatagaaa acttaaatat acttacttta aaagagtttt tacctgttga
    14341 tttgtatagc gatgagactc ttgctgacaa agttagctta agtgttaaat ttacgtttca
    14401 agatatgcaa aaaacgcttg aagatgaaga aatagcagat acaatagata aaattttagc
    14461 tgctctaaac gataagctgg gcataggttt aagatgatag tagaagcgtt aaataatcca
    14521 tttgatgctg agtttaataa ggtttcgagc gataaatcta taagccatag atgtgctata
    14581 ttttcacttc ttagtgataa agtaagcaaa atcagtaatt atttagaagc cgaagatact
    14641 atgaactcat tgaaaattat agagaaactc ggtgctaaag tggagtttaa aaacggagtt
    14701 tatctcatta ctcctccaaa aaagattgtt tccccaaatg ctattttgga gtgcggcaac
    14761 tcgggtactg ctatgagaat ttttatggga cttttagcgg gatgcgatgg cttttttgtc
    14821 ttaagcggag ataaatattt aaatgagcgt ccgatgaaaa gagtagcttc tccattgatg
    14881 caaataggcg caaaaataga tggtagagac tgcgcaaata aagctccatt agcaattagg
    14941 ggcggagagc ttaattattt tgcatacaat agttcagttg cttcagctca agtaaaaacc
    15001 gctcttattt tagccgggct ttgctcggct ggttgcaaat ttaaagagcc tgaactaagt
    15061 agagatcata gtgagagaat gcttttagga atgggagctc aaatatctca aagcgggctt
    15121 gaaatagaag ttaaacctct aaagggagct tatttaaaac ctcttatttt agatgtgcct
    15181 aatgatccta gctcatgctt tttttacgcc gtagcagcgg ctataatccc cggctcgaag
    15241 ataattataa aaaatatttt gcttaataaa actcgcatag aagcgtacaa agtactagaa
    15301 aaaatgggcg ccaaaataac atatacaaaa actagtagca catatgaaga tataggcgat
    15361 atttgtgtac agtattcaga attaaaatcc gtagatgtaa atcaaaatat atcttggctt
    15421 atagatgaag cccccgctct tgctatagct tttgcatgtg ccaatggagt tagcacatta
    15481 aaaaatgcaa aagagctgcg tgtaaaagag tgtgatagga tagccataac cgtagctgca
    15541 ttaaaaaagt gcggtataga agcagttgaa ttagaagatg gatttagcat taaaggcggc
    15601 aaaccaaaca gtgctaccat agatagtcat ggggatcata ggatagctat gagttttgct
    15661 attttaggtt taaaatgtgg tatgaatata gaaaaaagtg agtttatagc aacgtctttt
    15721 cctaaattta gttatttttt aagagagttg ggagctagag ttgaagattg agttagctaa
    15781 aagttatgga ttttgcttcg gagtaaaaag agccataaaa atagccgaaa attcaaaaaa
    15841 tgcatctaca ataggtgagc ttatacataa tagccttgag attgatagac taaaaaataa
    15901 ttttaatgtt aaaacattaa aagatataag tgagcttaaa aatgaaaaaa aagctattat
    15961 aagaactcac ggtataacaa aagaaggttt ggcaaattta aaatcgcgcg acgtagagat
    16021 tatagatgca acttgtccat ttgttacaaa accacaacaa atagtagaaa aaatgagtag
    16081 cgaaggatat gagatagtat tttttggaga tataaatcac ccagaagtta aaggtgtgat
    16141 gagttactct agtaaaaatg tttatgtgat tttagatgaa agtgagcttg aaacagttaa
    16201 gcttccatca aaaatagcag tagtatctca aactaccaag aaaatagaaa aatttactaa
    16261 aattgtaagt tatttaatgc aaagagtaaa agaagtaagg gtttttaata ctatttgcaa
    16321 tgctacatta gaaaatcaag aagccgtaag agaactttca agtagagccg atgtgatggt
    16381 aatcataggc ggaaaaaatt catcaaatac aaaacagctg tatttaatat caaaaaatct
    16441 atgtccagat agttatctta tagaaagtga aaatgagctt gaattaaagt ggtttcaaaa
    16501 taaaaaatta tgcggtatca gcgcaggggc cagtacccct gaatgggtga tacaaaatgt
    16561 tataaataaa ctagaaaatt taactcataa agatagctaa ggttcatata gttaatgtaa
    16621 ttcaaagcta aaatgagata caatctgata cttgtagtca agagtgacac taaggaaaat
    16681 ctatagataa aaggaccaag atggctgagg tgaacaagat tgttcgtaat gacatgagcg
    16741 ataaaattga tgttgaggaa gattttgccg ctatgtttga ggagtcttta aaggctgaag
    16801 aaagtactat ttgtgatggt gtcatcgtta atataaaaga tgacgaggtt tttgttgatg
    16861 ttcgtaaaaa atcagaaggt gtgatgaata tatctgagat tacggatgac ggtggtagtt
    16921 tgctatataa tataggcgat acaatcaaag ttgctataac aggttcaaga aatggtagac
    16981 ctatagtttc tcataaaaaa gctcttagaa aagaaaaagt aaaaactttt attgacaatt
    17041 ttgatgaaaa tgctgagaat atttatgata ttaaaataat ctctaaaaac aaaggcggct
    17101 tcgtagctat aagcgaagat ggcattgaat tttttatgcc aaaatcacaa agtggcttta
    17161 gagattcaaa tcaagttatg aataaaacat ttaaggctaa ggttttaaaa gtagataaaa
    17221 atgatcaaag catcattgta tctcgtaaaa aattacttga tgaagataga agaaaacgca
    17281 aagaagctat agcaaatatc attgataata cagatattat tgaaggtaca atcaaaaaaa
    17341 tcacaactta tggtatgttt gttgatgtag gcggtataga tggtttagtt cattatagcg
    17401 aaatcagtta caaaggtccg gtaaatccaa acactcttta taaagagggt gataaagttg
    17461 acgttaagat tataaaatac gataacgata aaaaacatct ttcattatct ataaaagcag
    17521 ctactccaga tccttgggat gagataaaag atggtcttga agttggtgac actataaaag
    17581 ttatagttag caatatcgag ccttatggtg cttttgttga tttaggaaat gatatcgaag
    17641 gatttttgca tattagtgaa atttcttggg ataaaaatat aaaaaatcca aaagatttta
    17701 taaaagaaaa tgaagagtta gatgttgaag ttattgaaat tgatgtaaat gagagaagac
    17761 ttagagttag tcttaaaaat ttacttccaa agccgtttga cgagtttagt tctaaattta
    17821 aagaaggaga tatcgtaaaa ggtgttgtta cgactctaac aaattttgga gcattcgtac
    17881 gtgttggagc tcttgaaggt ctattgcata atgaagattc atcttgggat agaaatgata
    17941 aatgtaaaga tatactaaaa acaggcgatg aaatagatgt taagattata aaaatagatg
    18001 ataaaaatca aaagatatct cttagccaaa aagatttaaa agatagccct gtaacgcaat
    18061 atgctaaagt tcattcggtt ggagatatcg taactggtac tgtaagggat attaaagatt
    18121 ttggtatttt tgttagcctt gagggtaatg ttgatgctct tataagaaaa gaagatatcg
    18181 gttctcttga tcctcttaca ctaaaagccg gtgataaaat agaggctgcg atagctttca
    18241 tagatgagaa gaaaaataga attagattga gtgtaaaaag acttgctaga caaaaagagc
    18301 gagaagtttt aaacgaaata aatgatgatg ataaaatgac gctcggcgat attataaaag
    18361 agcagttagc ttaattcacc tatgagattg aatagtctct ttatagtatt tattatactt
    18421 ttactactcg ttttaagcgg cggagcactt ctttggaaat tttctcaagt aggagctcct
    18481 catacgaccg ctgtacaaaa cattagtaat gatttaggtt attcgtataa agaggctgga
    18541 aattggtttg aaaaaattgc cgcttttaca aagaacgact ctattttacc tacaaattta
    18601 atgtttatcg aaataaacga taatgctaaa tttgatcagt cacaaaaata ttttgaactt
    18661 gttatagata gatgtgattt ctactctgta ttttgtataa ctagagttgc taatgagttc
    18721 aaagtaaatt taaccatagt aaaaaagggt gacgatgcta ttatacatct caatacggac
    18781 gataaaaaag cagcacagga tatagtttca aatttaaaaa aatacaatat tcattctaag
    18841 ataaaggaag attgaattat gaaaacagtt atagtttgcg atgcaataca tccggttggt
    18901 tttgagctat taaatgcgca gagcgatttg cgtgtaattg atgcagtaga tctgcctaaa
    18961 gataaacttt tagatatttt acctcaggcc gatgtggcaa tcactagaag ttctactgat
    19021 tgcggtgata aatttatcgc ggcttgtaag aatttaaaag cgcttgttag ggctggagta
    19081 ggcgtagata atgtagatat agacggctgt tctaaaaaag ggattatcgt aatgaatgtc
    19141 cctacggcaa acactatagc cgcagttgaa atgactatgt gccacttatt aaatagtgca
    19201 agaaaatata taaattcagt taatgatttg cagcaaaaca gaacttggaa acgagaaaaa
    19261 tggtacggaa atgagctcta cggaaagact cttggcgtaa tcggatttgg aaatataggc
    19321 tcaagagtag cttttagaag tcttgctttt ggtatgaaag ttatagctta tgatccatat
    19381 atcgatccta gtaaagctac tgatatgggc gttacttata ctatgaattt cgatgatatt
    19441 ttagtatgtg attttattac tatccatact ccaaaaaata aagaaacagt agatatgatc
    19501 ggtgacgaag agatctctaa aatgaaaaat ggagttcgtt tgataaactg tgctagggga
    19561 ggactgtata acgaagattc gcttttaaga ggtttacaaa gcggaaagat atcttacgca
    19621 gggattgatg tatttgttaa agaacctgct ataaaccatc ctttgcttga tcttgaaaat
    19681 gtaagtgcta ctcctcatct cggtgcaaat acatacgaat ctcaaaaaaa tatagcgatt
    19741 gcggcagccg aacaagctat aagcgcagct aaaggaattt gttacccaaa tgcgctaaat
    19801 ttgcctatca aaacagaaga tttacctcct tttgttgctc cttatgtaga gcttatatct
    19861 aaaatgtcat actttggagc ccagttaaat aaaaaaccta taaaagctat taggatagag
    19921 gccgaaggat ctatcgcaga gtatgcaaat tcaatgctta cttttgctat agttggttgc
    19981 cttaaagaga ctttgggcga tactataaat tatgtaaatg ctaaatttaa agccgaagaa
    20041 aaaggcgtcg aagtatctgc aactacttta ccagaaagcg gatacaaaaa caaattaaca
    20101 gttaaaatca taacagataa agatgctact gccataagcg gaactgtttt tggcgagact
    20161 gaacaaagaa tagtaaatgt taatggattt aagactgatt ttaagccaaa aggcagaatg
    20221 atagtattta aaaatacaga tgtaccaggc gttatcagct ctatcagctc tatattggcc
    20281 gaagagaaaa taaatatagc agactttagg cttggtcgcg atgataatgg ttttgctttg
    20341 gcggttatat tagtcgacga tgatattaaa aaagatattt tagcaaagct aaatgcacta
    20401 gaaacttgtg tttgggctga atacgcagta ttataattta aggagaatat atggcttcat
    20461 attcaatggg tgatttaaaa aaaggtttaa agatagagtt agacggcgtt ccatataaaa
    20521 tagttgagta tcaacatgta aagccgggaa aaggcgccgc atttgttaga gtaaaaatta
    20581 agtcttttgt aaatggaaaa gttttagaaa aaacttttca tgcgggggat aaatgcgaat
    20641 ctccaaattt agtagaaaaa gagatgcaat acctttatga tgatggagaa ttttgtcaat
    20701 ttatggatgt tgagagctat gagcaagttg ctatatctga tgaagatatc ggcgaggcaa
    20761 aaaaatggat gatagatggg atgatggttc aaattttatt tcataacggt aaagctattg
    20821 gtgttgaagt acctcaagta gtggagttga aaattgttga aactcagcca aacttcaaag
    20881 gcgatactca aggaagtaat aaaaaaccag ccacattaga gagtggtgcc gtagttcaga
    20941 taccgtttca cgtattagaa ggcgaagtta ttcgcgttga taccgtgcga ggcgagtata
    21001 tagaaagagc aaacaaatag attaaaagcc ctatattagg gcttttagtt tttatatatt
    21061 aaattctttt tttataattt cagttacttc tccagcatct ggaaatctag gtcttggaaa
    21121 atcatgatta ttataaatca cctttccatc aacttcaact ataaaatcgc ctttgttgcc
    21181 tatctcttta gaaacttcca caccaggaaa attgtttatt agctcatctt ctaacctaga
    21241 agcttttgga cggaaatttc aagagt
//
LOCUS       DAPPKW010000020        21193 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.020, whole genome shotgun sequence.
ACCESSION   DAPPKW010000020 DAPPKW010000000
VERSION     DAPPKW010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21193)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21193)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21193
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.020"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..580
                     /locus_tag="RPW04_000714"
     CDS             <1..580
                     /locus_tag="RPW04_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010399559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRIC cation channel family protein"
                     /protein_id="HDX6294819.1"
                     /translation="ALSGFLFGIKRGCDWLGVFLAAFLTALGGGLMRDVIVGRPAYSF
                     THHMPVLIVIGVMFIAIFLKFHRENRNDLEKKFIFIMTDAVDVISFSIVGAIVSLEYG
                     LNVFGVVMVAFCNGVGGGILRDVLLNEVPWFLKTGLYGTISMSIGLIYYFMSLYGLTN
                     IYWIMALFALGVIFRLCAYYRKWNLPQIYYKE"
     gene            583..1746
                     /locus_tag="RPW04_000715"
     CDS             583..1746
                     /locus_tag="RPW04_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012013118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HDX6294820.1"
                     /translation="MLMGNYARVDLGFKKGKGAILWSLDGKDYVDFGSGIGVCSLGHS
                     NKKLAKTIKNQAKTLLHTSNIYKIKPQEKLADKMCDLLGEPYYLFFANSGAEANECAI
                     KLARKYGNSFEEKKYEIITLGNSFHGRTIATLKLTGQEKFHSKDFAPYPDAFKFFNTI
                     DEIIENLNDKTVAVMVELVQGEGGINPLNIAEIQKLAQILKERNILFITDEVQCGVYR
                     TGEFVTSQIYGVTPDIITFAKGLGGGVSIGACASKKDIFKAGDHGSTFGGNFLAMSAG
                     ITVLKEMKKLKKSGKLDEAIKEFKNNLDELVSNYSDVFRSRVGLGLMQGLILKNPENL
                     ASVFNKALEKRVLVLKSGKDTLRFLPPLNISKKEIKKGFKRLKNALNELNLER"
     gene            1747..2613
                     /locus_tag="RPW04_000716"
     CDS             1747..2613
                     /locus_tag="RPW04_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HDX6294821.1"
                     /translation="MKLLTHNLNGKDILAVLGADGSVIDISKANIYKKDMNELILTLN
                     NDEKTRLESLSHEIGGIKYENTVKRSPIIFPLQDIICLGINFMEHAVESYKFKKIEFD
                     GKREYPVYFSKRANEIVGDGGFIESHNDITSTLDYEVELAAIVGKDAKNISPDEVNKY
                     IFGYTILNDISSRDIQNRYKQWYYGKSLDGATLMGPWIVTDLDVANLKIESRINGELR
                     QSSNTNKMIFDINYVLSDLSKGMTIKAGSIISLGTPSGVGMGFTPPKYLKTQDMVECY
                     IEGIGTLTNIVK"
     gene            2688..3215
                     /gene="fliL"
                     /locus_tag="RPW04_000717"
     CDS             2688..3215
                     /gene="fliL"
                     /locus_tag="RPW04_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HDX6294822.1"
                     /translation="MADEAKTTEGGSKKSPVVLIAIVGVLVFLLIIGALVAFMLVGSS
                     SEQKMEANQAPNSTQQQAAPSPKQRSNDFFNVGPMYPMDQFLVNLLSESGSRFLKTTL
                     NLELSEQTLSPEIDKKKPLIRDIIIRTLSSKTYEDVSTSKGKERLKDELVTKINEILR
                     DGYIKNVYFTDFIVQ"
     gene            3212..3559
                     /locus_tag="RPW04_000718"
     CDS             3212..3559
                     /locus_tag="RPW04_000718"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HDX6294823.1"
                     /translation="MIGIDIVKIDRVTSAKSKFKSKFIYKFLLSSEVALVKNDASLAG
                     IWAAKEAASKALGCGIGAELSFLDIEIYKDKKGAPKLKFNENIVKKFNIKNTSLSITH
                     DGGFAIAAVIVEN"
     gene            complement(3556..4470)
                     /gene="cysK"
                     /locus_tag="RPW04_000719"
     CDS             complement(3556..4470)
                     /gene="cysK"
                     /locus_tag="RPW04_000719"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HDX6294824.1"
                     /translation="MKIANNVTELIGNTPLVRINKFGNDATILAKCEFLNPSHSVKDR
                     IALNMIRVGMSEGKINKNSVIIEPTSGNTGVGLAMVCAQLGLKMILTMPSSMSLERQK
                     LLKAFGANLVLTDPKYGMQGAVNEAIKIANETENSFIPSQFDNPANPAMHKNTTAIEI
                     LNDTNGKVDILVAGFGTGGTVSGIAEVLRAKNPNVKIIAVEPEKSPLLSKGEAGPHAI
                     QGIGANFIPKNLNRDVIDEFFTVSNEDAIATAKALAQNEGLLVGVSSGANVYAAKEVA
                     KRAENHGKTIVTILCDTGERYLSTTLYD"
     gene            complement(4481..4894)
                     /locus_tag="RPW04_000720"
     CDS             complement(4481..4894)
                     /locus_tag="RPW04_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HDX6294825.1"
                     /translation="MSLLSTKGVYGLMSMFEISKGDQKNPVSLKDISQNIGVSKNYLE
                     QVLNTLRNTGFVSSIKGLKGGYFLNKTLDEITFYDIFYALENDFGLTSLNVEHSSYNL
                     FFKEYNEKLTELFSKPLSSFKEYQSQDKKYLNYVI"
     gene            complement(4891..6162)
                     /locus_tag="RPW04_000721"
     CDS             complement(4891..6162)
                     /locus_tag="RPW04_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase"
                     /protein_id="HDX6294826.1"
                     /translation="MQKETLATHFGYNSKDGHGTMAVPIYQSTAYDFGSCETAANRFA
                     LKELGQIYSRLTNPTLDVFEARIAALEGAKAAISTSSGQAAIFYSIANLAEAGDNIIV
                     AQKIYGGATTLLTHTIKRFGIKAKIFDSDNADDLEALIDDKTKAIFFETLSNPQIAIS
                     NVDKIVQIANRHNVITIADNTVATPILFNPLKKGVDVVVHSASKYISGQGLSVAGAIA
                     SRDGLNDKLVGNPRYAHFNTPDESYHGLVYSDLKGMFDLFTLRIRLSLLRDIGATLSA
                     FNAFQLIQGLETLSIRIKEHSKNALKVAEFLEKHPKVKSVNYPGLASSKLNSYVKANF
                     TDGLASGLLSFDVGDGKTAAKILNNVKIFSVVVNIGDSKSIITHPASTTHQQLSKKEL
                     EDAGVSEGLIRLSIGLENADDLINDLKEAMQ"
     gene            6418..7752
                     /gene="hcp"
                     /locus_tag="RPW04_000722"
                     /gene_synonym="priS"
     CDS             6418..7752
                     /gene="hcp"
                     /locus_tag="RPW04_000722"
                     /gene_synonym="priS"
                     /EC_number="1.7.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxylamine reductase"
                     /protein_id="HDX6294827.1"
                     /translation="MSKQELEMFCHQCQMSALGGCGSKGQDSGTCGKDSTLARLQDMM
                     IFGLKGMSAYRHHANELGADTKKVDDIISKTLYFTLTNMNFNFDEHIAQLLEVGKAGV
                     EVMDALSGAHTTKFGVPTPVKVTQNKANGKAILVSGHNLHALKALLEQTAGKGINIYT
                     HSEMLPAHAYPELNKFSHLKGNLGKAWFDQTKLFNEFKGAILMTTNCIVPLRKNCEYA
                     DRLFGYDIAGSKGVTHINGDDFSPLIQKALSLPEISGFDSDDFIVTGHHYKAVLPMAT
                     EILEALNCGKIRRFFVIAGCDAPGNSRNYYRELALSLPKDCVILTSSCGKFRFNDVDF
                     GYIEGTKIPRYLDLGQCNDSNGAVKIATALSEATSIAINDLPITISLMWMEQKAIIIL
                     LALLYLGVKNIHIGPTLPEFINEEILNFLVDKFNIGLISGDAKADLMKYLGK"
     gene            7872..9302
                     /locus_tag="RPW04_000723"
     CDS             7872..9302
                     /locus_tag="RPW04_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDX6294828.1"
                     /translation="MEQVKYLLNHENISLMAIDDSIKVTNPATKEILAYVKKTDEASL
                     ADIIQNANLAFKSWSSALASFRSDILMKWYELVMQNRANLARLMTLEQGKSFNEASGE
                     IAYAASFIKWFAAQALRNDGDILTSVKKDEKLLVIKQPIGVCAAITPWNFPSAMITRK
                     AAPALGAGCSMIVKPASQTPLSAYALASLAYTAGIPKDLFVIVSGDAGMMSTAFANSK
                     IIRKISFTGSTEVGIKIYEKSAKTIKKLSLELGGNAPFIVFNDANLDKAVDGVMASKF
                     RNSGQTCVCANRIYAQSGIYDEFCAKLNIAIKSLKLGNGLENGVNQGPLIDENALKKV
                     EEHINDALKKGAKCLSGGKRSSLGGTFFEPTLLSGATKDMLVAREETFGPLCPVFKFQ
                     SDEEAIEAANDTDFGLASYIFTNDPKRQWNMSESLEYGMVGVNTGLISNEVAPFGGVK
                     FSGLGREGSRYGMDEYTEQKYICLNL"
     gene            9473..9796
                     /locus_tag="RPW04_000724"
     CDS             9473..9796
                     /locus_tag="RPW04_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009293722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294829.1"
                     /translation="MNDDKFKRVRYLRALEKFAKLVIRNLKREDFDTTKFDILVKKNT
                     QILEKIEPAYLDQPYTKSLCEFVNFALNSHDKTELLKAANNLDKLKNSRNYKKEKHKK
                     GNYDE"
     gene            9789..10406
                     /locus_tag="RPW04_000725"
     CDS             9789..10406
                     /locus_tag="RPW04_000725"
                     /inference="COORDINATES: protein motif:HMM:NF024811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HDX6294830.1"
                     /translation="MSNKCVIFDMDATLIDSKKAIYYTINYIRKELNMTPLDAEFIIK
                     TINDPLKNPIKEFYGIEQASGNMRHIFEEEFDKNYMLYATVYEEAMKVVSSCKNLDYK
                     LAVATNAPHATIESILKNCGILDSFDMIVGSNKEIPQKPDPTMLNLIRDSFKCECVFV
                     GDSAKDYLASKNAKMDYIQVLWGRNEIIKGAVNCRNATEVMKILR"
     gene            10556..11518
                     /locus_tag="RPW04_000726"
     CDS             10556..11518
                     /locus_tag="RPW04_000726"
                     /inference="COORDINATES: protein motif:HMM:NF015552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLAC1 anion channel family protein"
                     /protein_id="HDX6294831.1"
                     /translation="MDKSYFSYLPVSLFGSVMGLCGLSIGWKLAAFHFGFNGFMADIL
                     ALLAVLDFIILSICYAIKIIYKTQSFKDEFINPMTKSFFGTFIISILLLPIVIFEYFP
                     KIAFILWIAGVVLMLSFAIYMVSFWLSKSQDISHVTPAWVIPVVGTLDIPFAKNLFNF
                     NYLDDVSIAALGVGLFFAIPIFVIIKTKLLFSEPMPDKLIPTLMIILAPFSVGFSAYI
                     EVVKNVDIFAKGLYFIGLFLFFAMLPKLRNATKCCPFRVTWWAVSFPLAALLVSTIKM
                     AIELNELYLDILSVVFLITFTIAIFWLTYRTLKGVFSLELQNLT"
     gene            11705..13897
                     /locus_tag="RPW04_000727"
     CDS             11705..13897
                     /locus_tag="RPW04_000727"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDX6294832.1"
                     /translation="MADIIYTYTDEAPALATFSLFPVIKEFLNRANIDIQTVDISLSG
                     RILANFSEYLNDDQKVPNYLEILGEMTKEKSANIIKLPNISASLPQLNAAIAELQSKG
                     YAVPNYIENPTNDKEESIKARYARVLGSAVNPVLREGNSDRRCAGAVKAYAKEFPHKN
                     GAWDSSIKTRVAYMQDGDFYGNEKSIIAKNSCEFKIEFQNKFGETKLLKSGIKAGKGD
                     IISATFMSVKKLDEFINSTMQDAKDSSLLYSVHLKATMMKVSDPVIFGHFVKVFFEEI
                     FSEFESELKSAGIIANNGLKDLFSKIENLPIKDKILSKFQEIIQKNPDLAMVDSDKGI
                     TNLHVPSDVIIDASMPAMIRNSGKMWDKEGKTRDTLAVIPDRTYATIYEATIDDLKVN
                     GALNPAIIGSVSNVGLMAKKAEEYGSHDKTFIASESGKFILSSDSGEKMEFEVENGDI
                     FRAMQAKDEAIKDWIKLAVSRAKATNAPAIFWLDKNRAHDANMIQIVTDELKKYDISN
                     LDISIAEPTKAIKRSISIIRSGKDAISVTGNVLRDYLTDLFPILELGTSAKMLSIVPL
                     LNGGGLFETGAGGSAPKIAGQLIEENHLRWDSLGEFLALGASLEHLSNISGKKEAKIL
                     ADTLDKAIVSYLKNDNSPRKNVGENDNRGSHFYLSLYWADELSKSKLKDKFINIANAL
                     NENKNVIINELNGSQGHKVDVGGYYKFDDKLASDIMRPSKNFNNAIGK"
     gene            13899..14819
                     /locus_tag="RPW04_000728"
     CDS             13899..14819
                     /locus_tag="RPW04_000728"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDX6294833.1"
                     /translation="MKIAIIGAGNVGASCASLLISRKVCKKVTLIDINKNLAIAKAMD
                     LAQMAAVLNLDIDIFGGDNYELLKDFDIVVITAGFARKDGQSRDDLAMMNAKIVSHSS
                     KMVSKFAPKSIIIVVTNPLDIMVYVAFKESGFARHKVIGMAGELDSARFRYYMSQKLG
                     LNVAQCFGKCVGMHNNSMICLESSIKFKNQSICKDEFKKYFEDIKLNTKNGGSNIVKL
                     MGTSAFYAPAAGVVKMCECIQNDNDETLSCSVLDENLIPTGRLVKLNKNGVQKIFDLN
                     LTNEESKIMDKSISEFILVINKIYFSDNKN"
     gene            14914..16071
                     /gene="sucC"
                     /locus_tag="RPW04_000729"
     CDS             14914..16071
                     /gene="sucC"
                     /locus_tag="RPW04_000729"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDX6294834.1"
                     /translation="MNIHEFQAKELLRDFGINVADGIMVVSVDDALNAAKKLGGSVWA
                     VKAQIHAGGRGLGGGVKIAKSLDEVKEYASKILGMTLVTKQTGPEGKLVKKLYIEKGT
                     NIDKEYYLSLTFDRINECIAVIASADGGMNIEEVDHDKIITIRIDPQIGLRDFHSLAI
                     ADFLNLDKDLSVKLHVLLSKLYRLYWQTDSNLVEINPLVLTKENDLIPLDAKMGFDDS
                     ALFRQEKIANMRDIDEEEPSELEAKTYGLSYVKLDGNIGCMVNGAGLAMGTMDTINGV
                     GGKPANFLDVGGGANPQTVAKAFEIILRDKNVKSIFVNIFGGIVRCDRIANGILEATK
                     LTKVEVPVIVRLDGTNAKEAAEILKQANITNIISAPDLESGAKMSVELANK"
     gene            16081..16953
                     /gene="sucD"
                     /locus_tag="RPW04_000730"
     CDS             16081..16953
                     /gene="sucD"
                     /locus_tag="RPW04_000730"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDX6294835.1"
                     /translation="MSILVDKNTKVIVQGFTGKEATFHAEQCLAYGTNIVGGVTPFKG
                     GMIHLGKPVFDTVVEAVKSTNATVSLIFVPAKFVAASIIEAADAGIELAVVITEHTPV
                     RDMLEAKNYANKKGMKLIGPNCPGIISADQAKLGIMPAMVFKRAGVNIGLISKSGTLT
                     YEGANQILSEGYGISTAVGIGGDSVIGLTYSELLPMFENDPDTKAIVMIGEIGGSLEI
                     EACNIIKNMKKPVVAFIAGQSAPKGKRMGHAGAIISGEDSTAAGKMKALSAAGAHVVA
                     SPAHIGKKIKELIG"
     gene            16963..17271
                     /locus_tag="RPW04_000731"
     CDS             16963..17271
                     /locus_tag="RPW04_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012001805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HDX6294836.1"
                     /translation="MMIEQPVGIAVWVDESRCKACDICVSYCPAGVLGMKEDIHAVQG
                     MMIEVVHPESCIGCRDCELHCPDFAIYVAEKGFKFAKISPEAKERAVAVKANHFRKLK
                     "
     gene            17283..18404
                     /locus_tag="RPW04_000732"
     CDS             17283..18404
                     /locus_tag="RPW04_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate synthase subunit alpha"
                     /protein_id="HDX6294837.1"
                     /translation="MRELITTGNSLAARAAVECGCNFFGGYPITPSSEIAHELSVLLP
                     KKGGKFIQMEDEIAGVSVALGASMSGAKAMTASSGPGISLKSEQIGLGFIAEVPLVIA
                     NVMRGGPSTGLPTRVAQGDILQAKTPSHGDYCSIAVAPGSLSEIYTETVRAFNLANRF
                     STPVFLLLDETIGHMQGKANVPDIADLKIEPRREFKGDPKDYNPYEAAADEPATLNSF
                     FKGYRYHITGLHHGPTGFPTEDGKMVDYNIKRLFNKIHAHLDEVLNYEEYKLDDAEIC
                     VICYGSVSLAAKEAVDKLREDGVKVGIFRPITIWPSPEAKLKEVCSKFKKILVAELNM
                     GQYLGEIQRCSLRDDFKTLLKANGRPISPTEIINKVKEF"
     gene            18406..19251
                     /locus_tag="RPW04_000733"
     CDS             18406..19251
                     /locus_tag="RPW04_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002947889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HDX6294838.1"
                     /translation="MAFNYDNYLRTNKMPTLWCWGCGDGVILKSVIRAIDTMGWNMND
                     VCVVSGIGCSGRFSSYVNCNTVHTTHGRAIAYATGIKLANPEKHVIVVTGDGDGLAIG
                     GNHTIHGCRRNIDINHILINNFIYGLTNSQTSPTTPQGFWTVTAQWGNIDPNFDAAKL
                     ATAAGATFVGRETVINPSRIEKLLVEGFKHEGYSFFDIFSNCHINLGRKNKMGEATQT
                     INWIDGRTVSKTKFDALSDEEKLGKFPTGVLHKDDSHIEYCKAYEKVIEAAQNKTKIN
                     FEEIK"
     gene            19248..19799
                     /locus_tag="RPW04_000734"
     CDS             19248..19799
                     /locus_tag="RPW04_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase family
                     protein"
                     /protein_id="HDX6294839.1"
                     /translation="MSSAELRFVGVGGQGVILAGEILSAAKIEAGGYGVKASTYTSQV
                     RGGPTKVDIILSDEEIRYPYANEGEIQFMLATAQNSYDTFKSGVKEGGIIVVEPNLVK
                     PSEEDKKRWKIYEIPIISIAKDEVGNVITQSVVALGVAVKFTGVMDAEIVRKEMLSTV
                     PDKVKEANNKAYDLGMAYASKCL"
     gene            complement(19872..20120)
                     /locus_tag="RPW04_000735"
     CDS             complement(19872..20120)
                     /locus_tag="RPW04_000735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294840.1"
                     /translation="MILGVFGYFLRELNFSMATTILGYVLCGIMEDSLRRAFAISGGK
                     IDIFFKGEINLALWLLVAIVIFTPFTAKIISKKYKLKR"
     gene            complement(20217..20558)
                     /locus_tag="RPW04_000736"
     CDS             complement(20217..20558)
                     /locus_tag="RPW04_000736"
                     /inference="COORDINATES: protein motif:HMM:NF014073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HDX6294841.1"
                     /translation="MLCGLYYGAEFGGRILSIPLNVLGDAGAVFTTLDGYRMAKNGFA
                     DPALAISGIASFISGSIAVIGLTFFTSILSSIAIRIKSLTGVIIGILIAVVGVDSTTG
                     ILRFTFNEPEL"
     gene            complement(20751..>21193)
                     /locus_tag="RPW04_000737"
     CDS             complement(20751..>21193)
                     /locus_tag="RPW04_000737"
                     /inference="COORDINATES: protein motif:HMM:NF018979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HDX6294842.1"
                     /translation="FYRLFGVFLFCTGIFVIYGAMSFNVTFSYDPLGPKTFPMLLGIL
                     LSILSVFIIIGPNKAEFANLSINLKLIYLVTLIVLYQLSFDFLGFLFATFILVSLISK
                     IFKAKNIEAAICGILISITVYLVFKEVLDIPLPTGVIFENILGE"
BASE COUNT         7333 a         3177 c         4117 g         6566 t
ORIGIN      
        1 tgctttgagc ggatttttgt ttggtataaa aagaggctgt gactggcttg gcgtatttct
       61 cgcagcgttt ttaacggctc taggcggcgg acttatgaga gatgttatag ttggacgtcc
      121 ggcttattca tttacgcacc atatgccggt tttaattgtg ataggagtga tgtttatagc
      181 tatatttctt aaatttcacc gcgaaaatag aaacgatctt gagaaaaaat ttatatttat
      241 aatgaccgac gccgttgatg tgataagctt ttctatagtt ggagctatag tttcgctcga
      301 gtatggacta aacgtatttg gcgttgttat ggtggctttt tgcaacggtg ttggcggtgg
      361 tattttaaga gacgtacttt taaatgaagt tccttggttt ttaaaaaccg ggctttatgg
      421 aactattagc atgagcatag gcttgatcta ttattttatg agtttatacg gtcttactaa
      481 tatatattgg ataatggctc tgttcgcttt aggtgttatt tttagactct gtgcttacta
      541 cagaaaatgg aatttgccgc aaatttatta taaggagtag ttatgttgat gggaaattat
      601 gctagagttg atttaggatt taaaaaaggt aagggcgcta ttttatggag tcttgacgga
      661 aaagattatg tagattttgg aagtggtatt ggggtatgtt cgcttggtca tagtaataaa
      721 aaattagcaa aaactataaa aaatcaagca aaaacacttc tgcatacttc aaatatatat
      781 aaaataaaac ctcaagaaaa gcttgctgat aagatgtgcg atctacttgg agagccgtac
      841 tatctatttt ttgcaaattc cggagctgaa gcaaacgagt gtgctataaa attagctaga
      901 aagtacggaa attcatttga agagaagaaa tacgaaatca taactcttgg caactcattt
      961 cacggcagaa caattgctac gctcaagctt accggacaag aaaaatttca ttcaaaggat
     1021 ttcgctccgt atccagatgc ttttaaattt tttaatacta tagatgaaat tatagaaaat
     1081 cttaatgata aaacagttgc tgttatggtc gagcttgtgc aaggcgaggg cggtataaat
     1141 cctctaaata tagccgaaat acaaaaatta gctcaaattt taaaagagcg aaatatacta
     1201 tttatcacag atgaagttca atgcggagta tatagaactg gtgagtttgt aactagtcaa
     1261 atttatggtg taactccaga tatcataact tttgcaaaag gtcttggagg cggcgttagt
     1321 ataggagcgt gcgctagtaa aaaagatatt tttaaagccg gagatcatgg aagtacgttt
     1381 ggtggaaatt ttttagcgat gagcgccggg atcaccgttt taaaagagat gaaaaaactt
     1441 aaaaaaagcg gaaaattaga cgaagccata aaagagttca aaaataattt agatgagctt
     1501 gttagcaact atagcgatgt ttttagaagc agagtaggac taggtcttat gcaaggactt
     1561 atattaaaaa atcctgaaaa tttagcatca gtgttcaata aagccttaga aaaaagggtt
     1621 cttgtgctaa aatccggtaa agatacattg aggtttttac cgcctttaaa tatcagtaaa
     1681 aaagagataa aaaaaggttt taaaagatta aaaaatgcct taaacgaact aaatttggaa
     1741 agataaatga agcttttaac acataattta aacggtaaag atatcttagc agtattaggt
     1801 gccgatggca gcgtaataga tatatctaaa gcaaatatat ataaaaaaga tatgaatgaa
     1861 ctcattctta ctttaaataa tgatgaaaaa acaagattag agagtttaag tcatgaaata
     1921 ggcggtataa aatatgaaaa tacggtaaaa agatctccta taatttttcc tttgcaagat
     1981 ataatctgtc ttggtataaa ttttatggag catgctgtag agtcttataa atttaaaaaa
     2041 attgagtttg atggaaaaag agagtatccg gtttattttt caaaaagagc aaacgagata
     2101 gtaggagacg gcggttttat agagtcccat aacgatataa ccagtactct tgattatgaa
     2161 gttgaattag cagccatagt cggcaaagac gctaaaaaca taagtccgga tgaagtaaat
     2221 aaatatatat ttggttatac tattttaaac gatatcagtt caagagatat acaaaataga
     2281 tataagcaat ggtactatgg caaaagtctt gatggggcaa ctcttatggg tccttggata
     2341 gtgactgatt tagatgttgc aaatttgaaa atagaatctc gtataaatgg agaacttcgt
     2401 caaagttcaa atactaataa aatgatattt gatataaatt atgttttaag cgatcttagt
     2461 aaaggaatga cgataaaagc cggcagcata atatctttag gcactccgag cggtgtaggt
     2521 atgggattta ctccgccaaa atacttaaag actcaagata tggttgaatg ttatatagaa
     2581 ggtatcggaa ctttaactaa tattgtaaaa tagagtgtaa aataatttta attttattaa
     2641 aaattattta taattaagca ttaaaaaaaa ctaaaaaaag gaaaattatg gcagatgaag
     2701 ctaaaacaac agagggcgga agtaaaaaaa gtccggtagt tcttatagct atcgttggag
     2761 ttcttgtatt tttacttatt atcggtgctt tagtagcatt tatgttagta ggaagcagtt
     2821 ctgagcaaaa aatggaagca aatcaagctc caaacagcac ccaacagcaa gcagctccga
     2881 gtccaaagca gcgttcaaat gactttttta atgttggtcc aatgtatcct atggatcagt
     2941 ttttagtaaa tttacttagc gaaagcggtt ctagatttct aaaaactact ttaaatttag
     3001 agcttagcga acagacttta agtcctgaaa tagataagaa aaaacctctt attagagata
     3061 ttatcataag aactttatct tcaaaaactt atgaagatgt tagtacttca aaaggtaaag
     3121 agcgtttgaa agatgagttg gtaactaaga taaatgagat actaagagac ggatatataa
     3181 aaaatgtata ttttactgat tttatcgtac aatgataggt atagatatag tcaaaataga
     3241 cagagtaaca tctgctaaat ctaaatttaa aagtaaattt atatataagt ttttgctatc
     3301 tagtgaagtt gctttagtca aaaacgatgc aagcttagca ggtatttggg cagctaaaga
     3361 ggctgctagc aaagctttgg gttgcggaat tggtgctgaa cttagctttt tagatattga
     3421 aatttataaa gataaaaaag gcgcaccgaa gctaaagttt aacgaaaata tagtaaaaaa
     3481 gtttaatata aaaaatacaa gtttaagtat cacgcacgat ggcggatttg ccatcgcagc
     3541 cgtgatagta gaaaattaat catacaatgt agttgataga tatctctctc cagtatcgca
     3601 aagtatggtt actatcgttt taccgtggtt ttcagctctt tttgccactt cttttgcagc
     3661 atatacattt gcaccgctag aaactccgac taaaagacct tcattttgag ctaatgcttt
     3721 tgccgtagct atagcatctt cattcgatac ggtaaaaaac tcatcgataa cgtctctgtt
     3781 caaatttttt gggataaagt ttgcacctat accttgtatg gcgtgaggtc ctgcttctcc
     3841 tttgcttaaa agaggtgatt tctcaggttc tactgctata atctttacgt taggattttt
     3901 tgctcttaat acctctgcta taccgcttac cgtgccgcct gtgccaaatc cagctacaag
     3961 tatatctacc ttgccgttgg tatcgtttag tatttctatt gcggttgtgt ttttgtgcat
     4021 agcaggattt gctggattgt caaattgact tgggatgaag ctattttcgg tttcgttggc
     4081 tatttttata gcttcattaa cagctccttg cataccgtat ttaggatctg ttaatacaag
     4141 attcgcaccg aatgctttta gcagtttttg acgctctaaa ctcattgagc ttggcatagt
     4201 tagtatcatt ttaagtccta attgagcgca gaccatagct agaccaacac ctgtattccc
     4261 actagtaggt tcgatgataa cgctattttt gtttatcttt ccttcgctca tacctactct
     4321 tatcatatta agagctattc tatcttttac tgaatggctt gggtttaaaa actcacattt
     4381 tgctaaaata gttgcatcat ttccaaattt atttattcta actaacggag tattgccaat
     4441 aagctcagtt acattgtttg caattttcat taatttctcc ttaaatcaca tagttcaaat
     4501 attttttatc ttgactttga tactctttaa agctgcttag cggttttgaa aaaagttctg
     4561 tgagtttttc attatactct ttaaaaaata gattatatga actatgttct acatttaaag
     4621 aagttagccc aaaatcattt tctaaagcat aaaaaatatc gtaaaaagtt atctcatcta
     4681 aagttttatt taaaaagtaa ccacccttaa gcccttttat actacttaca aaaccggtat
     4741 ttcttagggt gtttaaaact tgttctaaat agttttttga tacacctata ttttgagata
     4801 tgtctttaag agagaccgga tttttttggt ctccttttga tatttcaaac attgacatta
     4861 gcccatacac gcctttagta cttagtaagc tcattgcatc gcctctttta aatcattgat
     4921 cagatcatcg gcattttcaa gacctatgct aagtctgata agtccctcgc ttactccagc
     4981 atcttcaagc tcttttttgc ttagctgctg atgagtagtg ctagcaggat gtgttattat
     5041 tgatttgcta tcgcctatat ttacaactac gctaaatatt tttacgttat ttagtatttt
     5101 tgcagcagtt ttgccgtctc ctacatcaaa actaagcaat ccactagcaa gaccgtctgt
     5161 gaaatttgct tttacgtatg agtttaactt cgagctagca agacctggat aatttacgct
     5221 ttttactttt ggatgctttt ctaaaaactc agctacttta agcgcatttt ttgaatgctc
     5281 ttttatcctt atgctaagag tttctaaacc ctgtataagt tgaaatgcgt taaatgccga
     5341 aagagtagct cctatatctc ttaatagact taatcttatt cttaacgtaa atagatcaaa
     5401 cattcctttt aaatccgaat aaacaagtcc atgataactc tcatctggag tgttgaaatg
     5461 agcatatctc ggattgccta ctaacttatc gtttaatccg tctctgcttg ctattgcccc
     5521 ggctacgctt aaaccttgac cacttatgta tttgctagca ctatggacta ctacgtcaac
     5581 gccttttttt aacggattga ataaaatagg tgtcgcaacc gtattatcgg ctatcgttat
     5641 cacattgtgg cgatttgcta tttgtactat tttatctaca tttgaaatag cgatttgagg
     5701 atttgaaaga gtttcaaaaa atatagcttt tgttttatca tctataagtg cttctaagtc
     5761 atcggcatta tctgaatcaa atatctttgc ttttatacca aatcttttta tagtatgagt
     5821 taaaagagtt gtagctcctc cgtaaatttt ttgtgccact atgatattat ccccagcttc
     5881 tgcgaggtta gctatagagt aaaatatcgc tgcttgaccg ctagaagtgc ttatagctgc
     5941 ttttgcgcct tctagagctg ctattctagc ttcaaatacg tctagtgtag ggtttgttaa
     6001 acgagagtaa atttggccaa gctcttttaa agcaaatcta tttgccgcag tttcacaact
     6061 accaaaatca tatgccgtac tctggtaaat cggcacagcc attgtaccgt gtccatcttt
     6121 tgagttatag ccaaagtgtg ttgctagggt ttctttttgc atacaaaaat ccttttaaat
     6181 tttatttgat atttaatttt atcaaaaaat tttactaatg tcaagcatat aagtataaat
     6241 tatatatgtt ttattatgaa tcttattata tcgctattaa attatttatt tactaatata
     6301 gtatctattt ataatatcta tatggtatat tatttatatt gacaaatatc aacagaaata
     6361 gtattaaatt tttctacaat ttcaaaatgc accattataa atttaagaag gaacaaaatg
     6421 agcaagcaag aattagaaat gttttgtcat cagtgtcaaa tgagcgccct cggaggttgt
     6481 ggaagtaagg gtcaagatag cggaacttgc ggtaaagata gcacgttagc tagacttcaa
     6541 gatatgatga tatttggttt aaaaggtatg agtgcgtatc gccaccatgc aaacgagctt
     6601 ggtgcagata cgaaaaaagt agatgatatc atatctaaaa cgctgtattt tacgcttacg
     6661 aatatgaact tcaactttga tgaacatata gctcagcttt tagaagtagg aaaagccgga
     6721 gtagaagtca tggacgcttt aagcggcgct catactacta aattcggtgt gccgactccg
     6781 gtaaaagtta cgcaaaataa agcaaacggc aaagctatct tagtaagcgg acacaatctt
     6841 catgctttaa aagctctgct tgaacaaact gctggtaaag gcataaatat ctatactcac
     6901 tcagaaatgc ttcctgctca cgcttatcct gagctaaata aatttagcca tttaaaagga
     6961 aatttaggta aagcgtggtt tgatcaaact aaacttttta acgagtttaa aggcgctatt
     7021 ttgatgacta ctaattgtat cgtgccgctt cgcaaaaact gtgagtatgc agatagatta
     7081 ttcggttatg atatagctgg aagcaagggc gtaacgcaca taaacggcga tgactttagt
     7141 ccgcttatac aaaaagcttt aagtctgcct gagataagcg gatttgatag cgatgatttc
     7201 atagtaacag gacatcacta taaagcggtt ttacctatgg cgacagagat tttagaagca
     7261 cttaattgcg gtaaaataag aagatttttc gtgatcgcag ggtgtgacgc gccaggaaat
     7321 agtagaaatt attatagaga gttggcttta tctttaccaa aagattgcgt gatcttgact
     7381 tcgagctgcg gtaaatttag atttaacgac gttgattttg gatatataga aggtacgaaa
     7441 ataccgcgct acttagacct tggtcagtgc aacgacagta acggagcggt taaaatcgct
     7501 actgcactaa gcgaggcaac tagtatagct ataaatgatt taccgataac tatctcactt
     7561 atgtggatgg agcaaaaagc gatcattata cttcttgcgc ttttatatct tggagtaaaa
     7621 aatatccata tcggaccgac tttgccggag tttataaacg aagagatatt aaatttcttg
     7681 gtggataaat ttaatatagg tttgataagt ggtgacgcta aagccgatct gatgaaatat
     7741 cttggcaagt aaatttaagt aggtaaattt gatgagtgaa tttggaaatt aaatttaaaa
     7801 aatcaatttt ttaaatttat gcgcgtatca gacttgtttt gttagaatct ttttaaattt
     7861 aaggagataa aatggagcaa gtcaagtatc ttttaaatca tgaaaatatt agtttgatgg
     7921 ctattgatga tagtataaaa gttacaaatc cagctactaa agaaatccta gcttatgtca
     7981 aaaagactga tgaagcaagc ctagcagata tcatccaaaa cgcaaattta gcttttaaaa
     8041 gctggtcttc tgctttagct agttttcgca gcgatatact gatgaaatgg tatgaactag
     8101 tcatgcaaaa tagggcaaat ttagccagac ttatgacttt agagcaagga aaaagtttta
     8161 acgaggccag cggtgagata gcatacgcgg ctagttttat aaaatggttc gccgcgcagg
     8221 ctttaagaaa tgacggcgat atcttaacga gtgttaaaaa agatgaaaaa cttctcgtga
     8281 taaaacagcc cataggcgtt tgcgctgcga taactccttg gaattttcct tctgctatga
     8341 taactagaaa agcagctccg gcacttggag cagggtgctc tatgatagta aaaccggcta
     8401 gtcaaacacc gcttagtgct tacgctttgg caagtttggc ttacactgca ggtatcccaa
     8461 aagatctatt tgttatcgtt agcggggacg ctggtatgat gagcacggcg tttgcaaact
     8521 caaaaatcat aagaaagata agcttcactg gctcaaccga agtaggtata aaaatttatg
     8581 aaaaaagcgc gaaaactatc aaaaaactta gccttgagct aggcggaaat gctccgttta
     8641 ttgtatttaa tgatgcaaat ttggataaag cagtagatgg agtaatggct agtaaattta
     8701 gaaatagcgg ccagacttgc gtttgcgcaa atagaatata tgcccaaagc ggtatttacg
     8761 acgagttttg tgctaaatta aatatcgcta taaaaagctt aaaactagga aacgggctag
     8821 aaaatggagt aaatcaagga ccgcttatcg atgaaaatgc tcttaaaaaa gtggaagagc
     8881 atataaacga cgctttaaaa aaaggagcta aatgcttaag cggcggtaaa agaagctcgc
     8941 ttggaggaac tttttttgaa ccgactttgc taagcggcgc gactaaagat atgctagtag
     9001 cgcgtgaaga gacatttgga ccgctttgtc cggtttttaa atttcagagc gacgaagagg
     9061 cgatagaagc ggcaaacgat actgactttg ggcttgctag ctatattttt acgaatgatc
     9121 caaaaaggca atggaatatg tctgaaagcc tagagtacgg aatggttggc gtaaataccg
     9181 gactcatcag caacgaagtg gctccttttg gcggtgtgaa gtttagcggg cttgggcgcg
     9241 agggaagcag atatggtatg gacgaatata cggagcaaaa atacatctgt ttaaatttat
     9301 agtctatttt tatgagacct caactttatt tgcttttatg atgcgcctag ataaaaatcg
     9361 ataaatttat ggtatgttag aattcaaaat atttctttag aatattgaat gtacctataa
     9421 ttttagtttt gttttgatat aatttttata aatttagctt tttggaaata ttatgaatga
     9481 tgataaattt aaaagagtaa gatatttaag agcacttgaa aagtttgcta aattagtgat
     9541 aagaaatctc aaaagagaag atttcgatac tactaaattt gatattttag taaagaaaaa
     9601 cactcaaatt ttagaaaaaa tcgagccggc atatcttgat caaccatata cgaagtcact
     9661 ttgtgaattt gtgaattttg ctctaaactc acatgataaa acagagcttt taaaagccgc
     9721 aaacaattta gataagctaa aaaattccag aaactacaaa aaagaaaaac ataaaaaagg
     9781 aaactacgat gagtaataaa tgtgtaattt ttgacatgga tgcgacgctc atagatagca
     9841 aaaaggctat atattacact ataaactata tcagaaaaga gctaaatatg acgcctttag
     9901 atgctgagtt tataataaaa actataaatg atccgcttaa aaatcctata aaagagtttt
     9961 acgggataga gcaagctagc ggaaatatga gacatatttt tgaagaggaa tttgataaaa
    10021 attatatgct ttatgcaacc gtttatgaag aggcgatgaa agtcgtaagc agctgcaaga
    10081 atttggatta caaactcgca gtagccacga acgctccaca tgctaccata gaaagcattc
    10141 ttaaaaattg tggaattttg gatagtttcg atatgattgt cggttcaaat aaagaaattc
    10201 ctcaaaaacc agatcctaca atgctaaatc ttatcagaga ttcttttaaa tgtgaatgtg
    10261 tttttgtagg agatagtgcc aaagattact tagcatcgaa aaatgctaaa atggattata
    10321 tacaagttct ttgggggcga aacgagataa taaaaggtgc ggtaaattgc cgaaacgcta
    10381 ccgaagttat gaagattttg cgttaatttt tattttgcta tctgttttaa atttataggt
    10441 aaaattgaat tttaaattta gaaaatattt ctactcaccc gctaaatgcc gtgtttttat
    10501 atttttaaat tttaaaaata taattttata tagttttaaa tttgaaggga tttttatgga
    10561 taaatcttat ttttcgtatc ttcctgttag cttatttggt tctgttatgg ggctttgcgg
    10621 acttagtata ggctggaaat tagccgcttt tcattttgga tttaatggat ttatggctga
    10681 tattttagct ttgttagccg ttttggattt tattatttta agtatatgtt acgctataaa
    10741 gatcatatat aagactcaaa gttttaaaga tgagtttata aatcctatga caaagagctt
    10801 ttttggaact tttattatat ctattttact gcttcctata gttatatttg aatattttcc
    10861 aaaaattgct tttatattat ggatagcagg agttgttttg atgctaagtt ttgccatata
    10921 tatggtaagt ttttggctta gtaaatcgca agatatatcg cacgttactc ctgcatgggt
    10981 gatacctgta gtaggtacgc tagatattcc ttttgcaaaa aatttattta attttaatta
    11041 tttagatgac gtctctatag cggctcttgg cgtaggtcta ttttttgcta tacccatctt
    11101 tgttattatc aaaacaaaac ttctgttttc tgagcctatg ccagataaat taatacctac
    11161 tctaatgata attttagctc catttagcgt tggattttct gcatatatag aggttgtaaa
    11221 aaatgtagat atatttgcta aagggttgta ttttatagga ttgtttctat tttttgccat
    11281 gcttcctaaa cttagaaatg ctacaaaatg ttgtcctttt agagttactt ggtgggcagt
    11341 gagttttcca ttggcggcac ttttagtctc gactatcaag atggcaattg agttgaatga
    11401 gctgtatttg gatattttaa gcgttgtatt tttgattaca tttactatag ctatattttg
    11461 gcttacttat agaactttaa aaggagtatt tagcttagaa ctccaaaatc ttacttaaaa
    11521 tttaaaaata ttagcttatt tttatttaaa attatatgct agtttatact taaatttaaa
    11581 tttggttatg attatatcga atttcttaat tttttataaa ttcaaaaaat aaatgagcca
    11641 aaagatagaa aaattaacca aatatttgat aaaattgtaa aaatttatat tataaaggat
    11701 aaaaatggct gatataatct acacttacac agatgaagcc cccgcgcttg ctacgttttc
    11761 actttttccg gtgattaaag agtttttaaa tagagcaaat atcgatatac aaacagttga
    11821 tatatcttta tcgggaagga ttttggcaaa tttcagcgaa tatttaaacg atgatcaaaa
    11881 agtaccgaat tatcttgaga ttcttggaga aatgacaaaa gagaaatctg caaacattat
    11941 aaaacttcca aatatatcgg cctctcttcc acaactaaat gctgctatag ctgagcttca
    12001 aagtaaaggt tatgccgtgc caaattacat agaaaatcct acaaacgata aagaagagag
    12061 cataaaagca agatatgcaa gagttttagg aagtgccgta aatccggttc ttagagaggg
    12121 aaattcagat agaaggtgtg ccggagctgt aaaagcatac gcaaaagagt ttcctcataa
    12181 aaacggagct tgggattcta gtataaaaac tcgcgttgct tatatgcaag acggcgattt
    12241 ttacggcaat gaaaagtcta taatagctaa aaatagttgt gaatttaaaa tagaatttca
    12301 aaataagttt ggagaaacaa aactattaaa aagcggtata aaagcaggta aaggtgatat
    12361 cataagcgct acatttatga gcgttaaaaa gcttgacgag ttcataaata gtacgatgca
    12421 agatgctaaa gatagctcac ttttatactc tgtacactta aaagctacta tgatgaaagt
    12481 aagcgatccg gttatttttg gtcattttgt taaggtattt tttgaagaaa ttttcagtga
    12541 atttgaaagt gaactcaaga gtgccggaat catagcaaat aacggtttaa aggatttatt
    12601 tagtaaaata gaaaatcttc ctataaaaga taaaatactt tctaaatttc aagagataat
    12661 tcaaaaaaat ccagatttag ctatggtaga tagtgataaa ggtattacaa atttgcatgt
    12721 gccaagcgat gtaatcatag atgcttcaat gcctgctatg ataagaaata gcggtaaaat
    12781 gtgggataaa gagggaaaaa caagagatac tttagcagtc attccagata gaacttacgc
    12841 tactatatat gaagcaacta tcgatgattt aaaagtaaac ggagcattaa atccggcaat
    12901 tataggaagt gtttcaaacg taggtcttat ggcaaaaaaa gcagaagagt atggtagtca
    12961 cgacaaaaca tttatagctt ctgagagcgg caaatttata cttagctcgg attctggtga
    13021 aaaaatggaa tttgaagtag aaaatggtga tatatttaga gctatgcaag ctaaagacga
    13081 agctataaaa gactggataa agctagccgt aagcagagct aaagctacca atgctccggc
    13141 gatattttgg ttagataaaa accgtgccca cgatgcaaat atgatacaaa tcgtaacaga
    13201 tgagctaaaa aaatatgata tttcaaattt agatataagt atagccgagc cgacaaaagc
    13261 tataaaaaga agtatatcta taattagaag cggaaaagat gccataagcg tgacaggaaa
    13321 tgtactaaga gattatttga ccgatctttt ccctatactt gagctaggaa ctagtgcgaa
    13381 aatgctatct atcgtgcctt tactaaacgg aggtggactc tttgaaaccg gcgccggcgg
    13441 aagtgcgcca aaaattgccg gacaacttat agaagaaaat catcttagat gggatagttt
    13501 gggtgaattt ttggctcttg gagcaagcct agagcatctt tcaaacataa gcggtaaaaa
    13561 agaggcaaaa attctagccg atactcttga taaagctatc gtaagttatc ttaaaaatga
    13621 taattctcct cgcaaaaatg taggtgaaaa cgataatcga ggaagtcact tttatctttc
    13681 attatattgg gcggacgagt tatcaaaaag taaactaaaa gataagttta ttaacatagc
    13741 aaacgcgtta aatgaaaata aaaatgtgat aataaacgaa ttaaacggtt ctcaaggtca
    13801 taaagtagat gttggcggtt attataaatt tgatgataaa ttagcttcag atattatgcg
    13861 cccaagtaaa aattttaata atgcaattgg aaaatgagtt gaaaatagca attataggtg
    13921 ctggaaatgt aggagcaagc tgcgcaagct tgctcatatc tcgtaaagtg tgtaaaaaag
    13981 taacacttat agatataaat aaaaatttag caattgcaaa agctatggat ttggctcaga
    14041 tggcagctgt tttaaattta gacatagata tttttggtgg tgataattat gaacttttaa
    14101 aagattttga tattgttgtt atcacagccg gatttgctag aaaagatgga caaagcagag
    14161 atgatttagc tatgatgaac gcaaaaatag tatctcatag ctcaaaaatg gtatctaaat
    14221 ttgcacctaa atccattata atagtagtca ctaatcccct tgatatcatg gtttatgttg
    14281 cttttaaaga aagcggattt gctcgccata aagtaattgg aatggcaggt gagttagata
    14341 gtgcacgttt tagatattat atgtcgcaaa aactcggttt aaacgttgca caatgctttg
    14401 gtaagtgtgt tggaatgcat aataatagta tgatatgcct tgaatctagt ataaaattta
    14461 aaaatcaatc aatatgcaaa gatgagttta aaaaatattt tgaagatatt aaactcaata
    14521 caaaaaacgg cggttcaaat atagttaaac taatgggaac ttcagcattc tacgcacctg
    14581 cggctggagt tgttaagatg tgcgaatgta tccaaaacga caacgatgaa actcttagtt
    14641 gctcggtttt ggatgaaaat ttgataccga ctggaagact ggttaaatta aacaaaaacg
    14701 gcgtacaaaa aatttttgat ctaaatttaa ctaatgaaga gagtaaaatt atggataaaa
    14761 gtatatctga atttatattg gtcataaata aaatttattt cagtgacaat aaaaattaat
    14821 attaaataaa aatgtaaatt tagttattta gtaggtcttt tttatcaact tttttaagtt
    14881 aaatttacac aaatttaaag ttaaaggagt tctatgaata tccatgagtt tcaagccaaa
    14941 gagcttttaa gagattttgg cataaacgtc gctgatggca ttatggtagt tagtgtagac
    15001 gatgcactaa atgcggctaa aaaactcggc ggttctgttt gggctgtgaa ggctcagata
    15061 cacgctggag gtcgcggtct aggtggtggt gtaaaaatcg caaaaagctt agatgaagta
    15121 aaagagtatg cgagtaaaat tttaggaatg actttagtta ctaaacagac cggaccagag
    15181 ggaaaacttg ttaaaaaact atatatagaa aaaggaacaa atatagacaa agagtattat
    15241 ctaagtctaa cctttgatcg tataaacgag tgtatagctg tgatagcatc agctgatggc
    15301 ggtatgaata tagaagaagt agatcatgat aaaataatca ctataagaat agatcctcaa
    15361 atagggctta gagacttcca ctctttagct attgctgatt ttttaaattt agataaagat
    15421 ttgagtgtta agcttcatgt gcttttatct aaattatata gactttactg gcaaactgat
    15481 tcaaatttag tagagattaa tcctctagtt ttaacaaaag aaaatgattt aatacctctt
    15541 gacgcaaaaa tgggctttga tgattcagct ctatttagac aagaaaaaat agcaaatatg
    15601 cgtgatatcg atgaagaaga gcctagtgaa cttgaggcaa aaacctatgg tctaagctat
    15661 gtaaagctag atggaaatat cggctgcatg gtaaatggtg ccggactagc tatgggtact
    15721 atggacacta tcaacggcgt aggcggaaaa ccagctaatt tccttgacgt gggtggcggt
    15781 gctaatccgc aaaccgtagc aaaagctttt gaaattatct tgagagataa aaatgtaaaa
    15841 tctatatttg taaatatatt tggtggaata gtaagatgcg accgcattgc aaatggtatt
    15901 ttagaggcta caaaattaac caaagtagaa gtacctgtca tagtaagact agatggaaca
    15961 aatgcaaaag aagctgcgga gatattaaaa caagcaaata taacaaatat catctctgca
    16021 cctgatctag aaagtggtgc taagatgtct gttgaattag caaacaagta aggggatagt
    16081 atgagtatat tggtagataa aaatacaaaa gttatagttc aaggatttac aggaaaagag
    16141 gctacttttc atgctgagca gtgtttggct tacggcacaa atatagttgg tggcgttact
    16201 ccatttaaag gcggtatgat acatcttgga aaacctgtat tcgatactgt tgtagaggct
    16261 gtaaaatcaa ctaatgcaac agttagtttg atatttgtcc ctgctaagtt tgttgcagct
    16321 agtataatag aagccgccga tgctggtata gagttagcag tagttataac cgagcatact
    16381 ccagttagag atatgctaga agctaagaat tatgcaaata aaaaaggtat gaaattaata
    16441 ggtccaaact gccccggaat tataagcgct gatcaagcaa aattaggtat aatgcccgct
    16501 atggttttta agcgagcagg tgtaaatata gggcttatat caaagtctgg aacacttact
    16561 tatgaaggag caaaccaaat tttaagtgaa ggttatggta tatctactgc tgttggtatc
    16621 ggcggagata gcgttatagg attaacttat agtgagcttt tacctatgtt tgagaatgac
    16681 cctgatacaa aagctattgt tatgataggc gaaatcggtg gaagtttaga aatagaagct
    16741 tgcaacatta taaaaaatat gaaaaaaccg gttgtagctt ttatagcagg tcaaagcgct
    16801 ccaaaaggca aaagaatggg gcatgcaggc gctattataa gcggagaaga ttcaacggca
    16861 gccggaaaaa tgaaagcctt aagtgccgcg ggagctcatg tagtagctag cccagcacac
    16921 ataggtaaaa aaataaaaga attaataggc taataggaga atatgatgat agaacaacca
    16981 gtcggtatag ctgtttgggt agatgaaagc aggtgtaaag cctgcgacat ttgtgttagt
    17041 tactgcccgg caggagtttt gggcatgaaa gaagatattc atgcagtaca aggaatgatg
    17101 atagaagtag ttcatccaga atcctgtata ggatgtagag attgtgagct ccattgtcca
    17161 gactttgcta tctatgtggc tgaaaagggt tttaaatttg caaaaattag cccagaagct
    17221 aaagaaagag cagttgctgt taaagcaaat cactttagga aacttaaata aggatagcaa
    17281 aaatgagaga attaatcacg acaggaaatt cacttgcggc gcgtgctgct gtggaatgtg
    17341 gctgtaattt ttttggcgga tatccgataa ctccatcaag tgaaattgca catgaactta
    17401 gtgttttact acctaaaaaa ggcggtaaat ttatacaaat ggaagatgag atagccggag
    17461 tttccgtagc tcttggtgct agtatgagtg gtgctaaagc aatgactgct agctcaggtc
    17521 ctggaatttc tttaaaatcc gagcaaattg gtcttggctt tatagctgaa gttccgcttg
    17581 ttatagcaaa tgttatgcgt ggcgggccat cgaccggact tccgactcgc gttgctcaag
    17641 gagatatttt acaagccaaa actcctagcc atggcgatta ttgctctatt gcagtagctc
    17701 ctggaagttt aagcgaaatt tatacagaaa ccgtaagagc ctttaatctt gctaatcgtt
    17761 ttagcactcc tgttttcttg ctacttgatg aaactatagg tcatatgcaa ggtaaagcta
    17821 atgttccaga tatagcagat ttaaaaatag aacctagacg cgagtttaaa ggtgatccaa
    17881 aagattataa tccttatgaa gctgcggctg atgaacctgc tactttaaat tcatttttta
    17941 aaggatatag atatcacata accggacttc atcacggacc tactggattt cctaccgaag
    18001 atggaaaaat ggttgattat aatataaaaa gattatttaa taagatacat gctcacttag
    18061 atgaagtatt aaattatgaa gaatataagc tagatgatgc agaaatatgt gttatttgtt
    18121 atggaagcgt aagtcttgct gctaaggaag ctgtcgataa attaagagaa gatggtgtaa
    18181 aagtcggaat attcagacct ataactatat ggccaagccc ggaagcgaag ctaaaagaag
    18241 tttgttctaa atttaaaaag attttagtgg cagaattgaa catgggtcaa tatttaggtg
    18301 aaatacaaag atgcagctta agagatgatt ttaaaactct ccttaaagca aacggacgtc
    18361 cgataagtcc aactgaaatt ataaataaag ttaaggagtt ttaaaatggc ttttaactat
    18421 gataattatt taagaacaaa taaaatgcca acactttggt gctggggttg tggagacggt
    18481 gtaattttaa aaagcgttat aagggctata gacactatgg gttggaatat gaatgatgta
    18541 tgcgtagtaa gcggtatagg ttgctccggt agattttcaa gctatgtaaa ttgcaacacg
    18601 gttcatacta ctcacggtcg cgccatcgct tatgcgacag gtataaaact agcaaatcca
    18661 gaaaagcatg taatcgttgt aaccggtgat ggcgatggac ttgcgatagg tggcaaccat
    18721 acaattcatg gatgtagaag aaatatagat ataaaccata tattaataaa taactttatc
    18781 tacggtctta caaactctca aacaagtcct acaactccac aaggattttg gactgttact
    18841 gctcaatggg gaaatataga tccgaatttt gacgctgcaa agcttgcaac cgcggccgga
    18901 gctacgtttg ttggtcgtga aactgttata aatccatcaa gaattgaaaa acttttagtt
    18961 gaaggattta aacatgaagg ttatagcttc tttgatattt tctcaaactg ccatataaat
    19021 ttgggtagaa aaaataagat gggcgaagct actcagacta taaactggat agacggtaga
    19081 actgtttcta aaactaagtt tgacgcacta agcgatgaag aaaaactagg caaatttcca
    19141 accggcgtac ttcataaaga cgatagtcat atagagtact gcaaagctta tgaaaaagtt
    19201 atagaagctg ctcaaaacaa aacaaaaatc aactttgagg agataaaatg agttcagcag
    19261 agttaagatt tgtcggagta ggcggacaag gtgttatact agctggagag attctctcag
    19321 cggcgaaaat agaagcgggc ggatatggag taaaagcttc tacctatact tcacaagtgc
    19381 gtggcggtcc aacaaaagtt gatatcattc ttagtgatga ggagataaga tatccttatg
    19441 caaatgaagg cgaaatacag tttatgctag ctactgcgca aaatagttac gatactttta
    19501 aaagtggtgt gaaagagggc ggtataatcg tagtagaacc gaatttagta aagcctagtg
    19561 aagaagataa aaaacgctgg aaaatatatg aaattcctat tatttctatc gctaaagatg
    19621 aagtcggaaa tgttatcact caaagcgtcg ttgctttagg tgttgctgta aaatttacag
    19681 gcgttatgga tgcagaaatc gtacgtaaag agatgttaag cacggttccc gataaagtta
    19741 aagaagcaaa taataaagcg tatgatctcg gtatggctta cgcttcaaag tgtctttaat
    19801 atattttaaa tttataaata ataaatttaa aaatccaaag ctctttttct gggctttgga
    19861 tctacattta tttacctttt taacttatat tttttagaaa ttattttagc tgtaaatggg
    19921 gtaaatataa ctatagcgac cagcagccat aaagccaagt ttatctctcc tttaaaaaat
    19981 atatctattt ttccaccgct tatagcaaaa gctcttctta agctatcttc cataataccg
    20041 cataatacat atccaagtat agtagtcgcc atagaaaagt taagttctct taagaaatat
    20101 ccaaaaacac ctagtatcat agataataaa agagcaaatg agctggcatt tgcagagtat
    20161 acgccagtaa gagctaataa actaataccc agtacggtac ccgaagtata taggtatcat
    20221 agctcaggct cattaaatgt aaatcttaat attccagtag tagaatctac accgactaca
    20281 gctataagaa tccctatgat aactccggtt aagcttttta tacgtatagc tatactagaa
    20341 agtatagagg taaaaaaagt aagccctatc actgctatgc taccacttat aaaagatgcg
    20401 attccagata tagctaaagc tggatccgca aaaccatttt ttgccatacg atacccgtca
    20461 agagtcgtaa ataccgctcc ggcgtccccc agtacgttta aaggtatgct taaaatccta
    20521 ccgccgaact cagctccata gtataaccca catagcataa taagagacga ttcgaccaga
    20581 agacctaaaa atatatgtta taggtagcag tatagcgact ccgttgatag gatctagcct
    20641 gggaagagac ccaaaaagag tttctagcat agctccaaga aatactaaaa ataaatttaa
    20701 agtctgaaaa gctacgctaa atacgtctcc taaaagagat aaatttttat ctattctcct
    20761 aaaatatttt caaaaattac gccggtaggt agcggaatat ccaaaacttc tttaaatacc
    20821 aaataaacgg taatgctgat caaaattccg catatcgccg cctctatatt cttagcttta
    20881 aatattttag atatcaaact aactagtata aaagttgcaa ataaaaatcc taaaaaatca
    20941 aagcttaatt gatataaaac tataagcgta accagatata tgagttttaa atttatagat
    21001 aaatttgcaa attccgcttt atttggtccg ataattataa aaacggacaa tatactaagc
    21061 aagattccaa gcagcatagg aaaagtttta ggaccaagag gatcatatga aaatgttaca
    21121 ttgaagctca tcgcaccata aatgacaaat attcctgtac aaaataaaaa tactccaaat
    21181 aatctgtaaa acg
//
LOCUS       DAPPKW010000021        21156 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.021, whole genome shotgun sequence.
ACCESSION   DAPPKW010000021 DAPPKW010000000
VERSION     DAPPKW010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 21156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21156
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.021"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            14..667
                     /locus_tag="RPW04_000738"
     CDS             14..667
                     /locus_tag="RPW04_000738"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDX6294843.1"
                     /translation="MKFLYDENAKNEILEIKGDSFNHLKARRQNVGDRIDIRNLKDGY
                     SYIYEIIKFERKATCELVFKSLTKSLDSDLVLAWAVVDPSVIEKTLPSLNELGVKKII
                     FVYTDFSQRNIKLDFDRFRRILIGSSQQCGRNSIIEFEIFADIDEFLKVHKNVSLIDF
                     GGDSLDNANGSEVLFVGSEGGFSAQERVKFLNRYCLKCPNILKSNTAIISVASKFLV"
     gene            669..995
                     /locus_tag="RPW04_000739"
     CDS             669..995
                     /locus_tag="RPW04_000739"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294844.1"
                     /translation="MAIILLIFVCTLHAFICSVPGFIIGFWWDIDRYKKYIFFILVLI
                     LSVFLEMNRLDAPFSNIVISFLEDILGAYFGLFVLLSFKNMAKRTGLCKICDKFRRKH
                     EELDDN"
     gene            973..3600
                     /gene="polA"
                     /locus_tag="RPW04_000740"
     CDS             973..3600
                     /gene="polA"
                     /locus_tag="RPW04_000740"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDX6294845.1"
                     /translation="MKSLTIIDTFGFFFRLYYAMSGLKSQSGKPSGMVHGFANFIYNL
                     KQDFPSDYIVFALDSGGKTFRSQIDPNYKANRVSPPQELKDQLPVCIDMIEKMGLCSL
                     RVEGYEADDIIASFIKNSKDQDLEIRIVTHDKDLYQLIDDRVSIFSPAKKELYNRDGC
                     YEKYGVYPEQIRDFLALCGDSADNIPGVKGIGEKGAKKLLDEFGSIENLYENLSQVRN
                     ERTKNMLFESKENAFISKRLATLYDELETPNLQNAIFPTSNPLLKVIDTLKDYSLSRL
                     LATLKSSDEDKILSFTPVLLTDESELIRLLEDMNSEIMISFDTETTSTDAKIAKIVGF
                     SFCFNEQTSYYVPLAHSYLGVESQISMNSAKWAISQIYKGFVIGQNLKYDFRIVANNF
                     GIEPPKNYSDTMILAWLDDPSSSVGMDNLAKKLYNYETIKFESVVKKGEDFSSVDLQS
                     ASKYASEDAWITLKFYKTFTNKLEESMLNIAKNVEFPFILTLFDMESNGIRLNLEKLR
                     ALILRNDSALRALTTEIYELCEQRFNINSSKQLGSVLFDYLKLPAKKKTKTGYSTDES
                     VLSELLDLHPSIEKILEYRELYKLQSTYCEPLLNLAIKDENHRVYTNFIQTGTATGRL
                     SSKNPNLQNIPARGNLAKDMRAVFEPKDGYSLISLDYSQIELRLLAHFSCDPALIEAF
                     KNGDDIHARTAISIFGESNTQNRAIAKSINFGLIYGMGSNKLSNELSIDKKSAKEYID
                     RYFKAFSTIKDFLDSIKNRAKNDGFVETLIGRKRYFDFGGATPMQLAMFEREAVNTKF
                     QGSAADIIKIAMIKVKDLLNDDAKMLLQIHDELIFEVRDEIAPSFAKNVQELMQTVVA
                     LNVPLVANWGMAKNWGDLK"
     gene            3672..4442
                     /gene="motA"
                     /locus_tag="RPW04_000741"
     CDS             3672..4442
                     /gene="motA"
                     /locus_tag="RPW04_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HDX6294846.1"
                     /translation="MDLSTIFGMVLAITSISVGDILEGGNPLHVLHISSVLIVIPTAM
                     FSAVTATNKKYVKAAFKELKVAFKGSGVDMSKRIAEMVEYSTLARKNGILSLEQKASS
                     IDDEFLKTGLSMLVDGQPIDEVKENLELAIETTEEYYHECAHFWIKTGESCPTFGLVG
                     AVMGLMLALQLLDDPAAMAAGIAGAFTATVTGIMGAYAFFGPWGQKILGNAKDIIKEK
                     TMIIEALVGIAEGANPRSLESKLFNFLDKNEPRVSQFN"
     gene            4451..5167
                     /gene="motB"
                     /locus_tag="RPW04_000742"
     CDS             4451..5167
                     /gene="motB"
                     /locus_tag="RPW04_000742"
                     /inference="COORDINATES: protein motif:HMM:NF006285.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HDX6294847.1"
                     /translation="MAKKKKQQECPAGEKWAVPYADFLSLLLALFIALYAISAVNTAK
                     VEALKTEIIKIFDFPDSKGVKQSSKNAKSEKQFDGPGIAMQNSDSTSVKQNTNNERYR
                     VALDQAENQVAIDLPAGIKFDPMSAEIYNPDMINFVKIISMIINKVPESVSVEIRGYA
                     DDYNEYAKDYKLAADRAYNVLTMLIGNGIDPKRLRFTSFGDSVQIKNSDLKLAKIYFR
                     IDIKDKKLQKSVLDIVNEIQ"
     gene            5304..5585
                     /locus_tag="RPW04_000743"
     CDS             5304..5585
                     /locus_tag="RPW04_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HDX6294848.1"
                     /translation="MAVRITDTCISCGSCIDECPVSAIVDDSDNPTGEDAYYVYADKC
                     VECVGHNDSPACAEACPTDGCIVWSEVISGQPSRSEITADVRNAATPVL"
     gene            5689..6102
                     /gene="ndk"
                     /locus_tag="RPW04_000744"
     CDS             5689..6102
                     /gene="ndk"
                     /locus_tag="RPW04_000744"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDX6294849.1"
                     /translation="MEQTLSIIKPDAVKKGVVGKIIDRFESNGLRIAAAKKLQLSVED
                     AKKFYEVHAARPFYGELVEFMTSGPVVVMVLEGDNAVVKNRELMGATNPKEAAAGTIR
                     ADFAESIDANAVHGSDSLENAKTEIAFFFAKREIC"
     gene            6118..6483
                     /locus_tag="RPW04_000745"
     CDS             6118..6483
                     /locus_tag="RPW04_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294850.1"
                     /translation="MKIPFDKITSLLVPFEIVINGLKFNGNLKKINPKIVECIAVISG
                     NLNYYCDRCGKDMILNLNEDVKLSLSNGIYKDLENDLSDTIEFYDGEIDIDEIFESEI
                     EAYKSGYFYCDECKILKGE"
     gene            6485..6631
                     /gene="rpmF"
                     /locus_tag="RPW04_000746"
     CDS             6485..6631
                     /gene="rpmF"
                     /locus_tag="RPW04_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDX6294851.1"
                     /translation="MAVPKRRVSHTRAAKRRTHYKVTLPMPVKDKDGSWKMPHRINKT
                     TGEY"
     gene            6641..7630
                     /gene="plsX"
                     /locus_tag="RPW04_000747"
     CDS             6641..7630
                     /gene="plsX"
                     /locus_tag="RPW04_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012001307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HDX6294852.1"
                     /translation="MISIAIDAMGGDFGPEPIITGVLDALKHRSFNAVLVGDIQKIKP
                     LIPEDYARFVTYIESSEVFSMGESATDALKRKESSIFKAIELVKNGECKAIVSAGHSG
                     ATMSLATLRIGRLKNVARPAIATLMPTSLNKKTLVLDVGANVDCKAEHLFQFAIMGES
                     YAKQIMRVKNPKVGLLSNGEEDCKGNEVTKEAFEMMSKLDSFIGNVEGNQIFDGSVDV
                     IICDGFVGNILLKTSEGVASAISKIIKESVKKSPFATVGALLMKRVFKALKIQIDYDE
                     YGGAPLLGVKDCVIISHGKSSPKAVKNAIFQALKFAESDINRVIEDELSHFVR"
     gene            7638..8624
                     /locus_tag="RPW04_000748"
     CDS             7638..8624
                     /locus_tag="RPW04_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HDX6294853.1"
                     /translation="MKKASIISVGAYIPKDILTNFDLEKMVDTSDEWIVKRTGIKTRH
                     LAKNEVTSDLAYKAALMAIQRAGIDKNDIDAVICATITPDYFCMPSTACKVASNLGLF
                     DVTAFDISAACTGFIYLLEIAKSLVESGAKKNVLIIGAEKLSSIINWQDRSTCVLFGD
                     GAGAAIVSSSDDNYIIDVHTSSDGSKGNLLITPGCGIVHPANKDTIDKKLNFLHMSGN
                     EVFKIAVNTLAKDVVDILEKNSVSSKDIDLFIPHQANLRIIEAVKQRLDFTDEQCVVT
                     VVDYGNTSSASIPMAMNDAYEDGRLKQGSLILLDAFGGGFTWGSALLRFGGK"
     gene            8698..9825
                     /locus_tag="RPW04_000749"
     CDS             8698..9825
                     /locus_tag="RPW04_000749"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HDX6294854.1"
                     /translation="MIYEGQDVLISECMGILQGLEQDYKKYGKNLAKESQKQIDPYDL
                     DDTLELIFDAIFKTNLDKEASLKQINKCFGNDETYANYFILKVLFHLLHRFSIYISKS
                     DLNSTIYIIYLENAIDAFTQVLMKTEAKTKISSPQSFKFGTSGGFMLFGDIIDEFRAA
                     LRSNSSLRFLNLYYGVNVSCDAKIASIEDDKVLFKVNLMQILAMKEEENAYILKGDNL
                     VSNVKADILSINLSNNTVLLNNFVRMENMFANQRKFPRVHPNQHTKVILSNKFGVSIE
                     GKLYDISQGGIGVVSIQNGGFKSGEELMAKFSLTMPRTKEVIDVYLELNLVVALNYQG
                     SMRYCCEIVKPQSITEKIVEFSKLRVKDTLDELQQKVELYR"
     gene            9822..12026
                     /locus_tag="RPW04_000750"
     CDS             9822..12026
                     /locus_tag="RPW04_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 family protein"
                     /protein_id="HDX6294855.1"
                     /translation="MKMPESGEFYLGLSENTPYIYDSKDLLTHAAIIGMTGSGKTGLG
                     ISLLEEASLNQIPTIIIDPKGDMTNLCLALSSEDEFIEVCADKNVGSSVYEQYKAGLE
                     SSFENFERVKKFKNSSVFKIFTPKSNAGLGVSLLSDFNAPKFDDFESLNSYIIGICGS
                     ILSLVGVKNDDFSSPEMLILQNIFFNRFSAKKDLSIAQLIEDIINPKFKKIGVFDVES
                     FYPADKRADLAMKINALVASPDFSLWCSGEKLDISNMLFENGKPRSNIFTISHLDDAS
                     RMFFVTILLNEMVSWMRGLEGTHKPRVVLYMDEIFGYFPPSSNPPSKLAMLTLLKQAR
                     AFGICVVLSTQNPVDIDYKGLSNIGTWFIGRLQTAQDKQNVISGLSGVGKTSDKEILN
                     TLSNLKKRQFLVKNIHDTNLQIITTRWALSYLKGPLNKNDISNLMKHFEIKNGSSIML
                     NSSAILNPDIVQIYEYGNSNKLFCHLLGTAKVRFISSDDELIKDRIFCLKADSDELDW
                     SNAEEISVSNFSCEKYENIELLDAPRSILNAKNLNEFVKSFTEFLYTNEKIVLYKAFD
                     IVSNLNESKDQFVLRVKLRADELLKEQKTLLMNKFEKEKSILEKRLLNAKNSLEKKKN
                     IANKSGIFAAIEIISGVLSAVFRKRLSSTKILSSTKKATDVFSKHDDMYASKETMQSI
                     LNEINELQSSYETKISELKESFDIANLQIDEKILRPKKSDILNEKVSVLWKS"
     gene            12036..12653
                     /gene="plsY"
                     /locus_tag="RPW04_000751"
     CDS             12036..12653
                     /gene="plsY"
                     /locus_tag="RPW04_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HDX6294856.1"
                     /translation="MNENIVAYVLAYLIGAIPFGLILGRIFGKVNITKEGSCSIGATN
                     VLRVLKSSNPNLAKKLAVLTVVCDAFKAFIPMVVAKVVFDLSDQTIWTMAVLSVIGHC
                     FSPYLKFEGGKGVATGAGALIYFLPLEIICALGIWFIIGKVLKISSLASLLALFTLIG
                     TSFIFHYEMPVINTHAPIFIISFVVLYKHIPNIKRLLSGSEKRVI"
     gene            12650..12967
                     /locus_tag="RPW04_000752"
     CDS             12650..12967
                     /locus_tag="RPW04_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HDX6294857.1"
                     /translation="MITVFVEDFKFKTIIGLLAFERVKRQKIRVDMGFKADEFIDYAF
                     VCEHTRNEFEKMKFKKVEEALQYFKNNFKEIFPSLEYFYMKISKVKIISNATVGAKIE
                     QLY"
     gene            13046..13717
                     /gene="hsrA"
                     /locus_tag="RPW04_000753"
     CDS             13046..13717
                     /gene="hsrA"
                     /locus_tag="RPW04_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homeostatic response regulator transcription
                     factor HsrA"
                     /protein_id="HDX6294858.1"
                     /translation="MRILIVEDEVTLNKTIAEGLQEFGYQTDSSESFKDAEYYIGIRN
                     YDLVLSDWMLPDGDGVDLINVIKQKSPRTSAVIISAKDDKESEIKALRAGADDYIKKP
                     FDFEVLVARLEARLRFGGTNVIKIDDLIIDPDEEKITYLGQEIELKGKPFEVLTHLAR
                     HSDQIVSKEQLLDAIWEEPELVTPNVIEVAINQIRQKMDKPLNISTIETVRRRGYRFC
                     FPKKA"
     gene            13756..15021
                     /locus_tag="RPW04_000754"
     CDS             13756..15021
                     /locus_tag="RPW04_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005871262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDX6294859.1"
                     /translation="MLIVIFSVMLYHYIKITIFENIVQSLTIEANNILDSKELLQIGE
                     LEFYYPQSQNLTVIGVEENTDNLSRPKFIQSEDENSTYLTLYYPYKDNMVLALKKNTT
                     EYSSVVNQVLVDILIINATAIFLILFYALFLSRMLLLPIKMLSLRLGQLNERFLQEVS
                     IDELPDEFKPLGDGINRLISRILTFVQYQKELFVGAAHELKTPLAVMKTKNEVTLIKQ
                     REPEKYIEALKNNNESINQMNKMIGSILEIGRQEGAQFEQPLNVDIIAYLNEIGNNFL
                     ILAKGEGKNIKMSLKPQTLKMFLQPTLFLHVIQNFVQNAIKFSPPNATIEIKSNLLNN
                     EFIVKVVDEGPGIDENKDLFAPFKRYGDKGGAGLGLFLAKGAAQALGGRIEIRNRTDR
                     SGAIATFILPINTKNRKMQKNISNSKFLK"
     gene            15068..15319
                     /locus_tag="RPW04_000755"
     CDS             15068..15319
                     /locus_tag="RPW04_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HDX6294860.1"
                     /translation="MSLMITKDCISCDACREECPDEAIYEDDPTYMIDPDRCSECISD
                     YAEPACIVICPVDCIVPDPDNIETPEELKLKHEQYLEGN"
     gene            15319..16797
                     /locus_tag="RPW04_000756"
     CDS             15319..16797
                     /locus_tag="RPW04_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA family phosphatase"
                     /protein_id="HDX6294861.1"
                     /translation="MPKRVAVIDLGSNSARMAIFERTSRLGFYILREYKIKVRLGEGA
                     YENGGVLQDGAMDKVFYAFSEFKHFLNLYGVNKVLCAGTSALRDAPNSNLFIKRVQDK
                     LGLGLKVIDGQMEAFYGGIAAINLLNPLKEATTIDIGGGSTELAKIEDGKIIDVISLN
                     VGTVRLKELFFDKKDIDGASKFAQKLISEVPSHFHSNNIIAIGGSLRALANAIMQIKN
                     HPLKLVHNFSYSYKDYGDLIEKIAFTGVLDLKNFPIKKDRYDTIREGAMIFCTLVKEL
                     QAKNIYTSGAGVREGIFITNLLKPCVKTKLLKAMPQQINIKFPNNFNPSLRSLQDRFA
                     KRSNQTTIKYVKELFEVLKPLHKVDDKYLFELITAAKLYNIGRSVGFYSEHSHSSYLV
                     KNGLNYGYTHEQKSLIASIIEYQGRQISDLGEFKDLLPDINDLRWLSFLLGLAKSLSV
                     SNTVSFKFINHALHIYGVKNFFMVKDNIKKLVKPTIFAITFD"
     gene            complement(16798..17412)
                     /gene="recO"
                     /locus_tag="RPW04_000757"
     CDS             complement(16798..17412)
                     /gene="recO"
                     /locus_tag="RPW04_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecO"
                     /protein_id="HDX6294862.1"
                     /translation="MQGYILKVQKVRDEDCLVFILSKDKLIKCYRFYGARHPVITQGF
                     KLDFELVQNGNFLPHLRGTMHLGFSWLFHRDRLLAWQNFMRLLYEHLRDVEDIDEFYY
                     SLLELCSYKFEKQNPKRIIIEAYLDILEFEGRLHKDLRCFVCDEIIDSNLTLTRGFLP
                     AHKRCIGKAAFDSKDIKTLFETKKCSHINDFYIDQIYYIVLEGL"
     gene            complement(17414..18334)
                     /locus_tag="RPW04_000758"
     CDS             complement(17414..18334)
                     /locus_tag="RPW04_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HDX6294863.1"
                     /translation="MIDFSSKPLFLAPLAGFSDLPLRGIVKKFGCDVTISEMISSNAL
                     VYENTKTVSMIEKNPLETPYIVQLAGNGSEIIKQAVQILNDIEGIDGIDLNCGCPVPK
                     VVKQNSGSALLNDIKTLCEIVETIKKTSNKHYTSVKIRLGFNSKTAHNIAKDIENAGA
                     DFICVHGRTRAGGYSAKVDYEAIGLVKQSVSIPVIANGDINAKNADEILRLTNCDGVM
                     IGRASIGNPWIFYEIKHKKPVDKNIKKQIVLEHFNEMLNYYGEHGIGIFRKHLHEYSK
                     GIDGASSFRNEINHISDPDDMLKILRSFFK"
     gene            complement(18331..19335)
                     /locus_tag="RPW04_000759"
     CDS             complement(18331..19335)
                     /locus_tag="RPW04_000759"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294864.1"
                     /translation="MKTRRYIFYSVVYIALVWVMTFSFINQDFSVNLFEYNINLPIAT
                     WIIIPITLFALLSILHMSYYGFKNFLDARAVKNDLQLYNTLAKEIYLGLESNKDFKTD
                     LFLSPSEITKSLSPWVDLGEPNLKNEELKSAYEISKKVKNGEACDIKKFKILKTNPLF
                     LQNEKNKIKADYKYAITLISSKNEINDAIYKEAYSALINFASYIELCKFNFAYTNDDI
                     FSLVKRYVKNENFEIASSELFTMINKNEFSCDEYIKLAILLKTKLDPDKLISMFDRLK
                     NEHSNAMEAYLYILYDLQMLDKLRESLASIEHGDFDKIKTLLFLRESGRLAPVDMFYK
                     "
     gene            complement(19332..19700)
                     /gene="dksA"
                     /locus_tag="RPW04_000760"
     CDS             complement(19332..19700)
                     /gene="dksA"
                     /locus_tag="RPW04_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HDX6294865.1"
                     /translation="MRQSDLEFFKNLLEERKIQINKNILDAADEINGLRQSGASDEFD
                     FASINADAILEHSISAKQRSELNEIDESLKKIANRTYGICDMCENEIDIERLKVKPNA
                     KYCITCREIIEKNNKNKDMQ"
     gene            complement(19710..20159)
                     /locus_tag="RPW04_000761"
     CDS             complement(19710..20159)
                     /locus_tag="RPW04_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009649352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDX6294866.1"
                     /translation="MQILVHCIQKKDDDFDNIKEYIKMSSKWADIKDINKFNSQIAKA
                     QSASKEQAHKAYDLAYEHCLNGYCIGLDEKGYHLDSVEFADLLKNSSQISFFIGGAYG
                     LSPQFKTKMNRLISLSKMTLAHKIAKLMLFEQIFRGLCINANHPYHK"
     gene            complement(20159..21040)
                     /locus_tag="RPW04_000762"
     CDS             complement(20159..21040)
                     /locus_tag="RPW04_000762"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HDX6294867.1"
                     /translation="MFGDFFSKIRRKQSDPSEAPSHWIKCNSCNSLMYYKEVEACFNV
                     CPKCGYHMRLSANKRVELIADRDSFVEFDSELRPVDPLKFVDKKSYKKRISESEEKSG
                     KTSSVISGEACIDSIPVQLVVFDFSFMGGSLSSVEGEKITRAVKRAIEKRQALIIVSA
                     SGGARMQESTFSLMQMSKTSAALKLLSDNKLPYISVLTDPTMGGVSASFAWLGDLIIA
                     EPGALIGFAGQRVIEQTIKASLPEGFQRAEFLLEHGLIDAIIPRSEHKKYLADMVRFF
                     MKEDANLQKPDFEPKAV"
BASE COUNT         7305 a         3039 c         3924 g         6888 t
ORIGIN      
        1 ttggagtagt attttgaaat ttctatatga tgaaaatgct aaaaatgaaa ttttagagat
       61 aaaaggcgat agttttaatc acctaaaagc aaggcgtcaa aacgtaggcg atagaattga
      121 tataagaaat ttaaaagacg gttatagtta tatttatgaa attattaaat ttgaacgaaa
      181 agccacttgc gagcttgtat ttaaatctct tacgaaaagt cttgatagtg atctggtttt
      241 agcttgggcc gtagtcgatc ctagcgtcat agaaaagact ctacctagtt taaatgagct
      301 cggagtgaag aaaattatat ttgtatatac tgatttttct caaagaaata taaagcttga
      361 ttttgataga tttcgtagga ttttgatagg atcgtcgcag caatgcggca gaaactccat
      421 tatagaattt gaaatttttg cagatataga tgagttttta aaagtacata aaaacgtgag
      481 tttgatagat tttggaggag acagcctaga taatgctaat ggaagcgaag tgctatttgt
      541 aggaagcgag ggcggtttta gcgcacaaga aagagttaag tttttaaatc ggtattgtct
      601 aaaatgtcca aatatcctta aatcaaatac cgcaataata agcgttgcga gtaagttctt
      661 ggtgtgatat ggctataatt ttacttattt ttgtctgtac tttacatgct tttatatgtt
      721 cggttcctgg atttattatc ggattttggt gggatataga tagatataaa aagtatatat
      781 tttttatttt ggtgctgatt ttatcggtat ttttagagat gaatagactc gatgctccat
      841 ttagcaatat agttattagc tttttagaag atattttggg ggcttatttt ggactgtttg
      901 tgttgctaag tttcaaaaat atggcaaaaa gaacgggtct gtgcaaaata tgcgataaat
      961 ttaggagaaa acatgaagag cttgacgata attgatactt ttggattttt tttcagactt
     1021 tattacgcaa tgagcggtct taaaagtcag agcggtaaac caagcggaat ggtgcatgga
     1081 tttgcaaatt ttatctataa tcttaagcaa gattttccga gtgattatat agtttttgct
     1141 ttagatagtg gtggaaaaac ttttagaagt cagattgatc ctaactacaa agcaaaccga
     1201 gttagccctc ctcaagagct aaaagatcag cttccagtat gtatagatat gatagaaaaa
     1261 atggggcttt gtagccttag agtagaaggt tatgaggcgg atgacatcat agctagtttt
     1321 ataaaaaata gcaaagatca agatctagaa ataagaatag taactcacga taaagatctt
     1381 taccaattga tagatgatag agtaagtata tttagtcctg caaaaaaaga gctttataat
     1441 cgtgatggtt gttatgaaaa atacggagtt tatcctgagc agataagaga ttttttagca
     1501 ttgtgcggtg atagcgcgga taatatccca ggggttaaag gtatcggaga aaaaggtgcg
     1561 aaaaaacttc ttgatgagtt tggaagcata gaaaatctat atgaaaattt aagtcaagta
     1621 agaaatgaga gaacgaaaaa tatgcttttt gaaagcaaag agaacgcttt tatttcaaaa
     1681 cgtctagcga ctttatatga tgaacttgaa acgccaaatc ttcaaaatgc tatttttccg
     1741 acgtctaatc ctttgctaaa agtcattgat acgttaaaag actattcgct tagtcgtctt
     1801 ttggcaacct taaaatctag cgatgaagat aaaattttga gttttactcc ggtactttta
     1861 acggatgaaa gtgagcttat aaggctttta gaagatatga atagcgaaat tatgattagt
     1921 tttgatacgg aaactacttc aacagatgcc aaaatagcta aaatagtcgg ttttagcttt
     1981 tgttttaatg agcaaaccag ctattacgtg cctttagctc atagctatct tggagtcgaa
     2041 tctcagatta gtatgaacag tgcaaaatgg gcgatatctc aaatttacaa aggttttgta
     2101 ataggacaga atttaaaata cgattttaga atagtagcaa ataactttgg tatcgagcct
     2161 cctaaaaatt actccgatac aatgatatta gcgtggttag atgatccaag cagcagcgtc
     2221 ggcatggata atttggccaa gaagctttat aattatgaaa ccattaaatt tgaaagtgta
     2281 gtaaaaaaag gcgaggattt ttctagtgtc gatctacaaa gtgcttcaaa atacgctagc
     2341 gaagatgcgt ggataacact taaattttat aaaactttca caaataaatt agaagaaagc
     2401 atgctaaata tagcaaaaaa cgttgaattt ccttttatat taacactttt tgatatggaa
     2461 agtaacggca taagattaaa tttagaaaaa ttaagagcgc ttatactgcg aaatgactct
     2521 gctttgcgag ctttgacaac tgaaatttat gagctttgcg agcagagatt taatataaac
     2581 tcaagtaaac agctaggttc tgttttgttc gattatctaa aacttcctgc gaaaaaaaag
     2641 acaaaaacag gttatagcac cgatgaaagc gtacttagtg agcttttaga tttacatcca
     2701 tctatagaaa aaatactgga gtatagagag ttatataaac ttcaaagtac atattgtgag
     2761 ccgcttttaa acttagccat aaaagatgag aatcatagag tttatacaaa ttttattcaa
     2821 accggaacag ccacaggaag actctcgagt aaaaatccaa atttacaaaa tatacctgct
     2881 cgcggaaatt tggcaaaaga tatgagggct gtttttgagc caaaagacgg ttatagtttg
     2941 atatctcttg actactctca gatagagctt agacttttag cgcattttag ttgcgatcct
     3001 gcgcttatag aagcttttaa aaatggagat gacatacatg caagaactgc tataagcata
     3061 tttggagaaa gtaatacgca aaatcgagcc atagcaaaat ccataaattt cggattgatt
     3121 tacggaatgg gatcaaataa attgagcaat gagctcagca tcgataaaaa gagcgcaaaa
     3181 gagtatattg atcgctattt taaggcattt tcgactataa aagatttttt agatagtata
     3241 aaaaatagag ccaaaaatga cggctttgta gaaacattga ttgggcgaaa gaggtatttt
     3301 gactttggcg gtgctactcc tatgcaactt gcgatgtttg agagagaagc tgtaaatact
     3361 aaatttcaag gcagtgcagc cgatataata aaaattgcta tgataaaagt aaaagatctc
     3421 ttaaatgatg atgcaaaaat gcttttacag atccacgatg agcttatatt cgaggtgcga
     3481 gatgaaatag cacctagctt tgctaaaaac gtgcaagagc ttatgcaaac agtagttgct
     3541 ctcaatgtgc ctttggttgc aaattggggt atggcgaaaa attggggtga tttaaagtaa
     3601 gattttttta cattaagtta tttttttgct aatttatgca ataattttta attctaatag
     3661 gcggagaatt tatggattta tcaacgatat tcggtatggt gctagctata actagtatat
     3721 ctgtgggtga tattttagaa ggtggtaatc cgcttcatgt attgcatatt agctcagttt
     3781 tgatagttat ccctacagcc atgttttcag ctgttacggc tacaaataaa aaatatgtta
     3841 aagctgcatt taaagagctt aaagtagcat ttaagggctc tggcgtagat atgtcaaagc
     3901 gtatagccga gatggtagag tatagtactt tggcccgtaa aaacggtatt ttgtctcttg
     3961 aacaaaaagc atcttctata gacgatgagt ttttgaaaac gggacttagt atgttagttg
     4021 atggtcaacc tatagatgag gttaaagaaa atcttgaact tgccatagag actactgaag
     4081 agtactatca tgaatgtgca catttttgga taaaaaccgg tgaaagttgc cctacatttg
     4141 gtctagttgg agcagttatg ggtcttatgt tagctcttca attgctagat gatccagcag
     4201 ctatggcagc aggtatagca ggagcattta ccgcgactgt tactggtatt atgggtgcat
     4261 atgcgttttt tggaccatgg ggtcaaaaaa tacttggaaa cgcaaaagat ataattaaag
     4321 aaaaaactat gataatagaa gccctagtag gtatagccga gggcgcaaat cctagaagct
     4381 tagagtcaaa attatttaac tttttagata aaaatgagcc tagagtgtct caatttaact
     4441 aaggtacaaa atggcaaaaa agaaaaaaca gcaagagtgc ccagcgggtg aaaaatgggc
     4501 tgttccgtat gcagactttt tatctttatt gcttgcttta tttatagctt tatatgcgat
     4561 atctgcagta aataccgcaa aagttgaagc tttaaaaacc gaaattataa aaatatttga
     4621 ttttcctgat tcaaaaggtg tcaaacaaag ttctaaaaac gctaaaagcg agaaacaatt
     4681 tgatggtcct ggtatcgcta tgcaaaatag cgacagcact tcggtcaagc aaaatacaaa
     4741 taacgaacgc tatagagttg cgcttgatca agctgaaaat caagttgcta tagatctgcc
     4801 tgcaggaatc aaatttgatc ctatgagtgc tgaaatttat aatccagata tgataaattt
     4861 tgtaaaaata atttctatga taataaataa agttccagaa tctgtttccg tagagataag
     4921 gggatatgcc gatgattata atgaatacgc aaaagattac aagttagcag cagatagagc
     4981 gtataatgta cttactatgc tgattgggaa cggtatagat ccaaaaaggc tgagattcac
     5041 atcgtttggt gatagtgttc agatcaaaaa tagcgattta aaactagcta aaatttattt
     5101 tagaatagat ataaaagata aaaagctaca aaaatctgta cttgatatag taaatgaaat
     5161 ccagtaaatt aggctgcaat ttatagctat tttgttatat ttatatgtat taaaatataa
     5221 tatacttata tataatttct taagtcatat tttagtcaaa ttttgataat cttataaaat
     5281 aaatctaaat ttaaggagat ataatggcag ttagaattac agatacctgt ataagttgcg
     5341 gttcatgcat tgatgagtgt ccagttagcg ccatagttga tgatagcgat aatccaacag
     5401 gcgaagatgc gtactatgta tatgccgata aatgtgtaga gtgtgtagga cacaatgatt
     5461 ctccggcttg cgcagaagcc tgtcctactg acggctgtat tgtatggagt gaggttatct
     5521 ctggccagcc aagcagaagc gaaataaccg ctgatgtaag aaatgccgct actcctgtat
     5581 tatgataata atttaaagcc acttttatgt ggcttactat ttttttaagt ttatttttga
     5641 tataatcgca attttgtaaa aatttcaacc atcattaaag gagatttcat ggaacaaact
     5701 ttatctataa taaagcctga tgccgtaaaa aaaggcgttg taggaaaaat aatcgataga
     5761 tttgaaagca acggattaag aatagcagcc gcaaaaaaac ttcaacttag cgtagaagat
     5821 gctaaaaaat tctatgaagt tcatgccgct agaccatttt atggagaatt agtagagttt
     5881 atgacaagcg gacctgtcgt agtaatggtg cttgagggtg ataatgcagt tgttaaaaat
     5941 cgtgagctta tgggtgcaac aaatccaaaa gaagctgcag ccggtaccat aagagcagat
     6001 tttgctgaga gcattgatgc aaatgctgtt catggaagcg atagtttaga aaatgcaaag
     6061 acagaaatag cgtttttctt tgcaaaaaga gaaatttgct aaactaagaa gataaatttg
     6121 aaaataccat ttgataaaat aacatctttg cttgttccat ttgaaatagt tattaatgga
     6181 ttaaaattta atggaaattt aaaaaaaatt aatccaaaaa tagtagagtg tattgctgtg
     6241 atatctggaa atttaaatta ttattgtgat agatgcggta aagatatgat tttaaatttg
     6301 aatgaggatg taaaattatc tttaagtaac ggtatttata aagatttaga aaacgattta
     6361 agtgatacta ttgaatttta tgatggcgag attgacatcg atgaaatttt tgaaagcgaa
     6421 atagaagctt ataaaagcgg atatttttac tgtgatgaat gtaaaatttt aaaaggagaa
     6481 taaaatggca gtacctaaac gtagagtgag ccacacacgc gctgcaaaac gcagaactca
     6541 ctataaagta actcttccta tgcctgtaaa agataaagac ggtagttgga agatgccaca
     6601 tcgtataaat aaaacaaccg gcgagtattg atatacaaca atgattagta tagcaataga
     6661 cgctatgggc ggggattttg gtccagaacc tataataact ggtgtactcg acgctttaaa
     6721 acatagaagt tttaatgctg ttttagtagg tgatatacaa aagatcaaac cccttatacc
     6781 tgaagattac gcaagatttg taacttatat cgagtctagc gaagtatttt ctatgggcga
     6841 gagtgctact gatgcactta agcgcaagga aagcagtatt tttaaagcaa ttgagcttgt
     6901 aaaaaacggc gaatgcaaag ctatagtttc agcaggacat agtggagcta ctatgagttt
     6961 agcaacttta agaatcggta gattaaaaaa cgttgcaaga cctgctatag ccacacttat
     7021 gcctacttct ttaaataaaa aaacacttgt tcttgatgtc ggtgcaaatg ttgattgtaa
     7081 agcagaacat ctatttcagt ttgccataat gggagaatct tacgccaaac aaataatgag
     7141 agtaaaaaac ccgaaagtag ggcttttaag taatggcgaa gaggattgta aaggaaatga
     7201 agtcacaaaa gaagcatttg aaatgatgtc aaaactcgat agttttatcg gaaatgttga
     7261 aggaaatcag atttttgatg gaagtgttga tgttattatt tgtgacggat ttgtcggaaa
     7321 tatcttactt aaaactagtg aaggcgtagc tagcgctata tcaaaaatca taaaagaaag
     7381 tgttaagaag tcaccttttg ctactgttgg tgctttgctt atgaaaagag tttttaaggc
     7441 tttaaagatt caaatagact atgacgagta cggaggagct ccgcttttag gggttaaaga
     7501 ttgtgttatt ataagtcatg gtaaaagtag tccaaaagcc gttaaaaatg ctattttcca
     7561 agctctaaaa tttgctgaat cagacataaa tagagttata gaagatgagc tttcgcactt
     7621 tgttaggtag caaataaatg aaaaaagcat cgataatttc agttggagct tatattccaa
     7681 aagatatttt aactaatttt gaccttgaaa aaatggttga tactagtgat gaatggatag
     7741 tcaaacgaac aggtataaaa actaggcatt tagcaaaaaa tgaagtcact agtgatctag
     7801 catataaagc ggctctgatg gccatacaaa gagccggtat agacaaaaat gatatagatg
     7861 cggttatctg cgcgactatt acgcctgatt atttttgtat gccctctact gcttgtaaag
     7921 tggcttcaaa tttaggtttg tttgatgtaa ctgcttttga tataagtgcc gcttgtaccg
     7981 gatttatcta tcttttagag attgcaaaat ctctcgttga gagtggagct aagaaaaatg
     8041 ttcttataat aggagcagaa aaattaagct caattattaa ttggcaagat agaagcactt
     8101 gtgttttatt tggcgatgga gcaggcgcgg ctatagttag ctcttcggat gataattata
     8161 taatagatgt tcatacatca agcgacggta gcaaaggaaa tttattaata actcctggtt
     8221 gcggcattgt tcatccagcc aacaaagata ctatcgataa aaagctaaat tttttacata
     8281 tgtctggtaa tgaggtcttt aaaatagctg ttaatacgct agctaaagat gttgttgata
     8341 ttttagaaaa aaacagtgtc agcagcaaag atatcgatct tttcataccg catcaagcaa
     8401 atttaagaat tatagaagca gtaaaacagc gtttggattt cacagatgag cagtgcgttg
     8461 taactgttgt ggattatggt aacactagct cggcttccat acctatggct atgaatgatg
     8521 cttatgaaga cgggcgtctt aaacaaggta gtttaatcct tttagacgca tttggcggcg
     8581 gttttacatg gggttctgct ttgttaagat tcggcggaaa ataagccatc aaaataacaa
     8641 ccaaatttaa atatttttat gctataatta aattcaacta aattttaagg aaaaatagtg
     8701 atttatgaag ggcaagatgt gcttatatct gagtgtatgg ggattttgca aggattagag
     8761 caagactaca aaaaatacgg taaaaatctt gcaaaagagt cgcaaaaaca gattgatcct
     8821 tatgatttag atgatacttt agaattgatt tttgatgcga tttttaagac aaatttagat
     8881 aaagaagcct cattaaaaca gataaacaaa tgttttggta acgatgaaac ttatgctaat
     8941 tattttattt tgaaagtttt atttcatctt ttacatcgtt ttagtattta tatttcaaaa
     9001 tcagatttaa acagtacaat ttatataata tatctagaaa atgcgataga tgcttttact
     9061 caagttttaa tgaaaacaga agctaaaacg aaaatttcaa gccctcagag ttttaaattt
     9121 ggaactagtg gcggatttat gttatttggc gatataatag acgagtttag agcggctttg
     9181 cgttcaaact caagcttaag atttttaaat ttatactatg gcgtaaatgt cagctgcgat
     9241 gctaaaatag ctagcataga agatgataaa gtgcttttta aggtgaattt gatgcagatt
     9301 ttggctatga aagaagaaga aaatgcatac atactaaaag gcgataactt agtaagcaac
     9361 gttaaagctg atatattaag tataaattta tctaataata ctgttttatt aaataacttt
     9421 gtacgaatgg aaaatatgtt tgcaaaccaa agaaaatttc ccagagtaca tccaaatcaa
     9481 catacaaaag ttatattatc aaataaattc ggagtaagta tagagggtaa attatacgat
     9541 atttctcaag gcggaatagg cgtggtaagc atccaaaacg gtggatttaa aagcggcgag
     9601 gagcttatgg ctaagtttag tttaactatg ccaagaacta aagaagttat cgatgtttat
     9661 ttagagttga atttagtagt tgcattgaat tatcaaggct ctatgcgtta ctgttgtgaa
     9721 atagtaaaac ctcaatctat cacggaaaaa atagttgaat tttctaagtt aagagttaaa
     9781 gatacgctag atgaattgca acaaaaagta gaactttata gatgaaaatg cctgaaagtg
     9841 gcgaatttta tctaggactt agtgaaaata cgccatatat ttatgatagt aaagatcttc
     9901 ttactcacgc agctatcata ggaatgaccg gaagtggtaa aacaggtctt ggtataagtc
     9961 tgttagaaga agcttcatta aatcaaattc caactataat aatagaccca aaaggcgata
    10021 tgacgaattt atgcttagca cttagcagcg aagacgagtt tatagaagtt tgtgcagata
    10081 aaaacgtcgg aagtagcgtt tatgagcagt ataaagctgg tcttgagagt agttttgaga
    10141 attttgaaag agttaaaaaa tttaaaaata gctcagtttt taagatattt actccaaaaa
    10201 gcaatgcggg tcttggagtt agtctgctta gtgattttaa cgcacctaaa tttgatgatt
    10261 ttgagagttt aaatagctat attatcggaa tttgtggttc tattttatct ttagtgggtg
    10321 ttaaaaatga tgattttagt tcgcccgaga tgcttatttt acaaaatata ttttttaata
    10381 gatttagtgc aaaaaaagat cttagcatag ctcagttgat agaagatatc ataaatccta
    10441 aatttaaaaa aataggtgtt tttgatgtag agagttttta tccggccgat aaaagagccg
    10501 acttagctat gaaaataaat gcgcttgtag ctagtcctga tttttctctt tggtgtagcg
    10561 gagagaaatt agatatctca aatatgcttt ttgaaaatgg caagccaaga tcaaatatat
    10621 ttacaatatc ccatttagac gatgctagta gaatgttttt cgtaactatt ttattaaatg
    10681 agatggtttc ttggatgaga ggtttagaag gaacgcataa acctagagta gtgctatata
    10741 tggatgaaat atttggatat tttcctccaa gctcaaatcc tcctagcaaa ctagctatgc
    10801 ttactttgtt aaaacaagca agagcttttg gaatttgtgt tgttttatct acgcaaaatc
    10861 cagtagatat agattacaaa ggacttagta atataggaac gtggtttata ggaagattac
    10921 aaacagctca agataaacaa aatgtgatta gcggacttag cggagttggt aaaactagcg
    10981 ataaagagat tctaaatact ctttcaaatt taaaaaagcg ccagttttta gtaaaaaata
    11041 tccacgatac aaatttacag atcataacta ctagatgggc gcttagctat ttaaaaggtc
    11101 cattaaataa aaatgatatt tcaaatctta tgaagcattt tgagattaaa aatggatcat
    11161 ctataatgct taattcaagc gctatattaa atccagatat agttcaaatt tatgaatatg
    11221 gcaactcaaa taagcttttt tgtcatctgc tcggcacggc aaaagtgaga tttattagca
    11281 gtgatgacga gcttataaaa gatagaattt tttgtttaaa agcagatagc gatgagctag
    11341 actggagcaa tgctgaagaa atttcggtct caaatttcag ctgtgaaaaa tatgaaaata
    11401 tagagctttt agatgcccca agatctattt taaatgcaaa aaatttaaat gaatttgtaa
    11461 aatcatttac cgagttttta tatactaatg aaaaaatagt gctatataaa gcatttgata
    11521 tagtttcaaa tttaaatgag agcaaagatc agtttgtttt aagagtaaag ctcagagcgg
    11581 acgaactttt aaaagaacaa aaaactttgc ttatgaataa atttgaaaaa gagaaaagca
    11641 ttttggaaaa aagattatta aatgctaaaa atagtttaga aaagaagaaa aatatagcaa
    11701 ataaaagcgg tatatttgca gctatcgaga taataagcgg agttttgtct gctgttttta
    11761 gaaagagatt aagtagcaca aaaatcttga gcagtacaaa aaaagctact gacgtttttt
    11821 caaaacacga tgatatgtat gcatctaaag agactatgca gagtattttg aatgaaatta
    11881 atgagttgca aagtagttat gaaaccaaaa tatcagaact aaaagagagt tttgatattg
    11941 cgaatttaca gatagatgaa aaaatactgc gcccaaaaaa gagtgatatt ttaaatgaaa
    12001 aagtatctgt tttatggaag agttaaagga gtaaaatgaa cgaaaatatt gttgcttatg
    12061 tgttggctta tcttattggt gcgatacctt ttggtttgat tttgggtaga attttcggta
    12121 aagttaatat aactaaagaa ggaagctgca gcatcggagc cacaaatgtt ttaagagttc
    12181 ttaaaagttc aaacccgaat ttggcaaaaa agcttgcagt actaacagtc gtttgcgatg
    12241 cttttaaagc atttattcct atggttgtag caaaagttgt ttttgattta agtgatcaaa
    12301 ctatctggac tatggctgtg ttatcagtga taggacattg cttttcgccg tatcttaaat
    12361 ttgagggcgg aaaaggcgta gctactggag ccggagcgct tatttatttt ttacctttag
    12421 agatcatttg cgctttggga atctggttta taatcggaaa agtacttaaa atttctagtt
    12481 tggcctcgct tttggcactt tttactttga taggaacatc ttttatattt cattatgaaa
    12541 tgccggtgat aaatactcac gctcctattt ttatcatatc gtttgtggtt ttatataaac
    12601 acattccaaa cataaaaagg cttttgagcg gttctgaaaa gagggtgatt tgataactgt
    12661 ttttgtggaa gattttaaat tcaaaacgat aatcggactt ttggcttttg agcgggttaa
    12721 acgccaaaaa ataagagttg atatgggttt taaagctgat gaatttattg attatgcttt
    12781 tgtgtgtgaa cacactagaa atgaatttga aaaaatgaaa tttaaaaaag ttgaagaggc
    12841 tttgcaatat tttaaaaata attttaaaga aatttttccg tctcttgagt atttttatat
    12901 gaaaatttca aaggtaaaaa tcatttcaaa tgccacggtt ggagcaaaaa tcgagcagct
    12961 ttattaaatt aaatttaaaa taacttgaaa aattgcttaa tttatggtac aatctcgaat
    13021 aaatttgcgc tttaaggaaa gtataatgag aattttgata gtagaggatg aggttacgct
    13081 taacaaaacc atagcagaag gtttgcagga atttggttat caaacagata gttcagaaag
    13141 ttttaaagac gctgaatatt atataggtat tagaaactat gatttagttc ttagtgattg
    13201 gatgcttcct gatggagatg gcgttgatct tataaatgtc atcaagcaaa agagtccgcg
    13261 cacttcagcg gttatcatat ctgctaaaga tgataaagag agtgaaataa aggccttaag
    13321 agccggagcc gatgattata taaaaaaacc gtttgatttt gaagttttag tagcccgtct
    13381 tgaagctaga ctaagattcg gcggtacaaa tgttattaaa atagacgatt taattattga
    13441 tccagatgaa gaaaaaataa catatcttgg tcaagaaata gagttaaaag gtaaaccgtt
    13501 tgaagtttta actcatcttg ctagacacag cgatcaaata gtaagcaaag agcagctttt
    13561 agatgctatt tgggaggagc cggagcttgt tactccaaat gttatcgaag tagctataaa
    13621 ccaaatacgc caaaaaatgg ataaaccgct aaacatctca actatagaaa ctgtaagacg
    13681 tcgcggatat agattttgtt tccccaaaaa agcttaaggg ctagatttgc tctacaatta
    13741 gcatctgctt ctacgatgct aattgtaatc ttttcggtga tgttgtatca ctatataaaa
    13801 ataaccattt ttgaaaatat agtacaaagc ttgactatag aagcaaataa tatacttgac
    13861 tcaaaagaac ttcttcaaat aggtgaacta gagttttact acccacaatc tcaaaatttg
    13921 acagtcattg gagttgaaga aaataccgat aacttatcaa gacctaaatt tattcagagt
    13981 gaagatgaaa atagtactta tctgacgctt tattatccat ataaagataa tatggtatta
    14041 gcgctcaaaa aaaatactac tgaatacagc agcgtcgtaa atcaagtttt agtggatata
    14101 ctaattataa atgcaactgc tatatttttg atactttttt atgcgttatt tttatcaaga
    14161 atgctgcttt tacctataaa aatgcttagc ttgagacttg gccagttaaa tgaaagattt
    14221 ttacaagaag ttagtataga tgaacttcca gatgagttta aacctcttgg tgatgggatt
    14281 aataggctta taagtagaat tttgactttt gttcaatatc aaaaagaact ttttgtcgga
    14341 gccgctcatg agctaaaaac acctttggcg gttatgaaaa ctaagaatga agtgacttta
    14401 ataaaacaaa gagagccgga aaaatatata gaagccctaa aaaataataa tgagtcaata
    14461 aatcaaatga ataaaatgat cggttctatt ttagagatcg gtcgtcaaga aggtgctcag
    14521 tttgaacaac ctttaaatgt agacataatt gcgtatttaa atgaaatcgg aaataacttt
    14581 ttgatattgg caaagggcga gggtaaaaat ataaaaatga gtctaaaacc gcagacttta
    14641 aagatgtttt tgcaacctac tttattttta catgttatac aaaattttgt tcaaaacgct
    14701 attaaatttt cacctccaaa tgcgactata gagattaaat caaacttatt aaataatgaa
    14761 tttatagtaa aagtagtaga cgagggtcct ggaatagatg aaaataaaga tctatttgct
    14821 ccatttaaga gatatggaga caaaggcgga gccggactag gattattttt agcaaaggga
    14881 gctgctcagg cactcggcgg acgtatagag ataagaaata gaacagatag aagtggcgct
    14941 atagctactt ttatactacc tataaatacc aaaaatagaa aaatgcaaaa aaacatttca
    15001 aattcaaagt ttttaaagta aaaatattgt ataaagtggc ttttaaaata gtactgaaag
    15061 gtttgagatg tctcttatga taactaaaga ctgcatcagt tgtgatgctt gccgcgaaga
    15121 gtgcccagat gaggctatat atgaagatga tcccacatat atgatagatc cagatagatg
    15181 tagcgagtgt ataagtgact atgctgagcc tgcttgtata gttatctgtc ctgttgattg
    15241 tatagttcca gatcctgata atatagaaac tccagaagag ttaaaattaa agcacgaaca
    15301 gtatttagaa gggaattaat gccaaaaaga gtagcagtca tagatcttgg ttcaaactcg
    15361 gctagaatgg cgatttttga gcgtactagt aggcttggat tttatatatt acgcgaatat
    15421 aagataaaag ttaggcttgg cgagggtgct tatgaaaatg gcggagtttt gcaagatggc
    15481 gctatggata aggtatttta cgcttttagc gagttcaaac attttttaaa tttatatggt
    15541 gtaaataaag ttttgtgcgc aggaacttct gctcttagag atgccccaaa ttcaaattta
    15601 tttatcaaaa gagtgcaaga taagttgggt cttggactaa aagtcataga tggtcaaatg
    15661 gaggcttttt atggcggaat agcggctata aatttactaa atccgttgaa agaagcgact
    15721 actatagata taggtggcgg ctctactgaa ttagcgaaga tagaagacgg taaaattata
    15781 gatgttatat cattgaatgt aggtacggtt agattaaaag agctattttt tgataaaaaa
    15841 gatatagacg gcgcttctaa atttgcacaa aaactgattt ctgaagtgcc cagtcatttt
    15901 cattcaaata atataattgc cataggaggt agtttaagag ctcttgctaa tgctataatg
    15961 cagataaaaa atcatccatt aaagcttgtt cataattttt catatagcta caaagactat
    16021 ggtgacttga tagaaaaaat agcctttacc ggcgtactag atctaaaaaa ttttcctata
    16081 aaaaaagata gatatgatac gattagagaa ggagctatga tattttgtac tttagtaaaa
    16141 gagttgcaag caaaaaatat atatacaagc ggagcaggag ttagagaagg gatatttata
    16201 acaaatttgc ttaagccttg cgtaaaaact aaacttttaa aagctatgcc tcagcagata
    16261 aatataaaat ttccaaataa ttttaatcct agtcttagaa gtttgcaaga tagatttgca
    16321 aaaagaagta atcagactac gataaaatac gtaaaagagc tatttgaagt tttaaaaccg
    16381 cttcataaag tagacgataa gtatcttttt gagcttataa ctgctgcaaa actttataat
    16441 atcggcagat cagttggctt ttactctgag cattctcata gtagttattt agtaaaaaat
    16501 ggactaaact acggatatac ccatgagcaa aaatctctca tagcatctat catagagtat
    16561 caaggcagac aaataagcga tttaggcgaa ttcaaagatc tacttccaga tataaatgat
    16621 ttaagatggc ttagtttttt actcggtctt gctaaatcat tgagtgtatc taatacggtt
    16681 agttttaaat ttataaatca cgccctgcac atttatggcg taaaaaactt ttttatggtc
    16741 aaggataata tcaaaaaact ggtaaaacct actatatttg caataacttt tgactaatta
    16801 taatccttca agaactatat aataaatttg gtcaatgtaa aaatcattta tatgggaaca
    16861 tttttttgtt tcgaaaagag tttttatatc ttttgaatca aacgcagctt taccgataca
    16921 tcttttgtgt gccggtaaaa atcctcttgt tagggttaaa ttcgaatcga ttatctcatc
    16981 acatacgaaa catcttaaat ctttgtgtag cctaccttca aactcaagta tatcgagata
    17041 tgcttctata attatacgtt ttggattttg tttttcaaat ttatatgagc ataactctaa
    17101 aagagagtag taaaactcat ctatatcttc aacatctctt aagtgctcat acaaaagtct
    17161 cataaaattt tgccatgcta gtagccgatc tctatggaat aaccatgaaa atccaagatg
    17221 catagttcct cttaagtgtg gtaaaaagtt tccattttgc acaagctcaa aatcaagctt
    17281 aaagccttga gtgataacag gatgtctcgc accataaaat ctgtagcatt ttattagctt
    17341 atctttagat aatataaata ctaaacagtc ttcatcgcgt actttttgta cttttaagat
    17401 atatccttgc atcttacttg aaaaatgacc gcaatatttt tagcatatca tccggatctg
    17461 agatatgatt tatctcattt ctaaatgaac ttgctccatc tatacctttt gagtattcat
    17521 gcaggtgttt tctaaatatt cctatgccgt gttcgccata ataattcagc atttcgttaa
    17581 aatgctctaa aacaatctgt tttttaatat ttttatctac tggcttttta tgttttattt
    17641 cataaaatat ccaaggattt cctatacttg ctcttcctat catgaccccg tcgcagttag
    17701 taaggcgcag tatttcatct gcgttttttg catttatatc gccgtttgca attactggta
    17761 tcgacacgct ttgctttact aaacctatag cttcataatc gaccttagca ctgtatccac
    17821 cggctcttgt tctaccgtga acgcatatga aatcagcacc agcgttttct atatcttttg
    17881 ctatattgtg tgcggtttta ctattaaatc ctagacgtat tttaactgaa gtatagtgct
    17941 tattagatgt ttttttaata gtttctacta tttcacatag cgtttttata tcatttagca
    18001 gagcggatcc cgaattttgt tttactactt ttggaacagg gcaaccgcag tttaaatcga
    18061 ttccatcgat tccttcaata tcatttaaaa tttgaactgc ttgtttgata atttcagaac
    18121 cgtttccggc taattgcact atatatggtg tttctaaagg atttttttct atcattgaaa
    18181 ctgttttggt attctcatat accaaagcgt ttgagcttat catttcgctt attgtaacat
    18241 cgcagccaaa tttttttaca attcccctaa gaggcaggtc tgaaaaacct gccaaaggcg
    18301 ctagaaatag tggttttgaa ctaaaatcta tcatttataa aacatatcta cgggagctaa
    18361 tcttccactt tctctcaaaa atagtaatgt ttttatctta tcaaaatctc cgtgttctat
    18421 agaagctaaa ctttctctta gcttatctaa catttgtaaa tcataaagta tgtataaata
    18481 cgcttccatg gcatttgaat gctcgttttt tagtctatca aacatagata taagcttatc
    18541 tggatcaagt tttgttttta gaagaatggc tagtttgata tattcatcac agctaaattc
    18601 gtttttgttt atcatagtaa atagctcaga acttgcaatt tcgaaatttt catttttaac
    18661 atatcttttt acaaggctaa atatatcatc atttgtatag gcaaagttaa atttacaaag
    18721 ttctatatag ctcgcaaagt ttataagcgc gctataagct tctttataaa ttgcgtcatt
    18781 tatctcattt ttactagaga tcaaagttat agcgtatttg taatcagctt tgattttatt
    18841 tttttcattt tgcaaaaata gaggatttgt tttcaatatc ttaaattttt ttatatcgca
    18901 agcctcaccg tttttaactt ttttagatat ttcataagca gattttaact cttcgttttt
    18961 taaatttggc tcaccaagat ctacccaagg agaaagtgat tttgtgatct cgctaggact
    19021 taaaaataga tctgttttaa aatctttatt tgattcaaga cctagatata tctcttttgc
    19081 caaagtatta taaagctgca gatcattttt aacggctctt gcgtctaaaa agtttttaaa
    19141 accgtaatag ctcatatgaa gtatactaag tagtgcaaac agtgttatag gtataatgat
    19201 ccatgttgct ataggtaagt ttatattgta ctcaaacaga ttgacgctaa agtcctgatt
    19261 gataaatgaa aatgtcatta cccatactag agctatatat acaacagaat aaaatatata
    19321 tcttcttgtt ttcattgcat atccttattt ttattgtttt tttctattat ttctcgacaa
    19381 gttatacagt attttgcatt aggttttact ttaagtcgtt ctatatctat ctcattttca
    19441 cacatatcgc aaattccata agtgcggttt gcaatctttt tcaaagactc gtctatctcg
    19501 tttaactcag atctttgctt agcagatatc gaatgttcta gtatagcatc agcgtttata
    19561 cttgcaaaat caaactcgtc gctagcgccg ctttgtcgta agccgtttat ctcgtctgcc
    19621 gcatcaagta tatttttatt gatctgaatt ttacgttcct caagaagatt tttaaaaaac
    19681 tctaagtcgc tttgtctcat ctgcttcctt tatttatgat atggatgatt tgcgttgatg
    19741 caaagtcctc gaaaaatttg ctcaaaaagc attagttttg ctattttatg cgctaaagtc
    19801 atctttgata ggctgattaa tctgttcatc tttgttttga actgaggact aagtccataa
    19861 gctccgccta tgaaaaatga aatttgagag ctatttttca ataaatcggc aaattctaca
    19921 ctatctaggt gatagccttt ttcatcaagc ccaatgcaat acccattaag gcaatgctca
    19981 taagctaagt cgtaagcttt gtgagcttgc tcttttgacg cactttgggc ttttgctatt
    20041 tgagagttaa atttatttat atcttttata tcagcccatt tagatgacat cttgatatac
    20101 tcttttatgt tatcaaaatc atcatctttt ttttgtatac aatggactag gatctgcatc
    20161 acacagcctt aggctcaaaa tccggctttt gtaaatttgc atcttctttc ataaaaaacc
    20221 taaccatatc ggctagatat ttcttatgct cacttctagg aattatagca tctataagtc
    20281 catgctctag taaaaattcg gctctttgaa atccttctgg gagactagct tttatagttt
    20341 gttctataac tcgttgaccg gcaaatccta taagtgcacc tggttcagcg atgatcaaat
    20401 ctccaagcca tgcaaatgag gctgaaactc cacccatagt aggatctgtt aaaactgaaa
    20461 tataaggcaa tttattatcg cttaaaagtt tcaaagctgc acttgttttg ctcatttgca
    20521 taagactaaa cgtactttct tgcattctag ctccgccgct cgcgcttact attataagag
    20581 cttgtctttt ttctatggct cgttttactg cgcgagtgat tttttcgccc tcgacagagc
    20641 taagacttcc gcccataaaa ctaaaatcaa atacgacaag ctgcaccggt atagagtcta
    20701 tacaagcttc accagatata acagaactcg ttttaccgct tttttcttcg ctttcagata
    20761 ttcttttttt ataggatttt ttatctacaa atttaagtgg atctactggt ctaagttcag
    20821 agtcaaactc aacaaaacta tctcgatcgg ctatcaactc tactcttttg ttcgcgctta
    20881 aacgcatatg ataaccgcat ttagggcata cattaaaaca tgcttctact tctttataat
    20941 acattaaaga gttacagcta ttacatttga tccagtgact tggtgcttcg cttggatctg
    21001 attgttttct tcttattttt gaaaaaaaat caccaaacat ttttttcctt agcttttaaa
    21061 aattggtcga ttataaccaa ctttagccaa atttttcttt aaaacagtag ataatacact
    21121 gcaagtaaat ttaaattaaa attaaaatta caataa
//
LOCUS       DAPPKW010000022        20561 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.022, whole genome shotgun sequence.
ACCESSION   DAPPKW010000022 DAPPKW010000000
VERSION     DAPPKW010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20561)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20561)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20561
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.022"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(164..2029)
                     /gene="mnmG"
                     /locus_tag="RPW04_000763"
     CDS             complement(164..2029)
                     /gene="mnmG"
                     /locus_tag="RPW04_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDX6294868.1"
                     /translation="MNYDVIVVGGGHAGIEASLAAAKMGAKTLLITILAEQIGAASCN
                     PAIGGLAKGHLVKEIDALGGQMGLTTDACGIQFRLLNESKGPAVRGSRAQIDMDRYRV
                     YMRNLLLNTPNLEVTQEIATEILTKDNNIIGVKTHLDNNYGTKKLIITTGTFLNGLIH
                     VGFNKLEAGRVGELSSKSLSASLKSLNLEMGRLKTGTCPRVLAKSIDFSVLERQDGDQ
                     DPTPFSFRTKEFNKTQLPCYIAYTNEKTHEIIRSNFDRAPLFTGQIEGIGPRYCPSIE
                     DKINRFGDRERHHLFIEPQTREATEYYINGFSTSLPYDAQVEMLRSVKGFQNAKIVRH
                     GYAIEYDYVSPTELKHTLETKKINGLYLAGQINGTTGYEEAAAQGLMAGINAALNLKT
                     REPLILRRDESYIGVLIDDLVTKGTKEPYRMFTSRAEYRLLLREDNANLRLSKYGYNV
                     GLLPKEAFEEMLKLKSNLEKGMEILLTKDMSPNKENLEFLASIDEDIINEKVPLQKIA
                     ARKSFTIEKLRKLNEFFLNLDDKSLNQILTEAKYYHYIAQQQIEVEKMKGLLDIKIPK
                     SLEFKSISGLSNEVVEKLNKFAPPTLAAASNISGITPVAIDILHIAIKYHCQKTK"
     gene            2132..2755
                     /locus_tag="RPW04_000764"
     CDS             2132..2755
                     /locus_tag="RPW04_000764"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDX6294869.1"
                     /translation="MFNGLIREIAEVIKFDGKTLALKANYKPNLGDSIAVNGACLSVT
                     SVSETGFSVELSSESKEHLALQNYRGKVHIEPAMKLSHRVDGHLMQGHIDAVGEIIKI
                     ETLQSGTNFYIKLPSNVMHLVSNKGSIAVDGVSLTINEVFKDSIRLTIIPLSLKDSLF
                     GEFKVGRKVNVETDLLARYADRILSMKDKKNSGDLSWQEADFYASLY"
     gene            2739..3428
                     /gene="pgeF"
                     /locus_tag="RPW04_000765"
     CDS             2739..3428
                     /gene="pgeF"
                     /locus_tag="RPW04_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HDX6294870.1"
                     /translation="MLVCIDGNDVLAGFSTKDGGVSSGIYESLNLATHVGDDIKNVFE
                     NREILKQKIGAKKLIFMDQIHSDIVCEISSIDDEISPCDAIITKLKNVALCTITADCS
                     PVLVYDKFTKKIAAIHAGRAGVVSHIVSKTIKKMGSESLNLKVIIGANISGNCYDIGD
                     LDLGEFNKFKNKTKFDMNAALKYELDSLGVRDYEFSGICTHCDERFFSYRKDGVTGRF
                     CGFIMLKDGLS"
     gene            3425..3646
                     /locus_tag="RPW04_000766"
     CDS             3425..3646
                     /locus_tag="RPW04_000766"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294871.1"
                     /translation="MISAYKEFKQEDLELYNISLNAKKFSVDFTSNMRILEILFAPRE
                     IIIDESNLEKIAEIFTALEEIRDNSQLSK"
     gene            3799..4575
                     /gene="rpsB"
                     /locus_tag="RPW04_000767"
     CDS             3799..4575
                     /gene="rpsB"
                     /locus_tag="RPW04_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDX6294872.1"
                     /translation="MVTMRDLLECGVHFGHQTRRWNPKMKKFIFGERKGIYIIDLQKT
                     IRYFRYTYNIVRDAAAEGKTVLFVGTKKQAGVAIKEYAEKCGMPYVNHRWLGGMMTNF
                     GTIKQSIRKLEVIEAMEEDGSINLLTKKEALMLRRKKEKLLATLGGIRNMKSLPDMVF
                     VIDTVKEKIAVAEANKLRMPVVAPIDTNCDPDIVDFPIPGNDDAIRSVQLFCQEMAEA
                     INEGKALRDQDEAEQVEPVSQEEKDEVVAEAMSEADFEEQ"
     gene            4575..5639
                     /locus_tag="RPW04_000768"
     CDS             4575..5639
                     /locus_tag="RPW04_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDX6294873.1"
                     /translation="MEISASMVKELRESTGAGMMDCKKALQESNGDMQKAVDILREKG
                     LGKAAKKADRLASEGLVSVVVSENNKTATITEINSETDFVAKNATFVDLVKNTTIHVQ
                     TNSINTVEELKESSINGVKFEEYFQSQIATIGENLVVRRFETIKAAKGGIVAGYIHSN
                     SRVGVLIGAACDSEETAAKIHDFLRNLCMHAAAMKPQVISYKEFDADFVEKEYLALKG
                     ELEKENEELVRLKKPLHKIPEFASRAQLTDDIIAKATENLKAELKKQGKPEAIWDKIL
                     PGQIDRYIADNTQLDQRLTLLGQFYVMDDKKTVEQAIADEAKKVGGKVEIVSYVRFEV
                     GEGLEKKSEDFAAEVAAQMA"
     gene            5642..6286
                     /locus_tag="RPW04_000769"
     CDS             5642..6286
                     /locus_tag="RPW04_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6294874.1"
                     /translation="MLKAVNLSHKFDYPLFNDLNLEIFPSTTTAITGVSGSGKSTILH
                     ILSTLLKPVGGEVIYNEKSIYNINESELLKIRRLDFGIIFQAHYLFKGFNAYENIELA
                     NILSGHKIDTELLEKLKIDHVINQKIGELSGGQQQRVSIARVMSKKPRIIFADEPTGN
                     LDKNTANEVMNVIFDYVKNENAALVLVTHDESLASRCDDIFLLQDFKLNRVCSY"
     gene            complement(6323..8389)
                     /locus_tag="RPW04_000770"
     CDS             complement(6323..8389)
                     /locus_tag="RPW04_000770"
                     /inference="COORDINATES: protein motif:HMM:TIGR01783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDX6294875.1"
                     /translation="MKKFVFFSIVAVVVIFANDEYNATLPPTKIESKSDVDTLKGYVG
                     YDRAQGSRTDLLLKETPQTIDILDISRNKSYGQNDLSSILEGTAGIDTTYDMRADNIF
                     VRGFNADAGDIYRDGVRDSGQVRRSTANIERIEILKGPNSVLYGRGAGGGVINMVSKV
                     ANFNSKSLATVGYGSYDNRYFGLDMNHVFNENFAARVVGDLRDSNSYRDYIEEKSKMI
                     SPSIIYYKDNFSHLLEYTYDYAKRVPDRGPTKDVYEQMGIDYKKTFARQGDIVEDRLQ
                     MYRSKLNYDFSDKMYIEWVLAYRKANQSFDHYFGGKYDPKTKLLSQSYAWQNTDNSTF
                     LNSISANFDFDTFGKRNKLLLGYDFQIEKREPLIGIKRNQNIDPFSPRISWGRINTPA
                     ASISNKHKATNHGVFVQELFYITDSLKFALGGRLDEYKFSSKDIKNKSNEYKGDNFSY
                     NYGLVYDINSQHTAYAAYNKSFSPYGGNGYVGISTTTDPKGFNTKPENSQQYEVGIKS
                     DWLNNSISTTLSTYVLEHYNIRYRPDPINDPFTYAIRGKEQSKGVEFSAIGKISDNVY
                     IRSSVGFMKARVKKDKQNPLNEGRHLSGTGNFNTNVFIRYIPIKDLYAEIGAVHSSKK
                     FYYSSDGKEINLDGFTRYDALVGYNYKNLNLSFAVQNLFDKKYWRSSAMPGTPRNFMA
                     NISYKF"
     gene            8575..9348
                     /gene="fliR"
                     /locus_tag="RPW04_000771"
     CDS             8575..9348
                     /gene="fliR"
                     /locus_tag="RPW04_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HDX6294876.1"
                     /translation="MEFVNYLGQNNVVTFFLLLVRTGALMVFFPFFNHMQIPVIIKAV
                     LSFMFAIFLFPLAHAPVGLENLSVEYLILETFSELMFGMCAGVLLMLVFGALQLAGGQ
                     ISMIMGFSMASVIDPQSGVNMPLISNMLNFIVLLAFLLFDGHHIVLQFIAYSLQFIPL
                     GGFYPDENIVKYTAKGVINLFLFGFIISFPILALSLLADLIFGMLMKTMPQFNLLVVG
                     FPIKIAIAFVVIMAIISAMVKLFTSLMMQVLNDLPGLFF"
     gene            9412..11085
                     /locus_tag="RPW04_000772"
     CDS             9412..11085
                     /locus_tag="RPW04_000772"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294877.1"
                     /translation="MKVVLLNDNPAVSRLVNVSLAKLGYEFIEVADTDSINGVDYDLL
                     ICDSALFDENSNYSLYAKDILYLVPRNYENISGKNVLEKPFLPTDFIDVVENILKKPL
                     PYMGDKTDDSNLNNHKKDINDEDNVKLGNEFGELRDIDDIDFSKHLNDELLDANNLDS
                     ELLDNLDHTDDHKNLDEQPIDEEINTNEFVDDLAFQTNEQDADNEQKNSAQDDEIMPS
                     SEDYEVEDSIKKITQDELKDAIKETGDTQNIDNISSFDDDLNFKNDVIDEMNNESNLE
                     DDVSENANLDNDEKEEFTEIKSDELDELSSMIEEIDNMPIDDIDKAENEDEYMNLDEQ
                     PSDITSIDEALKEIDNVDVADNLDEMQNITEIENQSENSDGDLEEFTDDIIETENSDK
                     NMDAIQNSVETDKVDENSINSLDEITSHSDEVNVLENEISVNESDNDELEDINENTIV
                     DEASLQNDAVHDEDLSQESVSINSHEATNIDEISEKDIKTALNEEISRSSDDVKEAPV
                     SKIIDDSELKSELAKKISEQITESLNSSTIKDALKDMNIKINISFEEKA"
     gene            11082..11693
                     /gene="gmk"
                     /locus_tag="RPW04_000773"
     CDS             11082..11693
                     /gene="gmk"
                     /locus_tag="RPW04_000773"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012140266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDX6294878.1"
                     /translation="MSGQILIISGPSGSGKSTLLSKLMRDFDNIYFSISSTTRSIRDG
                     EKDGVNYHYISEDEFKTGIETAKFLEWAYVHKNYYGTSLEPVEKALKDGKIVIFDIDV
                     QGFHLAMKKYREIITSVFVTTKDRNELKRRLEIRDADLKDAIENRLFNAATEMGHINE
                     YDYLIINDDLDRSYSSLKSIFETMSVKTKNYDINAVIDSWNVC"
     gene            11737..11952
                     /gene="tatA"
                     /locus_tag="RPW04_000774"
     CDS             11737..11952
                     /gene="tatA"
                     /locus_tag="RPW04_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HDX6294879.1"
                     /translation="MGSFSMGHWLIVLAIIVLLFGAKKIPELAKGVGKGIKTFKKEME
                     DETPVEKIEKADSETQSTKQNETTKNV"
     gene            11952..13547
                     /locus_tag="RPW04_000775"
     CDS             11952..13547
                     /locus_tag="RPW04_000775"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDX6294880.1"
                     /translation="MKNSVKSEIYRVLGRDFILEKPKDKNLAHYATPFAFSLAKEFKK
                     SPAIIASQLALKFENHELFDVFSINGYLNFKLKGEFLNSLANNALSLAESFGSKKPQS
                     QKDIFIEYISANPTGPLHIGHVRGAVYGDTLARVARYIGLDVFTEYYINDAGNQIDLL
                     GISISLFAREALFNENVQYPDKYYRGEYIEDIAKLALGKFGKDIFYDESRNLELAEFG
                     KDEVLKIIKKDLQDVGIFIESWASEKSLYDELEGTIKKLASSGQMYEKDQTTYIASTM
                     LGDDSDRVVIRSDGRPTYLAGDIVYHDAKFKKGYKHYINIWGADHHGYIARIKAAINF
                     LGYDESRLEVILMQMVSLLKEGKPFKMSKRAGTSVLMSDILSEIGSDALRFIFISKAN
                     TSSLEFDIDELKKEDSSNPIFYINYAHARVNQVFAKASKLPNDVVGADLSNLDESGKN
                     LLFEALILPEVLEDAVTSRSLHKIPEYLKSLSASFHKFYNENRVVGSKNEDELLKLFS
                     VVALSIKVALNLIGIKAKDKMEH"
     gene            complement(13519..14400)
                     /locus_tag="RPW04_000776"
     CDS             complement(13519..14400)
                     /locus_tag="RPW04_000776"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012354.1,HMM:NF015431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDX6294881.1"
                     /translation="MTIKQIEHFLKLYELNNVSLAAKEFDISQSALSNSLKELENSLN
                     GNLFDRIGKNLIINQKGKAFYEQILPVYLNLKNIEIKMRYNGLLNLNLLSSQNIGNYL
                     LPTVLNDLLGKFNMTLSIKNTAKIVDNILNHKCDLGFIESNIHNKNISKLKICEDELI
                     VVCADKNYQNKECYIDEISDKKWILREDGSGTRQTFLTKIPNGVNINIALELNSTESI
                     KKCLEKSEFFSVLPRFCIPKTLYQIKIKNIKFTRDLSIIFHTKKQEDSEFIGIATALQ
                     SKLAAIYKLNVPSYLLL"
     gene            14500..15528
                     /locus_tag="RPW04_000777"
     CDS             14500..15528
                     /locus_tag="RPW04_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family putative sulfate export transporter"
                     /protein_id="HDX6294882.1"
                     /translation="MTHHKKIYQKRRIQAWIFICLLSSFAYILASTSFFTKFGISALI
                     IAVVLGTFFGNMAHSLVTLVRKSGVLSICTKQILRLGVILYGFRITLNDALSIGIGGI
                     VSAAIVVFSTFLIGYFVGIKLGLDKKSAVLISSGSSICGAAAVLATESIAKGGANRVG
                     VAVCTVVVFGSLGMFLYPLIYGFGFSGLSEVQAGFMSGVSLHEVAHAVAAGNAIGSLA
                     SDNAVIVKMLRVLMLVPFLIFLSIFSAFFIGDKRKSSLKSSFPYFAVWFLVALVVGSL
                     PFFPREFASVYINTADTFMLCAAMGALGLTITKNALKNSGKLPFILASVLFIWLIFIG
                     YILSKFFG"
     gene            complement(15551..15868)
                     /gene="rsfS"
                     /locus_tag="RPW04_000778"
     CDS             complement(15551..15868)
                     /gene="rsfS"
                     /locus_tag="RPW04_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDX6294883.1"
                     /translation="MQDRIEKITRLLDEKKAENIEIIDMQNKDYLAKFVIIATTLTGR
                     HAYALLDDLKTELKPIGEEFLGVESSDDWTVIDLGDIMIHLMSETYRTKYNIEEFLKE
                     LKK"
     gene            complement(15858..16403)
                     /gene="nadD"
                     /locus_tag="RPW04_000779"
     CDS             complement(15858..16403)
                     /gene="nadD"
                     /locus_tag="RPW04_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010399947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HDX6294884.1"
                     /translation="MNIAIFGGSFDPPHNAHDAIVKAALLNLKIDKLIIIPTYLNPFK
                     TEFGADPKKRLVWCEALWQNLDKVEISKFEIEQNRAVPSLESVLHFKKIYNPDIVYLI
                     IGADQLINLEKWYKFKVLKKLVNFVVASRDDIEIPSNLQKLNINVKISSTKVRNELDF
                     CQVPKAVLEDVIKFYKEKNAR"
     gene            16463..17455
                     /gene="gap"
                     /locus_tag="RPW04_000780"
     CDS             16463..17455
                     /gene="gap"
                     /locus_tag="RPW04_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDX6294885.1"
                     /translation="MALKIAINGFGRIGRCAARIILNSSEYELAIINDTAERNMTRYL
                     LKYDTVHGEFDKEVNVINDDYIEVEGKKIRVYSTRDIGELDLNGIDVVLECTGKFLTT
                     EKCEAYLKQGAKKVVMSAPAKDDTPTFVLGVNSNTYKGEKIISNASCTTNCLGPVTRV
                     LEDLYGIQKGLMTTIHAYTNGQSLVDVKCRDFRRSRAAAQNIIPTSTGAAKAMKLVMP
                     SLNGKLHGQSVRVPVPNVSMVDLTAVLGKSVSKEELNEAFINASKTSLKGIMAVDFDE
                     RVSSDFNSSSYSSIVAADLTQVICGDMIKIMAWYDNEWGYTSRLIEMAKFISER"
     gene            17457..18662
                     /locus_tag="RPW04_000781"
     CDS             17457..18662
                     /locus_tag="RPW04_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDX6294886.1"
                     /translation="MSEIISIKDINFKSGSKVFVRCDFNTPMDEFYNITDDRRIRSAI
                     PTIRYILDQGCSVILASHLGRPKNGYEEKFSLLPVAKRLSRLIDREIIFANDVVGNDA
                     KTKVAALKQGEVLLLENIRFEKGETKDDVALAKELSEYANYYVNDAFGVCHRAHSSVH
                     AITKFYDEEHRAAGFLLIKEIEFARNLIKRPIRPFVAVVGGSKVSGKLQALTNLLPRV
                     DKLIIGGGMAFTFLKAIGENIGNSLLEEDLIEEATNILKKGRELGVKIYLPVDVVVAQ
                     TFSAESAIKYVSTQEIPTGWMGLDIGPASVRLFREVLSDAQTIWWNGPMGVFEMDKFS
                     KGSIKMSHAIAESFATTVVGGGDTADVVERAGDADEMTFISTGGGASLELIEGKELPG
                     VKVLLKAES"
     gene            18777..19445
                     /locus_tag="RPW04_000782"
     CDS             18777..19445
                     /locus_tag="RPW04_000782"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDX6294887.1"
                     /translation="MIYAANLKCNHTRGGFLEYAKELDNNMSGENVIVFPPSSAFLEA
                     KFKFVQGAQNFYPCDNGSFTGEIGAAMFDEFGITTVLIGHSERRTLGEDEPFLKAKFD
                     FAKQKGWDVIYCIGEDDITHMNGSTKEFLTEQLENIDLEYENLVIAYEPIWAIGTGKS
                     ANSVVITDILDFISTKTTAPLLYGGSVNEKNICDIKAIKNCNGVLVGTASWDVKNFIN
                     LIKA"
     gene            19463..20287
                     /gene="fabI"
                     /locus_tag="RPW04_000783"
     CDS             19463..20287
                     /gene="fabI"
                     /locus_tag="RPW04_000783"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HDX6294888.1"
                     /translation="MVMNGKKGLIVGVANKMSIAYGIAKQCKEQGASLAFTFVSDAIK
                     KRVEPIAAELGSSLVYELDVNNKEHLDSLASKIKADFEGIDFIVHAVAYAPKEALEGE
                     FIDTTKEAFDVAMGTSVYSLISLTKAVLPVLKEGGSVLTLTYLGGAKFVPHYNVMGVA
                     KAALESSVRYLARDLGKKNIRVNAISAGPIKTLAASGIGDFKMILKWNECNAPLKRNV
                     SIDDVGKSGMYLLSDLASGVTGEIHYVDAGYNIMGMGDAVVGENGSTVLAWDECKE"
     gene            complement(20352..>20561)
                     /locus_tag="RPW04_000784"
     CDS             complement(20352..>20561)
                     /locus_tag="RPW04_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDX6294889.1"
                     /translation="EFFDLVAKNVKRIRQNLGLSQLETALSIGQASSGFYANMENNAH
                     GKHFNLLHLFKLSKLFDCDICDFFK"
BASE COUNT         6820 a         3084 c         3951 g         6706 t
ORIGIN      
        1 attttttgta ttattgtgaa gttttgtctt ttttatcaaa aaatgcggta caagatgttc
       61 ataatctaaa aatagccaat agagtgaatt tgtttaatct aggtcaaaaa agatttttgc
      121 ataccataac tcctataatc taggatatag aaatcatact aatttacttt gttttttgac
      181 aatgatattt tatggcaata tgcaaaatat ctatggcgac cggagttata ccgctgatgt
      241 tcgaagccgc cgcaagtgtc ggcggagcaa atttatttag tttttctacg acttcgttgc
      301 ttagtccact tatgcttttg aactcaagac tcttaggaat tttaatatcc aaaagtcctt
      361 tcattttttc aacttctatt tgttgttgag ctatataatg atagtatttt gcctctgtta
      421 atatctgatt tagcgatttg tcatctaaat ttaagaaaaa ctcgtttaat ttgcgtaatt
      481 tttctattgt aaaagatttt ctagcggcta tcttttgaag tggaactttt tcatttataa
      541 tatcctcatc tatgctagct agaaactcta aattttcctt gtttggactc atatcttttg
      601 ttaataagat ctccattcct ttttctaaat tcgattttaa cttaagcatc tcttcgaaag
      661 cctcttttgg tagcaatcct acgttgtagc catatttgct aagtcttaag tttgcgttat
      721 cttctcttaa aagcaaacga tactcggcgc gactagtaaa cattctataa ggctcttttg
      781 tgccttttgt aactagatca tctataagaa cgccgatata actctcatct cgtcgcaaga
      841 tcagcggctc tctcgttttt aaatttaaag ccgcatttat acctgccata agtccttgag
      901 cggccgcttc ttcgtatccg gtagttccgt ttatctgacc ggctagataa agaccgttta
      961 ttttttttgt ttcaagagta tgtttgagct ctgtcggaga gacataatca tactctatag
     1021 catatccgtg acggactatt ttggcatttt gaaaaccttt tactgagcga agcatttcga
     1081 cttgagcatc atatggtaaa ctagttgaaa aaccatttat atagtattct gtagcttctc
     1141 gtgtttgagg ttcgataaaa agatgatggc gctccctatc tccaaatcta tttattttat
     1201 cttcgatact tggacaatat cttggaccta taccttcaat ctgacctgta aatagcggtg
     1261 ctctatcaaa attcgaacgt attatttcat gagttttctc gttcgtatag gcgatgtagc
     1321 aaggtagttg ggttttatta aattcttttg tacgaaaact aaatggagtt ggatcttgat
     1381 ctccatcttg tctttcaagt acgctaaaat caatactttt tgctaaaact ctaggacaag
     1441 ttccggtttt tagcctgccc atttctaaat ttaaactttt tagagatgcg gaaagagatt
     1501 tgctgcttag ttctccgacg cgtccggctt caagtttatt gaatccaaca tggataagtc
     1561 cgtttaagaa agttcctgtt gttatgatga gtttttttgt gccgtagtta ttatcaaggt
     1621 gggtttttac gccgattatg ttgttatctt ttgttaaaat ctctgttgcg atctcttgag
     1681 taacctctaa atttggagta tttaacaaaa gatttctcat ataaactcta tatctatcca
     1741 tatcgatttg cgctctgctt ccgcgcacgg ccggaccttt gctctcattt aaaagacgaa
     1801 actgaattcc gcaagcatct gtagtaagcc ccatttgacc gccgagcgcg tctatctctt
     1861 ttactaaatg accttttgca agacctccta ttgcagggtt gcagctagca gctccgattt
     1921 gctcggctag tatggttata agcagagttt tagcacccat ttttgcagct gctaaagaag
     1981 cttctatacc agcgtgtccg ccgcctacaa ctattacatc ataattcata atttcaaacc
     2041 ttgttatttg ttggagtcag ggattgtatc aaatttagag taaaaaaagt ataaatttcg
     2101 tataattgct acattaaatt taggataaat tatgtttaat ggattgatca gggagatagc
     2161 tgaggttatt aaatttgatg gaaaaacatt agctcttaaa gcgaactata agccaaattt
     2221 aggagatagc attgccgtaa acggagcttg tttgagtgtg actagcgtga gcgaaaccgg
     2281 atttagcgta gagcttagta gcgaaagtaa agagcatttg gcactgcaaa actatagagg
     2341 aaaagtacat atagagcctg ctatgaaact atctcatagg gttgatggac atcttatgca
     2401 aggtcacatt gatgccgttg gagagataat aaaaattgaa acattgcaaa gcggaacgaa
     2461 tttctacata aaacttccct caaacgttat gcatcttgtt tcaaacaaag gcagtatagc
     2521 agttgatggc gtgagtctta cgataaatga agtttttaaa gatagtataa ggcttacgat
     2581 tattccatta agcttgaaag atagtctttt tggcgagttt aaagtcggtc gtaaagtaaa
     2641 tgtagaaacc gatcttttgg ctcgttatgc agatagaatt ttatctatga aagataaaaa
     2701 aaacagtggc gatttatcgt ggcaagaggc ggatttttat gctagtttgt attgatggta
     2761 atgatgtttt agccggattt agcaccaaag atggtggtgt ttcaagcggc atttatgaaa
     2821 gtttgaattt ggctactcat gtaggcgatg atataaaaaa cgtgtttgaa aacagagaaa
     2881 ttttaaaaca aaaaatcggt gcgaaaaagc ttatttttat ggatcaaatt cactctgata
     2941 tagtttgtga gatatctagc attgatgatg aaatttctcc ttgtgatgct attattacta
     3001 agctgaaaaa tgtggcatta tgcactatta cggctgattg ttcgcctgtt cttgtttatg
     3061 ataaattcac aaaaaagata gctgctatcc acgcaggtag agccggagta gtctcacaca
     3121 tagtttcaaa aactatcaaa aaaatgggtt cggaatcact aaatttaaaa gtgataatcg
     3181 gtgcaaatat aagcggaaat tgttacgata taggggattt ggatttggga gagtttaaca
     3241 aatttaaaaa taaaactaaa tttgatatga atgcagcatt aaaatacgaa cttgatagtt
     3301 tgggcgtgag agattatgag tttagcggga tttgcaccca ttgcgacgag agattttttt
     3361 catatagaaa agacggcgta accggtagat tttgtggatt tataatgctt aaggatggat
     3421 tatcatgata agtgcgtaca aagagtttaa acaagaagat ctagagttat acaatatatc
     3481 tttaaacgcg aaaaaattca gtgtggattt tacctcaaat atgcggattt tagagatttt
     3541 atttgctcca agagagatta ttatagatga gtcaaattta gaaaaaatag ctgaaatttt
     3601 tactgcttta gaagagataa gagataattc tcagctaagc aagtagctct aaatttaaac
     3661 taatttttat gaaataataa gcttgattta gataaaatac gaacttcatt tcacatgtgc
     3721 taatcctttt ttagttgtgg taaaaacgcc actaaggagc acagaggaag aaactaaata
     3781 ttttttaagg agaaactcat ggttactatg agagatttat tagagtgtgg tgtgcatttt
     3841 ggccaccaaa caagacgctg gaatccaaag atgaaaaagt tcatttttgg tgagagaaaa
     3901 ggtatttata taattgacct tcaaaagact ataagatact ttagatatac atataacatt
     3961 gttagagacg ctgcagctga gggtaaaacc gtattattcg taggaactaa gaagcaagcg
     4021 ggcgttgcta taaaagaata cgccgaaaaa tgcggaatgc catatgtaaa tcacagatgg
     4081 cttggcggta tgatgacaaa ttttggaaca attaaacaat caataagaaa attagaagtt
     4141 atagaagcca tggaagaaga cggctctata aatttactta ctaaaaaaga agctttgatg
     4201 ctaagacgca aaaaagagaa gcttttagca actttaggcg gtattagaaa tatgaaaagc
     4261 ctgcctgata tggtttttgt tatagatacc gtaaaagaga aaattgcagt tgctgaagca
     4321 aataaattaa gaatgccggt cgttgctcct atagatacta actgcgatcc tgatatagtt
     4381 gattttccaa ttccgggaaa tgatgatgct ataagaagcg ttcagctatt ttgtcaagag
     4441 atggctgagg ctataaacga aggaaaagct ttgagagacc aagacgaagc agagcaagta
     4501 gagccagtaa gtcaagagga aaaagacgaa gtagtagctg aggctatgag cgaagctgac
     4561 tttgaggagc aataatggaa ataagtgcaa gtatggtaaa agagcttcgt gaaagtaccg
     4621 gagccggtat gatggactgc aaaaaagcgc ttcaagaatc aaacggagat atgcaaaaag
     4681 cagttgatat attaagagaa aaaggtcttg gcaaagcggc taaaaaagct gatcgtttag
     4741 cgagcgaagg acttgtcagc gtagtcgtaa gtgagaataa taaaactgca actataactg
     4801 agatcaactc agaaacggat ttcgtagcta aaaatgcgac ttttgttgat ttagttaaaa
     4861 acactaccat tcatgttcaa acaaactcta taaatacggt tgaagagcta aaagagagtt
     4921 ctattaatgg tgttaaattt gaagagtatt ttcaaagcca aatcgcaact atcggcgaga
     4981 atttggttgt aagaagattt gaaactataa aagcagcaaa aggtggcatc gtagctggat
     5041 atatccattc aaatagtcgt gttggtgttt taataggcgc agcttgcgac agcgaagaaa
     5101 cagcagcgaa aattcatgat tttttaagaa atctttgtat gcacgcagct gctatgaaac
     5161 ctcaagttat aagctacaag gagtttgatg ccgattttgt agaaaaagag tatctagcac
     5221 ttaaaggcga gcttgaaaaa gagaatgaag agttggttcg tcttaaaaaa ccgcttcaca
     5281 aaattcctga gtttgccagt cgcgctcaat taacagatga tatcatagca aaagcaactg
     5341 agaatttaaa agcggagctt aaaaaacaag gcaaacctga ggctatctgg gataaaattt
     5401 tacccggaca aatcgataga tatatagcag ataatactca acttgatcaa cgccttactc
     5461 ttttaggaca gttttacgta atggatgata aaaaaacagt agagcaagcc attgcggatg
     5521 aggctaaaaa agtaggcgga aaagtagaaa tcgtaagcta tgttcgcttt gaagtaggtg
     5581 aaggtttaga gaaaaaaagt gaagattttg cagctgaagt agcagctcaa atggcttaat
     5641 aatgctaaaa gcggtaaatt tatctcataa atttgattat ccgcttttta atgatttaaa
     5701 tttagaaatt tttccttcta ccacgacagc cataaccggc gtgagcggta gcgggaaatc
     5761 tactatcttg cacattcttt ccacactttt aaagcctgtt ggcggtgaag ttatatataa
     5821 tgaaaaatcg atttataata taaatgaaag tgaactttta aaaattagaa ggcttgattt
     5881 tgggataatt tttcaagcac attatctttt taaaggtttt aacgcttatg aaaatatcga
     5941 acttgcaaat atcttaagtg gacataaaat cgacaccgag cttttagaaa aattaaaaat
     6001 agaccacgtg ataaaccaaa aaatcggcga acttagcggc ggacagcagc aacgagttag
     6061 catagcaaga gttatgagca aaaaaccgcg tatcatattt gcagacgagc caactggaaa
     6121 tttggataaa aatacggcaa acgaagttat gaatgttata tttgattatg ttaaaaatga
     6181 aaatgcggct ttggtgttag taactcatga tgaaagcctt gcaagcagat gtgatgatat
     6241 ttttttgctg caagacttta aattaaatag ggtttgttca tattgaaata cttatcaaat
     6301 atcatatata tcggtaaaat aactaaaatt tataagatat atttgccata aaatttctag
     6361 gtgtaccggg cattgccgaa cttctccagt attttttatc aaataaattc tgcacggcga
     6421 agcttaaatt tagattttta tagttatagc cgactagagc atcatatcta gtaaaaccat
     6481 ctaaatttat ctcttttcca tcgctgctat aataaaattt tttagacgaa tgtactgcgc
     6541 caatctccgc atatagatct ttgataggta tgtatcttat aaatacattt gtattaaaat
     6601 tccctgttcc acttaggtga cgaccttcgt ttaaaggatt ttgtttatct ttttttactc
     6661 tagctttcat aaaaccaacc gagcttctta tataaacatt gtctgatatt ttaccgatcg
     6721 cactaaattc cacgccttta gactgttctt tacctctaat tgcgtatgtg aacggatcat
     6781 ttatcggatc tggtctatat cttatgttgt aatgctctag cacataagtt gatagagttg
     6841 tacttataga gttatttaac cagtcgcttt ttatacctac ttcatattgc tgtgagtttt
     6901 caggttttgt attaaatcct tttggatcag ttgtggtaga tataccaaca taaccattgc
     6961 ctccatatgg agaaaaactt ttattatacg cggcgtaagc tgtgtgctga gaatttatat
     7021 cataaactaa tccataatta tagctgaaat tgtctccttt atactcattg cttttattct
     7081 tgatatcttt tgaactaaat ttatactcgt ctagcctacc tcctaaagca aattttaaac
     7141 tatctgtgat ataaaataac tcttgcacaa atactccgtg attcgtggct ttatgcttgt
     7201 tgctaatgct tgctgctgga gtatttatcc tgccccaact tattcgcgga ctaaatggat
     7261 ctatattttg atttcttttt ataccaatta gcggctctct tttttctatt tggaaatcat
     7321 agcctaaaag tagtttattt ctttttccaa atgtgtcaaa gtcgaaattt gcgctaattg
     7381 aatttaaaaa cgtgctatta tctgtatttt gccaagcata actttgagat aaaagtttag
     7441 tttttgggtc gtatttacca ccaaaatagt gatcaaagct ttgattagct tttctgtaag
     7501 ccaaaaccca ttcaatatac attttgtcgc taaaatcata attcagtttt gatctataca
     7561 tttgcagtct atcttctaca atgtcccctt gcctagcaaa agtttttttg tagtctatac
     7621 ccatttgttc atacacgtct ttggtcggtc ctctatctgg aactcttttt gcgtaatcat
     7681 aagtatattc caaaaggtgg ctaaaattat ctttataata gataatacta ggcgatatca
     7741 ttttactttt ttcttctata taatctctat aagagttgct atctcttaga tctccaacca
     7801 ctctggctgc aaaattttca ttgaatacat gattcatgtc tagtccaaag tatctattat
     7861 cgtatgatcc ataacctacg gtggccaagc ttttagagtt aaaatttgcc actttgctta
     7921 ccatatttat gactccaccg cccgcacctc ttccatataa tacggaattg ggtcctttta
     7981 atatctctat cctctcgata tttgccgtac ttcttctaac ttgtccgcta tctctaacac
     8041 cgtctctata gatatctccg gcatctgcgt tgaagcctct gacaaaaatg ttgtctgctc
     8101 tcatatcata agtcgtgtct atccctgcag tcccttcaag gatcgagcta aggtcgtttt
     8161 gtccataact tttatttcta ctgatatcta atatatctat agtttgaggc gtctctttta
     8221 ataacaagtc tgttctgctt ccttgagctc tatcgtagcc tacgtaacct tttagagtat
     8281 cgacgtctga cttactttct atcttagtgg gtggcaatgt tgcattgtat tcatcatttg
     8341 caaatataac caccaccgct acaatactaa aaaatacgaa ttttttcatt atttatatcc
     8401 tgattatgaa tttcaaaata taatattgta tcagaaagta tataaaatta ttattaaaat
     8461 aatttatatt attaaactat attaactgca caagaatgta attatcttta aaaataatat
     8521 taaatttaga ccaatttaag taaaatatca atcataaaat caaaaagttt ggatatggaa
     8581 tttgtaaatt atctaggtca aaataacgta gttacatttt ttttgcttct tgtaagaaca
     8641 ggtgcgctta tggttttttt cccgtttttt aaccatatgc aaattcctgt cattataaaa
     8701 gcggttcttt cgtttatgtt tgctatattt ttatttcctc ttgctcatgc gccggtcggt
     8761 cttgaaaatt tgagtgtaga atatctgatt ttagaaacat tttcggagtt gatgtttggt
     8821 atgtgtgccg gagtgctttt aatgcttgta tttggtgctt tacagctagc tggaggacaa
     8881 atttctatga ttatgggatt ttctatggca agcgtgatcg atccgcaaag cggagttaat
     8941 atgcctctca tctcaaatat gctaaatttt atcgtattat tagcattttt actttttgat
     9001 ggtcaccata tagtgctaca atttatagct tattcactac aatttatccc tttaggcggc
     9061 ttttatcccg acgaaaatat agtgaaatac actgcaaaag gcgtgataaa tttattttta
     9121 tttggattta tcatatcgtt tcctatatta gctttatcat tgttagccga tcttattttt
     9181 ggaatgctta tgaaaactat gcctcagttc aatcttcttg tagtcggttt tcctatcaaa
     9241 atcgcaattg cttttgtagt tattatggct attatttcag ctatggttaa gttatttaca
     9301 tcgcttatga tgcaagtttt aaatgatttg cctggtttat ttttttaaat aaagctatta
     9361 ataatgaaaa atagcgtaaa atattgaaaa aagattccat aaggagctat aatgaaagtt
     9421 gttttactta atgataatcc agcagtgtcg cgcctagtaa atgtaagcct tgcaaaactc
     9481 ggttatgagt ttatagaggt tgcagatacc gatagtatta atggcgtgga ttatgatcta
     9541 cttatttgcg atagcgctct ttttgatgaa aatagtaact actctttata tgcaaaagat
     9601 attttatatc tagtccctag aaattatgaa aatatatcag gaaaaaatgt acttgagaaa
     9661 ccgtttttgc caactgactt tattgatgtt gtagaaaata tattaaaaaa acctctgcct
     9721 tatatgggcg ataaaacaga tgattcaaat ttaaataatc ataaaaaaga tataaatgat
     9781 gaagataatg taaaacttgg aaatgaattt ggagagctaa gagatataga tgatatagat
     9841 tttagtaaac atttaaatga tgaattgctt gatgcaaata atttagatag tgaattactt
     9901 gataatcttg atcatacaga tgatcataaa aatttagacg aacagccaat agacgaagaa
     9961 attaatacta atgaatttgt cgatgattta gcttttcaaa ccaatgaaca agacgcagat
    10021 aacgaacaaa aaaatagcgc acaagacgat gaaatcatgc catctagcga agattacgaa
    10081 gtagaagata gcattaaaaa gatcactcaa gatgaattaa aagatgctat aaaagagacc
    10141 ggagatacgc aaaatataga taatatatct agctttgatg atgatttgaa ttttaaaaat
    10201 gacgttatag acgagatgaa taatgaatca aatttagaag atgacgttag tgagaatgcg
    10261 aatttagata atgatgaaaa agaagaattt actgagataa aaagcgatga gctcgatgag
    10321 cttagtagta tgatagaaga gatcgataat atgcctatag atgatataga taaagcggaa
    10381 aatgaagatg aatatatgaa tttagatgag caaccaagtg acataacaag catagacgaa
    10441 gctctaaaag agatcgataa tgtagacgta gccgataact tagacgaaat gcaaaacatt
    10501 actgaaatag aaaatcaaag tgaaaattca gatggcgatt tagaggaatt tacagacgat
    10561 attattgaga ctgaaaattc agataaaaat atggacgcaa tacaaaacag cgttgaaacc
    10621 gataaagtag atgaaaattc aattaatagt ttagatgaaa ttacaagtca tagtgatgaa
    10681 gtgaatgttt tggaaaatga aatatcggtt aacgagtctg ataatgatga acttgaagat
    10741 ataaatgaga atactatagt agatgaagca tctttacaaa atgacgctgt gcatgatgaa
    10801 gatttaagcc aagaatcagt tagcattaac agtcatgaag ctacaaatat agatgagata
    10861 agcgaaaaag atatcaaaac ggcattaaat gaagaaataa gccgaagttc agatgatgtt
    10921 aaagaagcgc cggtatctaa aattattgat gatagtgagc taaaaagtga attagctaag
    10981 aaaatcagtg aacagataac ggagtcttta aactcaagta ctataaaaga tgcattaaaa
    11041 gatatgaata taaagataaa tataagtttt gaggaaaagg cgtgagcgga caaattttga
    11101 taataagcgg acctagtgga agtggcaaaa gtacgctgct aagtaagctt atgcgagatt
    11161 ttgataatat atatttctcg atctcaagca ccacaagatc tataagagat ggcgaaaaag
    11221 atggagtgaa ttatcattat ataagtgaag atgagtttaa aaccggtata gaaacagcta
    11281 aatttttaga atgggcttat gtgcataaaa attactatgg aactagcctt gaaccggttg
    11341 aaaaagcttt aaaagatgga aaaatagtaa tttttgatat cgatgttcaa ggatttcatt
    11401 tggctatgaa aaagtatcgc gagatcataa catcggtttt tgtaactaca aaagatagaa
    11461 atgagctaaa aagacgtctt gagatcagag atgctgattt aaaagatgct atagaaaata
    11521 gactatttaa tgctgcaacc gagatgggac acataaacga gtatgattat ctgattatca
    11581 atgatgatct tgataggtca tattctagtt taaaatctat ctttgaaact atgagcgtaa
    11641 aaacaaaaaa ttatgatata aacgccgtga tagacagctg gaacgtttgc taaatttata
    11701 aatttgtgtt aaaatattta aaattaagga gataatatgg gtagttttag tatgggacat
    11761 tggctgatag ttcttgccat tatagtgtta ttatttggcg ctaaaaagat accagagctt
    11821 gcaaaaggcg ttggaaaagg tattaaaaca tttaaaaaag agatggagga tgaaactccg
    11881 gtagaaaaaa tagagaaagc agatagcgaa acccaaagta caaaacaaaa cgaaacaaca
    11941 aagaacgttt gatgaaaaac agtgttaaga gcgaaattta tagagttttg gggcgtgatt
    12001 ttatccttga gaagccaaag gataaaaatc ttgctcatta cgcaactcct ttcgcatttt
    12061 ctcttgctaa agagttcaaa aaatcacccg caattatagc ttcccagctt gcacttaaat
    12121 ttgaaaatca tgaacttttt gacgttttta gtataaacgg atatttaaat tttaaattaa
    12181 aaggtgagtt tttaaattct cttgcaaata acgctttgag tcttgcagag agttttggaa
    12241 gcaaaaaacc ccagagtcaa aaagatattt ttatcgaata tatcagcgca aatccgaccg
    12301 gacctcttca tatcggacac gtaagaggag cagtgtacgg cgatacgtta gctagagtag
    12361 caaggtacat tggacttgat gtttttactg agtactatat aaatgacgca ggaaatcaga
    12421 tagatttgct tgggatttct ataagtcttt ttgcgcgcga agccttgttc aatgaaaatg
    12481 tacagtatcc agataaatac tacagaggtg aatatatcga agatattgct aagcttgctc
    12541 ttggtaaatt tggaaaagat atcttttatg acgagagtag aaatctcgaa cttgcggaat
    12601 tcggtaaaga tgaagttttg aagattatca aaaaagatct gcaagacgtt ggcattttta
    12661 tagagagttg ggctagtgaa aaatcacttt atgatgagct tgaaggaacg ataaaaaagc
    12721 ttgcctcaag cggacagatg tatgaaaaag accaaactac ttatatagct tcaactatgc
    12781 ttggagatga tagcgataga gttgttataa gaagtgacgg cagacctact tatttagctg
    12841 gagatatagt ttatcatgat gctaaattta aaaaaggata taaacattat attaatattt
    12901 ggggtgctga tcaccacgga tacatagctc gcattaaagc agctataaat tttcttggat
    12961 atgacgagag tagacttgaa gtaattttaa tgcagatggt gagtttgtta aaagaaggca
    13021 aaccgtttaa gatgagcaaa cgagctggaa ctagtgtact tatgagcgat atattaagcg
    13081 agataggaag cgacgctctt agattcatat ttatctcaaa agcaaataca agtagccttg
    13141 agtttgatat agacgaactc aaaaaagaag atagctcaaa tcctatattt tacataaatt
    13201 acgctcatgc aagagtaaat caagtattcg caaaagcaag taagcttcca aatgacgtgg
    13261 taggtgccga tctctcaaat ttagatgaga gtggtaaaaa tttacttttt gaagcactta
    13321 ttttgcctga agtactagaa gacgccgtta cttcaagatc gcttcataaa atacctgaat
    13381 acctaaaatc tttaagtgct agttttcata agttttataa tgaaaacaga gtagtaggaa
    13441 gtaaaaacga agatgaactt ttaaagctat ttagcgtggt cgctcttagc atcaaagtag
    13501 ctttaaattt gatcggtatt aaagcaaaag ataagatgga acattgagtt tatatatagc
    13561 agctagctta ctttgaagag cggttgctat gcctataaac tcagaatctt cttgtttttt
    13621 tgtgtgaaaa ataatgctta aatctcttgt gaatttgata tttttgattt ttatctgata
    13681 tagcgttttt gggatgcaaa atctcggcaa aacgctaaaa aactcacttt tttctaaaca
    13741 ttttttgata gattcagtgg agttaagctc taaggctata tttatattga ctccgtttgg
    13801 aatttttgtt aaaaatgtct gtctagtgcc cgacccgtct tctcttaaaa tccatttttt
    13861 atctgatatt tcatctatat agcactcttt attttgatag tttttatctg cgcaaactac
    13921 tattaattca tcttcgcaaa tctttaattt agatatattt ttattgtgaa tattgctctc
    13981 tataaaacca agatcgcatt tgtgatttag tatattatct actattttag ccgtattttt
    14041 tatgctaaga gtcatattaa atttgcctaa aagatcattc aaaacagttg gcaaaagata
    14101 gtttccgata ttttgactag ataataggtt taaatttaaa agtccgttat aacgcatttt
    14161 gatttctata ttttttaaat ttaaatatac gggtaaaatt tgttcataaa aagcctttcc
    14221 tttttgattt attataagat tttttcctat tctatcaaat aaatttccat ttaacgagtt
    14281 ttcaagctct tttaacgagt ttgaaagagc agattgagat atatcaaatt cctttgcggc
    14341 aagactaaca ttatttagct cataaagctt cagaaaatgc tctatttgtt ttatagtcat
    14401 aagatatcct tatataagaa atatatcatt ataacataaa aaatatattt tttatatcaa
    14461 aaggtattta ggtataattg cgataaaaaa ggaagatata tgacacatca taaaaaaatt
    14521 tatcaaaaaa gacgtattca agcgtggata tttatctgtt tgcttagtag ttttgcttat
    14581 attttagcta gtacaagttt ttttactaaa tttggtatat ctgcgcttat tatagctgta
    14641 gttttgggta cattttttgg gaatatggct cattcacttg ttactcttgt gagaaaaagc
    14701 ggagttttgt ctatttgtac aaagcagatt ttgcgtctcg gggttatttt gtatggattt
    14761 agaataactc ttaatgatgc acttagcatc ggtatcggag gaatcgtttc ggctgcgatt
    14821 gtggttttta gtacattttt gataggttat tttgtcggca taaagctcgg attagataaa
    14881 aaatcagcag ttctcattag ctctggatca agtatatgcg gagcagcagc tgttttagct
    14941 accgaaagta tagcaaaagg cggtgcaaac cgtgttggag tagctgtttg cactgttgtt
    15001 gtatttggta gtttgggaat gtttttatat cctttaattt atggttttgg ttttagcgga
    15061 cttagcgaag tgcaagccgg atttatgagc ggagttagct tgcatgaagt agcacacgca
    15121 gtagcagctg gaaatgctat aggaagtttg gcatctgata acgctgttat agtgaagatg
    15181 ttaagggttt tgatgttggt tccttttctt atatttttgt ctatttttag tgcatttttc
    15241 ataggagata aaagaaaaag tagtttaaaa agctctttcc catattttgc agtctggttt
    15301 ttagtagctt tagtagtcgg ttcgcttccg ttttttccta gagagtttgc ctctgtttat
    15361 ataaatacag ccgatacatt tatgttgtgt gctgctatgg gtgctcttgg tcttactatc
    15421 acgaaaaatg cgcttaaaaa tagtggcaaa cttccgttta ttcttgcttc cgtattattt
    15481 atttggctta tatttatagg atatatttta tcgaaattct ttggatgatt tgggtatttt
    15541 acccaaattt ctattttttt aactctttta aaaactcttc aatgttgtat ttagttctat
    15601 aagtttcact cataagatgt atcatgatat ctcctagatc tatcacggtc caatcatcgc
    15661 tgctctcaac acctaaaaac tcttctccga taggttttaa ctccgttttt aaatcgtcta
    15721 aaagcgcgta agcatggcgt cccgtaagag ttgtggctat gatgacgaat ttagctagat
    15781 aatctttgtt ttgcatatct ataatttcaa tattttccgc ttttttttca tcaagtaatc
    15841 ttgtaatttt ttctattcta tcttgcattt ttttccttgt aaaatttaat aacatcttca
    15901 agtacggctt taggaacctg gcagaagtca agctcatttc taacttttgt tgatgagatt
    15961 ttaacattta tatttagttt ttgcaaattt gaaggaattt cgatatcgtc tcttgaagct
    16021 actacgaaat tcactagctt ttttagtact ttgaatttat accatttttc taaatttata
    16081 agttgatccg caccgataat gagatagaca atatccggat tataaatttt cttaaaatgc
    16141 aacacactct ctaaactagg cacggctctg ttttgctcta tctcaaattt acttatttca
    16201 actttatcta aattttgcca aagggcttca caccaaacaa ggcgtttttt agggtctgcg
    16261 ccgaattctg ttttgaatgg atttagatat gttggtatga ttattaattt atctattttc
    16321 aaatttaaaa gagcagcttt tactatggcg tcatgagcat tatgcggcgg gtcaaaactt
    16381 ccgccaaaaa ttgcaatatt caattttttt taaccttttt tttagtaaaa ttaagtctaa
    16441 ttatacccaa aaaaggaata aaatggcact taaaattgca atcaatggtt ttggaagaat
    16501 cggtagatgt gctgcaagaa ttattttgaa cagttctgag tatgaacttg ctattataaa
    16561 tgatacggca gagcgaaata tgactagata tctgctaaaa tacgataccg ttcatggtga
    16621 gtttgataaa gaagtaaatg ttataaacga tgattatatc gaagtagaag gcaaaaaaat
    16681 aagagtttat tctactagag atataggaga acttgatcta aacggtatag atgtagtttt
    16741 agaatgtacc ggaaagtttt taaccactga aaaatgcgaa gcttatttaa aacaaggtgc
    16801 taaaaaagta gttatgagtg cacctgcaaa agacgatact cctacttttg ttttgggtgt
    16861 aaattcaaat acttataaag gtgaaaaaat aatatcaaac gctagctgta cgacaaattg
    16921 tttgggtccg gttactagag ttttggaaga tttatacggt atccaaaaag gtcttatgac
    16981 tacaattcat gcttatacga acggtcaaag tttggtagat gtaaagtgcc gtgattttcg
    17041 tcgcagcaga gcagccgcgc aaaatataat ccctactagc acaggcgcgg caaaagctat
    17101 gaaacttgtt atgccgagtt taaatggcaa acttcacgga caaagcgtta gagttcccgt
    17161 accaaatgtt tctatggttg atcttactgc ggttttgggt aaaagcgtta gtaaagaaga
    17221 gcttaacgaa gcttttataa atgctagtaa gacaagctta aagggcatta tggctgttga
    17281 ttttgatgag agagttagca gtgattttaa ctcttcaagc tactcaagta tagttgcagc
    17341 ggatcttact caagtaattt gcggcgatat gataaaaatc atggcgtggt atgacaatga
    17401 gtggggttat acttcaagac ttatagagat ggctaaattt ataagcgaga gatgatatga
    17461 gcgaaataat ttccataaaa gatataaatt ttaaaagcgg tagcaaggtt ttcgtaagat
    17521 gcgattttaa tactcctatg gatgagtttt ataatatcac ggatgataga aggattcgct
    17581 cggctattcc tactatcaga tacattttag atcaaggttg ctcggttata cttgcaagcc
    17641 atctgggtcg tcctaaaaac ggttatgaag agaagttttc tttgcttccc gtagcaaaga
    17701 gacttagcag acttattgat cgcgagataa tatttgctaa tgatgttgtt ggaaacgatg
    17761 caaaaacaaa agtagcagct ttaaagcaag gtgaagtact tttactagaa aatattcgtt
    17821 ttgaaaaagg tgaaacaaaa gacgacgtag ctttagcaaa agagcttagt gagtatgcaa
    17881 attactatgt aaatgacgca tttggagttt gtcatagagc gcactcttca gtgcatgcta
    17941 taactaaatt ttatgatgaa gagcatagag cggctggatt tttactgatt aaagagatag
    18001 aatttgccag aaatttgata aaaagaccta ttagaccttt tgtagctgtt gttggaggaa
    18061 gtaaggtcag tggcaagctt caagcactta caaatttact tcctagagtc gataaactca
    18121 tcataggagg tggtatggca tttacttttt taaaagcaat cggtgaaaat atcggaaatt
    18181 cgctccttga agaagatctt atagaagaag ctacaaatat ccttaaaaaa ggacgcgagc
    18241 taggcgttaa aatttactta ccggtagatg tggtcgtagc tcaaacattt agcgccgaat
    18301 cagctataaa atacgtctct actcaagaaa ttccaaccgg ctggatgggg cttgatatag
    18361 gtcctgctag cgttagatta tttcgcgaag ttttgagcga tgctcaaact atatggtgga
    18421 atggacctat gggtgtgttt gagatggata aatttagtaa aggtagcata aaaatgagcc
    18481 acgcgattgc agagagtttt gctactacag tagttggcgg cggcgatact gccgatgttg
    18541 tagagcgcgc cggagacgct gatgagatga cgtttatctc gactggcgga ggagctagtt
    18601 tggagcttat agaaggcaaa gaacttcctg gcgttaaagt gttgctcaaa gctgaatcgt
    18661 gagattttat cgtagcacaa agcagttgca tacacaaata aaggattgtt taataatata
    18721 tgataataat atatctattc ttactaaatt taaaagtaag cattaaaggg ttataaatga
    18781 tatacgcggc aaatttaaaa tgtaatcaca caagaggcgg ttttttggag tatgcaaaag
    18841 agcttgataa taatatgagc ggtgaaaatg tgatagtttt tccgccttca agcgcatttt
    18901 tagaagctaa gtttaaattt gttcaaggcg cgcagaactt ctatccgtgc gataacggct
    18961 catttaccgg agagatcggt gcagcgatgt ttgatgagtt tggtatcact actgttttaa
    19021 taggacatag tgagagaaga actttgggcg aagacgagcc gtttttaaag gctaaatttg
    19081 attttgcgaa gcaaaaagga tgggatgtta tctactgcat aggcgaagat gatataactc
    19141 atatgaacgg gagtacaaaa gagtttttaa cagagcagct tgaaaatatc gacttagaat
    19201 acgaaaattt agttatagct tatgagccta tttgggctat cggcactgga aaaagtgcta
    19261 attctgttgt tataacagat attttggatt ttatatctac aaaaacaact gcgccgctgc
    19321 tttatggtgg aagcgtaaat gagaaaaaca tatgcgatat aaaagctata aaaaactgta
    19381 acggagtttt ggtaggaact gcaagctggg acgtaaaaaa ctttataaat ttgataaaag
    19441 cttaaataaa aaggaaaaaa cagtggtaat gaacggcaaa aaaggactta tagtcggtgt
    19501 agcaaataaa atgagcatag cttacggtat agcaaaacag tgtaaagagc aaggtgcgtc
    19561 tctagctttt actttcgtaa gcgatgctat caaaaagcgc gtggaaccaa tagcagctga
    19621 gcttggaagt tcacttgtat atgagcttga tgtaaacaat aaagagcatt tagactcatt
    19681 agcaagtaag ataaaagctg attttgaggg tatcgatttt atcgttcatg ctgttgctta
    19741 cgctcctaaa gaagccttag aaggcgagtt tatagatact acgaaagaag cctttgacgt
    19801 ggctatgggt actagtgtgt attcgcttat aagccttact aaggctgtcc tgcctgtgct
    19861 aaaagaaggc ggttccgtgc ttactttgac ttatcttggc ggggctaaat ttgtaccgca
    19921 ttacaatgta atgggagttg caaaagcggc tcttgagagt agcgtaagat accttgcgcg
    19981 tgacctcgga aagaaaaata tcagagtaaa tgctatatca gcaggtccta taaaaacatt
    20041 agctgctagt ggaataggcg attttaaaat gatacttaaa tggaatgaat gcaacgcacc
    20101 gttaaaaaga aacgttagca tagatgacgt tggcaaaagc ggaatgtatc ttttaagtga
    20161 ccttgctagc ggtgttacag gtgaaattca ttacgttgat gcagggtata atataatggg
    20221 aatgggcgac gccgtagtag gcgaaaacgg ctctacggtt cttgcgtggg atgaatgcaa
    20281 agaataagct aaattcatag ctaaatttat agtcaaattt gagtaaattg cttaaatttg
    20341 actatctgct tttacttaaa aaaatcacaa atatcacaat caaaaagttt agaaagttta
    20401 aaaagatgaa gcaagttaaa gtgctttcca tgagcattgt tttccatatt ggcataaaat
    20461 ccactagaag cttgacctat actaagagca gtttcaagct gacttaaacc aagattttgt
    20521 cttattcttt ttacattttt tgctactaaa tcaaaaaatt c
//
LOCUS       DAPPKW010000023        20514 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.023, whole genome shotgun sequence.
ACCESSION   DAPPKW010000023 DAPPKW010000000
VERSION     DAPPKW010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 20514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20514
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.023"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            89..574
                     /locus_tag="RPW04_000785"
     CDS             89..574
                     /locus_tag="RPW04_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin domain-containing protein"
                     /protein_id="HDX6294890.1"
                     /translation="MSKIGVIYGSNQGDTKEVAEYIASKFDSEIINATDLTADFFTKF
                     DKFIFAASTHGHGELQKDFKAKLGLVAEADFNGKTIALVGVGGQVKHGSTFLDGLVEF
                     LPLIRGAKLVGSSQVDGYKFSHSLSFINGKFIGASIDFKNDPNWKARADKWVDSVKNE
                     F"
     gene            complement(638..2446)
                     /locus_tag="RPW04_000786"
     CDS             complement(638..2446)
                     /locus_tag="RPW04_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoX family phosphatase"
                     /protein_id="HDX6294891.1"
                     /translation="MQRRNVLKLGSLACMGGFFANPLLSTPSKNLINFDSVPISTDDD
                     FKAPKGYKAKVLIKWGDKMFSKAKSFDENKNIDKIYAENANLVFGDNADGQKYFSVND
                     STEGILVTNNEYVNPELMFNHNGNQMSANDIIYQQNSLGISIIDIKRDNSNLYEFVID
                     GKHNRRITMSTPMLITGVVKGDDSVKTNNDPKGEIVFGTINNCGCGKTPWGTYLTCEE
                     NFDDFFGSKDSLFEPNKSFKRYGIKTKGDVYKWHLFDDRFDIKITPNEPNRFGWIVEI
                     DPFDPNSMPKKRTALGRFKHENCEIVVDKTGNVVAYSGDDENNEFVYKFIARDKFNYQ
                     NMKANRDILEFGTLYVAKFEGEFGDFKGKLKWIELSMGKNGLTKENGFISQADILIRA
                     REAASFVGATAMDRCEWISKDPNSEFLYATFTNNKIRQTPDAANPRAYNKYGQILKWK
                     PTGQNHASNEFIWEIFVLAGNPKVKNNLYKGSNNININNMFNSPDGLSFDRDGRLWIA
                     TDGDYSNSADYEDMGNNQLLCADPYTQEIKRFATGPIACEITGITFSDDYKTMFVSVQ
                     HPGEGLKGSNFPKREDKTPKSSVIMIVKEDGGIIGS"
     gene            complement(2543..3544)
                     /locus_tag="RPW04_000787"
     CDS             complement(2543..3544)
                     /locus_tag="RPW04_000787"
                     /inference="COORDINATES: protein motif:HMM:NF012745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDX6294892.1"
                     /translation="MSKISVIIPCFNARDYINECLESLLNQSLKEIEIIAINDGSSDD
                     TIKILNEFANTDNRFIIIDQKNNGASAARNAGIEASSGEFIMFLDSDDFLSSNGILNK
                     LYNIALNLDADIVFGDFNYYKNGEIKYQKNYICNEGIVDKERFLFDYFTLNPSKSTFP
                     TVCAKIIKTEILKNNNLKFLKDVFIAEDANLNAKIIWLANKIAKLNDPIYNYRIGDNN
                     SSKKFKLKHFTDVRAVEMDLRNFFSKFNLLKTQKAYLECYFLILRYNAALTMKPYSFD
                     DYEKAIKFACADIKNSFKSDGFTLLNKRLKILFYLYKFSCNYKIYAKLLSFIFKIRH"
     gene            complement(3544..4713)
                     /locus_tag="RPW04_000788"
     CDS             complement(3544..4713)
                     /locus_tag="RPW04_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HDX6294893.1"
                     /translation="MLSKKIGVLSESLTIAISSKAKEMKANGQDVISFSAGEPDFDTP
                     NVIKEAVKRALDSGCGKYTPVPGRPEVLKAIATKLKRDNNLEYKTNQIVTNVGAKHSL
                     FNIFQCIIDDGDEVIMASPYWVSYPEIVKFSGGKPVIIETDESSKFKLTSEALKKAIT
                     PKTKAIVLNSPSNPCGGVYTKAELQAIAKVLEGTDIIVLSDEIYEKLTFNGEFVATAS
                     ISPDMFKRTITINGLSKCGAMPGWRFGYMASVIDDLVAAVKKLQSQSTSNISSLVQDG
                     AIPALLGEADKDIEFMRSKFIERRDYAVAALNAIKGLNVVKPDGAFYLFVSCKDIESD
                     SVKFCKDMLENALVATVPGVGFGMDGYFRLSFACDMDSIKKGIDRIAKFVESYKK"
     gene            complement(4719..5414)
                     /gene="cysE"
                     /locus_tag="RPW04_000789"
     CDS             complement(4719..5414)
                     /gene="cysE"
                     /locus_tag="RPW04_000789"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HDX6294894.1"
                     /translation="MSFWNIIKEDLNQPKVQDPAYRCCVELIFNYPGVWAIVNYRFTH
                     FLWEKNWHKLARILAGISNFLTRVDLHPAAKIGRRVFIDHATGVVIGETAIIGDDCLI
                     YQGVTLGGVSLEKGKRHPTLEDGVVVGAGAKILGNITIGKGSKIGANSVVVKDVGANC
                     TAVGVPARAVGGCAQPFEHNKLPDITKEMLGYLIKKLEILEKEVAKSSDNIIKPDIEL
                     DELYKQYIKSIKE"
     gene            complement(5418..7259)
                     /gene="speA"
                     /locus_tag="RPW04_000790"
     CDS             complement(5418..7259)
                     /gene="speA"
                     /locus_tag="RPW04_000790"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002818539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HDX6294895.1"
                     /translation="MTNDYGLSLWGDSNFIIDSGKVCLNTDFKPAIIDIVKDIRDDGY
                     RGPLLLRFPHLIKKQIVQVYSSFDRAKKEFEYSGSFNAVYPLKVNQYPGFVENLVKLG
                     ESYGYGLEAGSKAELLLAMAYNNYGAPITVNGFKDKELIDIGFIAAEMGHNITLTIEG
                     LNELEAIIATAKERFTPKPSIGLRIRLHSSGTGVWAKSGGINSKFGLTSTELIEAVNL
                     LKDNELIEQFTMIHFHIGSQINEIHPLKKALVEAGNIYAELRKMGASNLKAINLGGGL
                     AIEYSQFKEHPSRNYTLKEYANDVVYLLKTIANQKNEIEPDIFIESGRYIAANHAVLV
                     APVLELFSQEYTEEKLVLKKNNPPLISELYDLYTSIKPSNAIEYLHDSIAHMESVLTL
                     FDLGYVDLHDRSNSEILVHLIMKKAISMLGNKQNYAELLKIQEEVQERYLVNFSMFQS
                     LPDFWGLGQNFPVMPLDRLDERPTLSASIWDITCDSDGEISFDANKNPLFLHDVDVEK
                     EQYFLGFFLVGAYQEVLGMKHNLFTHPTEATVFLNDSGSYEIKNILESQSIMDILEDL
                     DYDIHAIRDILNERIENSTLVDEKQKKHILGELYLFLNDNGYLKTIG"
     gene            complement(7256..8485)
                     /locus_tag="RPW04_000791"
     CDS             complement(7256..8485)
                     /locus_tag="RPW04_000791"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012001784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDX6294896.1"
                     /translation="MINALRGMKDLLDSDGKLYKFIVETCEQITKNYGYELCETPKME
                     ETSLFKRSVGESSDIVGKEMYQFIDKGGNDVCLRPEGTAGVVRAFIEAKFDKAGGVKR
                     YYYYGSMFRYERPQRGRLREFHQFGVECFGEASVYEDASVILMLNEILDKFGIETTLK
                     INSLGDSECMPKYRQKLISFIDEKKDQLCEDCRRRLVTNPIRVLDCKKEHCQILLKNA
                     PLITENLNEECYSEFEQLKDILTKNGVKFEVDGRLVRGLDYYCKTAFEFVSDEIGSKS
                     AVAGGGRYDRLVDFLGGKSTPAVGWAMGIERIMEILKQKDMPNSRDGIYICALDKKYI
                     DEIYKIGFKLRKNYKVEISYEAKSPNKHLNLADKKFAKLFLCMGEDEAKNGEIWYKNL
                     ENKNEKRIKILNLEGEL"
     gene            complement(8482..9060)
                     /locus_tag="RPW04_000792"
     CDS             complement(8482..9060)
                     /locus_tag="RPW04_000792"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012001783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDX6294897.1"
                     /translation="MLVNFEGVDGVGKSTQISLLKEFRNDAVITKEPGGTEFGLMVRD
                     YLLKNASKISNKTEIFLFLADRAEHYEKVLKPNYANLVLNDRSFVSGMAYAMANDSSL
                     DIGLLLDLNKFALNGDLGDKFVFLKADEILLRNRLFSRGTSDEIEMRGIEYLMRVQGF
                     MSIILSDLKFDVLEIDASLEVLEIQEKIRKFI"
     gene            complement(9054..9533)
                     /gene="coaD"
                     /locus_tag="RPW04_000793"
     CDS             complement(9054..9533)
                     /gene="coaD"
                     /locus_tag="RPW04_000793"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDX6294898.1"
                     /translation="MNKSCIYPGTFDPITNGHMDVIKRACRVFDNVIVAVALNESKTP
                     YFCYEERISLAKTATKDIPKVSVIGFDNLLVDFAKSKGINTVVRGLRAVSDFEYELQI
                     GYANASLWSEFETVYFMPSLKNAFISSSIVRSVLKHGGDIGSLVPTNVLEEIKGKLC"
     gene            complement(9537..9965)
                     /gene="flgA"
                     /locus_tag="RPW04_000794"
     CDS             complement(9537..9965)
                     /gene="flgA"
                     /locus_tag="RPW04_000794"
                     /inference="COORDINATES: protein motif:HMM:TIGR03170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HDX6294899.1"
                     /translation="MPNKLNKSIFFKFKIDANVNVLVAIKDIDRDHILNLSDYEQKSV
                     SLKEYDKEALKEAPKNIKLITRTRIKRGKILTNRQFKTLSDIKKGDLINAVLKDGALN
                     IEVLVTALEDGNVGDIIQVRNENNQVFKANVISKNRVLIR"
     gene            complement(10196..10270)
                     /locus_tag="RPW04_000795"
     tRNA            complement(10196..10270)
                     /locus_tag="RPW04_000795"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10236..10238),aa:Gly,seq:gcc)
     gene            complement(10317..11495)
                     /locus_tag="RPW04_000796"
     CDS             complement(10317..11495)
                     /locus_tag="RPW04_000796"
                     /inference="COORDINATES: protein
                     motif:HMM:NF013183.1,HMM:NF015418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDX6294900.1"
                     /translation="MDVKSVFETISNLKPVENYEFISLDTAFGRVLASDIIAVKPLPA
                     FDNSALDGYAFNYNDRKNPLLIKGTIFAGDKKEYRIEKNECYKIMTGAIFPTRSDTVM
                     MIEDESFDENGYLIIKDNVKKYNARKMAGEEAKIGDILLYKNELLTPANIMLLAAQGI
                     SYVKVFSNLKIAIFSSGDEINEPWQNSDERSIYNANAFGVLAMLKQNGFDAEYKGILK
                     DEKNILKEQIKNAKNYDVLITSGGASKGEADFMQSVLLELGFKEIFSSIDVRPAKPTK
                     LYQNDSQIVFILPGNPMACFMGCFLSVVPAIKKLCGFNEFLHKTYKAKFKGNLKLKPT
                     RANIVIGRYENGEFIVTNENKFSPAMIIPISISNAIYISSIGEGEISDQEIVEIYKLS
                     "
     gene            complement(11507..12766)
                     /gene="murA"
                     /locus_tag="RPW04_000797"
     CDS             complement(11507..12766)
                     /gene="murA"
                     /locus_tag="RPW04_000797"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDX6294901.1"
                     /translation="MDYLEIKGGKKLFGSVYISGAKNAALPLIAMSILAKNDVVIRNI
                     PQVADIKTLIKLLQNLGAVSKFENLDLVINTTTINSTKATYDIVRKMRASILVLGPLL
                     ARFGHCEVSLPGGCAIGARPIDLHLSALEKMGANIEIKDGYVIARAKDGLKGANIIFD
                     KITVTGTENIVMAAALARGTTKILNAAKEPEVVQVCQILNDSGIKIEGIGTNELTIYG
                     GGGELLNLNKICVIPDRIEAGTYLCAAAIAGGEITLKQVEPNHLVSVLGKLSDMGVNF
                     ELGDKSIKVISDAKLSPVQIITTEFPGFPTDMQAQFMALACVANGVSTIDERLFENRF
                     MHASELNRMGADIKLNGHIATVSGVSLNGADVMATDLRASSALVLAALVANGTTRVHR
                     IYHLDRGYENLEIKLQSLGADIKRLSE"
     gene            12872..13501
                     /locus_tag="RPW04_000798"
     CDS             12872..13501
                     /locus_tag="RPW04_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDX6294902.1"
                     /translation="MTLKTVIVGVAGAFIFAGCSFKTTPPTSQSAGKFHQYEFNNVYN
                     VNLSKYINKKLGKDCSGFVSLVNQDSNSIYFNSSELDNFYDKEGRKSQAIFNLYKSQN
                     KIYFIDPKPGDLVFFSNTTHNTKTSKQKKITHLGIIQDINSNGTISFVHNTSGKNIKS
                     VMNLKYKNLHMINGKKVNAYIITKCQSKSCLVSNKFAGFGKVDKTLKIN"
     gene            complement(13590..14231)
                     /locus_tag="RPW04_000799"
     CDS             complement(13590..14231)
                     /locus_tag="RPW04_000799"
                     /inference="COORDINATES: protein motif:HMM:NF014628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HDX6294903.1"
                     /translation="MSSKEIILNKIKSSGYKMPNIDVSAPSQNPSSHIISSDDDIYAE
                     FTQRIVANKALLVESSPEKLNEDIQKIIDKETVKNLIYPDSLSFDVANLNIENKFKFD
                     KPVDGFKAQIFDYDVSIIDARGGVSSHGVACIASSKSQPRLLSLTPKVCIALIKKDSI
                     VKSLCDMLNRIKKEDGKLPTNVVFISGPSRTSDIELQLVLGVHGSQIFYAVTY"
     gene            complement(14224..15648)
                     /locus_tag="RPW04_000800"
     CDS             complement(14224..15648)
                     /locus_tag="RPW04_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HDX6294904.1"
                     /translation="MNAHEDIIIQKLADKQMRANLDSAMHTLQTNRAKLINANFKDWQ
                     GLRQKGKFVKQKALNTLGERLIEFEKNATDNGFKIHWASTAEEACEIIYNLMVDKGID
                     TILKGKSMASEEIHLNHYLEDRGMKPFETDLGEVIIQLIGEPPVHIVVPAIHKNRYEI
                     GEIFHEKWGAKKESEPEKLNAIARQKMREEFKTLKMGLSGVNFALSKEGAIWLIENEG
                     NGRMCTTMPDILVSICGIEKVVESIEDAATTDTLLSPSATGQFITNYNNIISGPRRDG
                     ELDGPRECHIILLDNNRTNMLAHEEYSEALRCIRCGACMNFCPVYDKIGGHSYRAVYP
                     GPIGEVISPQIFGMDNYGDIVSLCSLCGRCSEVCPVEIPLADLIRKLRRDKIGEGKNP
                     PMGTSNLEKNRAEQIAFKGYSSMATNGFIWRTAMKSAGIFSSILQNGRWMPVISNWLN
                     YKDLPDFKYDLHKEIKQIQGVRYE"
     gene            complement(15645..16379)
                     /locus_tag="RPW04_000801"
     CDS             complement(15645..16379)
                     /locus_tag="RPW04_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDX6294905.1"
                     /translation="MQDKVYLYATCLGSATMGRMVVSAAKLLQNCGVEVIFKKDQTCC
                     GQPSYNSGYFEESKKIALYNVELFSEDYPILVPSGSCAGMMMHDYVELFENDANYEKV
                     KKFSSRVMDLCEFLDTQLPIKDKGDPIKVTWHSNCHALRVTKSIEHAKNLIKKLNNVE
                     LIELQREEECCGFGGTFAVKEPEISNAMAKAKIDDIKKTGVKYLISADGGCLMNIAGT
                     MSKMGEDIKSIHLYDFLLKRTEGGLI"
     gene            16574..17092
                     /locus_tag="RPW04_000802"
     CDS             16574..17092
                     /locus_tag="RPW04_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HDX6294906.1"
                     /translation="MTATPFLIAINAVVYFLEYFVYNSRSFSIFFGLNELFFEGAYWQ
                     LITTMFLHGSLMHILMNMAVLYQFGMLLERYLGSVKFLLLYIVGGVITSALSLSYLMF
                     ANVNLVGASGAISVLLGFMANLDRYSRKGLIIAILLMSFAPLLLGINIAWYAHLFGFA
                     IGYLAAFLKVFR"
     gene            17089..17892
                     /locus_tag="RPW04_000803"
     CDS             17089..17892
                     /locus_tag="RPW04_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HDX6294907.1"
                     /translation="MNFFDEVWEILNESRLEIKFFKFEQLFFKFKNDEYEFNVNFIPK
                     SLTTPSYAKICDVCEMKDLKKHSQNKALATFLHSIAHIEYSAIDIALDACYRFLNLPK
                     EFYFDWLEVADDEIKHFKMINEKLENAGYNYGYFTVHNGLFIAMQKTENSLLDRMAVL
                     PRFMEANGLDANLFMMKKIANDKQKNYLLDILKTIHDEEIGHVKKGDKWFKFACKEQG
                     VDPKEWMNIVLKHYPKAFHTKRELDVKHRLMAGFDQSELDKIIDLQEKQ"
     gene            17889..18368
                     /locus_tag="RPW04_000804"
     CDS             17889..18368
                     /locus_tag="RPW04_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDX6294908.1"
                     /translation="MKKIYFIRHAKATKETNNDFDRDLNDKGKINAKFMGKRLKKHSV
                     IPDMIFSSPAKRAIKTANLISKEIGYKKDIKTVKELYEASLESIFKFLNSLNDELNSV
                     FIIGHNPSLTEICEFLSDSDIGNIPTSGIFCIEFEGSFEHIKESHAHALFFDYPKKH"
     gene            complement(18388..19545)
                     /locus_tag="RPW04_000805"
     CDS             complement(18388..19545)
                     /locus_tag="RPW04_000805"
                     /inference="COORDINATES: protein motif:HMM:NF021624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HDX6294909.1"
                     /translation="MTDNGIMYVSYNTYPGWKYKDIIRDLMVYSSKNETSDIARLEKS
                     KHMLKSYVEYINALPDGSMRKNGFSSVMLENAKNIADSYENFYILHEYLETFNDPCYF
                     YEFVERAKNQDLEYLIDASMTPTYITCIDDLPQNSRPNERIQKEQYGDFLSNRAFRSS
                     VLTTSKNASSITEALNGTFKKTDIDKLYFFGKFDITDNYIEDRNKAVKYQTTYEWITQ
                     EFNSNYPNSLNSAYFLEKYPQKENEIYEALMKFICYGSINFTNIELKALAYKPNETRI
                     KQNYENYIKYFSKESDPVIAMATALNLLVGEMTAQDARFALMFDGKNSIDDIVLAVKK
                     FLKTGKQRFTRTKSDGTTVVVTDQAEIEATCTDYVLGLEQKLRNAYYFEAI"
     gene            complement(19542..19955)
                     /locus_tag="RPW04_000806"
     CDS             complement(19542..19955)
                     /locus_tag="RPW04_000806"
                     /inference="COORDINATES: protein motif:HMM:NF014414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDX6294910.1"
                     /translation="MKDIKKTYDDFPYKSKPFANSSIYKLESIATLLGLSPAPVNNAR
                     VLEIGCSFGGNLIMSAISNPESEFIGIDISETQINLGKKLIKDMKIKNLKLMQLDISH
                     ATQELGKFDYVISHGVYSWVPDDVKNAILGGVESF"
BASE COUNT         6276 a         3731 c         2991 g         7516 t
ORIGIN      
        1 aaatttaact aaaagatata attttttaag cacatttttt atcttaatta gatataatca
       61 taaaataatt ttattttaag gatagtagat gtcaaagata ggcgtaattt atggctcaaa
      121 tcaaggcgat acaaaagaag ttgctgagta tatagctagt aaatttgata gtgaaattat
      181 taatgctact gatttaacgg ccgatttttt cactaaattt gataaattta tatttgcagc
      241 ttctactcat ggtcatggtg agcttcaaaa agattttaaa gctaaactcg gactagttgc
      301 cgaagctgat tttaatggaa aaaccatagc tttagtcgga gtaggcggtc aagttaagca
      361 cggatctacg tttttagacg gtttagtaga gtttttaccg cttatccgcg gagccaaact
      421 agttggctct agtcaagttg acggatataa atttagccat tcgttatcat ttataaacgg
      481 taaattcatc ggagcttcaa tagactttaa aaatgatcca aattggaaag caagagctga
      541 taaatgggtc gatagtgtga aaaacgagtt ttaaatcaca actcgttttg ctgtgtgctg
      601 gcttgtccaa cacacaattt tatagtgata aatttattta tgaaccgata atcccgccat
      661 cttcttttac tatcattatt acagatgatt ttggtgtttt atcttctctc tttggaaaat
      721 ttgaaccttt tagtccttct cctggatgct gtacgcttac aaacatggtt ttataatcat
      781 cgctaaaagt aattcctgta atctcacaag ctatcggccc tgttgcaaat ctcttgatct
      841 cttgagtata cggatctgcg cataaaagtt ggttgtttcc catatcttca taatctgcac
      901 tgtttgaata gtcgccatcc gttgctatcc aaagtcttcc gtctctatca aaactaagtc
      961 cgtccggaga gttaaacata ttatttatat ttatattatt actaccttta tataaattat
     1021 ttttaacttt tgggtttcct gctagaacaa atatttccca gataaactcg ttgctagcat
     1081 gattttgacc agttggtttc cattttaaaa tttgaccgta tttattataa gcgcgtggat
     1141 ttgccgcatc tggtgtttgt cttattttat tatttgtgaa agtagcatac aaaaattctg
     1201 aatttggatc tttgcttatc cactcacacc tatccatagc agtagcacct acaaaactcg
     1261 ctgcttctct agctcttata agtatatcag cttgcgatat gaaaccattt tctttggtaa
     1321 gcccgttctt tcccatactt agctctatcc attttaattt gcctttaaaa tctccaaatt
     1381 ctccttcaaa tttagccacg taaagcgtgc cgaattctaa aatatctcta tttgctttca
     1441 tattttgata attaaattta tctcttgcta taaatttata aacaaattca ttattttcgt
     1501 cgtctccgct ataagccact acgttacccg ttttatcgac tactatctca cagttttcat
     1561 gtttaaatct accaagggct gttcgttttt taggcattga gtttggatca aacggatcta
     1621 tttctactat ccagccaaat ctatttggct cattcggagt aatttttatg tcaaatctat
     1681 catcaaaaag atgccattta taaacatctc cttttgtttt tataccatat cttttgaagc
     1741 ttttgttggg ctcaaacaaa ctgtctttag agccgaaaaa atcatcgaaa ttctcttcgc
     1801 aagtaagata tgtcccccat ggagtttttc cgcatccgca gttatttatc gtaccgaaca
     1861 cgatttctcc ttttggatca ttatttgttt ttacgctatc atctcctttt acaacaccgg
     1921 ttatgagcat aggagtgctc attgttatcc tgcggttatg tttgccgtct ataacaaact
     1981 catataaatt tgaattatct ctttttatat ctataatact tatcccaaga ctattttgtt
     2041 gatatatgat atcatttgca ctcatttggt tgccgttgtg attgaacatt agctcaggat
     2101 ttacgtattc gttatttgtt accaaaatac cttctgttga gtcatttacc gaaaaatatt
     2161 tttgaccatc agcgttgtct ccaaatacca aatttgcatt ttcagcataa attttatcta
     2221 tatttttatt ttcatcgaaa ctttttgctt tactaaacat tttatcgccc catttgatca
     2281 aaacttttgc tttgtaacct ttgggggctt taaaatcatc atccgtgcta ataggaacag
     2341 aatcgaaatt tattagattt tttgaaggtg tgcttaaaag aggatttgca aaaaatccac
     2401 ccatacaagc taaactaccc aacttcaata catttcgcct ttgcattttg tttcctttta
     2461 aatttaatat aattaaaatt taacatgaat tggaaacaaa atagctacat tttataaaat
     2521 atctaagccg attttaactg ttttaatgtc tgattttgaa tataaaactt aataatttcg
     2581 catatatttt gtagttacaa ctaaatttat atagataaaa tagtattttt aatctcttgt
     2641 taagcagtgt aaatccatcg cttttaaaac tgttttttat atccgcacaa gcaaatttaa
     2701 tggctttttc ataatcatca aaactatatg gtttcatagt tagcgccgcg ttatatctta
     2761 aaatgagaaa ataacattcc agataagctt tttgagtttt taaaaggtta aatttagaaa
     2821 agaaatttct taaatccatt tctacggctc taacatcggt aaaatgttta agtttaaatt
     2881 tttttgaact attattatct ccgattctgt agttataaat cggatcgttt aattttgcga
     2941 ttttgtttgc tagccatata attttagcat ttaaattcgc atcttcggct ataaaaacgt
     3001 cttttaagaa ttttaaattg ttattcttta aaatttcggt tttgattatc tttgcacata
     3061 ccgtaggaaa agtactttta gatggattta aagtgaaata atcaaacaaa aatcgctctt
     3121 tatctactat tccttcatta caaatatagt ttttttgata ttttatttca ccgtttttat
     3181 agtaattaaa atcaccaaat acgatatctg catctaaatt taaagcgata ttataaagct
     3241 tatttaaaat tccatttgag cttagaaaat catcgctatc taaaaacatt ataaactcac
     3301 cactactagc ttctattcct gcatttctag ctgcgcttgc gccattattt ttttgatcta
     3361 tgataataaa acggttatcg gtattggcaa attcatttaa aatctttata gtatcatcac
     3421 tgcttccatc attgatcgct attatttcta tctcttttaa actttgattt agtagtgatt
     3481 ctaagcactc atttatataa tcccttgcat taaagcaagg gattatcacg ctgattttcg
     3541 acactatttt ttatagcttt ctacaaattt agctattctg tcgatccctt tttttatgct
     3601 atccatatcg caagcaaaac ttaatctaaa gtatccatcc ataccgaatc ccacgccagg
     3661 aacagtggct acaagtgcgt tttctagcat atctttacaa aatttcacag agtcagactc
     3721 gatatcttta caacttacga atagataaaa tgcaccgtct ggttttacga cgttaagtcc
     3781 ttttatagcg tttaatgcag ctactgcgta gtcgcgtctt tctataaatt tagatcgcat
     3841 aaactctata tctttatctg cttcaccaag caaagcaggt atggctccgt cttgaacgag
     3901 actagagata ttactagtgc tttggctttg taatttttta actgctgcaa caagatcatc
     3961 tataacgcta gccatatatc caaatctcca gcccggcatc gctccgcact tgctaagacc
     4021 gtttatagtt atagtacgtt taaacatatc gggacttatg ctagctgtgg ctacgaactc
     4081 accgttaaat gtaagctttt cataaatttc atcgcttaaa acaatgatat ctgtaccttc
     4141 taaaactttc gctatagctt gaagctcagc ttttgtataa acgccgccgc atggattgct
     4201 aggactgttt agtacgatag cttttgtttt tggagtgata gcttttttta aagcttcgct
     4261 tgtgagttta aatttactgc tttcatcagt ttctattata actggttttc cgccgctaaa
     4321 tttaactatc tcaggatagc ttacccagta tggagaagcc attataactt catctccatc
     4381 atctataatg cactgaaaga tattgaacaa agagtgtttt gctcctacgt ttgtaacaat
     4441 ttgatttgtt ttgtactcta agttgttgtc tctttttagc tttgtagcta tagcttttaa
     4501 tacttcaggg cgtcctggca ccggagtata ttttccacaa ccagagtcta atgctctttt
     4561 tacggcttct tttataacat ttggggtatc aaagtcaggt tcgcctgcgc taaaacttat
     4621 gacatcttgc ccgtttgcct tcatctcttt tgcttttgag ctaatagcta tggttaggct
     4681 ctctgaaagt actccaatct tcttagataa catctttttc actccttgat tgattttatg
     4741 tattgtttat ataattcgtc taattcgata tctggtttta tgatattatc gctacttttt
     4801 gcaacttctt tttcaagtat ttctaatttt tttataaggt atcccaacat ctcttttgtt
     4861 atatctggaa gcttattgtg ctcaaaaggt tgagcacatc cgccaactgc tctagcagga
     4921 actcctacgg cagtacaatt agcacctaca tcttttacta caactgaatt tgctcctatc
     4981 ttagagcctt ttcctatagt tatatttcca agtattttag ctccagcccc tacaactact
     5041 ccatcttcta aagtagggtg gcgctttcct ttttcaagac ttactccacc aagagtaact
     5101 ccttgatata tcaaacaatc atctcctata atcgcagttt cacctattac tactccagtt
     5161 gcgtgatcta tgaaaactct tctacctatt tttgcggccg gatgaagatc tacccttgtg
     5221 agaaaattac ttataccggc taaaattcta gctaatttat gccaattttt ttcccataaa
     5281 aaatgagtaa aacgataatt tactatagcc caaacaccag gatagttaaa tataagctct
     5341 acacaacatc tataagctgg atcttgcacc tttggctgat ttaaatcttc ttttataata
     5401 ttccaaaagc tcatatttta tcctatagtt tttaagtagc cattgtcatt taaaaacaga
     5461 tataattccc ctaaaatatg ttttttctgt ttttcatcaa ctagcgtaga gttttctatt
     5521 ctttcattta gaatatctct aatagcatgt atatcataat ccaaatcttc caaaatatcc
     5581 atgatagact gagattcaag tatattttta atctcataac taccgctatc atttaaaaat
     5641 acagtcgctt ccgtcgggtg ggtaaaaaga ttatgtttca taccaagcac ctcttgatat
     5701 gctccaacta agaaaaatcc taagaaatac tgctcttttt ctacatctac atcgtgtaaa
     5761 aatagcggat ttttatttgc atcaaagctt atctctccat cgctatcaca agtgatatcc
     5821 caaatagacg cagataaagt agggcgctca tcaagtctat caagaggcat tacagggaag
     5881 ttctgtccaa gaccccaaaa atcaggcaaa ctttgaaaca tagagaaatt cactaagtat
     5941 ctttcttgaa cttcttcttg aattttaaga agttctgcgt aattttgttt gttaccaagc
     6001 atggaaatag cttttttcat aattaggtga actaaaatct ctgaattcga gcgatcatgc
     6061 aaatctacat aaccaaggtc aaatagcgtc aaaacgcttt ccatatgagc aatgctatca
     6121 tgaagatact ctatagcatt gctaggtttt atactagtat aaagatcgta aagctcgctt
     6181 ataagaggag ggttattctt ttttagtact agtttttctt ctgtgtattc ttgactaaat
     6241 aactcaagca cgggagcaac caaaacagcg tgatttgcag ctatatatct accgctttct
     6301 ataaaaatat ccggttcgat ttcgtttttt tgatttgcta ttgtttttag cagataaaca
     6361 acgtcgtttg catactcttt tagtgtatag tttctgctag gatgctcttt aaattgggaa
     6421 tattctatag ctaaaccgcc gcctaaattt atagctttta aatttgaagc tcccattttt
     6481 ctaagctctg catatatatt accagcttct acaagagctt ttttaagagg atgaatttcg
     6541 tttatctgac ttccgatatg aaaatgtatc attgtaaatt gctctataag ttcgttgtct
     6601 tttaacaaat tcacggcttc aatgagctct gttgaagtta atccaaattt ggagtttata
     6661 ccgccgcttt ttgcccaaac accagttccg ctgctatgaa gtcttatgcg aagccctatg
     6721 cttggttttg gagtaaatct ctcttttgcc gttgcgatta tagcttcaag ctcatttagt
     6781 ccttctatgg taagagtgat gttatgcccc atttcagcag cgataaatcc tatatctata
     6841 agctctttat ctttaaatcc atttacggta ataggagctc cgtagttatt gtaagccata
     6901 gctagcaaaa gctctgcttt acttccggct tccaaaccgt atccatatga ctcgcctaat
     6961 tttactagat tttccacgaa acctgggtat tgatttactt tcagcggata aacggcgttg
     7021 aagcttcctg agtactcaaa ctcttttttg gctctgtcga aactagaata aacttgaaca
     7081 atctgttttt taataagatg aggaaatcta agtaataaag gacctctata tccatcatct
     7141 cttatatctt ttactatatc gattatggca ggtttaaaat cagtgtttag gcatactttt
     7201 ccgctatcta tgatgaaatt tgagtctccc cataaactaa gtccataatc atttgtcata
     7261 attcaccttc taaatttaaa atctttatac gcttttcatt tttattttct aaatttttat
     7321 accaaatttc accgtttttg gcttcatctt cacccatgca taaaaatagt ttagcaaatt
     7381 ttttatctgc taaatttaga tgtttatttg gacttttggc ttcataagat atctctactt
     7441 tatagttttt cctgagttta aagcctattt tataaatttc atctatatat tttttatcta
     7501 aagcacagat ataaatacca tctctagaat taggcatatc tttttgtttt aatatctcca
     7561 ttatacgttc tattcccata gcccagccta ctgcaggagt agattttccg cctaaaaaat
     7621 cgactaatct atcatatctt ccacctcctg ctaccgcact tttagagcct atttcatcgc
     7681 ttacaaactc aaatgcggtt ttgcagtagt aatcaagccc tcgaacaagt cttccatcta
     7741 cttcaaattt aactccattt ttagttaaaa tgtcttttag ttgttcaaat tcactgtaac
     7801 actcttcgtt taaattttca gttataagcg gtgcattttt aagcagtatt tggcaatgtt
     7861 cttttttaca gtctaatacc ctaataggat ttgtaacaag tctacgacga caatcctcgc
     7921 acaattgatc ttttttttca tctataaaag aaattaattt ttgtctgtat tttggcatac
     7981 attcactatc gccaagagaa tttatcttta atgtagtttc tataccaaat ttatctaaaa
     8041 tttcgtttaa cataagtatg acgcttgcat cttcataaac gcttgcttct ccaaaacact
     8101 ccacgccaaa ttgatggaac tctcttaagc gtccgcgctg tggtctttcg taacgaaaca
     8161 tactgccata gtaataataa cgcttcactc caccggcttt gtcaaattta gcttctataa
     8221 aagctcgaac tactccagca gttccttctg gtcttaagca gacatcgttg ccgcctttgt
     8281 cgataaactg atacatctct ttaccgacta tatcactact ttcaccaacg cttcttttaa
     8341 atagtgatgt ttcttccatc tttggagttt cgcatagctc atatccgtaa ttttttgtta
     8401 tttgttcgca agtttctact ataaatttat aaagttttcc atcgctatca agcaggtctt
     8461 tcatcccacg aagagcattt atcatataaa tttccttatt ttttcttgaa tttcaagaac
     8521 ctcaagcgag gcatcgattt ccaaaacatc aaactttaaa tcggaaagta ttatactcat
     8581 aaatccttga actctcatta aatactcaat cccgcgcatc tctatctcat cactagttcc
     8641 acgactaaat agtctatttc taagcagtat ttcatcggct tttaaaaata cgaatttatc
     8701 tccaagatca ccgtttaacg caaatttatt tagatccaaa agtaagccga tatctaaaga
     8761 gctatcattt gccatagcat aagccatacc agaaacaaag cttctatcgt ttaaaacgag
     8821 atttgcatag ttaggtttta ggactttttc ataatgttcg gcacgatcgg ctaaaaacaa
     8881 aaaaatttcg gttttattgg aaatcttact tgcattttta agtaaataat ccctaaccat
     8941 aagcccaaac tctgtgcctc cgggctcttt tgttatcacg gcgtcatttc taaactcttt
     9001 taaaagtgaa atttgagttg attttccgac gccatcaact ccttcaaaat ttactaacat
     9061 aattttcctt tgatctcttc taacacgtta gtaggaacta aacttcctat atctcctcca
     9121 tgctttagca cggatcttac gatagagctt gatataaaag cattttttaa actcggcata
     9181 aaatatacag tttcaaactc gctccaaaga gaggcgtttg cgtatccgat ctgaagctcg
     9241 tactcaaagt cgctaactgc tctaagaccg cgaactaccg tatttatacc ttttgattta
     9301 gcaaaatcca caagcagatt atcaaaacct ataacactta cttttggtat atctttagtg
     9361 gctgtttttg ctaagctgat tcgctcttca taacaaaaat aaggcgtttt actctcgttt
     9421 aacgcaactg ctactataac attatcaaaa accctgcaag ctctttttat gacatccatg
     9481 tgaccatttg taataggatc aaacgtgccg ggatatatac aagatttatt cattttttac
     9541 cttattaaaa ctctattttt cgaaataacg ttagctttaa aaacttggtt gttttcgttt
     9601 ctaacttgga ttatatctcc tacgttaccg tcttctaacg cagttaccaa tacttcaata
     9661 tttaaagctc catcttttaa aaccgcattt atcaaatcgc ctttttttat atcgcttaat
     9721 gttttaaact gtctatttgt cagaatttta cctcgtttaa ttctagttct tgttataagt
     9781 tttatatttt tcggagcttc ttttagcgcc tctttgtcat actcttttaa gcttacactt
     9841 ttttgttcat aatcgcttaa atttaatata tgatctctat ctatatcttt tatagcaact
     9901 aaaacattta cgttggcgtc tattttaaat ttaaaaaata tgcttttatt tagtttattt
     9961 ggcatttcat aaagagccct aaagtttcca tcattacttc taatagataa tataaaaata
    10021 tcttttagct tatatgaaga aaaatcttgc ggcaaggagc taggtttttc tatcgaaatc
    10081 gaatttatag tagcatttgg aatatcttct ttgatcttaa tttttaaaga ttcggctaaa
    10141 gtaagagcaa aaagattatg tgaaaatatg ataaaaatag tggtaagtat aaagatggag
    10201 cgggaaacga gattcgaact cgcgacccca accttggcaa ggttgtgctc tacccctgag
    10261 ctattcccgc ttgtatcgtt ttggaagcgt gattttacca tatttttgct cataagtcaa
    10321 gataatttat atatttcaac tatttcttgg tcagaaattt cgccttctcc gatacttgaa
    10381 atatatatcg cattagagat agatataggt attatcatcg caggactaaa tttattttca
    10441 tttgtcacta taaactcacc gttttcataa cgaccgatta caatatttgc acgagtaggt
    10501 ttgagtttta aatttccttt aaatttagct ttgtatgttt tatgtaaaaa ttcattaaat
    10561 ccgcaaagtt tttttatagc aggaacgaca gataaaaagc atcccataaa acacgccatc
    10621 ggatttcctg gtaaaataaa tactatttgt gaatcgtttt ggtatagttt tgtaggtttg
    10681 gccggacgca catcgatact tgaaaatatc tctttgaatc ctagttctaa aagtacgctt
    10741 tgcataaaat ccgcttctcc tttactagca cctccgctag taatcaaaac atcgtaattc
    10801 ttcgcatttt ttatctgctc ttttaggata tttttctcat cttttaatat acctttgtac
    10861 tcagcatcaa atccattttg tttcaacata gcaagcactc caaaagcatt tgcattataa
    10921 atagatcttt catcagagtt ttgccatggt tcgttgatct catctccact gctaaaaata
    10981 gctattttca aatttgaaaa aacttttaca tagctgatac cttgagctgc caaaagcatg
    11041 atgttagcag gagttagcag ttcgttttta tacagtaaaa tatcgcctat cttagcttct
    11101 tctccagcca tttttctggc attatatttt tttacgttgt cttttataat aagatatcca
    11161 ttttcatcaa aactctcatc ttctatcatc attacggtat ctgatctagt tggaaaaata
    11221 gctccggtca ttattttata acattcattc ttttctatgc gatactcttt tttatcgcct
    11281 gcaaatatag ttccttttat caaaagaggg ttttttctat cattataatt aaaagcatat
    11341 ccatcaagag ccgagttatc aaaagcaggt aagggtttaa cggcgataat gtcgctagct
    11401 agaactcttc caaaagccgt atctaaactg ataaactcat aattttccac cggttttaaa
    11461 tttgaaattg tttcaaatac gcttttaaca tccatttaat aatcctttat tcgctaagtc
    11521 tttttatatc tgctccaagg ctttgaagtt ttatttctaa gttttcataa ccgcggtcta
    11581 agtgataaat tctatgaact ctagtagttc cgtttgctac aagagcagct agaacaagag
    11641 ccgaactcgc tcttaagtca gtagccatta cgtctgctcc atttaagcta acgccgctaa
    11701 cagtagctat gtgtccgttt aattttatat ctgcacccat acgatttaat tcgcttgcat
    11761 gcataaaacg attttcaaat agcctttcat caattgtgct tacaccattt gccacgcaag
    11821 ctaaagccat aaattgagct tgcatatcgg taggaaatcc tggaaattca gttgtgataa
    11881 tttgtacggg gcttaatttt gcatccgata tgactttgat acttttatct ccgagttcaa
    11941 aatttacgcc catatcgctt aattttccta aaacagaaac caaatgattt ggctctactt
    12001 gttttaatgt tatctctcct cctgctatag cagcagcgca aagatatgtt ccagcttcga
    12061 ttctatctgg tataacgcat attttattta aatttaataa ctcaccgccg ccaccataaa
    12121 tagtaagttc atttgtgccg ataccttcta tttttatacc gctatcattt agaatttgac
    12181 atacttgcac gacttcaggt tcttttgctg cgtttaaaat tttagtcgtt cctcttgcaa
    12241 gagctgctgc cataactata ttttcggttc cagtaactgt tattttatca aatattatat
    12301 ttgcgccttt taagccgtct tttgctcttg ctataacata accgtctttt atttctatat
    12361 ttgcacccat tttctcaagt gcacttaaat ggagatctat aggtctagca ccaatcgcac
    12421 agcctccagg aagtgaaact tcacaatgac caaatctagc taacaaagga cctaacacaa
    12481 gtatagaggc tcgcatttta cgtacgatgt catatgtagc ttttgtagaa ttaatggtag
    12541 ttgtatttat aactaaatca aggttttcaa atttagaaac tgcgcctaag ttttgcaaaa
    12601 gttttataag cgtttttata tccgcaactt gtggaatatt tcttatcaca acatcatttt
    12661 ttgctaaaat actcatagca ataagcggaa gcgcggcgtt ttttgctccg cttatataaa
    12721 cgctaccaaa tagctttttt ccgcctttta tctccaaata atccataata aacctttaaa
    12781 aaataagtat gattatacta tatttatgct tacaattaag aatattttgg tacaatttta
    12841 aaaatttttt atcaatcatt taggatatta tatgacttta aagaccgtga tagtaggagt
    12901 tgccggcgct tttatatttg ctggttgttc ttttaaaact acaccgccta caagccagag
    12961 tgcaggtaaa tttcatcaat atgagttcaa taacgtatat aacgtaaatt taagtaaata
    13021 tataaataaa aaattaggca aagattgttc cggatttgtt agtttagtaa atcaagatag
    13081 taatagtata tattttaatt ctagtgagct cgataatttt tatgataaag aaggaagaaa
    13141 atcacaagct atttttaatt tatataaatc acaaaataaa atatatttta tcgatcctaa
    13201 accgggcgat ctagtatttt ttagtaacac tactcacaac acaaaaacaa gcaaacagaa
    13261 aaaaatcaca catttaggta ttattcaaga tataaattct aacggaacca taagttttgt
    13321 tcataataca agcggaaaaa atataaaaag cgttatgaat ttaaaataca aaaatttaca
    13381 tatgataaac ggtaaaaaag taaatgcata tattattaca aaatgccaat caaaatcttg
    13441 cttagtatcc aataaatttg ccggttttgg caaagtagac aaaactctta aaataaacta
    13501 attaaaatcg aaaatagtat tttaaatttg attaagctaa attaaattta gcttaatctc
    13561 atctgtattt taaatgaaat catttaaact taatatgtaa cggcgtaaaa tatctgcgat
    13621 ccgtgaactc ctagaactag ctgcaactct atgtcgcttg ttctgctagg tcctgatata
    13681 aaaactacgt ttgtaggcag ttttccgtct tcttttttta tcctatttag catatcgcaa
    13741 agcgatttta ctatgctatc ttttttgata agagctatgc agacttttgg agttaagctt
    13801 agaagtcttg gttgagactt tgaagatgct atgcaagcta ctccgtgcga acttacacct
    13861 cctctagcat ctataatact tacatcatag tcgaatatct gagccttaaa tccatctacc
    13921 ggtttatcaa atttaaattt attttctata tttaaatttg caacatcaaa actaagagaa
    13981 tctggataaa tcagattttt taccgtctct ttgtcgataa ttttttgaat atcttcattt
    14041 aatttttcag gcgaactctc cacgagtaag gctttatttg ctacgattct ttgtgtaaat
    14101 tcagcatata tatcgtcatc tgagctaatt atatgacttg atggattctg actaggagcg
    14161 cttacgtcaa tgtttggcat tttatatccg ctagatttga ttttgtttag tataatctct
    14221 ttgctactca tatctaaccc cttgtatctg tttaatctct ttgtgcaaat cgtatttaaa
    14281 atccggaaga tctttatagt ttaaccagtt acttattact ggcatccatc taccgttttg
    14341 taatatactg ctgaatattc ctgcgctttt catagctgtt ctccagataa atccgttggt
    14401 tgccatagag gaataacctt taaatgctat ttgttcggct ctattttttt ctaaatttga
    14461 tgttcccata ggcggatttt taccttcgcc gatcttatct cttcttaatt ttcgtataag
    14521 atccgctaat ggaatttcta ccgggcatac ttccgaacat ctaccacaaa gcgaacaaag
    14581 agagactata tctccataat tatccatacc gaatatttga ggacttataa cttctcctat
    14641 gggtcccgga tataccgctc tatagctatg accgccgatc ttatcatata cgggacaaaa
    14701 attcatacaa gcaccgcatc taatacacct aagtgcttcg ctatactctt catgcgctaa
    14761 catatttgtt ctgttgttat ctaaaagaat tatatggcac tctcgaggac cgtcaagttc
    14821 gccgtctcgg cgcggtcctg agattatgtt gttataatta gtaataaact gtccagtagc
    14881 acttggcgaa agcagggtgt ctgtagtggc ggcgtcttct atggattcaa ctactttttc
    14941 tataccgcag atactaacta atatatccgg catagtcgta cacatcctcc cgttaccttc
    15001 attttctatc agccatattg caccttcttt tgaaagggcg aaattcactc cgcttaatcc
    15061 cattttaaga gttttaaact cttctctcat tttttgtcta gctatagcat ttaatttttc
    15121 cggttcgctt tctttttttg caccccattt ctcatgaaat atttcaccta tttcataacg
    15181 atttttatgg atagctggaa caactatatg aacaggaggt tctccgataa gctgtattat
    15241 aacttctcca aggtcggttt caaaaggttt cattcctcta tcttctaagt agtgatttaa
    15301 atgaatctcc tcactagcca tggatttacc ttttaaaata gtatctatac ctttatctac
    15361 catcagatta tatatgattt cgcaagcttc ttccgccgta gatgcccagt ggattttaaa
    15421 tccattgtca gtagcatttt tctcaaattc aatgagtctt tcgcccaaag tatttaaagc
    15481 tttttgtttt acaaatttac ctttttgtct aagaccttgc cagtctttga aattcgcatt
    15541 tatcagtttt gctctatttg tttgaagagt atgcattgca gagtctagat tcgctctcat
    15601 ctgcttatcg gctagctttt gtatgattat atcttcatgt gcgttcatat taagcctcct
    15661 tctgtgcgtt ttaataaaaa gtcgtataga tggatgcttt ttatatcttc tcccattttg
    15721 ctcatagttc cagctatatt catgagacaa ccgccatccg cgcttatgag gtattttacc
    15781 cctgtttttt tgatatcgtc tatctttgct tttgccatag catttgagat ttcaggctct
    15841 tttacagcaa aagttccacc aaatccacag cactcttctt ctctttgaag ctctataagc
    15901 tctacgttgt ttagtttttt tattaaattt tttgcatgct ctatactttt tgtaactctt
    15961 aaagcgtgac aattgctatg ccacgttact tttataggat cacctttgtc ttttatagga
    16021 agttgagtat ctaaaaactc gcataaatcc ataactcgag agctaaattt tttcactttt
    16081 tcgtaatttg catcattttc aaacaactct acatagtcat gcatcatcat accggcacaa
    16141 gagccgctag gtactaaaat agggtagtct tcactaaaaa gctctacatt ataaagagcg
    16201 atttttttac tctcttcaaa gtagccggag ttataactcg gttgtccgca acaagtttga
    16261 tcttttttaa atatgacttc tacgccgcaa ttttgtagca attttgcagc acttactacc
    16321 attctgccca tagtagcact gcctaaacag gttgcgtata aatagacttt atcttgcata
    16381 catatccttt aaatttagtt taagtctctt atttttatat tataaaacct agctatatat
    16441 tatcatttta taagcaaaaa tttaataaaa acattctttt taattatatt tttctaaaaa
    16501 tgtgagtttt tgtaacattt aagccgattt tttgtaaaat ctcaaataca aagtttcaga
    16561 caaaaggtat aatttgacag caactccgtt tctcatagct ataaatgccg ttgtgtattt
    16621 tttagaatat tttgtttata attcacgctc atttagtata ttttttggat taaatgaact
    16681 tttctttgaa ggagcatact ggcaacttat aaccactatg tttttacatg gttctcttat
    16741 gcacatacta atgaatatgg ctgtattata tcaatttggt atgcttttag aaagatatct
    16801 tggatctgta aaatttttgc tattatatat agtaggcgga gttataacta gtgctcttag
    16861 ccttagttat ttaatgtttg caaatgtaaa tttagtagga gctagcggag ctataagcgt
    16921 tcttttagga tttatggcaa atcttgatag atatagtaga aaagggctta taatagcgat
    16981 tttgttgatg agttttgccc cgcttcttct tggaattaat atcgcttggt atgcgcatct
    17041 ttttggtttt gccataggct atttagccgc ttttttaaag gtatttagat gaattttttc
    17101 gatgaagttt gggaaattct aaatgaaagc cgcttagaaa ttaaattttt taaatttgaa
    17161 caactgtttt ttaaatttaa aaatgacgaa tacgaattta atgttaattt tattccaaaa
    17221 agtcttacaa ctcctagtta tgctaaaata tgcgatgtat gcgagatgaa ggatttgaaa
    17281 aaacatagtc aaaataaagc cctagcaaca tttttacact ctatagctca tatagaatat
    17341 agtgcgatag atatagcact tgatgcttgt tataggtttt taaatttacc aaaagagttt
    17401 tattttgact ggcttgaagt agcagatgat gagataaaac attttaaaat gataaatgaa
    17461 aaactggaaa atgcgggata taattacgga tattttaccg tacacaatgg actttttata
    17521 gctatgcaaa aaacagaaaa tagtctatta gatagaatgg ctgtgctacc tagattcatg
    17581 gaagcaaatg gacttgacgc aaatttattt atgatgaaaa aaatcgcaaa cgataagcaa
    17641 aaaaattacc ttttagatat attaaaaaca atacatgatg aagaaatagg gcatgttaaa
    17701 aagggagata aatggtttaa atttgcctgt aaagagcagg gtgttgatcc aaaagagtgg
    17761 atgaatatag ttttaaaaca ctatccaaaa gcatttcata cgaaacgaga acttgatgta
    17821 aaacataggc taatggctgg atttgatcaa agcgagcttg ataaaattat agatttacag
    17881 gagaaacagt gaaaaaaata tacttcataa gacatgcaaa agctaccaaa gaaactaata
    17941 acgattttga tagagatcta aacgataagg gtaaaataaa tgctaaattt atgggtaaaa
    18001 gattaaaaaa acatagcgtt ataccagata tgatattttc atcgcctgca aaaagagcga
    18061 tcaaaaccgc aaatttaata tcaaaagaga taggatataa aaaagatata aaaaccgtaa
    18121 aagagcttta tgaagctagt ttggaaagta tatttaaatt tttaaacagt ttaaacgatg
    18181 aattaaatag tgtttttata atagggcata atccgagttt gactgaaatt tgcgaatttc
    18241 ttagtgattc agatattgga aatatcccga ccagcggaat attttgcata gaatttgaag
    18301 ggagttttga gcatatcaaa gagagtcatg ctcacgcgct gttttttgat tatccaaaga
    18361 agcattaaac tctctaaaaa taaaagttta aatagcttca aaataataag cgtttctaag
    18421 cttttgctca agccctaaaa catagtctgt gcaagtagct tctatctcgg cttggtctgt
    18481 tacaactact gttgttccgt cgctttttgt tctagtaaat ctttgttttc ctgtttttaa
    18541 aaactttttg acggctaaaa caatatcatc tatactattt tttccatcaa acataagtgc
    18601 aaatctagca tcttgagcag tcatttcgcc gactagtaaa tttaaagcag tcgccatagc
    18661 gataaccgga tccgattctt tgctaaagta ctttatatag ttttcataat tctgttttat
    18721 cctagtttca tttggcttgt atgcaagagc ttttagttct atatttgtga aattgatact
    18781 tccatagcat ataaatttca ttaatgcttc atatatttca ttctctttct gtggatattt
    18841 ttccaaaaaa taggctgagt ttaagctatt tggatagttt gaattgaact cttgggttat
    18901 ccattcatat gttgtttggt attttacagc tttgtttcta tcttctatat aattatccgt
    18961 tatatcaaat ttaccaaaaa aatacagctt atcgatatct gtttttttga atgttccatt
    19021 taatgcttcg gtaattgaac ttgcattttt gctcgttgtc agtacgcttg aacgaaacgc
    19081 tctattggat aaaaagtctc catactgctc tttttgtatg cgttcatttg gcctagagtt
    19141 ttgcgggaga tcatcaatac aagttatata agtaggagtc atagaagcgt ctataagata
    19201 ttcaagatct tgattttttg ctcgctctac aaactcataa aagtaacaag ggtcattaaa
    19261 cgtctctaaa tactcatgca aaatataaaa attttcatat gaatcggcta tattttttgc
    19321 attttcaagc attactgagc taaatccatt ttttctcata cttccatcag gaagagcatt
    19381 tatatattca acgtatgatt taagcatatg ttttgatttc tcaagtctag ctatatcgct
    19441 agtttcgttt ttagaagagt agaccataag atctcttatt atatctttat atttccatcc
    19501 tggataggtg ttgtacgata catacattat accattgtct gtcaaaagct ttctaccccc
    19561 cccaatatcg cgtttttcac atcatctgga acccagctat aaacaccgtg agagataaca
    19621 taatcaaatt ttccaagctc ttgcgtagca tgagaaatgt caagctgcat aagttttaag
    19681 tttttaattt tcatatcttt tataagcttt tttcctaaat ttatctgagt ttcagagata
    19741 tctataccta taaactctga ttcaggatta gaaatagcac tcattataag atttccacca
    19801 aagctacacc ctatctcaag aactcttgca ttattaacag gagcagggga gagacctagt
    19861 aaagtagcta ttgattcgag tttgtatata gagctatttg cgaatggttt tgatttataa
    19921 gggaaatcat catacgtctt ttttatatct ttcatttact tagccttttt aaaatttaag
    19981 taattataac aaaaaaaatt atctattaca acaaaatatt agaaatagaa aaaataagaa
    20041 aattgctaaa atatactatg taaaataata caaataatta tatgtataaa tagatagaaa
    20101 ttattgcatt aaatttaatg gataagtttt tatactacaa aaagtaaagt acatcaaata
    20161 gctataaaat catcatttaa tacataatta gaatagtgca aaaacaagaa ttcataatag
    20221 tttgaaaatt atagttttca atacaaaata ataaaaatag ttaaggtttt accttttaat
    20281 ctaaaattag ccgattattg atcaattata atagctaggc tttagttaga tatactcata
    20341 cttattttct gttttaagcg tatttgaagt atatctaaat ttatgttttt ataaactcgg
    20401 ttggatacgt ttataaagta agtccaaact ttataagatg attaagataa ttttgtttgg
    20461 atatttttag atatttatct catatatgat tgagatgtat tcgtttgcaa agct
//
LOCUS       DAPPKW010000024        19966 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.024, whole genome shotgun sequence.
ACCESSION   DAPPKW010000024 DAPPKW010000000
VERSION     DAPPKW010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19966)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19966)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19966
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.024"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..2117
                     /locus_tag="RPW04_000807"
     CDS             <1..2117
                     /locus_tag="RPW04_000807"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012772.1,HMM:NF013180.1,HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HDX6294911.1"
                     /translation="AIENKKIIIEKYQTLKSISSNDLVYISQNIQYASNLKFVSKLYS
                     YIILSKLGTEFNATMFNHDINMQLNNIGDTKSFDYSLLSAIKDVGNSILALSNLSYDN
                     INLKTTQKIDAFLNAINNHFKSNINDLMISVVVLLFIIILSSTRNIYTSVKNRKNAAK
                     INQMGDMIANSPNQILIINREGKIIDANPAFEQISGYKKSEVLNKTLSFLNTNLKGTN
                     IYDDILQSKQICRYNEFISKSKKGLLIYEKIIAIPTLDEYSQISGAIIVKQDITKERL
                     IAKELGFKTAEIRNSALTDKLTGLGNHIALMEKIDDKKKGIVIYINVNHFSNLRFFYK
                     TSTVDLILTAISETLKLCIETYKMNSSIYRIQLDEFCIWYEGSNINKDVKHILEYFKV
                     KNIDIITSEGREILPNINITMGVSMEADTPNTNRLTQSILAHHEAISNDQNIAFYQDN
                     NIIEQQYHKNQLISRMIQYALNENRVIVECQGIFDIRSSNKPILSSYEILIRIIDSEN
                     KIHYPGEFLGVAKQTSLYIALTKQVISKAFDLLETFCDKKFSINLSSIDMVNESVKKL
                     FMQKLSLCSQPSHLTVEILESEGIDDYASINPFIESIKDHGCKLSIDDFGSGYSNYYR
                     MLELDIDYLKIDGSIIKKLPFDENARSVVQTIVEFANRQKYDVVAEFVSSNEILEQVL
                     SYGIKYAQGFLLGKPIHPSNID"
     gene            2130..2798
                     /locus_tag="RPW04_000808"
     CDS             2130..2798
                     /locus_tag="RPW04_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HDX6294912.1"
                     /translation="MHDVINGAVKFMEEDFLEHKELFEKLGTKQTPHTLFIGCSDSRV
                     VPNLITNTLPGELFVVRNIGNIVPHYRVSEEFLATTAAIEYAINVLHIKNIIVCGHSN
                     CGGCAALYDSDEQLSKVPIVKRWLMLISDIKEEVLKYKTLSPAKRAWITERLNIINST
                     QNLLTFPGAKEKIENAEIKIYGWHYIIETGEVYNYDEPTKTFKLLEKSIDYDKIFNQI
                     FTDF"
     gene            2761..4635
                     /locus_tag="RPW04_000809"
     CDS             2761..4635
                     /locus_tag="RPW04_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HDX6294913.1"
                     /translation="MIKFLIKFLLIFSIGLQANESLTSITDEIFTINHQILIIDEQSK
                     DKNASLGHDLDSLKSKKAALLEQIPLFITSYDSANLNKIKRERLNLQKKAELLSDNQV
                     SDKFIRAKLNAENANLDEIFYSAISNLANAFLKDAKQDDINSILENTITNVQVSGYQD
                     IKALKDSLSDELKAEFNDNFINLEIKRHSYQEILDYLKSHSDLLAGNFLFSSLKLKDV
                     INYINKLVPFDQDTFNFGKFFLILVIFVFFISIRRMLSKIVFSIFTAFLSKEKKIAHK
                     ELQEQFILVIKKPISVFLIAYSVDICLSIFYYPSPVPINFANYFTIIYIVLISWLVLG
                     ILDGYGMVILSKIAQKSGRKEVVNLIIKILYFIVVIITILLILSRLGFDISTLIASLG
                     IGGLAVALATKDIIANFFASIMLLFDNSFSQGDWIVCAGVEGTVVEIGLRKTTVRTFD
                     NALVFVPNSKIMSENVKNWNRRKVGRQIKMTVGLSYSCSKKSIEACINDIRTMLLNHP
                     GIAKSGVDSALNSKDFRMKYRQNMISVDDLAGYKSNLFVVLDEFADSSINILIYCFSK
                     TVVWGEFLATKQDVMLKIMDIVEKYDDASFAFPSNSIYIEQMPKIEFENLNLKGDKNA
                     "
     gene            4628..4801
                     /locus_tag="RPW04_000810"
     CDS             4628..4801
                     /locus_tag="RPW04_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294914.1"
                     /translation="MREDFEELDEELDDDMEEQDLDKNFEDEFNDDKKDSYNYDENDY
                     SYDDEDEEESYEY"
     gene            4801..6177
                     /locus_tag="RPW04_000811"
     CDS             4801..6177
                     /locus_tag="RPW04_000811"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294915.1"
                     /translation="MHYFIYPNGGHSLMLAHNLEILGHTYEFLDDFKAGLKIEENSDK
                     INTIGGGLALIACDTTHPKNLILKKQLIKKVKSLNLIPVDGFKWIMSEILSYLKIEPH
                     KTAALLHSGMSDGKHLGDIIKYLQNSKTCFVEIFTDYFNYQIRKSSQSSDDKILLIPF
                     EYLKFLNFKVVAATGNFEKFNKKLMVHPKSIKIMIPHGYTTPLALLSYYARKDIHIEE
                     EIKEYQNMAIDYFIVPSRTNYKLFLDMGIDKNKLVPLGYPSLDLNLKNHKDLKAQKSI
                     LIALYSTKSVDSIVPALRDLLKNGYKVIFRPKPGQEELDCNQNILKEFSTNELFKFDT
                     NTRKTSHAKIDDELISEICCCVSDYSSLAFTLPLTNLRPCILYYPEHVFGKNFGKHRI
                     NKVDYSLANSDLHIVAKNSNDIIKAIKNLNLDEFKTKIKSYRDNEVYNLRSSSEAIAN
                     FISEKLNS"
     gene            complement(6206..7276)
                     /gene="aroC"
                     /locus_tag="RPW04_000812"
     CDS             complement(6206..7276)
                     /gene="aroC"
                     /locus_tag="RPW04_000812"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDX6294916.1"
                     /translation="MNTFGSKLRLTTFGESHGKAIGGVLDGFPAGVAIDEEFLQSEMD
                     KRKPGGKYATSRKEADEVEILSGIFEGFSTGTPIGFIIKNSNQHSKDYDSIKDLFRPG
                     HADFTYFSKFGVRDHRGGGRSSARETAVRVAAGAFGAMMLKEFDIDIKSGVFSIGKLK
                     SNKIDFEFASKSEIFMLDSDIEEDAKNLILDVKNSNDSVGAATLTIINGVPAGLGEVL
                     YDKLDARLAAAMMGINGVKGVEIGLGSQASFILGSQNNDFMDKNGFMSNNAGGILGGI
                     SNGEPIMIKTYFKPTPSIFKDQPTINLNGDEVTCALRGRHDPCIGIRGSVVANAMARL
                     VISDMLLLNASSKLSNLKKIYS"
     gene            complement(7273..7944)
                     /locus_tag="RPW04_000813"
     CDS             complement(7273..7944)
                     /locus_tag="RPW04_000813"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010400315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDX6294917.1"
                     /translation="MDKLNRLEEHLGYKFKNKTLLKEALTHKSMKSSVNNERLEFLGD
                     AVLDLIVGEYLFFKFKDTDEGNLSKLRAALVNEKSFASISSQIRLGDFLYLSAAEDNN
                     NGRNKPSLVSDALEALMGAIYLESGLEAVKKIFINLLESQYNNIDLQSLGKDYKTTLQ
                     EITQARFGVTPRYELVSSSGPDHKKSFEMAVFLNDKELARAIGNSKKEAEQSAAWKVL
                     QGMNI"
     gene            complement(7937..8362)
                     /gene="rnhA"
                     /locus_tag="RPW04_000814"
     CDS             complement(7937..8362)
                     /gene="rnhA"
                     /locus_tag="RPW04_000814"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HDX6294918.1"
                     /translation="MKKICLFSDGSCLNNPGAGGWAYILEYEGYKKSSSGGAAYTTNN
                     KMEIQAVIEGLKALKEPCEVSLYTDSSYVANAINIWLDSWIKKKFKNVKNVELWQELL
                     ELLNIHKVSANWVKAHNGHPQNEECDKLARNQAIKAQNG"
     gene            complement(8340..9350)
                     /locus_tag="RPW04_000815"
     CDS             complement(8340..9350)
                     /locus_tag="RPW04_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018137228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDX6294919.1"
                     /translation="MDFFFVEYRDPIFGLIVFFGALLLIAVLSYVWGIFSIKDEKHSI
                     EKFVKKFENSSGLSEKHKKMLLELDVDTNSLSVLALTFAKSGDFDKAISVYLVAIDKS
                     PGKKQREFLLVALGKIYLKAGFLKKASEVFLESLKLSPRNSEALRYLGVTYEKLRMYE
                     NSLETLDALNEQGADTKAEVAYIKALIITSKTSKFSEKVAQILSLSEDFPLLKRMVLE
                     QFIKHNEPLDGLSMLRLDECIDIVFRLDNLLNLENTEFKELLGAKGLSDDKPKDFNLA
                     LLKAANDNFLGATLSFSYFCTECKTSYPLFFYRCPNCARLGSVKILTHVIKDTSEEDM
                     PF"
     gene            9412..11052
                     /locus_tag="RPW04_000816"
     CDS             9412..11052
                     /locus_tag="RPW04_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDX6294920.1"
                     /translation="MIEASSIENLKNIVDIADVVGSYLPLKRSGSDFVCVCPFHNDKN
                     PSMRVSPSKGIFHCFSCKAGGDSIKFIMDYEKLSYPEAIEKLANMYNFTLNYTDNKNE
                     HHYDKKILENLNLYYKSMLYKNREAINYLYSRGINDAMIEKWELGWAGASQATINLLE
                     NEEIEPKEALYVGAVKQNETGLYASFINRITFPIYNHLGKLVGFGGRTISNNPAKYVN
                     SPQSAIFDKSKLLYGYDKAKNQIFKKGEIIICEGYMDCIMLHLAGISNAVAVLGTALT
                     EKHIPLLKRSDIKVILSFDNDEAGVNAAFKSAKLLASSECDGRVVLISGGKDPAELVA
                     SGRANELRNSLEGGVELGEFYIRHLIKSSNPKTPLEVAKTLESVQEFTKGLKEIVANS
                     YVPLVSSLLSLAPNSFSLCGNGFRYSPKKQMAKETKSAKKDLLELEILKNMLLNKDYL
                     EVVKSDCGSDMFVTHNEIYKAVTISQNPNNPHIRELSLNDNFELYDSLDRLKKALNIL
                     KINFCDKTIVLLASSNDKSKFEKIAQLQNIKKQLKGIQ"
     gene            11049..12044
                     /locus_tag="RPW04_000817"
     CDS             11049..12044
                     /locus_tag="RPW04_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDX6294921.1"
                     /translation="MNKKCLALFSGGLDSMLAIKLISSQGIEVHALNIDIGFGGNPDK
                     AELMSRRAKMAGATFEVINARSKYLQEVLFNPKFGYGKQFNPCIDCHGFMFRTAISML
                     EDYGASFVISGEVVGQRPMSQRNDAMVHVKNLALDDNDIILRPLCAKLLKPTRPEREG
                     LVDRELLLDFNGRGRSRQLELAHKFGFSDFETPGGGGGCLYTMEGFSNRIRDFIKFDK
                     NMSEDDLQSLRYGRHLRLLGGAKMIIGRDEKDNAYLEALNLKKMESIKFDDIIGAHSF
                     ISKNASKEDLEFGARLAITYCKSEKDKIYRAKIGDKTLDVSPFDNKNIAQTYFIK"
     gene            12058..12945
                     /locus_tag="RPW04_000818"
     CDS             12058..12945
                     /locus_tag="RPW04_000818"
                     /inference="COORDINATES: protein motif:HMM:NF024584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM/SPASM domain-containing protein"
                     /protein_id="HDX6294922.1"
                     /translation="MFKKVYIEISDICSCKCSFCPSPLMKTRRKTMSLELFEKVLYQV
                     SPLTKRICLHILGDPLEVSNLKEYINLVSKFNLKIDLVTTGKMICDHDFDMLLKPPFH
                     QISFSLSAFLDENNHFKDDYIANLLEFCDFSLANRSDTFINLRIQSDFLLSDNEKMIQ
                     VLDKFEKHFDINLSEHLKHIKLNFAQKIYEKNVKIRLARKVLLNFKTSFEWRNDNLIN
                     STKTCYALKDQLGILSDGMVVPCCIDYAGAINLGNIKSESLAQILRSQRVKNIKNGFK
                     QGKIVENYCQKCAYLVGVS"
     gene            13000..13698
                     /locus_tag="RPW04_000819"
     CDS             13000..13698
                     /locus_tag="RPW04_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HDX6294923.1"
                     /translation="MQIDKHNLIFLPASIVIAAVILAIGFSTIVKSERSVSVRGLAEK
                     EVLADLAVWQMSFSVGDNDLVELQKKVLEKTKIAENFLNKRGLNASDYTIQAPSITDN
                     SINPYMDSQKIRYTYIAKATLLIRTNKISEIKQAQRESLELASDNIAISQDYENRIAF
                     EFTKLNDIKPQMIAEATKNAKLAAEQFATLSGSEVGKIKKATQGLFSIENAAVGLEEK
                     KNIRVVTQVEYLLK"
     gene            complement(14090..15397)
                     /locus_tag="RPW04_000820"
     CDS             complement(14090..15397)
                     /locus_tag="RPW04_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HDX6294924.1"
                     /translation="MLLTNPVVLSVLLMCVLCLLRFNVFLAILISALAAGMLAGKGLV
                     ETTNLLITGMQGNLETALSYILLGALAAAISMTNLTPILIHYVSKFISKKVFWFSLSI
                     AFIACFSQNLIPVHIAFIPILIPPLLALMNKLKIDRRAVACALTFGLKAPYVSISVGF
                     GLLFHTILKKELNSNGMNVEIGDISSVMWIGGVAMLIGLVLALFYYRKPRDYTQSALE
                     SKEIKVADKKDLCMGQKECVVLGGAVIAFGVQIWSSSLPLGALLGLIVMIIFGGIEYK
                     KMDKVMEQGLAMMAFIAFIMLVAAGFGSVIRETGGINELINFASSISGGKLGGAIIML
                     VIGLLVTMGIGTSFGTIPIIAAIYVPLCVSLGFSVSATILLVGIAAAVGDAGSPASDS
                     TLGPTSGLNSDGKHSHIYDTCVPTFIFFNIPLIVFGVIFSLFI"
     gene            complement(15482..16528)
                     /locus_tag="RPW04_000821"
     CDS             complement(15482..16528)
                     /locus_tag="RPW04_000821"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294925.1"
                     /translation="MKYYRNFLLKLAAFIVGVCVLYVLFFIALGKIGSLDSRSVKNFL
                     LTHTINENRIIVESGSNSFHGINAKMIEDHFGKLTLNLGDYAGYPLKIRLYRTYKFAH
                     KGDVVIYPLEYRYYMNDVAPTVFYKHLLSEIYFYFDNLPFNEKLKVMLQTPASYVFIT
                     GVKKAASNLKKLFRDKLPKEFDLKATLKEHRGDYLYKGQLPQKDDMKVPCDEYIFTKE
                     ITGGRAAISEAFKENIKLMKKIEKEKGVKFIFTYPTVIGESCYDFSGEKGVEFKKFLV
                     ELKNYITSNGFEFIGDFNDSYLPDRKYMLDTWFHANPDGRDIRTKKLIENLDKSNFKN
                     DLYADSLSNSSISN"
     gene            complement(16537..17982)
                     /locus_tag="RPW04_000822"
     CDS             complement(16537..17982)
                     /locus_tag="RPW04_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HDX6294926.1"
                     /translation="MLFNSFEFIFVFLPITFFLYFLLSKFRLMKASIFILTAASLVFY
                     GYWNFIYVPLILMSITFNFFTGNHLCKEFKFKKIFLWFSILCNLALLGYYKYTDFFIE
                     NFNGMFSSNIPLHHIILPLGISFFTFTQIAFLVDCFSGKVKETNYLKYALFVTYFPHL
                     LAGPIIHHAEMMPQFANLRRKKIHYKNIGIGIFLFAIGLFKKVVIADFFAKFANYGFD
                     SVAMLSMSEAWITSLSYTFQLYFDFSGYTDMAIGISYMFNIVLPLNFNSPYKSLSIQE
                     FWRRWHMTLSRFLRDYIYIPLGGNRLGESRAYINIFIVFLLGGLWHGAGWTFIIWGAL
                     HGTALMIHRFYSSHFKPLHRILAWIITFNFINITWVFFRAKDMESAFKVLKGMFNINS
                     IAPNSGFIIVINEAFGFMENVTHKIAASLSIFIVTALAFVICVLFKNSNEMVANSKFG
                     YKTAIFVVFLFVCAFFATRSVQESQFLYFNF"
     gene            18119..19792
                     /gene="ilvD"
                     /locus_tag="RPW04_000823"
     CDS             18119..19792
                     /gene="ilvD"
                     /locus_tag="RPW04_000823"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDX6294927.1"
                     /translation="MRSDIIKDGYTRTPHRSLLRATGLKDDDFKKPFIGVANSFIEII
                     PGHFFLNKYSEILKDEIRKNGCVPFEFNTIGVDDGIAMGHEGMLYSLPSREIIANSVE
                     TVMNAHALDALVCIPNCDKIVPGMLMGALRVNVPTIFVSGGPMAAGVGAKGEALDLNS
                     AFEAVGAYETKQIDEKELKFIECNACPSGGSCSGMFTANSMNTLCEAMGVALEGNGTV
                     LALTSEREELIRKAARRICEIALDERYQIRNIINEKTIKNAMVVDMAMGGSSNTILHM
                     LAISREAGYPLDIASLNDISRSVPHITKIAPSLPSVHMQDVAKAGGLSAVINEIAKFN
                     SDLLSLDALTVSGESLGDRVKNAEILDESVIHTVQNAYSKVGGLAILFGNLAEQGCVI
                     KAAGIIGSRQFSGKAVCFNSQDEAIKGISKGKVQKGDVVVLRYEGPKGGPGMQEMLSP
                     TSLIVGRGLGADVALITDGRFSGATRGLSIGHVSPEAAEGGMIGLLKDGDIIDIDVDK
                     FSINVRLSDTEIEARRKEWKYAGKPVNSRWLRQYQKLVTNASNGAILEA"
BASE COUNT         7250 a         3444 c         3321 g         5951 t
ORIGIN      
        1 aggctataga aaacaaaaaa attatcatag aaaaatacca aactctaaaa tcaatatcaa
       61 gcaatgatct tgtatacata agtcaaaata tacaatacgc atcaaattta aagtttgtaa
      121 gcaaactata ctcgtatata attcttagca agttaggaac agagtttaac gcaactatgt
      181 tcaatcacga tataaatatg caattaaaca atataggaga tactaaaagt tttgattatt
      241 ctcttttaag cgccattaaa gatgtaggaa atagtatttt agcgctttca aatttatcgt
      301 acgataatat aaatttaaaa accacgcaaa aaatagacgc ctttttaaat gctataaata
      361 atcatttcaa atcaaacatc aatgatctta tgataagcgt agtcgtactt ttgtttatta
      421 ttatattatc atctactaga aatatctata caagcgtaaa aaatagaaaa aatgcagcca
      481 aaataaacca gatgggagat atgatagcaa atagtccaaa tcaaatttta atcataaatc
      541 gagaaggcaa aatcatagat gcaaatcctg cttttgaaca gataagtgga tataaaaaat
      601 cagaagtttt aaataaaact ttaagcttct taaatacaaa tttaaaaggt acaaatatct
      661 atgacgatat actccaaagt aagcaaatct gcagatataa cgagtttata agcaagtcaa
      721 aaaaaggact tttgatatat gaaaaaatca tagctatacc gactttagac gagtattcac
      781 aaatatctgg agctatcata gtcaaacaag atatcacaaa agaaagactt atagcaaaag
      841 agcttggatt taaaactgca gagataagaa acagcgctct aacagataaa ctaacaggtt
      901 taggaaatca catagcgctt atggaaaaaa tagatgataa gaaaaaaggt atcgtcatct
      961 atataaatgt aaatcacttt tcaaatttaa gattttttta taaaacatcg actgtggatc
     1021 ttatattaac tgcgatatca gaaacgctta aactatgcat agaaacatat aaaatgaact
     1081 caagcatata cagaatacaa ctagatgagt tttgtatatg gtatgaagga agcaatataa
     1141 ataaagatgt aaaacatatc ttagagtatt ttaaggtaaa aaatatagac ataataacaa
     1201 gcgaaggcag agaaatatta ccaaatataa atatcacaat gggcgttagc atggaggcag
     1261 acactccaaa tacaaaccgc ctcactcagt ctatcttagc tcaccatgaa gcgatatcga
     1321 acgaccaaaa tatagcattt tatcaagata acaacataat agaacaacaa tatcataaaa
     1381 accagctaat ctcaagaatg atacaatacg cactaaatga aaatagagtt atagtcgagt
     1441 gtcaaggcat atttgatatt agatcaagca ataaacctat attgtcgtca tatgaaattc
     1501 taatacgcat catagattcc gaaaataaaa tacactatcc cggagagttc ttaggagtag
     1561 caaaacaaac atcgctttat atagcactca caaaacaagt tataagcaaa gcttttgatc
     1621 tattagaaac attttgcgat aaaaagtttt ctataaattt atcaagcata gacatggtaa
     1681 acgaatctgt taaaaagcta tttatgcaaa aactttctct ttgctcacag cctagccacc
     1741 ttactgtaga aatattagaa agtgaaggta tagacgacta tgcatcgata aatccattta
     1801 tagaaagcat aaaagatcac ggatgtaaac tctctataga tgattttgga agcggatact
     1861 caaactacta tagaatgctt gagcttgaca tcgattactt aaaaatagac ggttcgatca
     1921 tcaaaaaact tccgtttgac gaaaatgcaa gaagcgtcgt acaaactata gtagagtttg
     1981 caaatagaca aaaatacgat gttgtagccg agttcgtatc atctaatgaa attttagaac
     2041 aagtacttag ctacggtata aaatacgctc aaggcttttt acttggcaaa cctattcatc
     2101 ctagtaatat agattagcaa ggagttttcg tgcatgatgt tataaatggt gcagttaaat
     2161 ttatggaaga agatttctta gagcataaag agttatttga aaaattaggt acaaaacaaa
     2221 cacctcacac tctgtttatc ggatgttctg actcaagagt tgttccgaat ttgataacaa
     2281 atacgcttcc gggcgaactt tttgtagtaa gaaatatagg aaatatcgta ccgcactaca
     2341 gagtaagtga agagttctta gcaactaccg cagcaataga atacgctata aatgttttac
     2401 atataaaaaa tataatcgta tgcggacata gcaactgcgg aggctgtgcg gctttgtacg
     2461 atagcgatga gcaattaagc aaagttccta tcgtaaaaag atggctgatg ttgatatcgg
     2521 atataaaaga agaggtttta aaatacaaaa ctctaagtcc tgctaaaaga gcatggataa
     2581 cagagaggtt aaatatcata aactccactc aaaatctatt aacttttcct ggagctaagg
     2641 aaaaaataga aaacgcagag atcaaaattt acggttggca ctacatcata gaaacaggag
     2701 aagtttataa ttatgatgaa cctacaaaaa catttaaatt acttgaaaag agcatagact
     2761 atgataaaat ttttaatcaa atttttactg atttttagta ttggcttaca ggcaaacgag
     2821 tcgttaacta gtataacaga tgaaatattc acgataaatc atcaaatttt aatcatagac
     2881 gagcagagca aagataaaaa tgctagttta ggacatgatc ttgactcgtt aaaatcaaaa
     2941 aaagctgcac ttcttgagca aattcctctt tttataacaa gttatgatag tgcaaattta
     3001 aataaaatca aacgagaaag actaaattta caaaaaaagg ctgaactttt atcggataat
     3061 caagtttctg ataaatttat aagagcaaaa ctaaatgctg aaaacgcgaa tttagacgag
     3121 atattttata gcgcgatatc taacttggca aacgcgtttc taaaagatgc aaaacaagat
     3181 gatataaact ctatactaga aaataccata acaaatgttc aagtatcggg atatcaagat
     3241 ataaaagctc taaaagactc gcttagcgac gaattaaaag ctgaatttaa cgataatttt
     3301 ataaatttag agatcaaaag acatagctat caagagattt tggactattt aaaaagccat
     3361 tcagacttat tagcaggcaa ctttttgttt tcgagtttaa aattaaaaga tgtgataaac
     3421 tacataaata aacttgttcc gtttgatcaa gacacgttta atttcggtaa attttttctt
     3481 attttagtta tttttgtatt tttcatatct atacgaagaa tgctttcaaa gattgtattt
     3541 agcatattta cggcattttt atcaaaagaa aagaaaatag cccacaaaga gctacaagag
     3601 cagtttatac tagttatcaa aaaaccgatt tccgtctttt taatagcgta ttctgtagat
     3661 atatgcctta gtatatttta ctacccgagt ccagttccta taaattttgc aaactatttt
     3721 actataatct atatagttct tatatcatgg ctagttcttg gtatattaga tggatacgga
     3781 atggttattt taagcaaaat tgctcaaaaa agtggtagaa aagaggtagt aaatcttatt
     3841 ataaagatct tatattttat agtagttata atcacgattt tactgatttt aagtaggctt
     3901 ggatttgata taagtaccct tatagcgtct cttggcatag gaggacttgc agtagctctt
     3961 gctacaaaag atataatagc aaactttttt gcttccatta tgcttttgtt tgacaactca
     4021 ttttctcaag gagattggat agtttgcgca ggagtcgagg gaactgtagt agagatagga
     4081 cttagaaaaa ctactgttag aacatttgat aatgctttag tatttgtgcc aaactcaaaa
     4141 ataatgagcg aaaacgtaaa aaactggaat agaagaaaag tcggcagaca gattaaaatg
     4201 actgtaggtc ttagctattc ttgttcaaaa aagagtatag aagcttgcat aaacgatata
     4261 agaacaatgc tgctaaacca tccagggatt gctaaaagcg gagtagatag cgcgctaaac
     4321 tctaaagatt ttagaatgaa atatcgccaa aatatgatct cggtagatga tttagccgga
     4381 tataaaagca acctttttgt agtgcttgac gaatttgcag atagctctat aaatatactg
     4441 atttactgct tcagcaaaac ggtggtatgg ggagaatttt tagctacaaa acaagatgtt
     4501 atgttaaaga ttatggatat agtagaaaaa tacgatgatg ctagttttgc atttccgtca
     4561 aatagcatat acatagagca gatgccaaaa attgaatttg aaaacttaaa tttgaaaggg
     4621 gataaaaatg cgtgaagatt ttgaagaatt agatgaagaa ttagatgatg atatggaaga
     4681 gcaagatctt gataagaact ttgaagatga atttaacgac gataaaaaag atagttataa
     4741 ttatgatgaa aacgactact cttacgatga tgaagatgaa gaagagagct acgagtatta
     4801 atgcattatt tcatatatcc aaacggcggg cattcgctta tgctcgccca taatttagaa
     4861 attttaggtc atacgtacga attcttagat gacttcaaag caggacttaa aatagaagaa
     4921 aactcagaca aaataaatac catagggggg gggttggcat taatagcttg tgacacgact
     4981 catccaaaaa atctaatttt aaaaaaacag ctgatcaaaa aagttaaaag tttaaatttg
     5041 ataccggtgg atggatttaa atggataatg agcgaaatcc taagctatct aaaaatagaa
     5101 cctcataaaa ctgcggctct gcttcattct ggtatgagcg acggaaagca tcttggcgat
     5161 atcataaaat atctgcaaaa tagcaaaact tgctttgtag agatatttac agattatttc
     5221 aattaccaaa tacgaaaatc atctcaaagc agtgatgaca aaatactgct tatccctttt
     5281 gaatatctta aatttttgaa tttcaaagta gtagcggcaa cgggtaattt tgagaaattt
     5341 aataaaaaac ttatggtaca tccaaaatct ataaaaatta tgattccgca tggatatacg
     5401 actccgcttg cacttttaag ctactacgca agaaaagata ttcacataga agaagagata
     5461 aaagagtatc aaaatatggc catagactac ttcatagttc ctagtcgtac aaattataaa
     5521 ctgtttttag atatgggtat agataaaaat aaacttgtac cgcttggtta cccgagtttg
     5581 gatttaaatt taaaaaatca caaagatctc aaagcgcaaa aatcgattct tatagcttta
     5641 tatagcacaa aaagcgtaga tagtatcgtg cctgctttaa gagatctact aaaaaacggc
     5701 tataaagtta tatttagacc aaaaccagga caagaggaat tagactgcaa tcaaaatatt
     5761 ttaaaagagt ttagtacaaa tgaacttttt aaatttgata caaacacgag aaaaacatct
     5821 catgctaaga tagacgatga acttataagt gaaatttgct gctgcgtaag cgactactca
     5881 agccttgctt ttacgctacc gcttacaaat cttagaccat gtattttgta ttaccctgaa
     5941 catgtatttg gtaaaaactt tggaaaacat cgtataaata aagtagatta ttcacttgca
     6001 aatagcgact tgcacatagt agcaaaaaac tctaacgata taataaaagc tataaaaaat
     6061 ttaaatttag atgagtttaa aaccaaaata aaaagctata gagacaatga ggtttataat
     6121 ttaagaagct ctagcgaggc tatagcaaat tttataagcg agaagctaaa ctcctaaacg
     6181 gattttagct tatttgagat aaattttaag agtagatttt ttttaaattt gaaagctttg
     6241 agctagcatt taaaagaagc atatcagata taactagtct tgccatagca ttagcaacta
     6301 cgctgcctct tatgcctata caaggatcat gacgacctct taaagcgcaa gtcacctcat
     6361 cgccgtttaa atttatggta ggctgatctt taaatatact tggagtcggc ttaaaataag
     6421 tttttatcat tataggctca ccgtttgaga ttccgcctaa gattccgcct gcgttattgc
     6481 tcataaatcc gtttttatcc ataaaatcat tattttgact tcctaaaata aaactagctt
     6541 ggcttcctaa acctatctct actcctttta ctccatttat acccatcata gcagccgcga
     6601 gtctagcatc aagcttatca taaagcacct ctcctagccc agcaggaacg ccatttataa
     6661 tagtaagagt agcagctcct acgctatcgt tgctattttt tacatctagt ataagatttt
     6721 ttgcgtcctc ttctatatcg ctatcaagca taaaaatctc acttttactg gcaaattcaa
     6781 aatcaatttt atttgatttg agttttccta tactaaaaac tccactttta atatctatat
     6841 caaactcttt taacatcata gctccaaaag ctcctgcggc tactcgaacg gcagtttctc
     6901 tagcgctact tctgcctccg cctctatgat ctcgcactcc aaatttagaa aaatacgtaa
     6961 aatccgcgtg tcctggtctg aaaagatctt ttatactatc ataatctttt gagtgctgat
     7021 ttgagttttt tattataaat cctataggtg ttcctgtact aaatccttca aaaataccgc
     7081 tcaatatctc tacttcatcg gcttcttttc tacttgtagc gtactttccg cccggttttc
     7141 ttttatccat ctcgctttgc aaaaactctt catctatagc tactccggca ggaaatccat
     7201 ccaaaactcc tccgatagct tttccgtgac tctccccaaa tgtagttagt ctaagcttgc
     7261 ttccaaacgt attcatatat tcattccttg caaaactttc cacgcagcac tctgttcagc
     7321 ctcttttttg ctatttccaa tagcgcgagc aagctccttg tcgtttaaaa aaacagccat
     7381 ttcaaaactt tttttatgat ccggtccgct tgaacttaca agctcgtacc taggcgtaac
     7441 gccgaacctc gcttgagtaa tctcttgtaa agtcgtttta tagtctttcc caaggctttg
     7501 taagtctata ttattatact gagattctaa aagatttata aaaatttttt tgaccgcttc
     7561 taaaccgctt tctaaatata tagctcccat aagtgcttct aaagcatcgc taactaagct
     7621 tggcttattt cttccgttat tattatcctc ggcagcagac agatacaaaa aatctcctaa
     7681 tcttatctgc gaacttatac ttgcaaaact cttttcattt accaaagccg ctcttagctt
     7741 tgagagattt ccctcatccg tatctttaaa tttaaaaaat agatactctc ctactataag
     7801 atccaaaaca gcatctccta aaaactcgag ccgctcatta tttacgctac ttttcatact
     7861 cttatgagtt agcgcctctt ttagcaacgt tttattttta aatttataac ctaaatgctc
     7921 ttctaatcta tttaatttat ccattttgtg cctttatcgc ttgatttctt gccaatttat
     7981 cgcactcttc attttgcgga tgaccgttat gtgcttttac ccagtttgca ctaactttgt
     8041 gaatatttag aagttctagc aactcctgcc atagttctac gttttttaca tttttaaatt
     8101 ttttcttaat ccaactatca agccatatat ttatagcgtt tgctacgtaa ctactatctg
     8161 tataaaggct tacttcgcac ggctctttta atgcttttaa accttctatc acggcttgta
     8221 tctccatttt gttatttgta gtataagcag ctccgccgct agaggatttt ttataccctt
     8281 catactcaag tatataagcc cagccgccgg ctcctggatt atttaaacaa cttccatcgc
     8341 taaaaaggca tatcttcttc actagtatcc tttataacgt gggttaaaat ttttacactt
     8401 cctaatctcg cgcagtttgg acagcggtag aaaaataacg gataacttgt tttgcactcg
     8461 gtacaaaaat aactaaaact aagagttgct ccaagaaaat tatcgtttgc ggcctttaaa
     8521 agagctaaat taaaatcttt tggcttatca tcagatagac ccttagcgcc taaaagctct
     8581 ttaaactccg tattttctaa atttaaaaga ttatcaagtc taaaaactat gtctatacac
     8641 tcatcaagac gcagcatact tagaccgtct aaaggctcat tatgctttat aaactgctct
     8701 aaaaccattc tttttaaaag tggaaaatct tcactaagac ttagaatttg agccactttt
     8761 tcactaaatt tactagtttt gctagttatg ataagagctt ttatataggc aacttctgct
     8821 tttgtatccg cgccttgttc atttaaagcg tctaaagttt caagactatt ttcatacatt
     8881 ctaagttttt catatgttac gccaagatat cttaaagctt cactatttct aggacttagt
     8941 ttgagagatt ctaaaaacac ttcactggct ttttttaaaa atccagcttt tagatatatt
     9001 tttcctaacg ctactaataa aaactcacgc tgctttttac cgggtgattt atcgatagca
     9061 accaaataca cgcttatagc cttatcaaaa tctccgcttt ttgcgaatgt aagggctaaa
     9121 acgctaagcg agtttgtatc aacatcaagt tcaagaagca tctttttgtg cttttcacta
     9181 agtccgctac tattttcaaa ttttttaaca aatttctcta tgctgtgttt ttcatctttg
     9241 atagaaaaaa taccccaaac atagctaagc acggctatta aaagaagcgc tccaaaaaat
     9301 acaataagcc caaaaatcgg atctctatac tctacaaaaa agaagtccaa atacaaacct
     9361 atatattaaa tttaatgacc attatagcaa attcaaggta taatctcgct tatgatagaa
     9421 gctagtagca ttgaaaattt aaaaaatatc gttgatatag cagacgttgt aggaagttat
     9481 ctgcctctta aacgttccgg aagcgacttt gtatgcgtat gcccgtttca taatgataaa
     9541 aatccgtcta tgagagtaag tcctagcaaa ggtatttttc actgtttttc atgcaaagcc
     9601 ggcggagata gtattaaatt tataatggat tatgaaaaac taagctatcc tgaagctata
     9661 gaaaaactag caaatatgta caacttcacg cttaattaca cagataacaa aaacgaacat
     9721 cactatgata aaaaaatatt agaaaattta aatttatatt ataaaagtat gctttataaa
     9781 aaccgtgaag ctataaacta tttatatagt cgcggtataa acgatgctat gatagaaaag
     9841 tgggagcttg gctgggctgg agcgtctcaa gcaactataa atttactaga aaatgaagag
     9901 atagaaccaa aagaagcgct gtacgtagga gcagtcaagc aaaacgaaac ggggctttat
     9961 gccagcttta taaaccgcat aacttttcct atttataatc atcttggaaa acttgtcgga
    10021 tttggcggtc gcacaatatc aaataatccg gcaaaatatg taaattcgcc tcaatctgct
    10081 atattcgata aatcaaaact gctttacgga tatgataaag ccaaaaatca gatatttaaa
    10141 aaaggcgaaa tcatcatttg cgaaggatat atggactgca taatgctgca tctagcagga
    10201 attagcaacg ctgtagccgt gcttggaact gcacttaccg aaaaacatat tcctcttttg
    10261 aagcgttctg atataaaagt tattttaagt tttgataacg atgaagccgg cgtaaatgct
    10321 gcatttaaaa gtgcaaaatt gttagctagc agcgagtgcg acggaagagt agttcttata
    10381 agcgggggga aagatccggc tgagcttgta gctagcggta gagcaaatga gttaagaaat
    10441 agtttagaag gtggggttga acttggagag ttttacataa gacatctcat aaaatcctca
    10501 aatccaaaaa ctcctcttga agttgctaaa actcttgaaa gcgtacagga attcacaaaa
    10561 ggactaaaag aaatagtggc aaactcatac gtgccgctgg tatcttcact tctgagttta
    10621 gctccaaata gctttagtct ttgtggcaat ggttttagat attcacccaa aaagcagatg
    10681 gcaaaagaga ccaaaagtgc aaaaaaagat cttttagagc ttgaaatttt aaaaaatatg
    10741 cttttaaata aagattattt agaggtagta aaatcagatt gcggaagcga tatgttcgta
    10801 actcacaatg aaatttataa agcagtaact atctctcaaa atccaaataa tccacacata
    10861 agagagctaa gcttaaatga taattttgaa ctttacgata gtttagatag actaaaaaaa
    10921 gcactaaata tactaaaaat caacttttgt gataaaacta tcgtcttgct tgctagctca
    10981 aacgacaaat ctaaatttga aaaaatagca caattacaaa atataaaaaa gcaattaaaa
    11041 ggaattcaat gaataaaaaa tgtctggcac tatttagcgg agggcttgat agtatgcttg
    11101 ctatcaaact tataagctca caaggtattg aagtgcatgc tttaaatatc gatatcggtt
    11161 ttggaggaaa cccggataaa gcagagctta tgagtcgtag agctaaaatg gctggagcta
    11221 cttttgaagt gataaatgca agaagcaaat atctgcaaga ggttcttttt aatcctaaat
    11281 tcggatatgg aaaacagttt aatccttgta ttgattgtca tggttttatg tttagaacag
    11341 ctatatctat gctagaggat tacggcgcga gctttgttat cagcggtgaa gtagtcggtc
    11401 agcgaccgat gagccaaaga aacgacgcta tggtgcatgt aaaaaatcta gccttagatg
    11461 acaatgatat aattttgcga ccgctttgcg cgaaactttt aaaacctacc cgtcctgagc
    11521 gcgagggttt agtagataga gagcttttac ttgattttaa cggacgcggc agaagcagac
    11581 aactagaact tgcacataaa ttcggcttta gtgattttga aactccgggg ggggggggag
    11641 gatgtctgta cacgatggaa ggattttcta atcgcattag agacttcatt aaatttgata
    11701 aaaatatgag tgaagacgat cttcaaagtc tgcgctacgg ccgccattta cgactgcttg
    11761 gaggagcaaa aatgataatc ggtcgagatg aaaaagacaa tgcttattta gaagctttga
    11821 atttaaaaaa gatggaaagt ataaaatttg atgatatcat cggcgctcat tcattcatca
    11881 gcaaaaacgc atcaaaagag gatttagagt ttggcgcacg tcttgccatc acttattgca
    11941 aaagcgaaaa agacaaaata tatagagcaa aaataggcga caaaacgctc gacgtatcac
    12001 cattcgataa caaaaatata gcacaaacgt attttataaa gtaaatttac taagtttatg
    12061 tttaaaaaag tatatattga aatcagcgat atctgctctt gtaaatgcag tttttgtcca
    12121 tctcctctta tgaaaacaag gcgtaaaaca atgagtcttg agctgtttga aaaagttttg
    12181 tatcaagtat cacctttaac taagagaatt tgtttgcata ttttagggga tcctttagaa
    12241 gtaagcaatt taaaagaata tataaattta gtatccaaat ttaacctaaa aatcgatcta
    12301 gttacgactg ggaaaatgat ttgcgatcat gattttgata tgcttttaaa acctcctttt
    12361 catcaaattt cattttcttt gagtgcgttt ttggatgaaa ataaccattt taaagatgat
    12421 tatatcgcta atttacttga attttgtgat tttagtttag caaataggag cgatactttt
    12481 ataaatttac gtattcaaag cgatttttta ttaagtgata atgaaaaaat gattcaagtt
    12541 ttagataaat ttgaaaaaca ttttgatata aatttaagcg agcatctaaa acatataaag
    12601 ctaaattttg ctcaaaaaat ttatgaaaaa aacgtaaaaa ttcggcttgc aagaaaggta
    12661 ttattaaatt ttaaaacctc ttttgaatgg agaaatgata atttaataaa cagcactaaa
    12721 acttgttatg cattaaaaga tcaacttgga attttgagcg atggaatggt tgtaccttgc
    12781 tgcatagatt acgcaggagc tataaattta ggtaatataa aaagcgaaag tttagctcaa
    12841 attttaagat cacagagagt aaaaaatatc aaaaacggat ttaagcaagg taaaattgtt
    12901 gaaaattatt gccaaaaatg cgcctactta gtcggagtca gctaagctag gaattataga
    12961 attttgatat aattatcgca tcaaatttaa aggcgaaata tgcaaatcga taaacataat
    13021 cttatatttt tacctgcttc gatagtcata gctgcagtga ttttggctat aggttttagc
    13081 actatcgtaa aaagcgaacg cagcgtaagc gtcaggggat tggcagaaaa agaagtgctt
    13141 gcggacttag cagtatggca aatgagtttt tcggtcggag ataatgacct agtagagctt
    13201 caaaagaaag tgttagaaaa aacgaaaata gccgaaaatt ttctaaataa acgaggttta
    13261 aatgctagtg attacactat tcaggcgcct tctattactg ataattctat aaatccttat
    13321 atggattctc aaaaaattcg ctacacatac atagccaaag ccaccttact gatacgcaca
    13381 aataaaatat ctgaaataaa acaagcacaa agagaatctt tggagctagc tagtgacaat
    13441 atcgccatca gtcaagacta tgaaaacaga attgcatttg aatttacaaa actaaatgat
    13501 atcaaaccgc aaatgatagc tgaagcgaca aaaaacgcta aactagcagc cgagcaattt
    13561 gcgactctct caggaagtga agtcggcaaa ataaaaaagg cgactcaagg gctttttagt
    13621 atcgaaaatg cggccgtagg attagaggag aagaaaaata tccgagttgt aactcaagtt
    13681 gagtatttgc taaaataaga gataatatta agagtaaatt aaactttact ctttttagat
    13741 atatgaagtt atttagtata gtaacgcaca ctgcaccagt gttgataatc gttttaactt
    13801 actttgcata aagcataaat ttatattcat ctttgtttta cactagccaa aactccagag
    13861 actatggcta gcataagcga gataagataa accctaatac ctcttcgcca aacatcaaaa
    13921 ccaccaaaaa tgccaacaaa gtgagtatgc ttgagtaaaa aagatactga taatctaagc
    13981 cagtccgggc aaatttatca aataccagta tcaaagacca aagcagtata caaaaagcta
    14041 agtaaatact agcttataag tttattcatt atctaaaatg attctaaatt tagataaata
    14101 gcgaaaatat cacgccaaat acgattagcg ggatattgaa aaatataaaa gtcggtacgc
    14161 aagtatcgta gatgtggcta tgcttgccgt cgctatttaa tcctgaagtc ggtcctaaag
    14221 tactatcact agcaggactt ccggcgtctc ccacggccgc ggcgataccg actaaaagta
    14281 tagtcgcaga aacgctaaat ccaaggctca cgcaaagtgg cacgtaaatc gcggctatga
    14341 taggaatagt tccaaaacta gttccgatac ccatagttac aagtagtccg ataactagca
    14401 taatgatagc tccgccaagc ttaccgccgc ttatagaact tgcaaaattt ataagctcat
    14461 ttataccgcc ggtttctctg ataacagaac caaatcccgc agctacaagc atgataaaag
    14521 cgataaaagc catcatagca agaccttgct ccataacttt atccatcttt ttatactcga
    14581 taccgccaaa gattatcata actataagcc ccaaaagagc tcctaaagga agagagctac
    14641 tccaaatttg gacaccaaaa gctatgacgg cgccgccaag cacgacacac tctttttgcc
    14701 ccatacaaag atctttttta tccgctactt ttatctcttt actttctaaa gcgctttgcg
    14761 tataatctct aggttttcta taataaaaca gcgccaaaac taaaccgatg agcatagcta
    14821 cgccgcctat ccacataacg ctacttatat cgcctatctc tacgttcata ccgttactat
    14881 ttaactcttt tttaagaatg gtatggaaca aaagaccaaa accgactgaa atgcttacat
    14941 aaggagcttt taatccaaaa gtaagtgcgc acgccacagc tcgtctgtct atcttaagct
    15001 tattcatcaa agcaagtaac ggtggtatca aaataggtat aaaagctata tgaacaggta
    15061 tgagattttg agaaaaacat gctataaaag ctatgctcaa agaaaaccaa aaaacctttt
    15121 tacttataaa tttactaacg taatgtatca aaataggagt taaattcgtc atactgatag
    15181 ccgccgcaag cgctccaaga agtatgtagc taagtgcggt ttctaagttg ccttgcattc
    15241 ctgttatgag taaattcgta gtctctacca aaccttttcc ggctagcatt ccagcagcta
    15301 aagccgagat aagtatggct aaaaaaacgt taaagcgcag taagcacaaa acgcacataa
    15361 gcaaaacgct aagcaccacg ggatttgtaa gcaacataat ctacctttga aatttaataa
    15421 gctagcatta tacaaacgta tagcttaaat ttagaaaata ttaatataat ataatttaat
    15481 tttaatttga aatagaacta tttgacaaac tatcagcgta taaatcattt ttaaaatttg
    15541 atttatctaa attttcaatc agctttttgg ttctaatgtc tctgccatca ggatttgcat
    15601 gaaaccatgt atctaacata tattttctat ctggcagata actatcgtta aaatcaccta
    15661 taaactcgaa gccgtttgaa gttatgtagt ttttcagctc tactaaaaac tttttgaact
    15721 cgactccctt ttcaccgcta aaatcataac aactctcacc tataacagta ggataagtaa
    15781 atataaactt tacgcctttt tctttttcta tctttttcat tagttttatg ttttctttaa
    15841 atgcttcact tatagctgcc ctaccaccag taatctcttt tgtaaatata tactcatcgc
    15901 aaggaacttt catatcatct ttttggggaa gctgaccttt atataagtaa tcccctctat
    15961 gctcttttaa agtagctttt aaatcaaact cttttggaag tttatctcta aaaagttttt
    16021 ttaaatttga cgctgctttt ttaactccgg ttataaacac gtaagaagct ggagtttgaa
    16081 gcatcacttt gagtttttca ttaaatggta aattatcaaa atagaagtaa atttcagata
    16141 aaagatgttt ataaaataca gtgggagcaa catcgttcat atagtacctg tactccaaag
    16201 gatatatcac aacatctcct ttatgtgcaa atttatatgt tctataaagt ctgattttga
    16261 gcggatatcc ggcgtaatct cctaaattta aagtaagttt gccaaaatga tcttctatca
    16321 ttttggcgtt gattccatga aatgaatttg acccgctttc tactataata cgattttcat
    16381 ttatggtatg agtaagaagg aaatttttta ctgaacgaga atctaaggag ccaattttac
    16441 ccaaagctat aaaaaatagc acgtataata cgcaaacacc gactataaaa gcagctaatt
    16501 ttaataaaaa atttctataa tatttcataa aattccctaa aaattaaaat ataaaaattg
    16561 tgattcttga acgcttctag tagcaaaaaa cgcacacaca aataaaaaca caacaaaaat
    16621 cgccgtctta tatccgaatt tagagtttgc gaccatctca tttgagtttt taaacaatac
    16681 gcaaattaca aaagctaaag cagtaactat aaagatacta aggctagcag ctattttatg
    16741 agtaacattt tccataaaac caaatgcttc atttatcaca attataaagc cgctatttgg
    16801 ggctatagag tttatattaa acattccttt taatacctta aaagcagact ccatatcttt
    16861 agctctaaaa aatacccatg taatatttat aaaattaaag gtgataatcc acgccaaaat
    16921 cctatgcaaa ggtttaaaat gagaactata aaaacgatga atcataagag ctgttccgtg
    16981 aagagctccc catataataa atgtccaacc ggcgccatgc cataatccac caagtaaaaa
    17041 tacgataaaa atatttatat acgccctgct ctctccaagc ctatttccac caagaggaat
    17101 ataaatataa tcgcgtaaaa accttgagag agtcatatgc catctacgcc aaaactcttg
    17161 aatactaagt gatttataag gagagttaaa atttagaggt aaaactatat taaacatata
    17221 tgagatacct attgccatat cagtatatcc gctaaaatca aaatatagct gaaaagtata
    17281 actcaaactt gttatccacg cttcactcat actaagcata gcaacactat caaatccata
    17341 atttgcaaat ttagcaaaaa aatcggctat cacgaccttt ttaaacaatc caatagcaaa
    17401 taaaaatata cctataccga tatttttata atgtattttt ttacgcctta aatttgcaaa
    17461 ttgcggcatc atttcagcgt gatgtatgat aggacctgct aaaagatgcg gaaaatacgt
    17521 tacaaataaa gcgtatttga gataattcgt ctctttaacc ttaccgctga aacaatccac
    17581 taaaaacgca atttgagtaa atgtaaaaaa gctgatacca agcggtaaaa tgatatgatg
    17641 taaaggaata ttcgagctaa acataccgtt aaaattttct ataaaaaagt ccgtatattt
    17701 gtaatatccg agcaaggcta gattacacaa tatactaaac cacaaaaata tctttttaaa
    17761 tttaaactct ttacaaagat gatttcctgt aaaaaagtta aatgtgatag acatcaaaat
    17821 aagcggcaca tagataaaat tccaatatcc ataaaaaacc aaagatgccg ctgttaatat
    17881 aaaaatgcta gccttcatca gcctaaattt agatagtaaa aaatataaaa aaaacgtgat
    17941 aggtaaaaat acaaatataa attcaaacga gttaaaaagc ataagtatcc ttgaaaaaca
    18001 acttaaatat ctatgatttt actttaaatt tatttaaagt tgaataaatt gtaattttta
    18061 aacattttaa actaaatttt gataaaatgg agcaaattta aaaataaagg caaaactcat
    18121 gcgaagtgat atcataaaag acggctacac aaggactccg catcgctcac ttctaagagc
    18181 gaccggactt aaagacgacg actttaaaaa accgtttatt ggcgtagcaa atagctttat
    18241 agagataatc cccggtcatt ttttcctaaa taaatactct gaaattttaa aagacgaaat
    18301 ccgcaaaaac ggctgcgtac cgtttgagtt caacactatc ggcgttgatg atggtatcgc
    18361 tatggggcac gagggtatgc tttattcact tccaagccgc gagatcatcg caaactctgt
    18421 tgaaacagtg atgaacgctc acgctcttga tgcgcttgtt tgcataccta actgcgacaa
    18481 gatcgtccct ggaatgctta tgggtgcact tagggtaaat gtgccaacta tattcgtaag
    18541 cggcggtcct atggctgctg gagtcggagc caaaggagaa gctttggatc taaactctgc
    18601 ttttgaagcg gtcggagctt atgaaacaaa acagatagac gaaaaagagc ttaaatttat
    18661 cgagtgcaac gcctgtccaa gtggcggaag ctgttcagga atgtttaccg caaactcgat
    18721 gaatacactt tgcgaagcta tgggcgtagc tctggaggga aacggtaccg tacttgcgct
    18781 tacctctgaa cgtgaagaac tcataagaaa agctgcacgt aggatctgcg agatcgcact
    18841 tgatgagcgc tatcagatca gaaatataat caatgaaaaa actatcaaaa acgctatggt
    18901 agtggatatg gcgatgggcg gaagctcaaa tactatactt catatgcttg ccatcagtcg
    18961 agaagccgga tatccgttag atatcgctag tctaaatgac ataagtcgct cggtaccgca
    19021 cataactaaa atagctccga gtctgcctag tgtgcatatg caagacgtcg ccaaagccgg
    19081 cggactaagc gcggttataa acgagatagc taaattcaat agtgatttat taagtttaga
    19141 cgctcttacc gtgagcggcg agagcttagg agatagagta aaaaatgctg aaattttaga
    19201 tgaaagcgtg atccataccg tgcaaaatgc ttactcaaaa gtgggcggac tagctatttt
    19261 atttggaaat ttagccgagc aaggatgcgt gataaaggcc gccggtatca tcggtagcag
    19321 acaatttagc ggaaaagcgg tctgctttaa ctctcaagat gaagctataa aaggcatatc
    19381 aaagggaaaa gtacaaaaag gcgacgtcgt agttttaaga tacgaaggac caaaaggagg
    19441 ccccggaatg caagaaatgt taagcccgac tagccttata gtaggacgtg gacttggagc
    19501 ggacgtagct cttataaccg atgggcgttt tagcggagcg actcgcggcc taagcatagg
    19561 gcacgtaagc cctgaagctg ctgagggcgg tatgataggt cttttaaaag acggtgacat
    19621 catagatatc gacgtagata aatttagcat aaacgtacgt ttaagcgaca ctgagataga
    19681 ggcgagacgc aaagagtgga aatacgctgg aaaaccagta aatagccgct ggttaagaca
    19741 ataccaaaaa ctagtcacaa acgcgagcaa tggcgcgatt ttggaagcat aaatttataa
    19801 aaggcggaaa aatcgccttt tatgctcatc ttaaaactta atctttaaaa atatataatc
    19861 aatttttcta tataaatctt aaaaaaatca aaatatcaat tttcaatatc cgtaaaatat
    19921 ataaataaga aaataaaaaa tatttacatt aataaagtat tcttat
//
LOCUS       DAPPKW010000025        19685 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.025, whole genome shotgun sequence.
ACCESSION   DAPPKW010000025 DAPPKW010000000
VERSION     DAPPKW010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19685)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19685)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19685
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.025"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            55..1419
                     /locus_tag="RPW04_000824"
     CDS             55..1419
                     /locus_tag="RPW04_000824"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294928.1"
                     /translation="MSKYLYGASIQGIQEFIFKTNKLAQIVGASEILKSIHDDFEQSY
                     RVNNHEIYLNAAGNIKIILSDKNALEKIVKEFPKKVMQKAYGISISQAVVEINNNNPT
                     TNELKLLDDKLKAGRNKAAIPLDIRFSIMDFVRNTARPSVPNEKKISNTEKIDKGSLQ
                     KYKKSDKNEISAIKNKKNKIAVIHADGNNLGDLIPNIKNISDFSKNLNKATKEAFDMA
                     TKTIKKDKFREIILGGDDMTIICDADFALDFTKIYLTKFEELTTKFTKYNLTACAGIA
                     FCNEKFPFHYAINLAESLCGVAKNHTKNPKPNEPSSCLMFHNVQSSNFQTWDKFVQDE
                     LSVKSQNISFDFGPYYLNKQNQPSIENLIEVCRNYADERSPISSLREWIRVLDNKSYA
                     EFMLDRINEMLDRSWADREFISKLFANLSNKHLITKKDGKNKTPIYDILQIHAVTQKI
                     KERL"
     gene            1416..1934
                     /locus_tag="RPW04_000825"
     CDS             1416..1934
                     /locus_tag="RPW04_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004318491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein"
                     /protein_id="HDX6294929.1"
                     /translation="MNLNYRLKFYDYWHLSSGLSGGAKFNSIVIKDSNGLPFAPGKTI
                     KGLLREMANLIDPNFTKICFGDKEHMGECYFSNATLEQQDTDYIIANSLQPYLYDIIA
                     QTSIDDNGNTKDDSLRVIEVVIPLELQGEIRDIPDEFEDKIRKSLRMIKQIGLNRNRG
                     LGRCEFCVEGQK"
     gene            1931..3286
                     /locus_tag="RPW04_000826"
     CDS             1931..3286
                     /locus_tag="RPW04_000826"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294930.1"
                     /translation="MKELFFEVKFLSDIVLPATSNTEGNINYLDFIPGSNFLGMVAQN
                     YDKFSDSFDLFYSGNICFNDAHMVYNGKITYKTPYSFYHKKLDNKIICNKHMISKEES
                     NKLGQLKQLRVGYITEDLEQVLISHSYSQKSSYDTQQRKSKDSAMFGYKSLPKGSIWR
                     FSVKLKNECKDENLIISTLQNSYKLGKSKSAQYGLIKISYLQDYKSNNIKTFNDYENY
                     DFLYANSRLVLIDDHGNPTYDLSFICKDIDICYEKTNIRNSSFTPYNGKKARFESERL
                     CINKGSVIAVKKLTPEQTSIIKNGVGAYKSEGFGDIIINPNFLKENEPKLKNTDKRDS
                     IKAKTEPKTSLTKFLKAKRESSDTNLKIANEVSKLINEKYCYFSSISSSQWGNIRQIC
                     DTSDDESLLANIENSIKNGIKKWSDEQAKQLINIIESIQKDKCKFIKLFAMKIRSKNG
                     N"
     gene            3276..4628
                     /locus_tag="RPW04_000827"
     CDS             3276..4628
                     /locus_tag="RPW04_000827"
                     /inference="COORDINATES: protein motif:HMM:NF015728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294931.1"
                     /translation="MATKRHVAHVTLEALTPLKVGSQSVDFLQDSPVQKDWNNLPMIL
                     GSSIAGVLRVKFQDKFKDKTDDIFGKENGSKIIISNALLLDKTAKVCETLLLEKDDFL
                     SLFENLPLREHTAINEKGLAIDRSKFNEEVVFKGSKFKFSIELVEDDKESFNDILSLL
                     IDDDFRLGGGSSKGFGEFEIKRIRYGYLDVSEYSSSLNFELKNVYSNKTQDLELKNVY
                     QKQSQTGQKLTKYELNITPDNFFMFGSGFGDSDADMTPVFEQTISYDTSSISNPKVLI
                     PASSIKGALLHRTLYHICKLEGITVDKSLEEALREAKKRKDIKDLKDLVVPLFGEAKN
                     TDKKGKKGNILMSDCFKANDAQTKIFDHVAIDRFTGGAMDGMLFQEKTIAKDKDSYLI
                     KISIKNEQNIGENLIKAFENALLDVTLGRLPLGGATTKGHGIFSGKVLKNGTELKESK
                     "
     gene            4625..5062
                     /locus_tag="RPW04_000828"
     CDS             4625..5062
                     /locus_tag="RPW04_000828"
                     /inference="COORDINATES: protein motif:HMM:TIGR04423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04423 family type III CRISPR-associated
                     protein"
                     /protein_id="HDX6294932.1"
                     /translation="MNEFKTQKDIQNYINSLKNCVGYLQISNEDLKEHKQDRIWKQKS
                     DINVDFSSIKGFIYEAHFFDETLNKSIAIRQINSTWLVDETNLSDKDIQSDDEQIYIS
                     DIDDLLVKTVQIWQERSDEFCLNLATLKLQKVVFAGFGHKEKK"
     gene            5059..6564
                     /locus_tag="RPW04_000829"
     CDS             5059..6564
                     /locus_tag="RPW04_000829"
                     /inference="COORDINATES: protein motif:HMM:TIGR03986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03986 family CRISPR-associated RAMP protein"
                     /protein_id="HDX6294933.1"
                     /translation="MITTLYNFVPLNEQIFYPDWADNVSHDIPFSDAQSGEIDITITA
                     KSPIFIKNHASKDNKEALEFCHHINENGEKEYYIPSSSVKGMIRNVLEIMSFGKIKID
                     SKFNGVLIVRDMTNNSLIGKANKCGFLVKIDGNTKLLDCGNIITISHKDLEKNYPELK
                     SLKTAKDKYTKYYLLNKVKFTTKKEKSRTVALLSNDNKNAQSGQLVFTGDIHHEFIFK
                     DSGKYIEVTDDANKKFLKVYNNNKSIDGKYIIKEFKEKIPVFFVEKGGKIEAIGITQL
                     FKLAYNKTIADAAKQTDYKEDKLDLSETIFGTVINSKKALKGRVYFSHFKAIPPYNFA
                     TKAEVILGTPNPNYIQQTKKANPYITLINEDAKISGWKRYPLHNELMKPSLPNDNQDV
                     RTTFTPLNQNTVFKGKLKFHNLRPVEIGALISAITFHNRSDVCMHNIGMAKALGYGKI
                     DIKLGLQNLKFDKKEYLKRFEELMTNFQLNWENSDQLTELFDMASTNTKNK"
     gene            complement(6894..6978)
                     /locus_tag="RPW04_000830"
     tRNA            complement(6894..6978)
                     /locus_tag="RPW04_000830"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6942..6944),aa:Leu,seq:tag)
     gene            complement(6989..7065)
                     /locus_tag="RPW04_000831"
     tRNA            complement(6989..7065)
                     /locus_tag="RPW04_000831"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7029..7031),aa:Arg,seq:tct)
     gene            complement(7120..7196)
                     /locus_tag="RPW04_000832"
     tRNA            complement(7120..7196)
                     /locus_tag="RPW04_000832"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7160..7162),aa:Arg,seq:tcg)
     gene            complement(7221..7297)
                     /locus_tag="RPW04_000833"
     tRNA            complement(7221..7297)
                     /locus_tag="RPW04_000833"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7261..7263),aa:His,seq:gtg)
     gene            complement(7302..7379)
                     /locus_tag="RPW04_000834"
     tRNA            complement(7302..7379)
                     /locus_tag="RPW04_000834"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7342..7344),aa:Pro,seq:tgg)
     gene            complement(7499..8218)
                     /locus_tag="RPW04_000835"
     CDS             complement(7499..8218)
                     /locus_tag="RPW04_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018137369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDX6294934.1"
                     /translation="MLEWIYSPEAWISLLTLTSLEIVLGIDNIIFIAILCGKLPAHQR
                     DRARVLGLGLAMVTRILLLLSLFWIMKLTTPLFSLFDYEISGRDLVLIAGGLFLIAKS
                     TLELHSHATGENEEDSLKAKGASNFFATIVQIGILDIVFSLDSVITAVGMADHIEIMI
                     IAVILAVLVMLLASGSISRFVDNNPTIKVLALAFLIMIGIALVGEGFKFHIPKGYIYF
                     AMAFSLAVEMINLYAKRKHSK"
     gene            complement(8211..8798)
                     /gene="purN"
                     /locus_tag="RPW04_000836"
     CDS             complement(8211..8798)
                     /gene="purN"
                     /locus_tag="RPW04_000836"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDX6294935.1"
                     /translation="MVVKNIAILFSGSGSNLEAILEKVHGKVFGDVKIVAKLLICNKT
                     DAYGIERAKKFGLETLIIDSSKFISREEFDAALVKEIEKNEIDLTVLAGFMRILTHVF
                     TSKIKAINLHPSILPLFKGAHAIKESFDSDMAVGGVSVHSVSEELDGGKIIAQETFQR
                     NSKTFEEWEETIHKIEHEILPKTIINILTNKENNA"
     gene            complement(8789..10174)
                     /locus_tag="RPW04_000837"
     CDS             complement(8789..10174)
                     /locus_tag="RPW04_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HDX6294936.1"
                     /translation="MKKLFISSDKFDKNCILNYGLNELILQENAALSVANLVRVNLKI
                     GSKILVVCGGGNNASDAIAAARMLEGDYECELFFTTSNLNENCKTQLKIAKQIGVKMC
                     ENLSLDRVDCVIDGIFGSGLNKNLDEKIVQMLNLINNTSSLKIAIDFPSGLEKNGRIL
                     GACFNADFTVTMGARKLGLYSDAAKDFVGEIVCSNLGICESKFSSSSSDFLLEFDDLR
                     LPSREILNTNKGDFGHAFVACGELSGAAKICAKAALKMGSGRVSVVNLNGQNINLDEE
                     IMQKNSFKGADAVAVGMGLGEAKFDINEILTRPCVVDADMFYKKEILSFTVKDDAILT
                     PHPKEFSSLLNIAGFGNFSIEDVQRSRFELSREFSKTFSCVLVLKGANAIIAKNGVLY
                     VSNLGTPSLAVAGSGDALCGILLGFLAQGFSPLDSAISGVLAHQKTAQNYKANDYSFT
                     PNDIIEGLKWL"
     gene            complement(10171..11685)
                     /locus_tag="RPW04_000838"
     CDS             complement(10171..11685)
                     /locus_tag="RPW04_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HDX6294937.1"
                     /translation="MKSLKSACLGSKLHIIDIESTFLRALPGFDIVGLASTTIKESVT
                     RVRSALGVIKDFNLPAMKIVINLSPSDVKKDGSHFDLPIALLILLQKEKFDSDFFVFG
                     ELSLDGSLKSSAELFSVLLFLSVKTKSANVLLPKDIALKAAMIPNLTVFTVSNLNEAR
                     DFFLNEEFKQSCKIVSSHPLFENVIEINDKKFVPNFNYELDFKDIKGQERAKRACIIS
                     AAGMHNILFEGSPGCGKSMSAKRLAYILPPQSLSEILLASAYQSLNSNNCDFSSLRAF
                     RSPHHTSTRSSIFGGGSGMAKIGEVALANGGVLFFDEFPHFGKQVLESLREPLEDNKI
                     NISRVNSKTSYETKFLFVAAMNPCPCGNAFSKFNNCRCSDKDIARYQSMISKALLDRI
                     DIYVAMGEINSEDKPSLSSEDMHRMVLEAFKKQIVRGQSELNGKLKDAEIAKFCQCDK
                     DAKITLNKAIVNYHLSQRGINKTLKVARTIADLDGKENISKVHMLESLSYRMKM"
     gene            complement(11682..12200)
                     /locus_tag="RPW04_000839"
     CDS             complement(11682..12200)
                     /locus_tag="RPW04_000839"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDX6294938.1"
                     /translation="MILDVITYPDKRLFEKSADVVKFDNELAKFLDDMYDTMIAKNGI
                     GLAAIQVGKPIRVFIINLINEDEVQDKNDLLEIINPKFISKDGEIVYQEGCLSVPGYY
                     EDVKRAKDIKIQFQDRFGNLKELEADGLLSVAIQHENDHLDGHLFIEKIGFNKRKKFD
                     KEYKKKSKLKPI"
     gene            complement(12201..13283)
                     /locus_tag="RPW04_000840"
     CDS             complement(12201..13283)
                     /locus_tag="RPW04_000840"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HDX6294939.1"
                     /translation="MVKLRDDKDVSPNIVQQNQITKSVAERSREEAVKVKNSDKNDEV
                     AVDLNKFSQTVLKQLSDDNIQATPENFDIYFRKLLESKSSSFQKKVLELIDYDKDDVL
                     EKQALIEKEIKLGFGQIKNMLQVITLIYKNLVIMKGIVKKRLEETKANANPLEVQAAI
                     KSFSDELDKLNTLMERHLDVIKNSYEDVNRIFKNVEEQSIYDSKFGVYNKKYFLKVLE
                     DEFDHVKRYNYNVSFMLIHVKDSVLNNIPSLKDKNGILRNIAKILLKTSRRSDVVAHY
                     GDGYFGMIMKHTDIEGAKKACDRVGQMLYQTTFFIAEDEIDMDIEISVAALNLKHIVE
                     ETLSKALDGLAKSGKRAKLYEVVEGN"
     gene            complement(13295..13885)
                     /gene="clpP"
                     /locus_tag="RPW04_000841"
     CDS             complement(13295..13885)
                     /gene="clpP"
                     /locus_tag="RPW04_000841"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HDX6294940.1"
                     /translation="MSYYIPYVVERTSKGERSYDIYSRLLKDRIIMLSGEIEDAMASA
                     IVAQMLFLEAEDPDKDIYLYINSPGGVVTSGFSIYDTMNYIKPDVCTICIGQAASMGA
                     FLLSCGTKGKRYALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKEVLNSTLAKNTG
                     QKLAKIAKDTDRDFFMSAHEAAEYGLIDNVLEKSFK"
     gene            complement(13885..15192)
                     /locus_tag="RPW04_000842"
     CDS             complement(13885..15192)
                     /locus_tag="RPW04_000842"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDX6294941.1"
                     /translation="MEVKAKLLNTANAAAQTEVKASELNAKVENLAKKAAKNIKIDGF
                     RKGKVPVAQVLKRYGKDLENDAKSEIFRDIVNESLKLIAKKSSDIIGEPMILKFDEKD
                     GNIDIELEISFKPEVKVDGYEEIIPEYTTPKVTKKEIEEKINEFLKMIAPLEKVEKES
                     LEKGDFAKFDFEGFVDGEAFEGGKAEGYLLEIGSGQFIPGFEDGMLGLKVGEQKDVNV
                     TFPAEYGAAHLAGKSAVFKVKLHEIQGKKAGKLDEETLKKLMPNEENPTAEQLEDRIK
                     EQIRADKFQKLLNEDLKPKFADKAVEKFKFDLPNNIVEQEIDMQFRSAWGNFSEDEMK
                     KFREDKEALKKQRETYKNEAIKSVQLTFIIDELAKQKGITVSDNELLQAVYFEAYRYG
                     IDPKEHLESYKKQGMLPAVKMAMIEEKLFNNLFKSGNREDKGE"
     gene            15326..15913
                     /gene="folE"
                     /locus_tag="RPW04_000843"
     CDS             15326..15913
                     /gene="folE"
                     /locus_tag="RPW04_000843"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HDX6294942.1"
                     /translation="MFDQNRKIEFEKCVKTMLEILGENPDREGLLNTPKRVAKAYEFI
                     TSGYWQDPKDVLNDAMFDSSNNEMVLLKDIEFYSICEHHLLPIIGRAHVAYIPDGKVV
                     GLSKIPRMVNIYARRLQIQEQMTEQIAQALQDAISPKGVGVVVEARHMCIEMRGVEKI
                     NSTTTTSALRGIFIKNAETRKEFFDLINSPKSVKF"
     gene            15910..17214
                     /gene="fliI"
                     /locus_tag="RPW04_000844"
     CDS             15910..17214
                     /gene="fliI"
                     /locus_tag="RPW04_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HDX6294943.1"
                     /translation="MSLENIKSKLSKSKSLSSIFGIITKITTNNMEITGLRPSIGDIV
                     RIISIDGNKNELGMVTGLNQTGASVSPFGFVEGFKIGDRVYASDQGMSIPVGESLLGR
                     VVDPFMNPKDSKGAIEATTYVPIMQMPIPAMKRGLINEPFSVGVKTIDGLLTCGKGQK
                     LGIFAGSGVGKSTLMGMIVKNSVAPIKVVALIGERGREVPEFIEKNLNGDLSNTVIIV
                     ATSDDSPLMRKYGAFCAMSVAEYFKSSGRDVLFIMDSVTRFAMAQREIGLALGEPPTS
                     KGYPPSVLTILPQLMERAGKEEGKGSITAFFTVLVEGDDMSDPIADQSRSILDGHIVL
                     SRELTDFGIYPPINILNSASRVMGDVTSKEHRANASKFKRLFSMLKENEVLIRIGAYQ
                     KGIDKELDSAISKKGFMEEFMKQNPTEGFKFEDTIKMLEGIK"
     gene            17411..18601
                     /locus_tag="RPW04_000845"
     CDS             17411..18601
                     /locus_tag="RPW04_000845"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004317998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifS family cysteine desulfurase"
                     /protein_id="HDX6294944.1"
                     /translation="MKVYLDNNATTMVDPEALELMLPFLGEKFGNPNSLHSYGSQTHP
                     ALRTAMDQLYAGINAKDSDDIIVTSCATESNNWVLKGIYIDKILKGDKKRIVTTTVEH
                     PAIGATCSFLENLGVEITRLDVNSEGVITPDDLKKVMGEDVALVTVMWANNETGMIFP
                     IKELAKIAHEYGALFHTDAVQAIGKIAVDVQDANVDFLSFSAHKFHGPKGVGGLFIKN
                     SMQLTSLLHGGEHMGGRRSGTLNVAGIVAMGKALENANKFLKYEESHVRRLRDKLEDA
                     LLEIPEVTVVGKKDSRVPNTILASIKGVEGEAMLWDLNQAGIAASTGSACASEDLESN
                     PIMEAIGADSELAHTALRLSLSRFNTEEQIDYAIDKIKNAVHRLRSISSSYAYAPEWH
                     KSGL"
     gene            18623..19624
                     /locus_tag="RPW04_000846"
     CDS             18623..19624
                     /locus_tag="RPW04_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002949428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein
                     NifU"
                     /protein_id="HDX6294945.1"
                     /translation="MAKSNLISGNIWEEYSQKVQDAMNHPKNMGEITEEQANAMGCEL
                     IIADHGAESCGDAVRLYWAVEKNTDIIKDAKFKSFGCGTAIASSDYMAELCKGKTVDE
                     AVKITNIDVEKAMRDDPEIPAVPPQKMHCSVMAYDVIKAAAASYKGVDPEHFEDEIIV
                     CECARVSLGTIKEVIKLNDLKTVEDITKYTKAGAFCKSCIKPGGHEKREYYLVDILAE
                     TRAEMEAERLRAVADAKISGSGLDSDLSFEELTVVKQLKAVEAVIDENIRPMLVMDGG
                     NMEILDIKKEDADGKIDIYIRYLGACSGCASGATGTLYAIENILQENLSPNIRVLPV"
BASE COUNT         6942 a         3474 c         3323 g         5946 t
ORIGIN      
        1 atattattta tcaaaacaat caaaactata cacataaaca aataaaggat ataaatgtca
       61 aaatatctat atggtgctag tatacaaggt attcaagagt ttatcttcaa gacaaataaa
      121 ctagctcaga tagtaggagc aagtgaaata ctaaagagta ttcacgatga ttttgaacaa
      181 agctatagag taaataatca cgaaatttat ctgaatgcag caggaaatat caaaattatc
      241 ttaagcgata aaaacgcact agaaaaaatc gtaaaagaat ttccaaaaaa agttatgcaa
      301 aaagcgtacg gtataagcat ttctcaagca gtcgtagaaa taaataacaa taatccgaca
      361 acaaatgagt taaaactctt agacgacaag ctaaaagccg gcaggaacaa agccgctata
      421 ccgctagata taagatttag tataatggac tttgtgagaa ataccgctag accctccgtg
      481 ccaaatgaaa aaaagattag caacacggaa aagatagaca aaggctctct tcaaaaatat
      541 aaaaaaagcg ataaaaatga aatttcagcc ataaaaaata aaaaaaataa aatcgcagtt
      601 atacatgccg acggaaacaa tcttggagat ctcattccta atattaaaaa tatctccgat
      661 ttttctaaaa atttaaataa agccacaaaa gaagcttttg atatggcaac aaagactatc
      721 aaaaaagata aatttagaga gataatcctt ggcggagatg atatgactat catttgtgat
      781 gcggattttg cgcttgattt tacaaaaata tatctaacta aatttgaaga actcacaacc
      841 aaatttacaa aatacaattt aacggcttgc gccggtatcg cattttgcaa tgaaaaattc
      901 ccatttcatt acgccataaa tttagcagaa agtttatgtg gcgtagcaaa aaatcatacc
      961 aaaaatccaa aaccaaacga accctcatcg tgccttatgt ttcataacgt gcaaagttca
     1021 aatttccaga cttgggataa atttgtacaa gacgaactca gcgtaaaaag tcaaaatata
     1081 tcatttgact ttggacctta ttatctaaat aaacaaaacc agcctagtat agaaaatttg
     1141 atagaagtat gcagaaatta cgctgatgaa cgtagtccga tctccagtct tagagaatgg
     1201 ataagagtgc tagataataa atcttacgct gagtttatgc tagataggat caacgaaatg
     1261 ctagatagat cttgggcaga tagagagttt atatcaaaat tatttgcaaa tttatcaaat
     1321 aaacatctta ttacaaaaaa agatggaaaa aacaaaaccc ccatctatga tatattgcag
     1381 atccatgcag tcacacaaaa gataaaggag cgactatgaa cctaaactac cgactaaaat
     1441 tttatgacta ctggcatcta agcagcggtt taagcggtgg cgctaaattt aatagtatag
     1501 ttattaaaga tagcaacgga cttccttttg ctcccggtaa aaccataaaa ggcttgttaa
     1561 gagagatggc aaatttgata gatcctaact ttacaaaaat ctgctttgga gataaagagc
     1621 atatggggga atgctatttt tcaaatgcga ctttagagca acaagacacg gattatatca
     1681 tagcaaattc attacaacca tatctatatg atataatcgc acaaactagt atagatgata
     1741 atggtaatac aaaagacgac tcattaagag tgatagaagt tgtcattcca ttagagttgc
     1801 aaggcgagat aagagatata ccagatgaat ttgaagacaa gataagaaaa tcactaagaa
     1861 tgataaaaca aatcggatta aaccgtaacc gcggacttgg tagatgtgag ttttgtgtag
     1921 aggggcaaaa atgaaagagc tattttttga agtaaaattt ttaagtgata tcgtattgcc
     1981 tgcaacctca aatacggaag gaaatataaa ctatcttgat tttataccag gaagtaactt
     2041 tttaggtatg gtcgctcaaa attatgataa atttagtgat agttttgatc tgttttatag
     2101 tggaaacata tgctttaacg atgcccatat ggtctataac ggtaaaataa catataaaac
     2161 gccgtattcg ttttatcata aaaaattaga caataaaatc atatgtaaca aacatatgat
     2221 aagcaaagaa gaatcaaata agctaggtca gcttaaacaa ttaagagtcg gatatatcac
     2281 tgaagattta gagcaggtat taataagtca ctcatactcg caaaaatcat catacgatac
     2341 gcaacaaaga aaaagcaaag atagcgcaat gtttggttat aaatctcttc caaaaggctc
     2401 aatatggaga ttttcggtaa aactaaaaaa tgagtgcaaa gatgaaaact tgattatatc
     2461 tacattgcaa aacagttaca aactcggcaa atcaaagtct gcccagtacg gactaataaa
     2521 aatatcatac ttgcaagact ataaaagtaa taatataaaa acatttaatg actatgaaaa
     2581 ttatgatttt ttatatgcaa atagccgctt agtactcata gacgaccatg gaaatccaac
     2641 atatgatttg agttttatct gcaaagatat agacatttgt tatgaaaaaa caaatatacg
     2701 caactcgtct tttacgcctt acaacgggaa aaaagcgcgt tttgagtctg agagactttg
     2761 tataaataaa ggaagcgtca tagcggtcaa aaaacttacg cctgagcaaa cttctattat
     2821 aaaaaacggt gtcggagcat ataaaagtga aggcttcgga gatataatca taaatccaaa
     2881 ttttctaaaa gaaaatgaac ctaagctaaa aaataccgat aaaagagata gcataaaagc
     2941 aaagaccgaa cccaaaactt ctttaactaa atttctaaaa gctaaacgcg aatcatcaga
     3001 tacaaattta aaaatagcaa atgaagtatc taagcttata aatgaaaaat attgttattt
     3061 tagcagtatt tcatcatctc aatggggaaa tatcagacaa atttgtgata caagcgacga
     3121 tgaaagtctc cttgcaaata tagaaaatag tataaaaaat ggcataaaaa aatggagtga
     3181 tgaacaagca aaacagctta taaacattat tgagtctata caaaaagata agtgtaaatt
     3241 tataaaacta tttgctatga aaataaggag caaaaatggc aactaaaagg catgtagcac
     3301 acgtaacgct agaagcgctc acgcctctaa aagtaggttc acaatcagta gattttttgc
     3361 aagattcgcc agttcaaaaa gactggaata acttaccgat gatacttggc tcatctatag
     3421 caggagtttt aagggtcaaa tttcaagata aatttaaaga taaaacagat gacatatttg
     3481 gcaaagaaaa cggctctaaa atcataatct ccaacgctct tttgctagat aaaacagcaa
     3541 aagtctgtga gacactactt ttagaaaaag atgacttttt gagtctgttt gaaaatttac
     3601 cacttaggga gcataccgcc attaacgaaa aaggcttggc gatagatagg tctaaattta
     3661 atgaagaagt agtatttaaa ggctctaagt ttaaatttag tatcgagtta gtagaagatg
     3721 ataaagagag ttttaatgat attttatcct tgcttataga cgatgatttt aggcttggcg
     3781 gaggctcgtc aaagggcttt ggagagtttg aaataaagcg tattagatac ggatatttgg
     3841 acgtgagcga gtatagtagt tcactaaatt ttgagctaaa aaacgtatat tcaaacaaaa
     3901 cacaagatct tgagctaaaa aacgtgtatc aaaaacaaag tcaaactggt caaaagctta
     3961 ctaagtacga actaaatata actccggata atttttttat gttcggcagc ggctttggag
     4021 actcggacgc cgatatgact ccggtttttg aacaaaccat atcatacgat accagctcca
     4081 tttcaaatcc aaaagttctt atacctgcaa gcagcataaa aggtgcttta cttcatagaa
     4141 cattgtacca tatatgcaaa ttagaaggca tcacggtgga taagagtttg gaagaggctt
     4201 taagagaagc aaaaaaaaga aaagatataa aagacttaaa agatcttgtc gttccgcttt
     4261 tcggcgaggc aaaaaatacg gataaaaagg gcaaaaaagg caatatttta atgagcgatt
     4321 gttttaaagc aaacgacgct caaacaaaga tttttgacca tgtggccata gatagattca
     4381 cgggcggagc gatggacggg atgttatttc aagaaaagac tatcgcaaaa gacaaggact
     4441 cttacctcat caaaatcagt atcaaaaatg agcaaaacat aggtgaaaat ctcattaaag
     4501 cctttgaaaa tgctctttta gacgtgactt taggacgttt gccacttggt ggggctacta
     4561 caaaaggtca tggtatattt agcggaaaag ttttgaaaaa cggtactgag ctaaaggaga
     4621 gtaaatgaac gaatttaaaa cccaaaaaga tatacaaaac tatataaact cactaaaaaa
     4681 ttgcgttggc tacttgcaaa ttagcaatga agatctaaaa gagcataaac aagatagaat
     4741 ttggaagcaa aaaagcgata taaatgtgga ttttagtagt ataaaaggat ttatttatga
     4801 ggctcacttt tttgatgaga cgctcaacaa atccatagct ataagacaga taaacagtac
     4861 ttggctagta gatgaaacga atttatcaga taaagatata caaagcgacg atgagcaaat
     4921 ttatataagc gatatagatg atttactagt aaaaacggtc caaatttggc aagaacgctc
     4981 agatgaattt tgcttgaatt tagcaacact taagttgcaa aaagtagtat ttgccggctt
     5041 tggacataag gagaaaaaat gataaccaca ctatataatt ttgttccgct aaatgagcaa
     5101 atattttatc cagactgggc tgataatgtt agccacgata taccatttag cgacgcccaa
     5161 agcggagaga tagatataac tatcaccgct aaaagcccga tttttatcaa aaatcatgca
     5221 tcgaaagata ataaggaagc gttggagttt tgtcatcaca taaatgaaaa cggtgaaaaa
     5281 gagtattata taccaagtag tagcgtaaaa ggcatgataa gaaacgttct agagatcatg
     5341 agttttggga agataaaaat cgatagtaaa tttaatggcg tattaatcgt aagagatatg
     5401 acgaataatt cacttatagg aaaagcaaac aaatgtggat ttttagtaaa aatagacgga
     5461 aatactaagc tcctagattg tggcaatatc ataactatat cgcataaaga tttagaaaaa
     5521 aattatccgg agctcaaatc cctaaaaact gcgaaagata aatatacgaa atactattta
     5581 ttaaataagg ttaaatttac gaccaaaaag gaaaaatccc gtacagtagc attattatca
     5641 aatgataaca aaaacgctca gagcggtcaa ttagttttta ccggagacat tcaccatgaa
     5701 ttcatattta aagatagcgg taaatatata gaagttacgg atgatgctaa taaaaaattt
     5761 ttaaaagttt ataataacaa caaatccata gacggaaaat atatcatcaa agaatttaag
     5821 gaaaaaatac cggtattttt cgtagaaaaa ggcggcaaaa tcgaagctat cggtataact
     5881 cagctattta aactagctta taacaaaact atagctgacg ctgccaaaca aacagattat
     5941 aaagaagaca agctagatct tagtgaaact atattcggca cggttataaa ctcaaaaaaa
     6001 gctctaaaag ggagagtcta tttttctcat tttaaagcta ttccgccgta taactttgct
     6061 acaaaggcag aggtaatatt aggtactcca aatccaaatt atatacaaca aaccaaaaaa
     6121 gcaaatccat atatcacgct gataaatgaa gatgctaaga tatcgggctg gaaaagatat
     6181 ccgcttcata atgaacttat gaaaccaagc ttaccgaacg acaatcaaga tgttcgtacg
     6241 acttttactc ccttaaatca aaatacggta tttaaaggta agctcaaatt tcataatctc
     6301 agaccagtag agatcggagc cttgattagc gctataacgt ttcataaccg aagcgatgtt
     6361 tgtatgcaca atatcggtat ggcaaaggct ttaggatacg gtaaaataga tataaaatta
     6421 gggcttcaaa atctcaaatt tgataaaaaa gagtacttaa aaagatttga agagcttatg
     6481 actaattttc agctaaactg ggagaactcg gatcagctta ccgagttatt tgatatggca
     6541 agcactaata caaaaaacaa ataagcaact agcctatcaa cttttggaaa acccaaatcc
     6601 aaactacttt aaagataagt caaagacgga aacaaatgac tttatttttg caaaaaagac
     6661 aaaaaaatat ctaaagacat actcgcaaaa taatgattta gtttaaaata gcataaaaag
     6721 caaaatatat atcttaaaaa cccaacctta agcacatcaa aaacttaaga accttgataa
     6781 gtctttgaga aaatcctcaa agacttatag cttaaaaata ttaattaata aatttagtag
     6841 aatttgaatt aaatatatta gatgatttga aaagaatttg ataaaaaatt gaatggtgcg
     6901 gacgagagga cttgaacctc cacaccgtaa ggcaccagat cctaagtctg gcgtgtctgc
     6961 caatttcacc acgtccgcat aaaataaatg gtacgcccaa gaggattcga acctctggcc
     7021 tacggcttag aaggccgttg ctctatccag ctgagctatg agcgcatagc taaaaataaa
     7081 taacaaaaaa gctgcaaaaa ctcagcatct aacttaaaat ggcgcgcccg ataggggtcg
     7141 aacccataac ctacagatcc gaagtctgtc gctctatcca attgagctac gagcgcaact
     7201 tgaaatccat cgatctaaaa tggggtgagt gatgggaatc gaacccacga ccctcaggac
     7261 cacaatctga tgctctaacc gactgagcta cactcaccaa atggtcgggg tgaaaggatt
     7321 cgaaccttcg gccccttggt cccaaaccaa gtgcgctaac cagactgcgc tacaccccga
     7381 agcatgagtc tcactacttc aaattaagag ttagaattat atctactttt ttatacattg
     7441 tcaattaaaa caatcttaaa aactgaattt agcttaaaat aaagccaaat tcatataatt
     7501 acttagaatg cttccttttt gcgtacaaat ttatcatctc aaccgcgaga gaaaatgcca
     7561 tcgcaaagta tatatatcct tttggaatat gaaatttaaa tccctctcct acaagcgcta
     7621 ttcctatcat tataagaaaa gccaaagcaa gaacttttat agttggatta ttatctacga
     7681 aacgacttat agatccgcta gcaagcagca taaccaaaac agccaatatc acagctataa
     7741 tcatgatttc tatatgatcg gccatcccaa cagcggttat aacgctatct aatgaaaata
     7801 cgatatccaa aatgcctatt tggactatgg tagcaaagaa attagaagca ccttttgctt
     7861 ttaagctatc ttcctcgttt tctccggttg catgagagtg aagctctaaa gtggattttg
     7921 ctatcaaaaa cagacctccg gctatcaaca cgagatctct tcctgaaatt tcataatcaa
     7981 ataagctaaa caaaggagtt gtaagcttca tgatccaaaa taagctcaaa agcaataaaa
     8041 ttctagtcac catagcaagt ccaagcccta aaactctagc tctatctctt tgatgagcag
     8101 gaagtttgcc acacaaaatg gctataaaaa ttatattatc tatacctaaa actatttcca
     8161 aactagttag tgtaagtaag cttatccaag cctccggaga gtaaatccac tcaagcatta
     8221 ttttccttgt ttgttaaaat atttatgatc gtttttggta aaatttcgtg ttctatcttg
     8281 tgaatggtct cttcccactc ttcaaaagtt ttcgagtttc tttgaaatgt ctcttgagct
     8341 atgattttac caccgtctag ctcttcgctg acagaatgaa cgctcactcc gccgacagcc
     8401 atatcgctat caaagctctc ttttatggca tgagcgcctt taaaaagcgg taaaatgctc
     8461 ggatgaagat taattgcttt tatttttgaa gtaaaaacat gagttaaaat cctcataaaa
     8521 ccggctaaaa cagtcaaatc tatctcgttt ttttctatct ctttaaccaa agccgcatca
     8581 aattcctctc ttgagataaa cttagaacta tcgataataa gagtttcaag cccgaatttt
     8641 ttagctctct ctatcccata agcgtcagtt ttgttgcaaa tgagtagttt tgcgactatt
     8701 tttacatctc caaaaacttt tccgtgcact ttttctagta tcgcttctaa atttgaaccg
     8761 ctaccgctaa acaatatagc tatatttttt acaaccattt aagtccttct ataatgtcat
     8821 ttggcgtgaa actataatcg tttgctttgt aattttgcgc cgttttttga tgagctaaaa
     8881 ctccacttat cgctgagtca agcgggctaa aaccttgagc caaaaatcca agaagtattc
     8941 cgcaaagtgc gtcgccgctt cctgctactg ctaaactcgg ggtgcctaaa tttgatacgt
     9001 aaagtacgcc gtttttggct atgatggcgt ttgcgccttt taaaaccaaa acgcaagaaa
     9061 aggttttaga aaattctcta gacagctcaa agcggcttct ttgcacatct tctatactga
     9121 aatttccaaa tccggctata tttaaaagac tagaaaactc ttttggatga ggagttaaaa
     9181 tggcgtcatc tttaaccgta aaactcaaaa tttctttttt ataaaacata tctgcatcga
     9241 ccacgcaagg tctagtcaat atctcgttta tatcaaattt agcttctcca agccccattc
     9301 caacagcgac cgcgtccgct cctttgaaac tatttttttg catgatctct tcatctaaat
     9361 ttatattttg tccatttaaa tttacaacgc taactctacc ggagcccatt tttagcgcag
     9421 ctttagcaca aattttagca gctccgctta actcgccgca agccacgaaa gcatggccga
     9481 aatcgccctt atttgtattt aaaatctctc gactaggaag cctaagatcg tcaaactcaa
     9541 gtaaaaaatc gctactagaa cttgaaaatt tactttcgca aatacctaaa ttcgagcata
     9601 ctatttcacc tacaaaatct tttgcagcgt cgctataaag tcctagtttt ctcgcaccca
     9661 tagttacggt aaaatcggca ttaaagcagg cccctaaaat gcgtccgttt ttttcaagtc
     9721 cgcttggaaa gtcgatcgct atcttaagag aggaagtatt atttatcaaa tttaacattt
     9781 gcacgatttt ttcgtccaaa tttttattta gtccactacc gaatatcccg tcaattacgc
     9841 aatccactct atccaaactc aaattttcac acatttttac gccgatttgc ttagctattt
     9901 ttagttgagt tttgcaattt tcatttaaat ttgaagtggt gaaaaacagt tcgcactcat
     9961 aatccccctc aagcattcta gcagctgcta tagcgtcgct tgcgttgttt ccgcctccgc
    10021 aaacaacaag gatttttgag cctattttca aatttaccct tactaaattt gctacactaa
    10081 gagctgcatt ttcttgtaaa ataagctcat ttaaaccata atttaaaatg caatttttat
    10141 caaatttatc actgcttata aataattttt tcacattttc atcctataac tgagactctc
    10201 aagcatatga actttactaa tattttcttt accatcaaga tcggctatag ttctagcaac
    10261 ttttagcgtt ttattgatac ctcgttgact caaatgataa ttaacaatcg ctttatttaa
    10321 agtaatctta gcatctttat cgcattgaca aaacttagca atctccgcat cttttaactt
    10381 tccgtttagc tcactttgac cgcgtacaat ctgtttttta aaagcttcta aaaccatacg
    10441 atgcatatct tcgctgctaa gacttggttt atcttcgctg tttatttcac ccattgcaac
    10501 atagatatct atcctatcaa gaagagcttt tgagatcata ctttgatatc ttgctatatc
    10561 tttgtcgcta catctgcagt tgttaaattt actaaaagca tttccgcaag ggcaaggatt
    10621 catagccgca acaaataaaa acttagtttc ataactagtt tttgaattta cgcgagagat
    10681 gttgatttta ttatcttcta acggttctct taagctttca agtacctgtt taccgaaatg
    10741 cggaaactca tcaaaaaata aaactccgcc atttgctaaa gcaacttcac ctatctttgc
    10801 cataccgctt ccaccgccaa aaatagagct tctcgtgctt gtatggtgtg gactgcgaaa
    10861 tgctcttaaa gagctaaaat cacaattatt tgagtttaaa gactgatacg cactagctaa
    10921 aagtatctca ctcaaactct gcggcggaag aatataagca aggcgctttg cgctcataga
    10981 ttttccacac cctgggcttc cttcaaaaag tatattatgc atacctgcgg cactgataat
    11041 gcaagccctt ttggctcttt cttgaccttt tatatcctta aaatctagtt cgtaattaaa
    11101 attcggaaca aattttttat cgtttatttc tataacattt tcaaaaagag gatgagacga
    11161 tactattttg cagctttgtt taaactcttc atttaagaaa aaatctctag cttcgtttaa
    11221 atttgaaacc gtaaaaacgg ttaaattcgg tatcattgca gcttttagcg cgatatcttt
    11281 gggaagtaaa acatttgcac ttttagtctt tacgctaaga aataagagca cagaaaatag
    11341 ctcggcactg ctctttaaac taccatctaa actaagttct ccaaatacga aaaaatcact
    11401 atcaaatttc tctttttgca acaaaataag aagcgctata ggtagatcaa agtgcgagcc
    11461 gtctttttta acatcgctag ggcttaagtt tatgacgatt ttcatagcag gtagattaaa
    11521 gtcttttatg accccaagtg cagatctcac tctagtcaca gactctttta tggtagtact
    11581 tgcaagaccg actatatcaa atccaggaag cgctctaaga aaagtagatt ctatatctat
    11641 gatatgtaat ttactgccta aacaagcact ttttagagat ttcatatcgg ttttagcttt
    11701 gattttttct tgtactcttt atcaaatttt ttgcgtttgt taaatccaat tttttctata
    11761 aaaagatgtc cgtctaaatg atcgttttca tgctgaatag ccacagacaa aagtccatct
    11821 gcttctagct cttttaaatt tccaaatcta tcttgaaact gtattttaat atctttagca
    11881 cgtttcacat cttcatagta cccaggtacg ctaaggcagc cttcttgata tacgatttca
    11941 ccgtctttgg atataaattt tggattgatt atctctaaaa gatcattttt atcttgcact
    12001 tcatcttcgt ttattaaatt tattataaaa actctaattg gtttaccgac ttgtatagca
    12061 gctaacccta tgccgttttt tgctatcatt gtatcataca tatcatctaa aaactttgct
    12121 agctcattat caaatttgac aacgtctgcg cttttttcaa aaagtctttt atcgggatag
    12181 gtaattacat ctaaaatcat ctaatttcct tctacaacct cataaagctt agctcttttt
    12241 ccgctttttg ctaatccatc aagggctttt gaaagtgtct cttctacgat atgttttaaa
    12301 tttaacgccg ctacagatat ctctatatcc atatctatct catcttcggc tataaaaaat
    12361 gtagtttggt agagcatttg gcctactcta tcgcacgctt ttttagcgcc ttctatatcc
    12421 gtatgtttca ttatcatacc aaaatatcca tcaccataat gcgctacgac atcgcttctt
    12481 cttgaagttt ttagcaaaat tttagctata tttcttagta ttccgttttt gtctttcaaa
    12541 ctaggtatgt tgtttaaaac actgtctttt acatgtatca gcataaaact tacattgtag
    12601 ttatatcttt ttacatgatc aaactcgtct tctaatactt ttaagaaata ttttttatta
    12661 tacactccaa atttagaatc ataaatagac tgctcttcta cgtttttgaa tatacgattt
    12721 acatcttcat agctattttt aataacatct aaatgtctct ccataagagt atttagctta
    12781 tctaattcgt cgctaaatga ctttatagca gcttgcacct caagcggatt tgcatttgcc
    12841 tttgtctctt ctagtctttt tttgactata cctttcataa taactaaatt tttatatata
    12901 agagtgatga cttgaagcat atttttaatc tgaccaaaac ctaatttgat ctctttttcg
    12961 atcaaagcct gcttctctaa tacgtcatct ttatcataat ctataagctc taaaactttt
    13021 ttttgaaatg acgaggactt agactctaaa agttttctaa aatatatatc aaaattttca
    13081 ggagttgctt ggatattgtc atcgcttaac tgttttaaaa cagtctgtga gaatttattt
    13141 aaatcaacgg ctacttcatc gtttttatct gaatttttta cttttaccgc ttcttcgcga
    13201 cttctctcag caacagactt agtgatctga ttttgttgaa ctatatttgg cgaaacatct
    13261 ttatcatctc ttaacttaac cactaaaacc tcacttattt aaagcttttc tccaagacat
    13321 tatctataag tccatactca gctgcttcat gggcactcat aaaaaagtct ctatccgtat
    13381 ctttagctat tttagcaagt ttttgacctg tatttttagc taaagtgcta tttaatacct
    13441 cttttaagcg taaaatttct ttcgcttgaa tttctatatc ggttgcttga cctctagcac
    13501 cgcctaaagg ctgatggatc attatacgag agtttggaag agcgtaacgc tttccttttg
    13561 ttccgcaact aagtaaaaaa gcgcccatac tagcagcttg tcctatacaa atagtgcaaa
    13621 catctggttt tatataattc atagtatcat atatactaaa tccgctcgtt acgactccgc
    13681 ctgggctatt tatatataga tatatatctt tgtccggatc ttcagcttct aaaaatagca
    13741 tttgagccac tatggcgctt gccattgcat cttctatctc accgcttagc attataatac
    13801 gatcttttaa aaggcgagaa tatatatcgt aacttctctc gcctttgcta gttctttcaa
    13861 ctacgtaagg gatataataa ctcattattc gcccttatct tctctattac cacttttaaa
    13921 taaattatta aataatttct cttctatcat agccatttta actgctggaa gcatgccttg
    13981 ttttttgtag ctttctaaat gctcttttgg gtcaattcca tatctatagg cttcaaaata
    14041 taccgcctgt aaaagctcat tatcgctcac ggtaatacct ttttgctttg ctaattcatc
    14101 tatgataaat gtaagctgaa cgctttttat agcttcattt ttataagttt ctctctgttt
    14161 tttaagagct tctttatctt cgcggaattt tttcatctca tcttcactaa aatttcccca
    14221 agcacttcta aattgcatat caatctcttg ctctactata ttattaggta gatcaaattt
    14281 aaatttttct actgccttat ctgcaaattt aggcttcaaa tcctcattta aaagtttttg
    14341 gaatttatct gctctgatct gctctttgat tctatcttct agttgctcgg cagttggatt
    14401 ttcttcatta ggcattagtt ttttaagagt ttcttcatct aattttccag cttttttacc
    14461 ttgaatctcg tgtaatttta ctttaaaaac agcagatttt ccggcaagat gagcagcacc
    14521 gtactccgca ggaaaagtaa catttacatc tttttgttcg cctactttta aacctaacat
    14581 accatcttca aatcccggta taaactgtcc gcttcctatc tcaagaagat agccttcggc
    14641 tttcccgccc tcaaaagctt cgccatctac aaatccttca aaatcaaatt tagcaaaatc
    14701 acctttttct aaactctctt tttcaacttt ctcaagagga gctatcattt tcaaaaactc
    14761 atttatcttc tcttcgatct cttttttggt aactttagga gttgtatatt caggaataat
    14821 ctcctcataa ccatcaactt taacttctgg tttgaacgaa atttcaagct caatatctat
    14881 atttccgtct ttttcatcaa atttaagtat cataggctcg ccgattatat cgctagattt
    14941 tttagcgatc aattttaagc tctcgtttac tatatctcta aatatttcac ttttagcatc
    15001 attttctaag tcttttccgt atctttttaa cacttgcgca accggaactt ttccttttct
    15061 aaaaccatca atttttatat ttttagcagc tttcttagct aaattctcaa ccttggcgtt
    15121 aagctcactt gctttaactt cagtttgcgc agcagcattt gctgtgttta aaagttttgc
    15181 tttaacttcc attattttcc ttttattatg ataaaaaatt atctcgcaat atatcaaatt
    15241 tttgctttat ttaagtataa attagtaaat ttattactat aaaagtcaaa atattgtaaa
    15301 atcgcaaaaa tttttaaggt gattaatgtt tgatcaaaat agaaaaatcg aatttgaaaa
    15361 atgcgttaaa acaatgctgg aaattttagg cgaaaatcca gatagagaag gacttttaaa
    15421 tactccaaaa agagttgcaa aagcttatga attcattaca agcggatatt ggcaagatcc
    15481 aaaagatgtt ctgaatgacg caatgtttga tagcagcaac aatgaaatgg ttttgctaaa
    15541 agatatcgag ttttacagta tttgcgagca tcatttgctt cctattatcg gtagagctca
    15601 cgtcgcttat ataccagacg gaaaagttgt aggacttagc aaaattccaa gaatggtaaa
    15661 tatatatgca agacgtctgc aaattcaaga gcaaatgaca gagcaaatcg ctcaagctct
    15721 tcaagatgca ataagtccaa aaggcgttgg agtagtagtc gaagcaagac atatgtgcat
    15781 agagatgcga ggagtagaaa agataaactc tacaacgacg acatcggctt taagagggat
    15841 atttataaaa aatgcggaaa ctagaaaaga gttttttgat cttattaatt ctccaaaatc
    15901 ggtgaaattt tgagcttaga aaatattaaa agtaaactta gcaagagtaa aagcttatct
    15961 agcatattcg gtatcattac aaaaatcact acaaataata tggagataac agggcttcgt
    16021 ccgagtatag gtgatatcgt acgaataata agcatagatg gcaataaaaa tgagcttggt
    16081 atggtaactg gattaaatca aacaggagct agcgtaagtc cttttggatt tgtagaagga
    16141 tttaaaatag gagaccgagt gtatgctagt gatcaaggta tgagcatacc agtaggcgag
    16201 tcacttttgg gtagagtagt agatccattt atgaatccaa aagactctaa aggtgccata
    16261 gaagctacga cttacgttcc gataatgcag atgcctattc ctgctatgaa aagaggactt
    16321 ataaatgagc cttttagcgt cggagtaaaa actatagatg gacttttaac ctgcggcaaa
    16381 ggtcaaaaat tagggatttt tgcaggaagc ggagttggga aatcaactct aatgggaatg
    16441 attgtaaaaa actccgtagc gccaataaaa gttgtagctc ttatcggcga acgcggacgt
    16501 gaagtacctg agtttataga aaaaaactta aatggcgatc tatcaaatac cgttataata
    16561 gtagcgacaa gcgacgatag tcctcttatg agaaaatatg gagcattttg tgctatgagc
    16621 gtagcagaat attttaaaag tagcggaaga gacgtactat ttataatgga cagcgttact
    16681 agatttgcta tggctcaaag agaaatcgga cttgctttag gagaacctcc tacaagcaaa
    16741 ggctatccgc caagcgtatt aactatactt ccacaactta tggaaagagc gggaaaagag
    16801 gaaggaaaag gcagcataac cgcgtttttt actgttttgg ttgaaggaga cgatatgagc
    16861 gatcctatag cagatcaaag cagaagcata cttgatggac atatcgtatt aagcagagaa
    16921 ttgactgatt ttggaattta tccgcctata aatatcttaa actctgcaag tcgtgttatg
    16981 ggagatgtaa cttcaaaaga acatagagct aatgcttcta aatttaaaag actattttcc
    17041 atgctcaaag aaaacgaagt attgataaga ataggagcat atcaaaaagg tatagacaaa
    17101 gaattagaca gcgcgatatc gaaaaaagga tttatggaag aatttatgaa acaaaatcct
    17161 acagaaggtt ttaaatttga agatacgatt aaaatgcttg aagggataaa ataacgctct
    17221 ataaggcaac tcaggcattg taaatttaga tattttgata gtagatatca agtataaata
    17281 atttttataa tttttgtttt catttactaa attttaaagc aaaatttata aaaattgtta
    17341 tatcattcag aaataaaaga taaaatttat cctaattaaa tttaggatga attattaaga
    17401 aaggctaaat ttgaaagttt atttagataa taacgcaaca actatggtag atcctgaagc
    17461 tttggagctt atgctaccgt ttttaggcga aaaatttggt aatccaaact cacttcactc
    17521 atatggaagt caaactcatc cggccttaag aactgctatg gatcaactct atgcaggcat
    17581 aaacgcaaaa gatagcgatg atatcatagt tactagctgc gcaaccgaga gcaataactg
    17641 ggttttaaaa ggtatttata tagataaaat attaaaaggg gacaaaaaac gtatagtaac
    17701 gactacggta gaacatcctg ccataggtgc aacttgctcg tttttagaaa atcttggcgt
    17761 agaaattaca agattagatg taaatagcga aggcgtaatt acccctgatg atttaaaaaa
    17821 agttatggga gaagatgtag ctttagtcac agtaatgtgg gcaaataacg aaacaggtat
    17881 gatatttcct atcaaagagc ttgctaaaat agctcatgaa tatggagctc tttttcatac
    17941 ggacgcagtt caagcaatag gaaaaatagc agttgacgta caagatgcaa acgtggattt
    18001 tctaagcttt tcagcacata aatttcatgg gcccaaagga gttggaggac tatttataaa
    18061 aaatagtatg cagttaacaa gtttgctcca cggcggtgag catatgggcg gtagaagaag
    18121 cggaactcta aatgtggccg gcatagtagc catgggaaaa gctctcgaaa atgcaaataa
    18181 atttttaaaa tacgaagaga gccacgtaag aagattaaga gataaattag aagacgctct
    18241 tttagaaatt cctgaagtta cggttgtagg caaaaaagat agcagagtac caaatacaat
    18301 cctagcctct ataaaaggag tggaaggaga agctatgcta tgggatttaa atcaagcagg
    18361 tatcgcagca agtactggtt cggcatgtgc tagcgaggat cttgagagca atcctataat
    18421 ggaagctata ggagcagata gcgaactagc tcatacggct cttagactct cattatctag
    18481 atttaacact gaagagcaga ttgattacgc tatagacaag ataaaaaacg ctgtgcatag
    18541 attaagaagt atttctagta gctatgctta cgcaccagag tggcacaaat ctggattata
    18601 aatcaaattt aggaaagaaa agatggctaa aagtaactta ataagcggaa atatatggga
    18661 agagtattca caaaaggtgc aagatgcaat gaatcatcca aaaaatatgg gtgaaatcac
    18721 ggaagaacaa gcaaatgcga tgggctgtga gctcatcata gcagatcacg gagctgaaag
    18781 ttgcggagac gccgttagat tatattgggc tgtggaaaaa aacacggaca ttataaaaga
    18841 cgctaaattt aaaagttttg gttgcggaac agctatagct tctagtgatt atatggctga
    18901 actttgcaaa ggaaaaacag tagatgaagc cgttaaaata acaaatatag atgttgaaaa
    18961 agctatgcgc gatgatccgg aaattccagc tgtcccgcca caaaaaatgc actgctcagt
    19021 aatggcgtac gatgttataa aagccgctgc ggctagctat aaaggcgtag atccagaaca
    19081 ttttgaagat gaaataatcg tctgtgaatg cgccagagta agtcttggaa ctataaaaga
    19141 agttatcaag ctaaatgatc taaaaacagt agaagatata actaaataca caaaagcagg
    19201 tgcgttttgt aagtcatgta tcaagcccgg cggtcacgaa aaaagagagt attacctagt
    19261 cgatatttta gccgaaacaa gagcggaaat ggaagctgag agactaagag ccgtagctga
    19321 tgctaaaata agcggaagcg gacttgatag cgatcttagt tttgaagagc taacagttgt
    19381 aaaacagtta aaagccgtag aagctgtgat cgatgaaaat atacgtccga tgcttgttat
    19441 ggatggcgga aatatggaaa ttttggatat taaaaaagaa gatgcggacg gtaaaataga
    19501 tatttatatc agatatctcg gggcttgcag cggttgcgca agcggagcta caggaactct
    19561 atacgcgata gaaaatatct tgcaagaaaa tcttagtcca aatatcagag tacttccggt
    19621 ctgataagtt ttaaatttat aaaacaatac atacttataa acaatagttt aaggctaatt
    19681 taagt
//
LOCUS       DAPPKW010000026        19379 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.026, whole genome shotgun sequence.
ACCESSION   DAPPKW010000026 DAPPKW010000000
VERSION     DAPPKW010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 19379)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19379)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19379
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.026"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            133..858
                     /locus_tag="RPW04_000847"
     CDS             133..858
                     /locus_tag="RPW04_000847"
                     /inference="COORDINATES: protein motif:HMM:NF020897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HDX6294946.1"
                     /translation="MFKVLFVNNNGLSFSEISQITGISKGTLHPILTTLIYEDFLQIN
                     ENKINIGKNCFKIGNAYVHSLDFIDTIKPHMKDIVFVCGEICQLGVLDGSDVLYIEKT
                     EPKQAIKLESYVGKNLPAYATALGKCLLSGLNDDEIRKLYLDKNSFQKYTQNTVSDIS
                     SLLKQIYEVRANGYAHEIAESDKDIECVAVPLRSDGKIIASISVSLPIYRSNNEKIRS
                     IIEILKLQAALIEKENSLIYKSK"
     gene            1085..1972
                     /locus_tag="RPW04_000848"
     CDS             1085..1972
                     /locus_tag="RPW04_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HDX6294947.1"
                     /translation="MKSVIYTPTVTIFDDEQNIDLKANARLLEYLCEFSLDGFVLFGS
                     TGEFTAFDTEQKKKLIDLYLKISKYPLFVGTGSLNFKECVELSNYSIDNGAKGVLVVS
                     PYYYAASQENLFDYYDKLAKMVHGNIFIYNYPARTGNDISSKTVLKLIERNTNIKGIK
                     DTTPMVSHTKEIIEATKQHNFSVYSGFDDHFVDNIFAGGVGCISGLSNIAPDIWTKLV
                     KSANDNDFINLKNCSSAINKLMQLYTLDTNFSLIFKKLLNLNGLNLNENAIFPFNSLD
                     EIKFEKAKMILEDARRLVK"
     gene            1969..2220
                     /locus_tag="RPW04_000849"
                     /pseudo
     CDS             1969..2220
                     /locus_tag="RPW04_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002901625.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
     gene            2239..3486
                     /locus_tag="RPW04_000850"
     CDS             2239..3486
                     /locus_tag="RPW04_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HDX6294948.1"
                     /translation="MASQKLKNKKQAASNDKKYELQGYRRSDGSFGLRNHILILPSVH
                     CANKVVEKIAAAINYGLGLGNDECKIVYVTHQHGCSQLEFDARQTMDTLVGNGANPNV
                     YGVLVIGLGCEVISAQNVAKEIKDRAPYKEVEYFTIQQSGGTRKSIEKGIKIAKNMLQ
                     NALKFKKSRGDLSDLILGTECGGSDSFSGLSANPALGVASDIVIQKGGSVILAETTEL
                     IGAEHILAARSINEDIKEQVISTITSFEQRVLDSKADIRGANPSPGNIEGGLSSIEEK
                     SLGCIYKAGNQPVISVKRYAQPITQKGLTLMDTPGNDIEQLSAMVAGGCNICVFTTGR
                     GTPTGSPITPTIKVSSNSAIYHNMNDAIDINAGSIIDGQKNIKEVGEEILDFIVAISN
                     GKLTKAEQNDQNDFSVWRLATTV"
     gene            3507..4283
                     /locus_tag="RPW04_000851"
     CDS             3507..4283
                     /locus_tag="RPW04_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDX6294949.1"
                     /translation="MDLNLKDRVVIVTGGAKGIGAGISLGLAKEGAIPIILSRSKASN
                     EFENSLKSLTSKFEFIQIDLNNTDEIKPVIDYAAKEYGGIYAVVNNAGANDNKDLEST
                     SWMEFEKSLHSNLTHYYEVVHSSLPYLKASKGSILNISSKTALTGQGKTSAYAAAKGA
                     ILALSREWAAALAKDSVRSNAIIVAECYTPLYENWIKNFENPEARLKLITEKIPFEHR
                     FTTVKEIADTAIFLLSELSSHTTGQWIFVDGGYVHLDRAL"
     gene            4294..5493
                     /gene="fucP"
                     /locus_tag="RPW04_000852"
     CDS             4294..5493
                     /gene="fucP"
                     /locus_tag="RPW04_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HDX6294950.1"
                     /translation="MQNKNIKITFILVTSLFLLWGLSYGLLDVMNKNFQTHLGITKAN
                     SGLLQAAYFGAYFIIAIPASLIASKYSYKVGIIVGLLLYAIGSLMIIPASNSANFDLF
                     LLSFFILACGLGSLETNANPYITKLGSDKRASFRLNLAQSFNGVGQFIGPIIGGSLFL
                     SLSHGNLDENMKNVQMVYVGIAAIVLFIMLLFIIIKMPEITNEDEKQQNSGGYKDLLN
                     YKHFKIGVLAQFLYVAAQVGAGAFFINYSVEHWDTLSDANAAWYLSTALVAFMIGRVV
                     TTPFMVKFSPNNVLGIYALINSIIIILLYILSGPISVYALIAMFFFMSISFPTIFALS
                     IVNIPSNLVKPASSILVMSIVGGAIMPFIMGKIADVTHQTAAGFLVLFPCFLFVAWYG
                     FKGSKLD"
     gene            5519..6622
                     /locus_tag="RPW04_000853"
     CDS             5519..6622
                     /locus_tag="RPW04_000853"
                     /EC_number="5.1.3.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HDX6294951.1"
                     /translation="MLEIVDTHFHIWDLDILHLPWLNSYKGVINRSFDIDDICKAYGK
                     YDLCFKGGIYVEVDCDDRVKEDEHIFSLNSPFILAKIMRAKLCEHMRLPLGIAGVREP
                     LHIDSSKRGRCLEKSFISGLEVLSQMDLIFESCNRVDEIEDIYSALSLVPDLKVVINH
                     CANVKELNSEYKRTMSKIAKLPNAYLKISGFATNDKSFVKNLLNFVTGEFDKSKLLYA
                     SNFPVVELYSNFDEHLQILREYFADDADFFSKNAKKLYKINKTQKFASVIKIRKDKID
                     TYKKLHENPLSGVNKMIKECGITRYEIYHRDDMLFSIMEYNGDDFDYDMTKMANDEAT
                     KEWWKLTDPCQKRIEDAKKDEWWAAMDLVYRLK"
     gene            6732..7118
                     /gene="fliW"
                     /locus_tag="RPW04_000854"
     CDS             6732..7118
                     /gene="fliW"
                     /locus_tag="RPW04_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliW"
                     /protein_id="HDX6294952.1"
                     /translation="MTFSVKSPILGFEGIKNVEITKIDDFFVKMQDKDGDTSFTMINP
                     YSLRNYEFDIPTYYQDLMQISDKSELQVYNMLVISSPIEESSVNFMAPIVCNTTNMTL
                     SQVILDPVNYPQYSQAEKISTLLKKK"
     gene            7146..7820
                     /locus_tag="RPW04_000855"
     CDS             7146..7820
                     /locus_tag="RPW04_000855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HDX6294953.1"
                     /translation="MKHAFTVLELILVIVIVGISTAAVPALVMSSTKTNEAVLLQEAI
                     TSSKTKLSQILLYPWNSALNQSNSNTSSFPILKTSSVDNLAEKRPGLNSFYNKRDITR
                     LKDDGTTEEVNAEIVGTAAKKEGINQFDQDKGSIDISNPKFNERKNILKLDYTVTVSY
                     LYVPDNEGNLEGAYTKNTTNEISVKIETTATLSDKKKNVVMRAYSFNIGTPKIITKSF
                     ANSEFK"
     gene            7820..8746
                     /locus_tag="RPW04_000856"
     CDS             7820..8746
                     /locus_tag="RPW04_000856"
                     /inference="COORDINATES: protein motif:HMM:TIGR02532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HDX6294954.1"
                     /translation="MKRAFTMIELVVAIVISGILLSIGVKIFDVIYTNYIRQKSIVEL
                     ESISKTVIEQIEKRLSYRIKPTLSVNIENKYKRLDKLTDDDIKTNKKYPIIWYMQSYE
                     TQRIFNDDKRILGWSGFINLDKDKTHPDKTDKNEEVLTINSPGSNFSKIENIIKDLGF
                     SDLFIVFKVDQGNNNDQYYNIKSDDKNPLAHKIKIKNDTNLNIDKPKFLEKKDTNKLE
                     ISELYYLSHSINQLSIDKDNNLWLTEFIPFGNDNGTHKEVRKNVLAENVSSLRFMYLG
                     GSDSISIKLCLEDPNFKIKGQKLEVCKTQVVQ"
     gene            8746..9225
                     /locus_tag="RPW04_000857"
     CDS             8746..9225
                     /locus_tag="RPW04_000857"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294955.1"
                     /translation="MKKAFSLIMAIFFVVMLGIVGTLTSRIIAGGSKESADLYLYEQA
                     KLLAISGTEYAILRIQEKDFKEGCNNNFTLSYPTKDKPIFTITVDVTYIGANPPTKCT
                     EWIDSGITQDKDGQELKDADGKPKTSIQAVILDTSVISDASITQEQISIKRTTIQKP"
     gene            9269..9799
                     /gene="raiA"
                     /locus_tag="RPW04_000858"
     CDS             9269..9799
                     /gene="raiA"
                     /locus_tag="RPW04_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002946391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HDX6294956.1"
                     /translation="MNTSIVGKQFELTQAIKNYIDNAFESLSKYNLDIISSRVIISAD
                     EKQGKKGFDVEFAINLAKKDTIVIRQKDKDLYAAIDLAVDRASKVLRRHHDKLTTHKN
                     KDDEKASINGIIDEPHIDGVDEIVPAELELYKPIEIEEALEKLKNSGAQFYVFNDMEA
                     KMRIIYKRNDGKFGLY"
     gene            complement(9854..11127)
                     /locus_tag="RPW04_000859"
                     /pseudo
     CDS             complement(9854..11127)
                     /locus_tag="RPW04_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732069.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
     gene            11191..11373
                     /locus_tag="RPW04_000860"
     CDS             11191..11373
                     /locus_tag="RPW04_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294957.1"
                     /translation="MKRIVSFVILVFLLQGCLWINERGISNKYYNDCKEYYDGAGIYH
                     KKCDENLLDWSNESNK"
     gene            11357..12205
                     /gene="cmoB"
                     /locus_tag="RPW04_000861"
     CDS             11357..12205
                     /gene="cmoB"
                     /locus_tag="RPW04_000861"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HDX6294958.1"
                     /translation="MNLINNANKKLFEKINNLKNYSCQVKFSDAIEIEINDFDDNIID
                     LAKDLKPWRKGPFKLNATLIDSEWQSFIKFNGLKPFLNLKDKIVADVGCNNGYYMFKM
                     LELEPKSIVGFDPSVLSFLQFSFINHFVKSNIKFELLGVQDLPNYNIKFDTILCLGVL
                     YHRSDPIKTLKELKSSLKKGGEVFIDTMFIQRDDEFVLSPKSTYSKIPNIYFIPSIKA
                     LRNWCERAKFKTFDILSIKNTDFNEQRKTQWIYGESLENFLDPNDPKLTIEGYPAPKR
                     VYVRLS"
     gene            12217..12726
                     /locus_tag="RPW04_000862"
     CDS             12217..12726
                     /locus_tag="RPW04_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009495936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HDX6294959.1"
                     /translation="MAENVYSDSIKDSATVIDESLFQNSLNIPQAINTIFNGSIIDAK
                     QNYSKTVLKTNNDMIYDDEGLIHSGFIFSAADWSAQVAVNQPFSVTIGSKVSFFAPAK
                     VGDIIEFEAHAYFDESKKREIKVIGKIKEIKVFEGTFQIVVLEDHIFKLQKKNKEKQN
                     EQAASKAAK"
     gene            complement(12719..13309)
                     /locus_tag="RPW04_000863"
     CDS             complement(12719..13309)
                     /locus_tag="RPW04_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDX6294960.1"
                     /translation="MQILSKSFGIYDTNCYILINESGEVIVDPGDGAFEWVSKVCKNP
                     LAILNTHGHFDHIYDDNAIRDKFKIPIYIPKDDAFLCEQDPFTYLQTTFKPDFLVEDN
                     QIIEIGSFKFTFHHFAGHTPGCSMIEIGDVMFSGDFIFKNSIGRYDFPFSNAVEMRKS
                     LERVLNFKDFKLYPGHGDQTSLESERRNLKRWMQAI"
     gene            13400..14146
                     /locus_tag="RPW04_000864"
     CDS             13400..14146
                     /locus_tag="RPW04_000864"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HDX6294961.1"
                     /translation="MKDFKFLENKLLCFLDKYLKQSGASGFSIGVSGGLDSAIVATLC
                     SKVAKTHALLMPTNSSNNLNLEDGLILCEKLDLEYEVINIEPIVQSFISVLDVTDKLR
                     KANIIARVRMILLYDNSAKLGTLVAGTSNKSERLLGYGTIYGDTACALNPIGDIYKSD
                     LFLFAKYLEIDENIINKAPSADLWEGQKDEDEIGFAYSSVDAVLKEFEKNDQRENLYA
                     IFNKNLVDSVLDRVEKNSFKLNPVPIANIS"
     gene            14160..15293
                     /locus_tag="RPW04_000865"
     CDS             14160..15293
                     /locus_tag="RPW04_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HDX6294962.1"
                     /translation="MRDIAFFRPYITEREHELVKESLDKNAVYMVTNLEDNIKKYFGV
                     KHVITTNNGTAANHLALCAMDLKRGDKIICSVNAFPSIAQVIRHFDAEPIFVDIDEDD
                     FNISPTELEKVLKEQKHKKLKAAFITHVAGQSADMDTIYALAKENGIKIIDDASRAMG
                     ATYKGKLIGNLDSYMSCFQINPQVQHAIASTGIILTNDDEMAKRARLIRNHAIVNDSF
                     DKDGNLGYVYDVVDIGQKYDLNSLCAAFSIAQFEKLEIFIRRRKEIAAIYNEELKTCP
                     HITTPVIKRDHIYNQYIIKVDKNRDGFARELKDAGIHTGLHYIPLHLLSYYKTKYNLR
                     VNDFPKALKVYQQVLSLPIYAAMSNDEVKYVCDTIKSVAKTRV"
     gene            15286..16230
                     /locus_tag="RPW04_000866"
     CDS             15286..16230
                     /locus_tag="RPW04_000866"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002951395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HDX6294963.1"
                     /translation="MFDRKLHSWINRYFYRPRYLETLISMALSPLALIYYILVVIKFR
                     LSKQIKFDIPIISIGNLIVGGTGKTPLTKAIFNEYNTKFKTFIILRGYKRSSKGMLKV
                     CIDGEILCSVDESGDEAMEYALSLKNANVIVSENRKLAIEEAIKYGAELVLLDDGFGK
                     FDIFKFNIILKPTIEPIFKLVLPSGAYRYPKSFYKFADFIPTKDDIISSNYIINKTTN
                     MVLVTAIANPLRLKKLFDSCLGIELFEDHHKFKKSEIEDIFKKWNATTILVTQKDYVK
                     IRDFGFNVSILELRTEISSQFKLKLDKFIDNYNQNMIK"
     gene            16256..17098
                     /gene="argB"
                     /locus_tag="RPW04_000867"
     CDS             16256..17098
                     /gene="argB"
                     /locus_tag="RPW04_000867"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HDX6294964.1"
                     /translation="MLKSIRTAEIILSALPYIQKFRDEIFVIKYGGAAQIDEKLKNNF
                     ARDIVLLQLVGIKAVIVHGGGKKINSFLERLNLKSEFIDGLRVTDKDAMEVVEMTLSG
                     LINKEITSLLNKHGARAIGISGKDDNMLKAKSLDDGKYGFVGEITDVNENVILTIIND
                     GLIPVIAPIAIGSEYETYNINADLCASAIASKLKARKVIFLSDIKGVLDKDEKLISKL
                     NETSINELKNNGAISGGMIPKIDACLECIKSGVGAAHIIDGKIPHSLLLEIFTDEGIG
                     SVIK"
     gene            17095..18837
                     /locus_tag="RPW04_000868"
     CDS             17095..18837
                     /locus_tag="RPW04_000868"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDX6294965.1"
                     /translation="MIVLSTTPDEKIANKLAKELVDKKAAACVNCIKDLKSFYTWKNE
                     VQNDSEVLMMIKGNYKKIKDVILKNHPYETPEVIAIKPKKIEKSYKKWLEKSTKISPM
                     LVGTRLNNNEEVSCVSLSEALLQPAAKHGGLYAPINLPILDDNFFKKASKLKYDEIAM
                     MVIKKFKFDIDKDIFKKALKRYAKFDKEAVEIKKLNKNLYINELWHGPTRAFKDMALQ
                     PFGVILKELAKQNNKKYLIMCATSGDTGPATLNTFSDVQNIKVVCIYPKDGTSEVQRL
                     QMVNQKGKNLKSIGIKGNFDDAQKALKALLNDKSFKNELSNLGLNLSAANSVNFGRIL
                     FQIIYHIYVCIKINSNKKPIDIVVPSGNFGNTLGAYYAKKMGANIGKIKIASNANNIL
                     TELFTTGIYNLQDKKLIQTISPAMDILISSNVERLLFDKFGSIRTKELMDSLKNSGFY
                     KLAQEELEELKADFEADFCSDEECENYIKNVSSKGILIDPHTATCLKLVDNDKLSVIT
                     STAQWVKFTPSMVKAIKNKPTQDELVDMKELAKEFDVKIPKSILELFSQKELHKDVIE
                     QDKIKSNIINWLKK"
     gene            18834..>19379
                     /gene="kdsB"
                     /locus_tag="RPW04_000869"
     CDS             18834..>19379
                     /gene="kdsB"
                     /locus_tag="RPW04_000869"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HDX6294966.1"
                     /translation="MIIIPARLASTRFEHKILRTIDGVPMFVKTAMNAKNADNVLIAC
                     DDEKVANIAKSYGLDAILTNVNHESGTDRINEAADKFNLKDNEIIINVQADEPFFEVE
                     NLIKFKDFASKSIASGSFMASCFKLVKKEDAQNPNLVKVVLDTNDNALYFSRSLLPYP
                     RNECEVFKAHIGIYAYSVVNLK"
BASE COUNT         7451 a         2876 c         3329 g         5723 t
ORIGIN      
        1 aaattttatg gtaaatgatt atatcaatat ttagtaaatt tagaaaaaat ctatatttaa
       61 atttgaaatt atttatgcta taatccgcaa atggaaaaga aactgcacaa tccaactctt
      121 agagttctat agatatttaa agtacttttt gtaaacaaca acggacttag tttttctgaa
      181 atttcacaaa taacaggtat atcaaaaggt actcttcatc ctattttaac aactctcatt
      241 tatgaagatt ttttacaaat aaatgaaaat aagataaata tcggcaaaaa ctgttttaaa
      301 atcggaaacg cttacgtgca ttcgctagat tttatagata ctataaaacc tcatatgaaa
      361 gatatagtct ttgtttgcgg cgaaatatgc caactaggcg tacttgacgg gtcagatgtt
      421 ttatatatag aaaaaacaga accaaaacaa gccatcaaat tagaatcata cgtaggaaaa
      481 aatctacctg cgtacgctac tgcgctcggt aagtgcttgc ttagcggatt aaatgatgat
      541 gagataagaa agctatattt agataaaaac tcatttcaaa aatatacaca aaatacagtt
      601 tcggatataa gctcactttt aaaacaaatt tatgaagtgc gggcaaatgg atacgcgcac
      661 gaaatagcag agagcgataa agatatagaa tgcgtggcgg ttcctcttag atctgatgga
      721 aaaatcatag cttcaattag cgttagccta ccgatatatc gatcaaataa tgaaaaaatt
      781 cgctctatta tagaaatttt aaaacttcaa gccgctctta tagaaaaaga aaatagccta
      841 atttataaat caaaataatt caaatttatc aagtttctca tatagttcgt atatacaaaa
      901 ttaaatataa aataattgaa cataaattta tttttaatat accgtataaa gtgtttcatt
      961 tctacactat ttatgataat tatttgcgat tttattgaca ttatagtata aatttgttac
     1021 tatattttat cgtatattaa atattagttt gtatatacga taaataaatt agaaagatga
     1081 atttatgaaa agtgttatat atactcctac cgtaacgatt ttcgatgatg agcaaaatat
     1141 agatttaaaa gcaaatgcaa gacttttgga gtatctttgc gaatttagct tagatggatt
     1201 tgtgcttttt ggaagtaccg gagaatttac agcttttgat accgaacaaa aaaagaagct
     1261 catagattta tacttaaaaa tatcaaaata tccactattt gtaggaacag gctctttaaa
     1321 ctttaaagag tgcgtagaac ttagcaatta ctctatagat aacggtgcaa aaggcgtttt
     1381 agtagtatct ccgtactatt acgccgcttc gcaggaaaat ctttttgact actatgataa
     1441 actagcaaaa atggtgcatg gaaacatatt tatatataat tatccggcta gaacaggaaa
     1501 tgatataagc tcaaaaacag ttttaaagct tatagaacga aatacaaata taaaaggtat
     1561 aaaagatact actcctatgg tttctcatac aaaagagata atagaagcaa caaaacaaca
     1621 taatttcagc gtatactccg gttttgacga tcattttgta gataatattt ttgctggcgg
     1681 agtcggctgt atatctggat tatcaaatat agccccggac atatggacaa agcttgtaaa
     1741 atctgcaaat gataatgatt ttataaattt aaaaaactgt tcatcggcca taaataaact
     1801 aatgcaatta tatacactag acactaattt ctcactaata tttaaaaagc ttttaaattt
     1861 aaatggatta aatttaaatg aaaatgctat ttttccgttt aactctttag acgagattaa
     1921 atttgaaaaa gcaaaaatga tattagaaga tgcgagaagg ttagtaaaat gaacgctatt
     1981 cacgtagatg aaaaggataa tgcggcaact gctttaaagc tcattcaaaa aaacagtgta
     2041 gaacttggcg taacgataat agaagatatc tcaaaagggc ataaattcgc tacaaaagat
     2101 attaaaaaag gtgaagctat aataaaatac tcatcaatca tcggcatagc aaatcaagat
     2161 attaaaaaag gcgcatggat acatgtacac aatatcgaag gtactagagg cagaggagac
     2221 ataagtggaa atttacatat cgcttctcaa aaattaaaaa ataagaaaca agcagcgtca
     2281 aacgataaaa aatacgagct tcaaggctat agacgaagcg atggcagctt tggacttaga
     2341 aatcatattt taatccttcc tagcgtacat tgcgcaaata aagtagtaga aaagatagca
     2401 gctgctataa actatggttt aggactagga aatgatgagt gcaaaatagt atatgtgact
     2461 catcaacacg gatgcagcca gcttgaattt gatgcaagac agactatgga tacactggtt
     2521 ggaaatggtg caaatccaaa tgtttatgga gttttagtaa taggacttgg atgtgaagta
     2581 ataagcgctc aaaacgtggc aaaagagata aaagatagag caccttataa ggaagtggag
     2641 tattttacca ttcaacaaag cggaggaact agaaaaagca tagaaaaagg tataaaaata
     2701 gctaaaaata tgctacaaaa tgctcttaaa tttaaaaaaa gtcgcggtga tttaagcgat
     2761 ttgattttag gtactgagtg tggaggaagc gatagttttt caggtttaag cgcaaatcct
     2821 gctttaggag tagctagcga tatagttata caaaaaggcg gcagcgttat cttagctgaa
     2881 actacagagc ttataggagc cgagcatata ttagcggcta gaagtataaa tgaagatata
     2941 aaagaacaag taatatctac cataacaagc tttgaacaaa gagttttgga ttcaaaagca
     3001 gatataagag gagcaaatcc tagcccgggc aacatagaag gaggattaag ctcaatcgag
     3061 gaaaaatctc ttggctgcat ttacaaagca ggaaatcaac cggtaataag cgtaaaaaga
     3121 tatgcgcagc ctatcaccca aaaaggtctt actctaatgg atacccccgg aaacgatata
     3181 gagcagttaa gcgcaatggt tgctggagga tgtaatatat gtgtatttac tacaggaaga
     3241 ggaacgccta caggaagtcc cataactccg actataaaag tatcgtctaa tagtgccatt
     3301 tatcacaata tgaatgacgc tatagatata aatgcaggca gcataataga cggtcaaaaa
     3361 aatataaaag aggtaggtga agaaatttta gattttatag ttgccatctc aaacggaaaa
     3421 ctcacaaaag ctgaacaaaa tgaccaaaac gacttttcgg tatggcggct tgccacaacg
     3481 gtttaactaa atttaaagga taaaacatgg atctaaattt aaaagataga gttgtcatag
     3541 ttactggcgg cgcaaaaggc ataggagcgg gtatatctct tggattggct aaagaaggtg
     3601 ctattcctat tatactatct agatcaaaag cgtcaaatga atttgaaaat agcttgaaaa
     3661 gtttaacttc taaatttgaa tttattcaga tagatttaaa taatacagac gagataaaac
     3721 cagttatcga ttatgccgct aaggaatatg gaggaattta tgcagtagta aataacgcag
     3781 gagcaaacga taataaagat ttagaatcga caagctggat ggaatttgaa aaaagcttgc
     3841 attcaaattt aacccattat tatgaagtcg ttcatagctc gcttccgtac ttaaaagcaa
     3901 gcaaaggctc catactaaat atcagctcca aaacagcact tacaggacaa ggcaaaacta
     3961 gcgcttacgc tgctgcaaaa ggagctatac tagctcttag tagagagtgg gcggcggctt
     4021 tggctaaaga tagcgtaaga agcaacgcga taatagtagc ggagtgctac acgccgcttt
     4081 atgaaaactg gataaaaaac tttgaaaatc cagaagccag actaaagctg ataacagaaa
     4141 aaattccatt tgaacataga tttaccacag tcaaagagat agccgatacg gctatttttt
     4201 tattatccga attatctagt catactaccg gtcaatggat atttgtagac ggcggatacg
     4261 tgcatcttga tagagcatta taaaggagaa aatatgcaaa acaaaaatat caaaataact
     4321 tttatactag ttacgtctct atttttgcta tgggggctta gttacggact tttagacgtt
     4381 atgaacaaaa actttcaaac tcatcttgga atcacaaaag caaactcggg acttctacaa
     4441 gctgcgtatt ttggtgcata ttttatcatc gccataccgg cttcgcttat agctagtaaa
     4501 tatagttata aagtcggtat catagtagga ttgctgcttt atgctattgg atctttgatg
     4561 ataattccgg ctagcaatag tgcgaatttc gatctattct tactttcatt ttttatctta
     4621 gcttgcggac ttggaagtct tgaaacaaat gcaaatccat acatcacaaa attaggaagt
     4681 gacaaaagag cctcttttcg cctaaattta gctcaaagtt ttaatggcgt tgggcaattt
     4741 atcggaccga taatcggcgg aagtctattt ttatctttaa gtcatggaaa tttggatgaa
     4801 aatatgaaaa acgtacaaat ggtatacgta ggaatagcgg ctatagtctt gtttatcatg
     4861 ctgcttttta taatcattaa aatgcctgag ataacaaacg aagatgaaaa acaacaaaat
     4921 agcggaggat ataaagatct attaaactat aaacacttta aaataggcgt tttagcacaa
     4981 tttttatatg tagctgctca agtaggagcc ggagcttttt ttataaatta ctcagtagaa
     5041 cactgggata ctcttagtga tgctaatgca gcttggtatc ttagtacggc tttagtagca
     5101 tttatgatag gaagagtcgt aactactcca tttatggtaa aatttagtcc aaataacgta
     5161 cttggaatat atgcactcat aaactctatc atcataattt tgctttatat attaagcgga
     5221 cctataagcg tatatgctct tatagctatg tttttcttta tgagtataag ttttccgact
     5281 atatttgctt taagcatagt aaatatacct tcaaatttag taaaacctgc ttctagcata
     5341 cttgtaatga gtatagtagg cggcgctata atgcctttta ttatgggtaa aatagcagac
     5401 gtaacgcatc aaactgccgc tggattttta gtattatttc cgtgcttttt atttgttgct
     5461 tggtatggat ttaaaggaag caaactagat taatttaaat tttaaaaagg ttaaaaatat
     5521 gcttgaaata gtagatactc actttcatat ctgggattta gatatactgc atttaccttg
     5581 gctaaactct tataaaggag ttataaacag aagttttgat atagatgata tatgcaaagc
     5641 ttatggcaaa tacgatctct gctttaaagg aggaatttat gtcgaggtgg attgcgatga
     5701 tagggtaaaa gaggatgaac atatatttag tttaaacagt ccttttatat tagccaaaat
     5761 tatgagagca aaactatgtg agcatatgag actacctctt ggaatagcag gagttagaga
     5821 acctttgcat atagatagct ctaagcgcgg aagatgctta gagaaaagtt tcatatccgg
     5881 gcttgaagtt ttaagccaaa tggatctgat atttgaaagc tgtaacagag ttgatgaaat
     5941 agaagatatc tatagtgctc tatctttagt tcctgattta aaagtagtga taaaccactg
     6001 cgcaaacgta aaagaactaa atagcgaata taaaagaaca atgtctaaaa tagcaaaact
     6061 tccaaacgca tatctaaaaa tttccggatt tgcgaccaac gataaaagtt ttgtaaaaaa
     6121 tcttcttaac tttgtaaccg gagaattcga taaaagtaaa cttctatatg cttcgaattt
     6181 cccggttgtc gagctgtatt caaatttcga cgaacattta caaatcttaa gagagtactt
     6241 cgcagacgac gctgattttt tctcaaaaaa cgcaaaaaaa ctctacaaaa tcaacaaaac
     6301 acagaaattc gcaagtgtga taaaaataag aaaagacaaa atcgatacct acaaaaaact
     6361 tcatgaaaat ccgctatcag gagtaaataa aatgataaaa gagtgcggta taaccagata
     6421 tgagatttat catagagatg atatgctttt ttctattatg gagtacaacg gagatgattt
     6481 tgattatgat atgacaaaaa tggctaatga tgaagctacg aaagaatggt ggaaattaac
     6541 tgatccatgc caaaaaagaa tcgaagatgc taaaaaagat gagtggtggg cagctatgga
     6601 tttagtttat cgactaaaat agttttaaat ttaaagaaat tctcaacatt aagtctaaaa
     6661 tttaaaaaaa atactttaaa tttacgataa aaaatggtag aatatactaa atttaaaaaa
     6721 ggagcatgca gatgacattc agtgttaaaa gtccaatatt aggttttgaa ggtattaaaa
     6781 acgtagaaat tacaaagatt gatgattttt ttgttaaaat gcaagacaaa gacggagata
     6841 cgtcatttac tatgataaat ccatattcac taagaaatta tgaatttgat atacctacat
     6901 actatcaaga tttaatgcaa ataagcgaca aaagcgaatt acaagtatat aatatgctag
     6961 ttatttctag ccctatagaa gaatcaagcg taaattttat ggctcctata gtttgtaata
     7021 ctacaaatat gactctttcg caagttatac tagatcctgt gaattaccct cagtatagtc
     7081 aagctgaaaa aataagcacg cttcttaaaa agaaataatt tagtggcaaa agccactaaa
     7141 ctactatgaa acatgctttt acggtattag agcttatctt agttattgtt atagtaggaa
     7201 ttagcacggc agctgtacct gcactagtga tgtccagcac aaaaacaaat gaagctgttt
     7261 tactacaaga agccataacc tcatcaaaaa caaaactctc tcaaatatta ttatatcctt
     7321 ggaacagtgc gttgaatcaa tcaaactcaa atacatcgtc tttccctatc ttaaaaacat
     7381 catctgtaga caatctggca gaaaaaagac cgggtttaaa tagcttttat aacaaaaggg
     7441 atattacaag attaaaggat gatggcacca cagaagaagt caatgcagaa atcgtaggaa
     7501 ctgctgctaa aaaagaagga ataaatcaat ttgatcaaga caaaggaagt atagatatat
     7561 caaatccaaa attcaatgag cgtaaaaata ttctaaaatt agattatacc gtaacagtaa
     7621 gctatcttta cgtacctgac aatgaaggaa atctagaagg agcatatact aaaaatacaa
     7681 caaatgaaat ctcagtaaag atagaaacga cagcaactct ttcagataag aaaaaaaacg
     7741 tagtaatgag agcttatagt tttaatatag gaacgcctaa gattattaca aaatcttttg
     7801 cgaatagtga gtttaaataa tgaaacgcgc atttactatg atagaactag tcgtagctat
     7861 agtaatttct ggtatattgc tatctatagg agttaaaata tttgatgtaa tttatacaaa
     7921 ttacattaga caaaaaagta tagtagagct agaatctata tcaaaaacag ttatagagca
     7981 gatagaaaaa cgactatcat accgcataaa accgacttta tcagtaaata tagaaaataa
     8041 atataagcgt ttagacaaac taacggatga cgatataaag actaataaaa aatatccgat
     8101 tatatggtat atgcaaagct atgaaacaca aagaatattt aacgatgata aaagaatact
     8161 cggctggagc ggatttataa atttagataa agataaaaca catccagata aaacagataa
     8221 aaatgaagaa gtactaacta tcaactcacc gggaagtaat ttttcaaaga ttgaaaatat
     8281 tataaaagat ttgggtttta gtgatctttt tatagtattt aaagtagatc agggaaacaa
     8341 caatgatcaa tactataata taaaatcaga tgataaaaat cctttagcac ataaaataaa
     8401 aattaaaaat gatacgaatt taaatataga taaaccgaaa tttcttgaaa agaaagatac
     8461 taataaatta gaaatatctg agctatacta tctatctcac tccataaatc aacttagtat
     8521 agataaggat aacaatcttt ggctaaccga atttattcca tttggaaatg ataatggaac
     8581 gcacaaagaa gttaggaaaa acgtattagc cgaaaacgta agctcactta gatttatgta
     8641 tctaggcgga agcgactcta tctctataaa actctgctta gaagatccaa attttaaaat
     8701 aaaaggtcaa aaattagaag tttgtaaaac ccaggtggtg cagtgatgaa aaaagctttt
     8761 agtttgatta tggcgatatt ttttgtagtt atgcttggga tagtaggaac tcttacatca
     8821 agaatcatag ccggaggtag caaagagagc gcggatttat atctatatga acaagcaaaa
     8881 cttttagcta ttagcggaac tgagtacgct atactaagaa ttcaagaaaa agactttaaa
     8941 gaaggctgta acaataattt cactttatcc tatccaacaa aagacaaacc catttttaca
     9001 attactgtag atgtaacgta tataggagca aatccgccta ccaagtgtac agaatggata
     9061 gattctggta ttacacaaga taaagacggt caagagctaa aagacgctga tggaaaacct
     9121 aaaacttcta tccaagcagt catcttagat acaagcgtaa tctcagacgc aagtattact
     9181 caagaacaga tctccataaa gcgtacaact atccaaaaac cgtgatttta tggtataata
     9241 tattaacttt attccaaagg agcatgaaat gaatacaagt attgtaggaa aacaatttga
     9301 attaacacaa gctataaaaa actatataga taatgcattt gagtcattat ctaaatacaa
     9361 tcttgatatt atttcaagta gggttatcat atcagcagat gaaaaacaag gtaaaaaagg
     9421 ctttgatgtt gaatttgcta taaaccttgc aaaaaaagat acgatcgtca taagacaaaa
     9481 agataaagat ctttacgcgg ctatcgattt agcggttgat agagcaagca aagttttacg
     9541 tagacatcac gataaactaa caacccataa aaacaaagat gatgaaaaag caagtataaa
     9601 cggtatcata gacgaacctc atatagatgg agtagacgag atagttccgg ctgaacttga
     9661 actttataag cctattgaga tagaagaagc tttagaaaaa ctaaaaaact caggtgcaca
     9721 attttatgta tttaatgata tggaagccaa aatgcgtatc atttataaaa gaaacgacgg
     9781 caaattcgga ctttattaga aaagtttgct ttctggggta ttaactccgg aaagcttttt
     9841 ttaaatttat atattaattt tgatattttc ttactatatt ttttacaact ctacttatca
     9901 aatccactga atttatctca caacactcat tgatactatg aggcgaataa atatttggac
     9961 caatcgaaca agcttctaaa ccgctcgctt tgatagtaaa actccgcact caagtcctgc
    10021 atgaacagct tcaaatttaa catttttatt aaattcttgc atagaagata atacttcttt
    10081 agcaaaatca gtaaccttag gtgtccaagc cctgctctct tcggcaaaac gcacatcaaa
    10141 tccagccatt ttagctaaaa cttctgtttc ggatttaatt ctttcaagcc ctaaatcgct
    10201 catagatctt gcaaaaaatt ctatttctaa catattttta tcttgcttta taatagacaa
    10261 atttatactc tcattgacga tttttaaact ctcatcataa cttcttactc cttgagcaaa
    10321 tgaatttata aagctcaaaa tacaatccga atttttcagc acaagtgcat cttttttacc
    10381 tagttttttg acttttatta gactattacc ttgcaaattt aaatcatcac aaatcacagt
    10441 agcaacggct tttaccggta tagaattatt tctttcacca ccatttatac taactatttt
    10501 tgctttgctt ttagctaaaa aatcggctaa aagttttata gcgtttggta tatcttttac
    10561 tatttctata ccgctgtgac cgccttttaa tccacttatt tctacttcgt aaacattatt
    10621 tatttcattt tttgtttcta ttttcgaact agcaaaaata ccaactccgc ttgcgcatcc
    10681 tataaaaaca ccgtcttcat gctcgctatc taaatttaaa atccgtccgc ttactaactt
    10741 agtattaaat ccgtttgcgc caagaagccc tacttcttca ttgtttgtaa ataaaacttc
    10801 aagactctcg aattctctca tcatatccat aattatagct acgccgattc cgttatctgc
    10861 acctagagtt gaattttttg cttttaaaaa accgttttct tttatgatct ctatatttgg
    10921 agcatctcct acgcaaacca tatcataatg agcctgtaaa cagatatttg gcttaccttt
    10981 tatagcatat atattgccaa actcatcgct atttacgcta aatccgctat cttttgagaa
    11041 ttgcattagg tactctttta atttatctgt ttcaaaactg caatgcggaa tagagcaaat
    11101 ttcattaaaa taatcaaaaa ctttcatttt ataatgcctt tgcatatttt ttaacaaaaa
    11161 ttatagcatt ttaatgataa tatatcggct atgaaacgta tcgttagttt tgttattttg
    11221 gtttttttgt tacaaggttg cctttggata aatgaacgcg gtatctcaaa taaatattat
    11281 aacgactgca aagagtacta tgacggagcc ggaatttatc ataaaaaatg cgacgaaaat
    11341 ctcttggatt ggtcaaatga atctaataaa taatgcaaac aaaaagcttt ttgaaaaaat
    11401 aaataatctt aaaaattata gctgtcaagt taaattcagt gatgccatag agatagaaat
    11461 aaatgatttc gatgataaca taatagatct tgcaaaagac cttaaaccat ggagaaaagg
    11521 tccttttaag ctaaatgcta cacttataga tagcgaatgg caaagcttta taaaatttaa
    11581 tgggctcaag ccttttttaa atttaaaaga taaaattgta gccgatgtag gctgcaataa
    11641 cggatattat atgtttaaaa tgctagaact tgagccaaaa agcatagtag gattcgatcc
    11701 tagcgtactt agctttttgc aatttagttt tataaatcat tttgtgaaat caaatatcaa
    11761 atttgagctt cttggagtgc aagatttacc taattataat atcaaatttg atacgatact
    11821 ctgtcttgga gttttatatc atagaagtga tcctataaaa acgttaaaag agttaaaaag
    11881 tagcctaaag aaaggcggtg aagtatttat agatactatg tttatacaaa gagacgatga
    11941 gtttgtctta agtccgaaaa gcacctactc aaagatacca aatatctatt ttatacctag
    12001 tataaaagct cttagaaatt ggtgtgagag agctaagttt aaaacttttg atatactcag
    12061 tattaaaaat acggatttta acgagcagag aaaaacacag tggatatacg gggaaagttt
    12121 ggaaaatttt ttagatccaa acgatcctaa attaactata gagggttatc ctgctccaaa
    12181 acgtgtttat gtaagattaa gttaaaaggt agtttaatgg ctgaaaatgt ctatagtgat
    12241 agcataaaag atagcgcaac ggtgatagat gaaagtctat ttcaaaattc tttgaatata
    12301 cctcaggcga taaatacgat cttcaacgga agtataatag acgccaagca aaactactca
    12361 aaaacagttc taaaaacaaa taatgatatg atatatgacg atgaggggct tattcacagc
    12421 ggatttatat ttagcgcggc agactggtct gctcaagtag cagtaaatca gccttttagc
    12481 gtaacaatag gttctaaagt aagctttttt gctccagcta aagtaggaga tatcatagaa
    12541 tttgaagcac atgcttattt tgacgaatcc aaaaaacgag aaataaaagt tataggaaaa
    12601 atcaaagaaa taaaggtttt cgaaggaact tttcaaatag tagttttaga agatcatata
    12661 tttaaacttc agaaaaaaaa caaagaaaaa caaaatgagc aagcagcctc aaaagctgct
    12721 aaatagcctg catccagcgt tttaaatttc gtctttcact ctctaagcta gtttgatctc
    12781 catgtcctgg atatagcttg aagtctttga aatttaaaac cctctcaagg ctttttctca
    12841 tttcaacagc atttgaaaaa ggaaaatcat atcgtccaat agagttttta aatataaaat
    12901 caccactaaa cataacatct cctatctcga tcatagaaca tccgggagta tgtcccgcaa
    12961 aatggtgaaa tgtaaattta aaactgccta tttctatgat ttgattatct tctactaaaa
    13021 aatcgggttt aaaggtagtt tgcaaatatg taaacggatc ttgttcacat aaaaaagcgt
    13081 cgtcttttgg tatataaata ggtattttaa atttatccct tatcgcatta tcatcataaa
    13141 tatgatcaaa atgtccatgc gtatttaaaa tagcaagcgg atttttgcaa actttactca
    13201 cccattcaaa agctccatcg cctggatcga ctataacctc accggattca tttattaaaa
    13261 tgtaacaatt tgtatcataa attccaaaag actttgataa aatttgcatt ttcccctcct
    13321 ttgcccacaa gagcgaatta aaagttttat tttaacattt tttcgttata atgcaactaa
    13381 tttcttatag gtaaatttaa tgaaagattt taaattttta gaaaataaat tattatgctt
    13441 tttagataaa tatttaaaac aatccggtgc tagcggattt agcataggag tgagcggcgg
    13501 acttgactct gccatagtcg ccacgttatg ttcaaaagta gccaaaactc acgctctttt
    13561 aatgcctaca aatagctcaa ataatctaaa tttagaagat ggtttaatcc tatgtgaaaa
    13621 gcttgattta gagtatgaag ttataaatat agaaccgatt gtacaaagct ttatatctgt
    13681 tttagatgtt acggacaaac taagaaaagc caatataata gcaagagtta gaatgatact
    13741 attatacgac aactcggcta aattaggcac attagtagca ggaacaagca ataaaagcga
    13801 gagactactg ggctatggaa ctatatacgg agatacggct tgcgcactaa atcctatcgg
    13861 agatatttat aaaagtgacc tatttttgtt tgcaaaatac ttagaaatag atgaaaatat
    13921 aataaataaa gccccaagtg cagatctttg ggaaggtcaa aaagacgaag atgagattgg
    13981 ttttgcttat tctagcgttg atgccgtgct aaaagaattt gaaaaaaacg atcaaagaga
    14041 gaatttatac gctattttta acaaaaattt agtagatagc gtacttgata gagtagaaaa
    14101 aaatagcttt aagctaaatc cggtaccgat tgcaaatatc agttaaataa aggatagaga
    14161 tgagagatat agcatttttt agaccatata ttaccgaaag agaacatgaa ctagtaaaag
    14221 agagtcttga taaaaacgcc gtttatatgg taacaaattt agaagataac ataaagaagt
    14281 atttcggggt aaaacacgtt ataactacaa ataacggaac tgcggcaaat catttagcac
    14341 tttgtgctat ggatcttaaa agaggagaca agataatttg ctcagtaaat gcttttccta
    14401 gcatagctca agtcatccgt cactttgatg ctgagccgat atttgtagat atagacgaag
    14461 atgattttaa cataagtccg accgagctag aaaaggtatt aaaagaacaa aaacataaaa
    14521 aactaaaagc cgcattcata actcacgtcg caggacaaag tgcggatatg gataccatat
    14581 atgctttagc aaaagaaaac ggtataaaaa tcatagatga tgctagtcgc gctatgggtg
    14641 ctacatataa aggaaagctt ataggaaatt tagactcata tatgtcttgt tttcagataa
    14701 atcctcaagt acaacatgct attgcatcaa ctggtattat attgacaaat gacgatgaga
    14761 tggcaaaacg cgccaggctt ataagaaatc acgcaatagt aaatgatagt tttgataaag
    14821 atggaaattt aggatatgtt tatgatgtag tagatatagg acaaaaatat gatttaaatt
    14881 ctctttgcgc tgcttttagt atagctcagt ttgaaaaact agagatattt ataagaagac
    14941 gaaaagaaat agcagcaata tataatgaag agttaaaaac atgcccgcat ataactactc
    15001 ctgttataaa aagagatcat atatataatc aatacataat aaaagtagat aaaaacagag
    15061 atggcttcgc aagagagtta aaagatgcag gaattcatac aggtcttcac tacataccgc
    15121 ttcatctgct aagctattac aaaacaaaat acaatcttag ggtaaatgat ttcccaaaag
    15181 cattaaaggt atatcaacaa gtgctatctt tacctatcta tgccgctatg agtaacgatg
    15241 aagtaaaata tgtttgtgat acaataaaat cagtagcaaa aactcgtgtt tgatagaaaa
    15301 ctgcatagct ggataaatag atatttttat cgtccaaggt atcttgaaac gctaatttct
    15361 atggctttaa gcccgttggc tttgatatat tatattttag tagttattaa atttagactc
    15421 tcaaaacaga tcaaatttga tatacctata ataagtattg gaaatttaat agtcggcggc
    15481 acaggcaaaa ctccgcttac aaaagctatt tttaatgaat acaataccaa atttaaaact
    15541 tttatcatat taagaggata taaaagaagc agcaaaggta tgctaaaagt ctgcatagat
    15601 ggtgaaatat tatgcagcgt agatgagagc ggcgatgaag ctatggagta tgcgttaagc
    15661 cttaaaaatg caaatgttat agtaagcgaa aatagaaaat tagccataga agaagcgata
    15721 aaatacggcg cagagcttgt tttgcttgat gatggatttg gaaagtttga tatttttaaa
    15781 tttaatatta ttttgaaacc tactatagaa cctattttta aactagtttt gcctagcggc
    15841 gcatatagat atccaaaaag tttttataaa tttgcagatt ttattccgac aaaagatgat
    15901 ataataagct ctaattatat aataaacaaa acaacgaata tggttttagt aacagctata
    15961 gcaaatccat taaggttaaa aaaactattt gatagctgct taggtataga gttgtttgaa
    16021 gatcatcata aatttaaaaa atcggaaata gaagatatat ttaaaaaatg gaatgcaaca
    16081 actattttgg tgacccaaaa ggattatgtt aaaatacgag atttcggctt taatgtttcg
    16141 attttagaat tgcgtactga aatttcatct caattcaagc taaaattaga taagtttata
    16201 gataattaca accagaatat gataaaataa taataaaatc aattaaggaa aagttgtgtt
    16261 aaaaagcata agaacagctg agataatatt aagtgccctg ccttatattc agaaatttag
    16321 agatgaaatt tttgtcataa aatacggcgg cgcagctcaa atagatgaaa aattgaaaaa
    16381 taattttgca agagatattg tgcttttaca actagtaggc attaaagccg tcattgtaca
    16441 tggaggcgga aaaaagataa attcattttt agaaagacta aatttgaaaa gtgaatttat
    16501 agacggctta agagtcacgg ataaagatgc tatggaagta gtagaaatga ccttgagcgg
    16561 acttataaat aaagaaataa caagtctttt aaacaaacac ggcgcaaggg ctatcggcat
    16621 aagcggcaaa gacgataata tgttaaaggc aaaaagctta gatgatggaa aatacggatt
    16681 tgtaggagag ataacagacg tcaatgaaaa tgttatatta accataataa acgatggact
    16741 cataccagtc atcgccccta tagctatagg aagcgagtat gaaacatata acataaacgc
    16801 agatctttgc gcaagtgcta ttgctagcaa attaaaagct agaaaagtta tatttttaag
    16861 tgatatcaag ggggttttag acaaggatga aaaacttatc agcaagttaa acgaaacttc
    16921 tataaatgag ttgaaaaata acggagcaat cagcggtgga atgataccga agatagacgc
    16981 gtgtttagaa tgtataaaaa gcggagttgg tgcagcacac ataatagatg gaaaaattcc
    17041 tcactctttg ctgcttgaaa tatttacaga tgaaggtata gggagcgtta taaaatgata
    17101 gtattaagta caacaccaga tgaaaaaata gcaaataagt tggctaaaga gttagtagat
    17161 aaaaaagctg cggcttgtgt gaattgtata aaagatctga aaagctttta tacttggaaa
    17221 aatgaagtac aaaacgactc tgaagttctt atgatgataa aaggaaatta taagaaaata
    17281 aaagatgtta ttttaaaaaa tcacccttat gaaacaccgg aagtcatagc tataaaacct
    17341 aaaaaaatag aaaaaagcta taaaaaatgg ttagaaaaaa gtacaaaaat atcacctatg
    17401 ttagtaggta caaggttaaa taacaacgaa gaagtttctt gcgttagttt aagcgaagct
    17461 ttattgcaac cagcagcaaa acatggcgga ctttacgcgc ctataaattt acctattttg
    17521 gatgataact tttttaaaaa agcatctaaa ttaaagtatg atgagatagc tatgatggtt
    17581 attaaaaagt ttaaatttga tatagacaaa gatattttta aaaaagcatt aaaaagatac
    17641 gctaaatttg ataaagaagc agtggaaata aaaaaattaa ataaaaattt atatataaat
    17701 gagttatggc acggacctac aagagcattt aaagatatgg cgcttcagcc ttttggtgta
    17761 attttaaaag agcttgccaa acaaaataat aaaaaatatc tcattatgtg tgcaacaagc
    17821 ggcgataccg gacctgccac actgaataca tttagcgatg ttcaaaatat aaaagtcgta
    17881 tgcatatatc caaaagacgg cacaagcgaa gttcaacgct tacaaatggt aaatcaaaaa
    17941 ggtaaaaatt tgaaatccat agggataaaa ggtaattttg atgatgctca aaaagcctta
    18001 aaagcgctat taaacgataa atcttttaaa aatgagctat caaatttggg gcttaactta
    18061 agtgctgcga attctgttaa tttcggcaga attttatttc agattattta tcatatctat
    18121 gtttgtataa aaataaacag taataaaaaa ccgatagata tcgttgttcc aagcggcaac
    18181 ttcggtaata ctttaggggc gtattacgct aaaaaaatgg gtgcaaatat aggaaaaata
    18241 aaaattgctt cgaacgcgaa caatatatta acggaacttt tcacaacagg aatttataat
    18301 ctgcaagata aaaaattaat tcaaactata agccctgcta tggatatact aattagctca
    18361 aatgtcgaaa gacttttgtt tgataagttt ggaagtatta gaacaaaaga gcttatggat
    18421 agtttgaaaa acagtggatt ttataaactc gctcaagaag aacttgagga gctaaaagca
    18481 gattttgaag cagatttttg tagcgatgaa gagtgtgaaa attatataaa aaacgtttca
    18541 agcaaaggta ttttgataga tcctcatacg gcaacttgcc taaaactagt tgacaatgat
    18601 aaacttagcg tgataacatc tacagctcaa tgggtaaaat ttactccaag catggtaaaa
    18661 gctatcaaaa ataaacctac acaagatgaa ttagtagata tgaaagagct tgcaaaagag
    18721 tttgacgtaa aaattccaaa gtccatctta gagttatttt cacaaaaaga gcttcataaa
    18781 gacgttatag aacaagataa gataaaatca aacatcataa attggcttaa aaaatgataa
    18841 tcataccggc tcggctcgct tcaactcgtt ttgaacataa aattctaaga accattgatg
    18901 gcgttcctat gtttgtaaaa accgcgatga acgccaaaaa tgcggataac gtgctaatag
    18961 catgtgacga tgaaaaagta gcaaacatag caaaaagtta tggcttagat gctattttaa
    19021 caaacgtgaa tcacgaaagc ggaaccgacc gcataaatga agcagcggat aaatttaatc
    19081 taaaagataa cgagatcatt ataaatgttc aagccgatga gccgtttttt gaagtagaaa
    19141 atttgattaa atttaaagat tttgcaagta aatccattgc aagcggctcg tttatggcaa
    19201 gctgttttaa actagtcaaa aaagaggacg ctcaaaatcc aaatttagta aaagtcgttc
    19261 ttgacacaaa cgataacgct ctgtattttt cacgttcact tctgccatat cctagaaacg
    19321 aatgtgaggt ttttaaagca catataggaa tttacgcata tagcgtagta aatttaaaa
//
LOCUS       DAPPKW010000027        18258 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.027, whole genome shotgun sequence.
ACCESSION   DAPPKW010000027 DAPPKW010000000
VERSION     DAPPKW010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 18258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18258
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.027"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            74..1135
                     /locus_tag="RPW04_000870"
     CDS             74..1135
                     /locus_tag="RPW04_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HDX6294967.1"
                     /translation="MKLFSKYTGLVYLKYFIIIFMALELFYIGIDTLTNLKDFPKSAN
                     LQLIYLSLTALTAVNYVLPISLVFALIVSKINMIRSNELVSFYSLGISKNTLILSPFI
                     ISLIITCLYIYLSSTSFAYARDYQKSLINFQGFNKSSNSIFLKYENKFIYIDELYPAI
                     GEANKIKIFETQDGDIIGQITAKKAKFEDNSWKLFDVDIISLPPRLELNATGYIENTQ
                     KELLILSGFKPRTIENIYQTNSNYSITDAIDSLRTLKNEGINLNKIKSTLYSLIFFPL
                     FAPLMVLILYYYLPITGRFFNLALASFIYVIVTLCIWGVLFVLIRFSLNGVIIPEIGV
                     ILPIIILASFAGFKFYQHR"
     gene            1348..2559
                     /gene="lysA"
                     /locus_tag="RPW04_000871"
     CDS             1348..2559
                     /gene="lysA"
                     /locus_tag="RPW04_000871"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDX6294968.1"
                     /translation="MDYSLLAKKYGTPLYAYDFDYIQNQYNKLKKEFNARKSLICYAL
                     KANSNLSLLKHIADLGAGFDCVSIGEVKKAILAGAQNYKIIYSGVGKSDEEIEEALNL
                     DILMLNLESEEEMKRVESIAKKLNKKARISVRVNPNVDPKTHPYISTGLSKNKFGVGI
                     EKARKMYLYAHKSEFLDPVGIHFHIGSQLTDLKPVIEAANIVSDLLRELKALDIDIKF
                     FDVGGGIGIRYENEKDPDLYGYAQGILVALKGEDITIICEPGRFLVGNAGVFITKVLY
                     EKINDTHSDDKKRFIIVDGAMNDLLRPSLYEAHHEIIALNSGEKELCDVVGPICESGD
                     FLGKNVNLPKQSSGDILVVKSAGAYGFCMSSNYNSRLRTAEVAVCGGKDRLIRQRESF
                     EDLVKNEKEFI"
     gene            2559..3338
                     /locus_tag="RPW04_000872"
     CDS             2559..3338
                     /locus_tag="RPW04_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002861096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIA family hydrolase"
                     /protein_id="HDX6294969.1"
                     /translation="MYFIDVQGTLISDTDKSPINGACELIEFLNSKNIPYVVITNNTK
                     AKSLDFLANLRKIGLQIKDGAYLDPFCVLEEILPPCNCAMFGATQFVDTMKNLGYKED
                     FKEPKAVLIASWDDFKFSDFASINELVLNGAKLIAMHETSIYKKNGRLYPGVGAISAM
                     INYATGISHEAVGKPSKAFYNEALRLLNLQSSKVEFKDITIISDDAKGDLKGAKEIGM
                     KTSLVLSGKVSDQNKSGVKKDILDSVYKDISEVLKAINAKY"
     gene            3325..4401
                     /gene="pheA"
                     /locus_tag="RPW04_000873"
     CDS             3325..4401
                     /gene="pheA"
                     /locus_tag="RPW04_000873"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HDX6294970.1"
                     /translation="MQSIDELRTKIDDIDDQILSLLNNRMRYVQKIGELKQSSKTAIY
                     RPERERAILSRLESTKDNKLSKEAIEAIYLEIFAVSRNLEMPQKVAFLGPIGTYTHQA
                     AESRFGAMSSYTALSSIEAVFRELDNKEAKYGVVPIENNTEGAVGITLDCLRKYENVK
                     IVAEIYMDIHHSFVSMSENLKDIKKIYSHPQGYNQCRRFLDDHNLNEVTFIPTKSTAE
                     AAFLASKEKDSAAICSKIAAHINNVPIVFDTIEDNLANRTRFFVLSDFKNGKSEHNKT
                     SILAKTAHRPGGLVELLSMFKNEGINLTKLESRPIKQKDFQTVFYIDFEGHIDEENIK
                     KVLELAAKNGHDITWLGSYINQEG"
     gene            4404..5504
                     /locus_tag="RPW04_000874"
     CDS             4404..5504
                     /locus_tag="RPW04_000874"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDX6294971.1"
                     /translation="MKFNSHIENLPIYEAGKPIELVIREFGIDQNDIIKLASNENPLG
                     TSKKVIEKIKNVAQNSSLYPDDSYYELKDGLSNLYKVEPKNVIIGSGSDQIIEFALHA
                     KANGKKGILVSGVTFAMYEIYAKHVGAKIYKTKSKEHNLAEFREIYRTNKNDISVIFL
                     CLPNNPLGECLDADEVFSFIKDVSEDTLVVIDGAYMEFAKFKSSKKEIDPKTLIQTFS
                     NALYLGTFSKAYGLGGMRVGYGIANEEIIKALHRLRAPFNITTLSLAAAIEALKDNDF
                     LKETLENNFKEMKVYEEFAKENSIEFIESYTNFITFIFDQHQNATKICDNLLKQGIIL
                     RNLKSYSMNAIRITIGKNEQNRRVLDMLKKEI"
     gene            5511..7217
                     /gene="fliF"
                     /locus_tag="RPW04_000875"
     CDS             5511..7217
                     /gene="fliF"
                     /locus_tag="RPW04_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HDX6294972.1"
                     /translation="MDYKTLFHQVGQLYQNLTLKQKIVAASSVVIVVGFLVFLSLYKS
                     SSSGSEYDGYSILFRNLNPADSAQIIAQLEKDGVTYKLANEGTILVPTKSVYKERIAV
                     ASLGIMKDGKNGFEIFDKQDFGATDNEQRVKFQRAIQGELSKTIEGLEPIEKATVYIA
                     FPKDSVFTERQVPPTASVVVKIKDGEKLNRKQIDGIKRIVAGSVTNLKAEDVKIVTQD
                     GVAVGDDEIALESELVASQIKYKKEFENTYEQKIIDMIGKFTGGRDKVTAKVSIEFDF
                     SVKDSQSEIYDPNSVIRSEQNIEEKREGKQPKEVGGVPGAVSNIGPVEGLDQNKPDEL
                     YTKNVANTNYEISKKIIKVKDQYATIKRVTAAVVVDGKYEREKKEDGSLSDTIAYVPL
                     SEDEINKIKSLVEQTIGYNSTRGDEVTVSNFEFKKAGNLNANTTKIGIFYDSYLKPLT
                     PIIKYLIVLLILFVFYKKVITPFLQKMVENAKDEDFEPQKEESNIEEEAEDTLEKFKA
                     ARKRVEDELGIGEDFNEDELKYEVLLEKMKLIVSERSKEISTLLQGMIKNDSDFNSRK
                     EF"
     gene            7217..8245
                     /gene="fliG"
                     /locus_tag="RPW04_000876"
     CDS             7217..8245
                     /gene="fliG"
                     /locus_tag="RPW04_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HDX6294973.1"
                     /translation="MTKLNEQQKMIYDDLSMPEKVAILLIQLGEDATTLVFSHMDIDV
                     ITEISRYIASAKTIDKTVAAAVLEEFYALMQSNQYMKSGGIEYAKEILFRTFGPEIAQ
                     KIMDKLQKSMETTKSFGYLSQVRPQQLADFIVKEHPQTIALIVAHMDATSAAETLVYF
                     PDDLRSEVIIRMANLGDISPSVVKRVSTVLESKLESLTSYKVEVGGPRAVAEVLNRLG
                     QKASKSTIGIIEQSDPSLAVTIKEMMFTFEDINTLDNNAIREILKVVDKKDLMVGLKG
                     SGEELKQKFLANMSQRASEAFVEEMQFLGAVRVKEVEEAQRRVVELVQKLAEEGVFQV
                     GESDEMIE"
     gene            8242..9039
                     /gene="fliH"
                     /locus_tag="RPW04_000877"
     CDS             8242..9039
                     /gene="fliH"
                     /locus_tag="RPW04_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002943876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HDX6294974.1"
                     /translation="MKQSNVIDNKNAEHTIEPYRFKVLGAFPTNDVKEQETVSNLEEQ
                     TETQAPKQEVEKESQTHQEEPKLEPSFIEELLKRTDELSGNIIKLQMQIENQENEFKV
                     RLEQEVARTKDEALKEGHMAAKTEFEAELNEIEKKYMHSIEKLDEEKSKLEALYASSQ
                     QELASTAIEIAKEVVIKEIKDSSSVVASNIAKSLISELNDATSIEIKTNPKDYEFLKA
                     NLNLNSHIKITSDDAINAGGVIVLSEVGNIDGSVMARFAKIKKILSE"
     gene            9043..10845
                     /locus_tag="RPW04_000878"
     CDS             9043..10845
                     /locus_tag="RPW04_000878"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDX6294975.1"
                     /translation="MDIKSKSLEELTDLCDTLRDKILKTVSSNGGHLSSNMGAVELSV
                     AMHYVFDVSKDPFIFDVSHQSYAHKLLTDRWNRFDSLRQFNGISGYTKPSESKFDYFV
                     AGHSSTSISLVVGACKAIKLKGENRLPVAVIGDGAMSAGMAYEALNELGDRKYPCVII
                     LNDNEMSISKPIGALSKYLSQMMAGQFYQKFKARVNQFLSYVPDSAAYMAKRFEEGFR
                     LITPGMFFEELGLEYIGPVDGHDLKELISTFTTAKLMNKPVIVHIQTIKGKGYELAEG
                     PKEKWHGVSPFNLKNGQSVNQANQKSATNIFSELLLNLAKKYENVVGVTAAMPSGTGL
                     NKIIEVFPDRFWDVAIAEQHAVTSMAAMAKEGFKPYIAIYSTFMQRAYDQVIHDCAIM
                     RLPVVFCMDRAGIVGEDGETHQGAFDISFLNAIPNLNLVAPRDEESFKNIMEFSYAFD
                     SPLAIRYPRGNFILNNEYKSQKTALAKGEILENGDGSVAFIGYGNGVGKAVQTAKKLN
                     FKPTIVDLVFAKPLDKELLLQIAKTHNKWYVFSDSAKRGGIGEILAGFLQENLLTNIL
                     IKSFEYEDTFIKHGKTSVVEDYLSISAEKISNTF"
     gene            10928..11344
                     /gene="perR"
                     /locus_tag="RPW04_000879"
     CDS             10928..11344
                     /gene="perR"
                     /locus_tag="RPW04_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HDX6294976.1"
                     /translation="MDYMELLKQANLKATPQRLCVLKILDKHTHPTIEELYAEIKRDY
                     PSISLATVYKNLNTLIDEKLVVEVNTPNQKAKYDIYEHPHIHVVCSVCGHVEDVNCDD
                     AKMVEYQEHLEKKIGNLIDRLNIVATTNGCKKCSNC"
     gene            complement(11363..12421)
                     /locus_tag="RPW04_000880"
     CDS             complement(11363..12421)
                     /locus_tag="RPW04_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018713159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDX6294977.1"
                     /translation="MRLLALIKKEILAIKNDKKSMIVVMVPPLMQILIFAFSVTLEVR
                     NLNLAVLNLDSSKQSREIIQKLESAKFVKNIVMVKSLNEAKELLTGQEVFAFLMIPKD
                     FVIRGESLGLVLDGRHSNSAQIVNGYIEQTMISNLSDIQISVRNFYNPNLENFWWIVP
                     NLYGSIVMVMAIVLTSLSISREREIGTFDQIIVSPLKPFEILIGKLLPALILSLLLST
                     IVIFIIRFFFKVPIIGSLWLLYLGSTIFIFSVCGIGLFISALCKTQQQAILGSFVFLL
                     PSFMLSGFVTPVENMPDWLAPISNLLPLTYYVVFTKAVFLKDISFIDSLKYILPMFII
                     GIVSLCITLIFFKKNVLK"
     gene            complement(12418..13491)
                     /locus_tag="RPW04_000881"
     CDS             complement(12418..13491)
                     /locus_tag="RPW04_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDX6294978.1"
                     /translation="MSFKRIFAIVIKESLQAMRDPSTALIAIILPIILLFLMGYAVSL
                     DAKNISFGIVNYSSSKDSKEIISKFAASKFFITKITTDKNELINDMKLNKISGFLVID
                     DDKNSLKFQIITDGSEPNTANLIRQYGSSIIYIWAENLTSKRVLLESRYWFNEKLSSR
                     YFLIPGSIAVIMTLIGTLLTSLVIAKEWERGTMESLMSTPVSNLEIIIGKLIPYFVFA
                     MLSAVICFFVAYFWYEIPFRGSIFILFLLSFIYLFPALLIGLFISTIAKNQFVAAQIS
                     IIVGFLPAFLLSGFVFEISNMPTFIQYLSYFVPATYFVNSLGNIFLVGNLYNVFILDA
                     VYMLIIGFVVGILVLKKSKRSLD"
     gene            complement(13481..15136)
                     /locus_tag="RPW04_000882"
     CDS             complement(13481..15136)
                     /locus_tag="RPW04_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6294979.1"
                     /translation="MIKATNLTRNFDKPFTEALKSINFDAIKGKITGVVGPDGSGKTT
                     LLRLCAGLLTPSSGELNVLGYKMPCSQKDFLNKIGYMPQIFGLYEDLTCEENLNLYAK
                     LQDVQHSKQRIDEILEFTNLKIFKDRLAGSLSGGMKQKLAFGATLLKKPELLLLDEPG
                     VGVDPISREEIWSMAKSLTGVSILWATSYLDEAGLCDKVLLINDGKIIFDDDPKRINN
                     ILENRVFLVEVRGDKKSFLTNILEHDNVLDAYFVGSKIRVVLKTKDCSLFQDFADFKF
                     ENVAPSFEDAFVDMLKIKTKAHSKLTAILNRVDKQDCFALKAIGLTKKFGSFTATDNI
                     SFEISKGEIFGFLGPNGAGKSTTFKMICGLLSRSEGESLIYGNSIDVMKNKIGYMAQK
                     FSLYGNLGLKDNLDFFAGLYGLRGKEKRDKIASMIEIFGFDRYLKNKVFELPLGIKQR
                     LALSCALMHSPLVLFLDEATSGVDPITRKEFWRHIDAISNLGISVMVTTHLMDEAELC
                     DRVMIIDQGKMIAVGAPDELKQRVGAISVKDAFIKLIKGTNEL"
     gene            complement(15120..16103)
                     /locus_tag="RPW04_000883"
     CDS             complement(15120..16103)
                     /locus_tag="RPW04_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HDX6294980.1"
                     /translation="MKKLGVIGVVLVLIFLFYKFYEKEFILKDKDDIFYGNVDTKTVD
                     LSFRFLGEIVDISKIEGAKVSKGEPLVYLDDSYLQNSLNSLKSKINIENINLLKLESG
                     YRIEEIKQSKARLEAAAANLKETQNSFNRQQKLMLSKATSEEAFMTAQTRFEAAKANL
                     NLAQANYELLKNGYQKEDIEAQRELVRYLNINLEAIELDIKNSVLISPYDGILQKRYK
                     EIGAITNANEPVVEIARDDKYFIRAYIDEKNLGKIKLEQKMKIFSDARSEPYLGYINF
                     ISSVAEFTPKNIQTTELRSDLVYKFEVTLIDKDDRLKQGMPVHIKFNDQSN"
     gene            16441..17718
                     /locus_tag="RPW04_000884"
     CDS             16441..17718
                     /locus_tag="RPW04_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294981.1"
                     /translation="MQTIQILIPVFLIGSIILGYLYKTNIGIFAIPLAFIAAFIHGLE
                     VKNIINLWGLNLFFILISMTFFYGFAISNGTLNLLASKAIYVSRNQPWAIPIVLFIIV
                     AMFVGIAGHYAGFAFMSQLVLYIANKINMSKMLAAIIIYSGSCASGFNPFTIGGRFVN
                     SIILNLGFNDSVASDFTVSIYKNMFFVHTLIFIVGYFVLKGYTVHANKIEKSAKLSKI
                     HIKTISLVAFIFALVMAPSIWLAFVPHSVFMQKASDILNPIFLCFLGVCLAIIFKIGD
                     EKEAFRNIPWDIVFMICGLGMLIALAKEAGAIDKLSIYINSVSTDEHTIAYLLGISSS
                     TMSIFSSTLGVVIPTFFPIIPNLNIDIALGLSIVVCFATFTGYSPFSTGGALVLAGTK
                     DPKESKELFIGLLVLPAILVLGGFALLIIGFFN"
     gene            17939..>18258
                     /locus_tag="RPW04_000885"
     CDS             17939..>18258
                     /locus_tag="RPW04_000885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-chelation protein CHAD"
                     /protein_id="HDX6294982.1"
                     /translation="MQIALMLEGVEFKKVNILQFYTKIAPNYEVRFRKTANEFIKTIK
                     IGKGLIRQENETVISEKEFQKQRKNSIANQISKSRYIFKLNNFPCNIDIYNDCLSDLA
                     IFEI"
BASE COUNT         6749 a         2854 c         3146 g         5509 t
ORIGIN      
        1 actaaattta gttaatactt taagtctaaa tttgataaaa tctaaagtta agttaaattt
       61 ttgggctaaa attatgaaac tattttcaaa atataccggt ttagtttatt taaaatattt
      121 tattattatt tttatggctt tggagctatt ttatataggt attgatacat taacaaattt
      181 aaaagatttt ccaaaaagtg cgaatttgca gcttatttat ctaagcctta ctgcactaac
      241 tgcggtaaat tacgtacttc cgataagttt agtttttgct cttatagttt caaaaataaa
      301 tatgataaga agcaacgaac tagttagttt ctactctctt ggaataagca aaaatactct
      361 tatacttagt ccgtttataa tatctcttat cataacctgt ttatatatat atttatctag
      421 tacttcattt gcatatgcta gagactatca aaaaagcttg ataaattttc aaggatttaa
      481 taaatcttca aatagtatat ttttaaaata cgaaaacaaa tttatctaca tagacgagtt
      541 gtatcctgct atcggagaag caaataaaat aaaaatattt gaaactcaag acggcgatat
      601 tataggtcaa attaccgcaa aaaaagctaa attcgaagac aacagctgga agctttttga
      661 tgttgatata ataagtctgc cgccacgtct tgaactaaac gctaccggat atatagaaaa
      721 tacccaaaaa gagcttctta tactaagcgg attcaaacca agaactatag aaaatatata
      781 ccaaacaaat agtaattatt ctatcacaga tgcgatcgac tctttaagaa ctttaaaaaa
      841 cgagggaatt aatttaaaca agataaaatc tacactgtat tcactcatat tttttcctct
      901 atttgctccg cttatggttc ttatcttata ctactatcta ccgataacgg gaagattttt
      961 taaccttgct ttagcaagtt ttatctatgt tatcgtcaca ctgtgcattt ggggagtgct
     1021 ttttgtgctt attagattta gtttaaacgg agttataatc ccagaaatcg gagtaatttt
     1081 gcctattatc atactcgctt catttgcagg atttaaattt taccagcatc gttagatatt
     1141 ttttgtattt agagcctttg tatcatatga atattctgtt aattttgaca catctatctc
     1201 acattagttt tcttttaatt tttcttacaa ataattaaat atagttaaat cttaaatgta
     1261 aatctatctt caaaattctt atactttatc ggaattttat taaaatttgg ataaaatatc
     1321 aggtatttta catttttgga gatttttatg gattacagct tgctagctaa aaaatacgga
     1381 acacctcttt atgcctatga ttttgattat atacaaaatc aatataataa attaaaaaaa
     1441 gaatttaacg caagaaaatc acttatatgc tacgctctaa aagcaaactc aaatttaagc
     1501 ttactaaagc atatagcaga tcttggagca ggatttgact gcgtaagcat aggagaggta
     1561 aaaaaagcga ttttagcagg tgcgcaaaat tataaaatca tatatagtgg cgtaggaaaa
     1621 agcgatgaag agatagaaga agctttaaat ttagatattt taatgctaaa tttagaaagc
     1681 gaagaagaga tgaagagagt cgaaagtatc gcaaaaaaac ttaataaaaa agccagaatt
     1741 tcagtacgag taaatcccaa tgtagatcca aaaactcatc catacatatc aactgggctt
     1801 agtaaaaata aatttggagt cgggatagaa aaagcccgta aaatgtatct ttacgcccat
     1861 aaaagtgaat ttttagatcc ggttggaata cactttcaca taggaagtca gctaacagat
     1921 ctaaaacctg ttatagaagc tgcaaatata gtaagcgacc ttttaagaga acttaaagct
     1981 cttgatatcg atatcaaatt ttttgatgta ggcggaggaa taggaataag atatgaaaac
     2041 gaaaaagatc ctgatctata cggctatgct caaggaattc tagtagcgct taaaggtgaa
     2101 gatataacca taatatgcga accgggaaga tttttagtcg gaaacgccgg agtttttata
     2161 acaaaagttt tatatgaaaa gataaatgat actcacagcg atgataaaaa aagatttatc
     2221 atagtagatg gagctatgaa tgatctattg cgccctagtt tatatgaagc tcatcatgaa
     2281 attatcgctt taaatagcgg agaaaaagag ctttgcgacg tggtgggtcc gatatgcgaa
     2341 agcggcgact ttttaggtaa aaacgtaaat ttaccaaagc agtcaagcgg agatattttg
     2401 gtagtaaaat cagccggagc atatggattt tgtatgtcta gcaactataa ttcgagatta
     2461 agaactgctg aagtcgccgt ttgtggcggt aaagatagac ttattcgtca aagagagagt
     2521 tttgaagatt tagttaaaaa cgagaaagag tttatataat gtattttata gatgtgcaag
     2581 gaacgcttat aagcgacacg gataaaagcc ctattaatgg agcttgtgag ctcatagagt
     2641 ttttaaattc aaaaaatatt ccgtatgttg tcataacaaa caatacaaaa gcaaaaagct
     2701 tggatttttt agcaaatttg cgtaaaatcg gactgcaaat caaagacggg gcttaccttg
     2761 atccgttttg cgttttagaa gagatacttc cgccttgtaa ttgcgctatg tttggtgcta
     2821 ctcagtttgt agataccatg aaaaatcttg ggtataaaga ggattttaaa gagccaaaag
     2881 cggttcttat cgctagttgg gatgatttta aatttagtga ttttgcaagt ataaacgagc
     2941 ttgttttaaa cggggcaaag ctcatcgcta tgcatgaaac tagcatatac aaaaaaaacg
     3001 gaaggcttta tcctggagtc ggcgccatat ccgctatgat aaattatgca acaggaatta
     3061 gccatgaagc tgtcggaaag cctagtaaag cattttataa tgaggcttta aggctcttaa
     3121 atttgcaaag cagtaaagtc gaatttaaag atataactat aataagcgac gatgcaaaag
     3181 gcgacttaaa aggcgctaaa gagattggta tgaaaacatc gcttgtgctt agcggaaaag
     3241 ttagcgacca aaataaaagc ggcgtaaaaa aagacatttt agatagcgtt tataaagata
     3301 taagcgaagt tttaaaggcg ataaatgcaa agtattgatg agctaagaac taaaattgat
     3361 gatatagatg atcaaatttt atctttacta aataatagaa tgagatatgt tcaaaaaata
     3421 ggcgagctaa aacagagcag taaaactgcc atatatcgcc ctgaacgcga gcgggcgatt
     3481 ctttctcgcc ttgaatccac taaagacaat aagcttagta aagaagctat agaggccatt
     3541 tatcttgaaa tttttgccgt aagcagaaat ctagaaatgc cgcaaaaagt agcgttttta
     3601 ggtcctatcg gcacttatac tcatcaagcc gccgaaagta gatttggcgc tatgagcagc
     3661 tatacggcgc tttcaagcat agaagccgta tttagagaac ttgataataa agaagcgaaa
     3721 tacggagtcg tgcctataga aaacaacaca gaaggcgctg ttggaatcac tcttgattgt
     3781 cttagaaaat atgaaaatgt aaaaattgta gccgaaattt atatggatat tcatcatagc
     3841 tttgttagca tgagcgaaaa cttaaaagat atcaaaaaaa tatattctca ccctcaaggc
     3901 tacaatcaat gtcgtagatt tttagatgat cacaatctaa atgaagttac ttttataccg
     3961 acaaaatcta ccgcagaagc tgcatttcta gcatcaaaag aaaaagactc agcagccatc
     4021 tgttcaaaga tagccgcgca tataaataac gttcctatag tatttgatac gatagaagat
     4081 aatcttgcaa acagaactag attttttgta ttaagcgact ttaaaaacgg taaaagtgaa
     4141 cataataaaa cgagtatttt ggctaaaaca gcgcacagac caggcggatt agttgaacta
     4201 ttatctatgt ttaaaaacga aggtataaat ttaaccaaac ttgaaagtcg tcctataaaa
     4261 caaaaagatt ttcaaactgt attttatata gattttgaag gccacattga tgaggaaaat
     4321 ataaaaaaag tgctagaatt agctgctaaa aacggtcatg atataacatg gcttggaagt
     4381 tatatcaatc aagaaggata aaaatgaaat ttaatagcca tatagaaaat ttacctattt
     4441 atgaagccgg aaaacctata gagctagtta ttcgtgaatt tggaatagat caaaacgata
     4501 ttataaaatt agctagcaat gaaaatccgc taggaactag caaaaaagtt atagaaaaga
     4561 taaaaaacgt agcacaaaac agtagtttat atccagatga tagctactat gagctaaaag
     4621 acggactatc aaatttatat aaagtagagc cgaaaaatgt gataatcggt agtggaagcg
     4681 atcagataat tgagtttgct cttcatgcta aggcaaatgg aaaaaagggt attttagtaa
     4741 gcggagtaac gtttgcgatg tatgaaattt atgctaaaca tgttggagca aaaatttaca
     4801 aaacaaagag caaagagcat aatttagccg agtttagaga aatttaccgt acaaataaaa
     4861 atgatatttc ggttatattt ttgtgtcttc caaacaatcc tcttggagag tgtttggacg
     4921 ccgatgaagt tttttctttt ataaaagacg tgagcgaaga tactttggta gttatagacg
     4981 gcgcttatat ggaatttgct aagttcaaaa gtagcaaaaa agagatagac ccaaaaacgc
     5041 taatccagac tttctcaaat gctctttatc taggaacatt ttcaaaagct tacggacttg
     5101 gcggaatgag agttggatat ggcatagcaa atgaagaaat tataaaagct cttcatagat
     5161 tgcgagcacc gtttaatata acgacgctta gtcttgcggc agcgattgag gctttaaaag
     5221 ataatgattt tctaaaagag acattggaaa ataattttaa agagatgaaa gtttatgagg
     5281 aatttgcaaa agaaaacagt atagaattta tagaaagcta cacaaatttc attactttta
     5341 tatttgatca acatcaaaat gctactaaaa tttgtgacaa cttattaaaa caaggtataa
     5401 tattaagaaa tttaaaaagt tactcaatga atgcgatcag gataacaata ggaaaaaatg
     5461 aacaaaacag acgtgtttta gatatgctaa aaaaggaaat ttaataaaat atggattaca
     5521 agactctatt tcatcaagtc ggtcagctat atcaaaatct tacgctaaaa cagaagattg
     5581 tagcagctag cagtgttgtt atagtggttg gatttttagt atttttaagc ctatataaaa
     5641 gcagcagctc tggatctgag tatgacggat acagcatact atttagaaat ttaaatcccg
     5701 ccgactcagc tcaaataata gctcaactag aaaaagatgg agtaacttat aaattagcaa
     5761 atgaaggcac tatattagtt cctactaaaa gcgtttataa agagagaata gcagtagcaa
     5821 gccttgggat aatgaaagac ggtaaaaacg gttttgagat atttgataaa caagatttcg
     5881 gcgctactga taatgagcaa agagttaagt ttcaaagagc cattcaagga gaactttcaa
     5941 agacgataga aggtcttgaa cccatagaaa aagctactgt ttatatcgca tttcctaaag
     6001 atagcgtatt tacggaaaga caagtaccgc cgactgcttc agtagtagta aagataaaag
     6061 acggtgaaaa actaaataga aaacagatag acggtataaa aaggatagta gctggatcag
     6121 ttacaaattt aaaagccgaa gatgtgaaaa tagtcactca agacggagta gcagtagggg
     6181 atgacgaaat agctttagaa agtgaattag tagcttcaca aataaaatat aaaaaagaat
     6241 ttgaaaatac atatgagcaa aaaattattg atatgatagg aaaattcaca ggcggaagag
     6301 ataaagtaac tgcaaaagtc agcatagagt ttgacttttc cgtaaaagat agtcaaagtg
     6361 aaatttatga tccaaactcc gtaataagaa gcgaacaaaa tatagaagaa aaaagagagg
     6421 gaaaacagcc aaaagaagtt ggtggagttc caggagcagt tagcaatata gggccagtag
     6481 aaggcttaga tcaaaataaa ccagatgagt tatacacaaa aaacgtagct aatacaaact
     6541 atgaaatatc taaaaaaatt atcaaagtca aagatcaata tgcaacaata aaaagagtga
     6601 ccgcagctgt tgtcgtagat ggaaagtatg aaagagagaa gaaagaagac ggtagtttaa
     6661 gcgatacaat agcttatgtg cctctaagcg aagatgagat aaataagata aaatctctag
     6721 ttgaacaaac tatcggttac aactcgacaa gaggagatga agtcacagtt agcaattttg
     6781 aatttaaaaa agccggaaat ttaaatgcaa atacgacaaa aataggaata ttttatgact
     6841 catacctaaa acctctaact ccgataatta aatatcttat agtgctgctt atactatttg
     6901 tattttataa aaaagtcatt actccattct tgcaaaaaat ggtcgaaaat gctaaagatg
     6961 aagactttga gccgcaaaaa gaagagagta atatagaaga agaagccgaa gatactttgg
     7021 aaaaattcaa agccgcaaga aaaagagttg aagatgagct tggtatcgga gaggatttca
     7081 acgaagatga attaaaatat gaggtattgt tagaaaaaat gaaacttata gtatctgaaa
     7141 gaagcaaaga aatatcaact cttcttcaag gaatgataaa aaatgactca gacttcaact
     7201 cgcgtaagga gttttgatga caaagctaaa tgaacagcaa aaaatgatat atgatgatct
     7261 tagcatgcca gaaaaagtag ccatacttct tatacaatta ggagaagatg ccaccactct
     7321 tgtattttca catatggata tagatgttat aactgaaatt tcaagataca tagcaagtgc
     7381 aaaaactata gataaaacag ttgcggcggc ggtattggaa gaattttacg cacttatgca
     7441 gtcaaatcaa tatatgaaaa gcggcggtat tgagtatgct aaagagatat tatttagaac
     7501 atttggacca gaaattgctc aaaaaatcat ggataaacta caaaaatcca tggaaactac
     7561 aaaatctttt ggttatctta gccaagtaag acctcagcaa ctagcagatt ttatagtaaa
     7621 agaacatcct caaacaatag cattgatagt agctcatatg gatgcaacta gcgctgctga
     7681 aactcttgtg tattttccag atgatttaag aagcgaagtt atcatacgta tggcaaattt
     7741 aggcgacata agcccatctg tcgtaaaacg cgtatcaacc gtattagaaa gcaaacttga
     7801 aagtcttact agctacaaag ttgaagtcgg aggtccaaga gcagtcgccg aagtgctcaa
     7861 ccgtcttggt caaaaagcta gcaaatccac tatcggtatc attgaacaaa gcgatcctag
     7921 cttagccgta accataaaag aaatgatgtt tacttttgaa gatattaata ctcttgataa
     7981 taatgctata agagagatat taaaagtagt agataaaaaa gatcttatgg ttggattaaa
     8041 aggtagcggc gaagagctaa aacagaaatt cttagcaaat atgagtcaac gcgcaagtga
     8101 agcattcgta gaagagatgc aattcttagg agccgtacgc gtaaaagagg tagaagaagc
     8161 acaaaggcgc gtcgtagaat tagtccagaa actagccgaa gaaggagtat tccaagtagg
     8221 cgaaagtgat gagatgatag aatgaaacaa agtaacgtca tagataacaa aaatgcagaa
     8281 catactatag agccttatag atttaaggtt ttaggcgcat ttcctacaaa cgatgtaaaa
     8341 gagcaagaaa cggtttcaaa tttagaagag caaaccgaaa ctcaggctcc aaaacaagaa
     8401 gtcgagaaag agagccaaac tcatcaagaa gagcctaaat tagagccgag tttcattgaa
     8461 gagctattaa aacgaaccga tgaattaagc ggcaatataa taaaactgca aatgcagata
     8521 gaaaatcaag aaaatgaatt taaagtaaga ttagaacaag aagttgcaag aactaaagac
     8581 gaagctttaa aagaaggcca tatggcggca aaaaccgaat ttgaagccga gttaaacgag
     8641 atagaaaaaa agtatatgca ttccatagaa aaacttgatg aagaaaaatc aaaactagaa
     8701 gcactatacg catcaagtca gcaagaacta gcaagtactg ctatagaaat agcaaaagaa
     8761 gtagtcataa aagagataaa agatagttca tctgtagttg cttcaaatat tgctaaaagc
     8821 ttgatcagcg aactaaatga cgcaactagc atagagataa aaacaaatcc aaaagattat
     8881 gagtttttaa aagcaaattt aaatttaaac tcacatataa aaattacgag tgatgatgct
     8941 ataaatgccg gcggagttat agttttaagc gaagttggaa atatagacgg aagcgtgatg
     9001 gcgagatttg caaaaatcaa gaaaatttta agcgagtaag atatggatat aaaatcaaaa
     9061 agtttagaag aattaactga tttatgcgat actcttagag ataaaatact aaaaaccgta
     9121 agttcaaacg gcggacatct cagctcaaat atgggggcag tagagctgag cgtagccatg
     9181 cattatgtat ttgacgtatc aaaagatcct tttatttttg acgtaagcca tcaaagttat
     9241 gcacacaaac tattaaccga tagatggaat cgatttgatt cgcttaggca atttaatgga
     9301 ataagcgggt acacaaaacc tagcgagagt aaatttgatt attttgtagc tggacacagc
     9361 tcaacttcta taagtcttgt agtaggagct tgcaaagcta taaaattaaa aggcgaaaac
     9421 agacttccag ttgccgtaat aggcgatggg gctatgagtg ctggaatggc ttatgaagca
     9481 ttaaacgagc taggagacag aaaatatcca tgcgtgataa tactaaatga caatgagatg
     9541 agcatatcaa aacccatagg ggctcttagt aaatatctgt ctcagatgat ggcaggacag
     9601 ttttatcaga aatttaaagc cagagtaaat caatttctaa gctacgttcc agattcagcc
     9661 gcgtatatgg caaaacgttt tgaagaggga tttaggctca taactcccgg aatgtttttt
     9721 gaagagttag gacttgagta tataggaccg gttgacgggc atgacctaaa agaattaatc
     9781 tctactttta cgaccgctaa attgatgaat aaaccagtta ttgttcatat ccaaaccata
     9841 aaaggtaaag gatatgagct agcagaaggt ccaaaagaga agtggcacgg agtaagccct
     9901 tttaatctaa aaaacggtca aagcgtaaat caagcaaatc aaaaaagtgc tactaatatc
     9961 tttagtgaat tacttttaaa tttagccaaa aagtatgaaa atgtagtagg cgtaacggcg
    10021 gctatgccta gtggaaccgg tttaaataag ataatagaag tttttcccga tagattttgg
    10081 gatgttgcga tcgccgaaca acacgccgta acatctatgg cggctatggc aaaagaagga
    10141 tttaagcctt atatagctat ttattctact tttatgcaaa gagcttatga tcaagtcatt
    10201 cacgactgcg ctattatgag gcttccggta gtattttgta tggatagagc aggaatcgtt
    10261 ggtgaagacg gtgaaacgca tcaaggtgca tttgatataa gttttttaaa tgcaattcca
    10321 aatttaaatt tagttgctcc acgcgatgaa gagagtttta aaaatataat ggaattttca
    10381 tacgcttttg attctcctct tgctattcgt tatccgcgcg gaaactttat cttaaataat
    10441 gagtataaat cgcaaaaaac agctcttgca aaaggtgaaa ttttagaaaa tggagacggc
    10501 agtgtagctt ttatcggata tggaaacgga gttggaaaag cagtacaaac tgctaaaaag
    10561 ttaaatttca aacctacgat agtagattta gtctttgcaa aaccacttga taaagagctt
    10621 ttacttcaga tcgcaaaaac tcataataag tggtatgtat tcagcgatag tgccaaaaga
    10681 ggaggcatag gagaaatatt ggctggattt ttacaagaaa atttattaac aaatatttta
    10741 ataaaaagtt ttgaatacga agatacattc ataaaacatg gaaaaactag tgttgtcgag
    10801 gattatttat ctattagcgc tgaaaaaatc tctaatacgt tttaaaagat aaaaaatatt
    10861 aattgatata aagatatttt aatctttttt tagatacaat agcaaaaata attcagagga
    10921 aattagtatg gattacatgg agctattaaa acaggctaat ctaaaagcca caccacaaag
    10981 actctgtgtg ctaaaaatat tagacaagca cacccacccc acaatagaag aactctatgc
    11041 tgagattaag agggattatc catctatatc attagctaca gtctataaaa atttaaatac
    11101 attaatagac gaaaagctag ttgtagaggt taatactcca aatcaaaaag ccaaatatga
    11161 tatttatgaa catcctcata ttcatgtagt atgttctgtt tgcggtcatg tagaagatgt
    11221 aaattgcgat gatgctaaaa tggttgagta tcaagaacat ctagaaaaaa agataggaaa
    11281 tttgatagat agactaaata tagtagcaac aacaaacggc tgcaaaaagt gctctaattg
    11341 ttaagtctgg attaatccgg acttatttta gcacattttt tttgaaaaat attagagtta
    11401 tgcacagaga tacgatgcct atgataaaca taggtaaaat atatttcaat gaatctataa
    11461 aactaatatc ttttaaaaaa actgcctttg taaataccac atagtaagta agcggtagta
    11521 aattgctaat tggcgcaagc cagtcaggca tattttctac cggcgttaca aatccagaaa
    11581 gcataaatga cggaagtaaa aacacaaatg atccaagtat cgcttgttgc tgcgttttac
    11641 aaagcgcaga tataaataat cctataccgc atacagaaaa tataaaaata gtcgaaccaa
    11701 gatacaaaag ccacaaagaa cctataatag gaactttaaa gaaaaatcgt attataaata
    11761 taacaatagt tgataataat aaactaagta taagtgccgg tagcaacttt cctattaaaa
    11821 tttcaaaagg ctttagcgga gaaacgataa tttgatcaaa agtccctatt tcgcgctctc
    11881 ttgatatact aagagatgta agcactatcg ccattaccat aactattgat ccgtataaat
    11941 ttggaactat ccaccaaaaa ttttctaaat tcggattata gaagtttcta actgaaattt
    12001 gtatatcgct taaattcgat atcatagtct gttcgatgta tccatttact atttgagctg
    12061 agtttgaatg tctgccatct aaaactagac ctaaactttc tcctcttata acaaaatctt
    12121 tagggatcat taaaaacgca aaaacctctt ggcccgtaag caactctttt gcttcattaa
    12181 gacttttgac cattacgata ttttttacaa atttagcact ttcaagcttt tgaattatct
    12241 ctctgctctg ttttgaacta tctaaattta aaacagctaa atttaaattt cttacttcca
    12301 aagtaacaga aaatgcaaaa atcaaaatct gcataagagg cggcaccatc acaacaatca
    12361 tgcttttttt atcatttttt atcgccaaaa tttctttttt gataagagcc aatagtctca
    12421 atccaaactc ctttttgact ttttaagtac caaaatacct actacaaatc ctataatgag
    12481 catgtaaaca gcatctaaaa taaaaacatt gtataaattt ccaactaaaa atatatttcc
    12541 taacgaattt acaaaataag tcgcagggac aaaatatgaa agatactgga taaatgtagg
    12601 catattgctt atctcaaaca caaatcccga aagtaaaaat gcgggcaaaa agcctacaat
    12661 aatcgaaatt tgagctgcta caaactgatt tttagctata gttgagataa aaagtccgat
    12721 taaaagggcc ggaaaaagat agataaaact taacaaaaac agtataaaaa tactccctct
    12781 aaatggaatt tcataccaga agtacgccac aaaaaaacag attacggctg agagcatagc
    12841 aaatacgaaa taaggaatca gcttacctat aattatctct aaatttgaaa ccggcgtact
    12901 catcaaagac tccatagttc ctctctccca ctctttagcg ataacaagag atgtgagcaa
    12961 agtacctatt aaagtcatta taactgcgat tgaaccgggt atcaaaaaat atctactgga
    13021 taatttttca ttaaaccagt atctagactc taacaaaacg cgttttgaag ttaaattttc
    13081 tgcccaaata taaattatac tagatccgta ttgacgtatc aaatttgcag tatttggctc
    13141 gcttccatcc gtgataattt gaaatttaag gctattttta tcatcatcaa tgactagaaa
    13201 tccgcttatt ttatttaatt tcatatcatt tataagctca tttttatcgg tagttatttt
    13261 tgtgataaaa aattttgatg cagcaaactt cgatattatc tcttttgaat cctttgaact
    13321 actgtaattt actataccaa aagatatatt tttagcatcc aaagataccg cgtatcccat
    13381 caaaaacaat aaaataatag gcaaaataat agctatcaaa gcagtacttg gatctctcat
    13441 agcctgcaag ctctctttaa tgacgatagc aaaaatcctt ttaaagctca tttgtaccct
    13501 ttataagctt tataaacgca tcttttacag atatcgcgcc gactctttgc tttagctcat
    13561 cgggagctcc caccgctatc atctttcctt gatcgataat cattactcta tcacaaagct
    13621 cggcttcatc cataaggtga gtcgtaacca taacacttat tcctaaattt gaaatagcat
    13681 ctatatgcct ccaaaactcc ttcctagtga taggatctac tccgcttgtc gcttcatcta
    13741 aaaataatac aagaggagaa tgcataaggg cacacgataa agcaaggcgc tgttttatac
    13801 caagaggcag ctcaaaaact ttatttttca aatatctatc aaagccgaaa atttctatca
    13861 tagaggctat tttatctctt ttttcttttc ccctaagccc ataaagtccg gcaaaaaagt
    13921 caagattgtc ttttaagcct agatttccgt ataatgagaa tttttgagcc atatagccta
    13981 tcttattttt cataacatct atgctatttc catagataag agactctcct tcacttctag
    14041 ataaaagtcc acaaatcatc ttaaacgtgg tcgatttacc ggctccatta ggacctaaaa
    14101 agccgaatat ttcacccttg ctaatctcaa aactaatgtt atcagtagcg gtaaatgagc
    14161 caaatttttt tgtgagacct atagctttta gagcaaaaca atcttgctta tcgactctgt
    14221 ttagtatagc agttagtttt gaatgcgctt tggtttttat ctttagcata tcaacaaatg
    14281 catcttcaaa actaggagct acattttcaa atttaaaatc cgcaaaatct tgaaacaaag
    14341 agcaatcttt cgttttcaaa acaactctta tttttgagcc aacaaaatat gcatctaaaa
    14401 cattatcgtg ctctaaaata ttagttaaaa atgatttttt atcgcctctt acttcgacta
    14461 aaaatactct attttctaat atattattta tacgtttagg atcgtcgtca aatataattt
    14521 taccgtcatt tatgagtaaa actttatcac acaaaccagc ttcatcaagg taagaagtcg
    14581 cccacaatat acttacgccc gttaaacttt ttgccataga ccaaatctct tctctagaaa
    14641 taggatctac gccgactcct ggctcatcta gtaaaaggag ctccggtttt ttaagcaaag
    14701 ttgcgccaaa agccaacttt tgcttcattc ctccggacaa acttccagct aatctatctt
    14761 taaatatttt taaatttgtg aattccaaaa tttcatctat gcgttgcttt gaatgctgta
    14821 catcttgaag ctttgcgtat aaatttaaat tttcttcaca agtaagatct tcatataagc
    14881 caaatatttg aggcatgtag ccgattttat ttaaaaaatc tttctggcta caaggcattt
    14941 tatagcctaa aacatttaat tcgccgctac ttggtgtgag aagtccggcg caaagcctaa
    15001 gaagggttgt ttttcctgaa ccatctggtc ctactacgcc tgtgattttg cctttgatgg
    15061 catcgaaatt aatacttttt aaagcctcgg taaaaggctt atcaaaattt cttgtaagat
    15121 tagttgcttt gatcattgaa tttgatatgc actggcatac cttgctttag tcgatcatct
    15181 ttatctatca acgtaacttc aaatttataa acaagatctg atcttagctc cgtagtttga
    15241 atgttcttag gagtaaattc agccacagat gagataaaat ttatatagcc aagatacggc
    15301 tcgcttcttg catcgctaaa aattttcatc ttttgttcga gttttatctt accaagattt
    15361 ttctcatcta tataagctct tatgaagtat ttatcatctc tagcgatctc gactactggc
    15421 tcatttgcgt ttgttatagc acctatttct ttatatcttt tttgcaaaat tccatcatac
    15481 ggagagatta aaaccgaatt ttttatatca agctctatag cttcaagatt aatatttaaa
    15541 tatcttacaa gctctctttg agcttcgata tcctcttttt gatatccgtt tttaagaagt
    15601 tcgtaattag cttgagcaag atttaaattt gctttagcgg cttcaaagcg tgtttgagca
    15661 gtcataaacg cctcttcgga agttgctttt gatagcataa gtttttgttg tctattaaat
    15721 gagttttgtg tctcttttaa atttgcagca gcagcctcaa gtctggcttt actctgcttt
    15781 atctcctcta tcctataacc agattctagt tttaaaagat ttatattttc tatgtttatc
    15841 tttgatttta agctatttag agagttttga agatatgagt catcaagata taccaagggt
    15901 tcaccttttg aaaccttagc accttcgatt ttcgagatat ctactatttc gcctaaaaat
    15961 ctaaaagaga gatcgactgt ttttgtatca acatttccgt aaaaaatatc gtccttatct
    16021 tttagtataa actctttttc atagaattta taaaataaaa atatcaaaac cagaacaaca
    16081 ccgataactc caagcttttt caaataaact ccattttaaa ataacaatta ataatagata
    16141 aatattatac aatccagaag tttaaatgta tctgaataga actattcaaa ttttaagctt
    16201 atttagatat atttatgcaa ctatttttat cgtatggtag agttttttca taataaatac
    16261 attatatatt aaatttaaac taaattttaa acaaaatata atattgattt gataatattt
    16321 aaataataga aatttataat cactacgcaa aaaaaattag ttaaatttaa ataacaatgt
    16381 ttaaaatatt tttaaattta acctaatgtt agcgtaattt aaaaatttaa aagagggaaa
    16441 atgcaaacca tacaaattct catacccgtg tttttgatcg gttctattat tttaggatac
    16501 ttatacaaaa caaatatagg tatatttgcc attccgcttg catttatagc agcatttatc
    16561 catggattag aagtaaaaaa tataataaat ttatggggat taaatctatt tttcatactt
    16621 atatcaatga cgttctttta cggttttgct ataagtaacg gtacgctaaa tcttttggcg
    16681 tcaaaagcca tttacgtctc aagaaatcaa ccttgggcta ttccgattgt tttgtttata
    16741 atcgttgcaa tgtttgtcgg catagcagga cattacgccg gatttgcatt tatgtcgcag
    16801 ttagtacttt acatagcaaa taaaataaat atgagtaaaa tgttagcggc tatcattata
    16861 tactccggat cgtgcgccag cggatttaat ccgttcacga tcgggggtcg attcgtaaat
    16921 agcataatac taaatttagg atttaacgac tcggtagcta gcgattttac agtatcgata
    16981 tataaaaata tgttttttgt gcatactttg atctttatag ttggatattt tgtgctaaaa
    17041 ggctacacag tacatgcaaa caaaatagaa aaatcggcaa aattaagcaa aatacatatc
    17101 aaaaccatat ctttagttgc ttttatattt gctttagtta tggcaccgtc tatctggttg
    17161 gcatttgttc cacatagcgt atttatgcaa aaagccagcg atattttaaa tccgattttt
    17221 ctttgctttc ttggagtatg tcttgctatt atattcaaaa tcggagatga aaaagaagca
    17281 tttagaaata taccttggga tattgttttt atgatatgcg ggctcggtat gctcatagct
    17341 cttgccaaag aagcaggagc tatcgataaa cttagcatct atataaatag cgtatcgaca
    17401 gatgaacata ctatagctta tctgcttggg atatcttcaa gcacaatgag tatattttct
    17461 agtacgctag gcgtcgtgat acccactttt tttcctatta ttccgaattt aaatatagat
    17521 atcgccttag gacttagtat agtcgtctgc tttgctacat ttactgggta ttctcctttt
    17581 agcacgggag gcgcacttgt tctagccggg acaaaagatc caaaagagag caaagagcta
    17641 tttataggat tgttagtgtt acctgcgata ttggttttag gtggatttgc tttgcttatc
    17701 atcggatttt ttaactaaat ttaaaatata ttggttctaa cctgctcaaa atatatttaa
    17761 tattttttgc aatataagtc aaatatcgcc ttatatttta attttaagaa aaaaaatagg
    17821 tgaatatgta taaagctagt ttttagtaga tttcaggtaa aatattccca ttttgtaggc
    17881 aaaggatctt gatttggttt tagaaattga gcgcaaattt ctattaaata acggcttcat
    17941 gcaaatagca ttaatgctcg aaggagtcga atttaaaaaa gtaaatattc tacaatttta
    18001 tacaaaaatc gctcctaatt acgaagttag atttcgcaaa actgcaaacg aatttataaa
    18061 aacaataaaa ataggcaaag gcctcataag acaagaaaat gaaaccgtaa tttctgaaaa
    18121 agagtttcaa aaacagcgca aaaacagcat cgcaaatcaa atttctaaat caagatatat
    18181 atttaaacta aataattttc catgcaatat agacatttat aatgattgct tatccgatct
    18241 ggcgattttt gagataga
//
LOCUS       DAPPKW010000028        17759 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.028, whole genome shotgun sequence.
ACCESSION   DAPPKW010000028 DAPPKW010000000
VERSION     DAPPKW010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17759
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.028"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            95..1075
                     /locus_tag="RPW04_000886"
     CDS             95..1075
                     /locus_tag="RPW04_000886"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294983.1"
                     /translation="MKYKLFIFASLFILFFTFTNYVIVYLYIFDLRSNGVFSFKNFLL
                     ETTTNYNRIIIDSGSNSVHAIDSTMFEKAFGKLTINISDNAGYPLQDKLARLQKFTHK
                     GDIVLLPLEYYYYMDENPPPKIYFDNIFGSLHFYFDSLNLAHKIQFILNSPPSSLLKA
                     IFTKSQKFDDSIRFTNEFLNGKRGDYEFVQKSKPVKELEYMSCEEYIFGSEMSISPDR
                     LSNKFKKNIKFIKQIENRNGVKFVFTYPAVAGNECYNGKLKDNFLIFNRALRKFIDEN
                     GLAFVGSPYAFPYIQMDNSYYHILPKAKQIHTQNLINYIKNSPYKDIFLR"
     gene            complement(1311..1952)
                     /locus_tag="RPW04_000887"
     CDS             complement(1311..1952)
                     /locus_tag="RPW04_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018713702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDX6294984.1"
                     /translation="MDMIDITERLKDILATDGKSVKDVDVANALGINPNAYAQMKFRN
                     SVPYEQIIYFLAKRKISINLFFFGQESGNLKKSEKRYKTLKLFDVKASLGGGAWNDDE
                     DYEDVVMDNKIMDKLVSNVKGIYEIHMINCIGDSMEPHIMEGDLCMIGVGVPFKDGEV
                     YAVNTPDGVAIKECYMQEDELVLVSYNPIYTPVRFWQCECKIIGRFVGIFRGV"
     gene            2104..2568
                     /locus_tag="RPW04_000888"
     CDS             2104..2568
                     /locus_tag="RPW04_000888"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294985.1"
                     /translation="MIVTVNKYGDSIYKSISEYKDFDFKANTCVAVIKIEKVNPNKRG
                     SITTIEERIIKLSQRALKWELSRCEDDMNSGELDKFWDNHINKNKSLLVLKLIFVKSL
                     DKRVILEYLRDNGIVARDSGPRPFHILSDEEYNKIIERADTNISYHDRTRDE"
     gene            2561..2953
                     /locus_tag="RPW04_000889"
     CDS             2561..2953
                     /locus_tag="RPW04_000889"
                     /inference="COORDINATES: protein motif:HMM:NF016178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HDX6294986.1"
                     /translation="MSKIILSIRPEYTKRILDGDKKYEYRRVLAKKDVKTILIYCTHP
                     LMKVVGEVEVEGVISTSPCDMWNRTRDKAGISDKDFFKYFDGVKNANAYILGKVKQYK
                     KPKQLVSIGIKIAPPPIFPIYKIDFIIF"
     gene            complement(2991..3803)
                     /locus_tag="RPW04_000890"
     CDS             complement(2991..3803)
                     /locus_tag="RPW04_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002922158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDX6294987.1"
                     /translation="MQRTTLKAPLSSYAELRPRTTRLRAPFGWVGGKALLAKEIIPLM
                     PEHSRYVEVFGGALSVFYQKEPSKIEVVNDINSDLINLHRIIRNRPVSLQAEMNSLFR
                     SREIFDDIKNGRLRPKNDIQKAAFYFYLLTTSFGAKGDNFAMGKSRSGKSIYRDFYLH
                     SKRLKRALIENLSYEKLIKEYDSSETLFYVDPPYVGTENYYKMVNGFAMREHENLAKI
                     LKQISGKFMLSYNDCEVVRDLYKDFNLKELKVNYSLNAKSRGDRSELLIMNF"
     gene            complement(3897..4418)
                     /locus_tag="RPW04_000891"
     CDS             complement(3897..4418)
                     /locus_tag="RPW04_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009651169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan domain protein"
                     /protein_id="HDX6294988.1"
                     /translation="MRLEFGSSSDVLHKNKTEQGLTFMGIYQGAHPSWSGWNIVKNVL
                     SANIDIKNASEVLYANTTLKEMVFDFYEREFWNKMRLNAVESQIIADELFCFGVNAGI
                     KTAVKLAQKIVGAGLDGVVGIQTLRALNSIDEDKFSLQYDKLEIEYYESLAYKKPSNV
                     VYLKGWKKRANAV"
     gene            complement(4551..4784)
                     /locus_tag="RPW04_000892"
     CDS             complement(4551..4784)
                     /locus_tag="RPW04_000892"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294989.1"
                     /translation="MNWLEKMMDSAGVYKYVIFIGLIGGILGMVQKEELKKCKSSLKC
                     KIFGLLFGCFSAMFAGYIGFEVAYFFSKNLAFL"
     gene            complement(4894..5166)
                     /locus_tag="RPW04_000893"
     CDS             complement(4894..5166)
                     /locus_tag="RPW04_000893"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294990.1"
                     /translation="MAVLNNGLQTMELGATAWRIIINDNFTKLYTKNEIDTKLSGGNT
                     EISAKKLKVANVELSGGLQASGELGQIAGFLEVKINGEVKKIPYYS"
     gene            complement(5176..7398)
                     /locus_tag="RPW04_000894"
     CDS             complement(5176..7398)
                     /locus_tag="RPW04_000894"
                     /inference="COORDINATES: protein motif:HMM:NF024939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDX6294991.1"
                     /translation="MWFAAFLVVAFAAAFFLMPTAKMQDAKAAGFDDFTYPTNSNSRL
                     IPEIFGTVECHGNIIYAGQLSSYAIEKKAGKGKSQTVGYAYYMGLAYALCTSWDELKA
                     FKMNGDVMSSPNLKANGTFSARTGKNQESSNPKSTIYAYNGKQTTPDAALCRWCGKSM
                     AYSGTAYFVFHGFIGENTTATPSYSVVLKRTNLLGWGSVEDINGDANPASMLYYLLSV
                     LVGYESSSIDLASFQAVARQLKDEGLGMSLTMSNPNEANEWIEEILRTIDGVIIVKNG
                     LLYLRLLRGGYDISSLIKVDSSNACKIKLTKKSWDELYTKITVKYTDRSTFKSASLSA
                     TNTAARLALGYDRAYDVEYMGITSGTNASNVMNRLFKKISYPVSTISFKISEVVFEQM
                     LIGDVFFFSSSELGVNDIVFRITSLGSDRQDDGGITVEAIEDIFGLSNATLSLEQEDL
                     SERLNLDIGEIEYFECRDAAAEQSVGRAVIPLIAKPSGFVQNISVSEGDIDDIANASS
                     FLLATLVNSYNTTSDIDEDGFLVRAISPLYPMVATELRWQRVKFSGFIGDEQFAYGII
                     ETTNEPNIFRIKRIMRGMNNTKKSYHSSGTRVWLCEDIGSEVGILPIVTTEPTIKAVA
                     QNYINVTETKSLSYKYKFSVEKPYTPSNIQGFRDGGVVNLSWTPCVRLAGANFRNCDT
                     IVAGEDEGKSEGAWEIRYSGGVVKTDKLNAQITTTATTFYIKSVLGGYFSDEINISIR
                     "
     gene            complement(7400..8104)
                     /locus_tag="RPW04_000895"
     CDS             complement(7400..8104)
                     /locus_tag="RPW04_000895"
                     /inference="COORDINATES: protein motif:HMM:NF020913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage BR0599 family protein"
                     /protein_id="HDX6294992.1"
                     /translation="MSEVYTFSLGAKEIIYDSDTSPITRDEINKEFDNEEANISMPLD
                     LFPATEFRVFNPATTVWCKIVKNGVMIFYGRVAGCSFDIDAGIAKLKLITLKGMLKSK
                     IPSRTYSRSCPFEIFSKDCKLKREDFALYLFEHDIKLDESRFKLTSPKIEAFKSGYFA
                     LGYIEFGEAKSHIVAHNDDTLELLFPIPNAFNGIIKVYPGCDKRIDTCETKFNNLVNY
                     GGFAFVPAKNPVTEGF"
     gene            complement(8097..8639)
                     /locus_tag="RPW04_000896"
     CDS             complement(8097..8639)
                     /locus_tag="RPW04_000896"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294993.1"
                     /translation="MEIFSFIPLRDIGVSINNSYSLIGKEYRNVSKYAPSDTRLSFSL
                     SFSFDKAKLRAFESFFISKQARVGSFFIRSLRVDFDNVNIVSSALQTLSSNKTFGVYA
                     RRAFIYNRRTKGIYEIQNVIIGNGVDQIYLKSGIDEFEKDDELENCYKVRFDSDTLRA
                     TKISPNRYKVDMSFKEVIDE"
     gene            complement(8639..10213)
                     /locus_tag="RPW04_000897"
     CDS             complement(8639..10213)
                     /locus_tag="RPW04_000897"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294994.1"
                     /translation="MNSGDITTSLTPQTFFFIETEENAVVKEYMIFADDRSIITSFSF
                     LGYSIVIGGVLSYMIRLNHNFTSGALLWAVRRTNDVFRPDPIQKYSYAPVGDFYNPAL
                     TQINNGRNFIRPLYPIGFFCPYRNAFKNDNFIPFMRIYVFYKHTDGTSRVAGYLKDMF
                     YVPKNGLKQGEILMRGSIKYMVVDLGITDFYLVVKIEIRLIDGVGVSTSFLDDSQYFG
                     VNLGTAKLKTSHPSYTYISKTHTTNMHYLIYYPDGIYISPYITHHDFGNITEPKSISY
                     TLFNNSRNTQVLRNTDMQGFAGLNIKDISIGNKIYPYEQTTFSVVALTFGDIELKANL
                     GLAFSDFGCYFSFAGKRNVIFAFVPNDEYYEEKSLKTDIFTALKGNEKRVALAKKCKI
                     NTGFKLIFKSSLNLNSCMELLSYGAKQNLLVPLWNSAFFASVDISGATSLEVPEFCEF
                     EVGKFITVISQYADPIFRKVLEINGKSISIDDMVDIHKGDIIAPLFKATIAKQTSLSR
                     SSKDTLELKLEMKECD"
     gene            complement(10239..10502)
                     /locus_tag="RPW04_000898"
     CDS             complement(10239..10502)
                     /locus_tag="RPW04_000898"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294995.1"
                     /translation="MKYIQGQNANIYDVYADIITFLQSLGWTLLRQDNEAHNISYKFG
                     DGKTTFMQSLQGDVIYLRVSGRIKDSYWSGQKFIRYRYRSLRR"
     gene            complement(10504..11760)
                     /locus_tag="RPW04_000899"
     CDS             complement(10504..11760)
                     /locus_tag="RPW04_000899"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294996.1"
                     /translation="MYFEGSVSSAPEFLDVLKAKALEAGYESVSDRTLDVTNVNDYFD
                     IGGFETQIDNVKSGASRYLNTAKDINSSYYDYQSNIIFTKDVLFKKIVIKNYLSTING
                     EIIGINEDNSTEKITDIVSATNPVTIESPTNKKYRGIHIKANGQYRVDITLENGSYIY
                     RELILRKSVGNKELLYMFILEDYGDKYFLHMSPLKSFNENKKAIIDSYAQIGAMPNMA
                     IAMLNKGVNNYYISLQDRRICGAFSMQNGNNITWQPFYIGLLRPYGEEISPDPFLCFA
                     SGTSRVAVLASKEHISLPYAKYNNEYQQCITHPCWAYPPTKDNLYGDLDEPFCTPLIV
                     CYFGKYNGSSSLGSTIQERARALSLYSYKDVESKLLGDMDGIIAIILGSGVSVGDDVS
                     CDGHNYKIVTAGNELISPYCYAIIKE"
     gene            complement(11763..14228)
                     /locus_tag="RPW04_000900"
     CDS             complement(11763..14228)
                     /locus_tag="RPW04_000900"
                     /inference="COORDINATES: protein motif:HMM:TIGR02675.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HDX6294997.1"
                     /translation="MANEKVEIQIQINSNAQGVTSSMKGLSSSINDTTKSVSSLGAKT
                     KDMAQSLTYGYNAVLGLRGAFETLSGPLISYLKTADEFNTMSNRISLVTKSTSELNAV
                     NSELFRIANATSTSFNATAEVFSSLATATGELGKSNAQTLSVIETINKTLTISGASAA
                     LFQLSQGFASGVLRGEELNSVMEQTPRLARAIAEGMGISMGELRAYGAAGKLSAEVVF
                     GALQNSAAKIDSEFNKMGLSISNALTNAKNSYTELMVAFDSVSGGTSEVANAIAYWSD
                     KVRDNKAQIIEFANDFVRSLQLMGSEVIFIGANIYKTLLSIPTALALGVENLSAKVAD
                     TFGVDALKIDGLSDTLLKEWQSVDSMIENVTVTQKNLFNDLKEFKTELKGVSKDGFED
                     MAKAKPAAKQKTKVDNKELIQEYKDLELYYKSIGDHATAWSYKEKQLSTELQNSKLSV
                     EQKTAVLQAQKRVYLELDKAEANRLKAEDEIKKDLSKLKNDELNYETRLINQKAKEYE
                     KYGVDRVSIEQWVASKTAQVQENAAKKEQAANIKKLEYLKDYYELIGEKNKAANIRTD
                     IEAIRLKNAGASDTDIADSLYGNTQKRANYDALNSGQDMGIANEFVDRLKAIDDFQNA
                     ENSRIEAHYARLEASKENHENKMKELEKAKFDSQVATAGATFDMLGSLAQSFYAASGN
                     QSKTAMRAYQAIMVGKAIVNTYTAATNAMATAGNPYLGAAMAAVAVASGLAQVAQIKA
                     QKFHTGGYVYGAGEVPAILQSGEGVVSRKGMANLDALNGNGPLAKENNQEINIVNTID
                     PSVIESWASSRSGRKVIMNIVKG"
     gene            complement(14406..14576)
                     /locus_tag="RPW04_000901"
     CDS             complement(14406..14576)
                     /locus_tag="RPW04_000901"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294998.1"
                     /translation="MEMFFNACEAKDVGLGLNYAFCKDCAIKNGLEIVDIWGILNQML
                     SAAIETERQKLK"
     gene            complement(14705..15202)
                     /locus_tag="RPW04_000902"
     CDS             complement(14705..15202)
                     /locus_tag="RPW04_000902"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6294999.1"
                     /translation="MIKTSYEIKIKLNDNEFELTINEPNAKERKLLELKRQAGQKDLD
                     RFEAQKVAYEESLRQISHKQEMVTLNLELSKELKGDELVALLKETKELKNQIYAISTT
                     LKEPDFKPLEAGLEDILRYKSELLISGAKKDEFLKSIDELSISYKFLWDEIAKKVGVE
                     SQKKP"
     gene            complement(15213..16139)
                     /locus_tag="RPW04_000903"
     CDS             complement(15213..16139)
                     /locus_tag="RPW04_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295000.1"
                     /translation="MARVLSRAGVKIGVESVAGTYEAPSQVLKLESVVVPEIEFDKVE
                     IPNFSFFGGAKDVVTLADWGQAKLQIKTSLYKNLDFYENLFKICNLKSVRNPVGEDED
                     LVSKTFSPDTHSSATASMDLALPDRLFKIQGAKSDFKLSGKVGEKINAEFNISGAYVD
                     RVIENQNITDVGAGEALLIRRLGGMTLNGTPVNLSEFSFEMGNKISFSKFTNIGEFYM
                     SDYEPKLTLKMRLEAGASDGFDEFKAGSAMSFVAEFKDSEAKTIFKLEIPRAKLSEQP
                     KFEDSDGIFVIERTFMAVSDKGDDNFTLTYFA"
     gene            complement(16141..16347)
                     /locus_tag="RPW04_000904"
     CDS             complement(16141..16347)
                     /locus_tag="RPW04_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009651282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295001.1"
                     /translation="MKWLSLMVFASVFVGCAKETIYKDVYIPVKCQIELESKPAFDGS
                     FESAKELMSYFLRTEKKLKICVGE"
     gene            complement(16344..16661)
                     /locus_tag="RPW04_000905"
     CDS             complement(16344..16661)
                     /locus_tag="RPW04_000905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295002.1"
                     /translation="MGIKTNISLVLISIVVVAGVWFRVYALNSQIDDLTTQLEASKMA
                     TYICENAIASQNEKIKKIELEKLKFSEPKVITQIKYLKPKDDNCSSRLEAYERLFEFG
                     GKE"
     gene            complement(16671..16964)
                     /locus_tag="RPW04_000906"
     CDS             complement(16671..16964)
                     /locus_tag="RPW04_000906"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295003.1"
                     /translation="MSESEVITFLEDLANEYEPSNVSVFFANRTRLSAGKYQATIIIR
                     TIPDMQKASRLTKRLMEEFINGRDIVFERSVMGFVEEKGLRVEDFEVSCEFDI"
     gene            complement(16966..17301)
                     /locus_tag="RPW04_000907"
     CDS             complement(16966..17301)
                     /locus_tag="RPW04_000907"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295004.1"
                     /translation="MNEINVADVREFFSLNGLSDAEITPHLNSAINKFSTKQMAQWDY
                     KEAVCCQTIANCATLLFSKGMNNLESLETIYQGFGDINAFKNLWEDRANALLHKNESA
                     IGAFYWASV"
     gene            complement(17313..>17759)
                     /locus_tag="RPW04_000908"
     CDS             complement(17313..>17759)
                     /locus_tag="RPW04_000908"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phage capsid protein"
                     /protein_id="HDX6295005.1"
                     /translation="NKGWFALAKENAKTTKITYAENSTMLSRLTSLVENANDDVLNGS
                     AIIISKKDLIAYNKEIGNKSGGLSILLNQGANNILGVPLIAANFVKSGEYMLTPLKNL
                     VFSIGLDIRRQRWYDNEESSLKYKFEVFCDYQIGVPEWVVLSTQAA"
BASE COUNT         5300 a         3688 c         2634 g         6137 t
ORIGIN      
        1 taatatcaaa atagaacaat tattatagat aatcttgata ttagttgata ccataattta
       61 agtagtcgaa atcgcatata aggcacgaaa ttatatgaaa tataaattat ttatattcgc
      121 atctctattt attttatttt ttacatttac taattacgtg attgtgtatt tatatatatt
      181 tgatttacgt tccaatggtg tattttcttt taaaaatttt ttactagaaa caaccacaaa
      241 ctataatcgt attatcatag atagcggttc aaattcagtt catgctatag attcgactat
      301 gtttgaaaaa gcttttggga aattgactat aaacatctcg gataatgcag gatatccttt
      361 gcaagacaaa ttagccagac ttcaaaaatt tactcataaa ggagatatag ttttgcttcc
      421 gcttgagtat tattattata tggatgaaaa tccaccccca aaaatatatt ttgataatat
      481 atttgggtct ttgcattttt attttgatag cctaaatttg gctcataaaa ttcaatttat
      541 tttaaactct cctcctagta gtcttttaaa agctatcttt accaaaagtc aaaaatttga
      601 tgattcaata cgcttcacaa atgaattttt aaacggcaaa agaggcgact acgaatttgt
      661 acaaaaaagc aaacccgtaa aagaactaga atatatgagc tgtgaagagt atatatttgg
      721 ttcagaaatg agcattagtc cagatagatt aagtaataaa tttaaaaaaa atataaaatt
      781 tatcaaacag attgaaaata gaaatggagt aaaatttgta tttacatatc ctgctgtagc
      841 gggaaacgaa tgctacaatg gaaaactcaa agataatttt cttattttta acagagctct
      901 tagaaaattt atagatgaaa atggtttagc atttgtggga tcaccttacg cttttccata
      961 cattcagatg gataatagtt actatcacat acttcctaaa gccaagcaaa tacacactca
     1021 aaatttaata aactatatca aaaactcacc atataaagat atatttttga gataatattt
     1081 agccagtaac aatactctaa gataaacatt accgatgaac cctaaacgca ggagacgcaa
     1141 gtacttcggt aaaagcaggc gatatagctg cagatagcgt aaatgtagat ctttctaaag
     1201 tattaggtac ttgtaaaacg ctttttaaaa tcaaactact tttagcttaa aatcaaacta
     1261 cttttaaaaa gtcataaaaa atagttcgat tttaaacgca aataaatctt ttaaactcct
     1321 ctaaaaattc ctacaaatct acctattatt ttgcattcgc attgccaaaa tcttactggt
     1381 gtatagattg ggttgtatga tactagcact agctcatctt cttgcatgta gcactcttta
     1441 attgctacac catcaggcgt attaaccgca tatacttcgc cgtccttaaa tggcactcca
     1501 acccctatca tacataaatc accttccata atgtggggct ccatgctgtc accgatacag
     1561 tttatcatgt gaatttcata tataccctta acattgctta ctagtttatc cattattttg
     1621 ttatccatta ccacatcttc gtaatcttca tcatcattcc aagcaccacc accaagacta
     1681 gctttgacat caaaaagctt aagcgtttta tatctcttct cagacttttt taaattcccg
     1741 ctttcttggc caaaaaagaa taaatttata gatattttgc gttttgctaa aaagtatatt
     1801 atctgctcat acggcaccga atttctaaat ttcatttgag cataagcatt tggatttatg
     1861 ccaagagcgt tagctacatc tacatctttt acacttttac catctgtggc tagaatatct
     1921 tttagccttt ctgttatgtc tatcatatcc atttttactc cttagatttt attttgtaag
     1981 gattttacta taaaatcaaa aatctttgta gaattattat atttcataag aaaatgcccc
     2041 aaacgacagc caagacacag ctaagccaag ttatagtaca ggtataaaac aaaggagata
     2101 aagatgatag taacagtaaa taagtatgga gatagtatat ataaaagcat aagcgagtat
     2161 aaggactttg attttaaagc aaatacttgc gtagcagtaa taaaaataga aaaagtaaat
     2221 ccaaataagc gtggaagcat aactactata gaagagcgaa tcatcaagct aagccaaaga
     2281 gctttaaaat gggagctaag cagatgcgag gacgacatga actcaggaga gcttgataaa
     2341 ttttgggata accacataaa taaaaataaa agtttacttg tgctaaaatt gatatttgtt
     2401 aagagtcttg ataaaagagt tatattagaa tatttacggg ataatgggat tgtagccagg
     2461 gatagcggac caagaccatt tcatatactg agtgatgaag aatataacaa gataatagag
     2521 agagctgata caaatatatc ttatcatgat cggacgaggg atgagtaaaa ttattttatc
     2581 tataaggcca gaatatacaa aaagaatatt agacggagat aaaaagtacg aatatagaag
     2641 agtgctagca aaaaaagatg taaagactat tcttatttat tgcacacatc cgcttatgaa
     2701 agtagttggt gaggtagagg ttgagggtgt tatatccacc agcccatgtg atatgtggaa
     2761 tagaacaaga gataaagctg gcataagcga taaagatttt tttaaatatt ttgatggtgt
     2821 aaaaaatgca aatgcgtata tacttggcaa ggttaaacaa tataagaaac caaagcagtt
     2881 agtttcaatc gggataaaaa tcgccccccc cccaatcttt ccaatatata aaatagattt
     2941 tataatcttt taaacactat ttaaaggctc tttaaagagc ctttaaaata ttaaaaattc
     3001 ataatcaaaa gctcacttct atcgcctcta ctttttgcat ttagactata atttactttt
     3061 aattctttaa ggttaaagtc tttatacaga tcgcggacca cttcacagtc attgtagcta
     3121 agcataaatt taccactaat ttgctttaaa atcttggcta aattttcatg ctctctcatc
     3181 gcaaagccat ttaccatctt gtaatagttt tctgtgccca cataaggcgg atctacgtaa
     3241 aaaagagtct cactgctatc atactcttta ataagctttt catagcttaa attttctatt
     3301 aaagctcttt taagacgctt tgaatgcaga taaaaatccc tataaatact cttgccactt
     3361 ctacttttac ccatcgcaaa attatctcct ttcgcaccaa agctagtagt aagaagatag
     3421 aagtaaaatg cagctttttg gatatcattc tttggcctca gtctgccatt tttgatatca
     3481 tcaaatatct cacgacttct aaatagtgag ttcatttcag cctgcaagct tactggacga
     3541 tttctgatta tcctgtgtag attgatgaga tctgagttga tgtcattgac gacttcaatc
     3601 tttgaaggct ctttttggta aaagactgag agtgcccctc caaaaacttc aacatatctt
     3661 gaatgttctg gcataagagg tataatctct ttagctaaca aggcttttcc gccaacccaa
     3721 ccaaacggag cgcgtaagcg tgtagttcta gggcgtagct ctgcgtagct ggacaacggc
     3781 gctttaagcg tagttctttg catgtttttt ccttacaaaa aataaaattt tgctacttct
     3841 ttgcaaggat tgataaaatt acgttgctac ttttttgcgg tggtgtagct atattgctac
     3901 accgcatttg ctcttttctt ccaccctttt aaataaacta cgttcgaagg ttttttgtac
     3961 gctaagcttt cataatattc gatctctagt ttatcgtact gcaagctaaa tttatcttca
     4021 tctatagagt ttaaagccct taaagtctgg attccaacaa cgccatctag cccagctcca
     4081 actatctttt gtgctaactt aacggctgtc tttatgcctg cgttaacacc aaaacaaaat
     4141 agttcgtctg ctattatctg actttctaca gcgtttagcc tcattttatt ccaaaattca
     4201 cgctcataaa aatcaaaaac catctctttt agggttgtat ttgcatataa aacctcagat
     4261 gcatttttta tatcaatatt ggcagatagg acgtttttta cgatattcca gccactccaa
     4321 ctagggtgtg caccttgata gatacccata aaagtaagcc cttgttctgt tttattttta
     4381 tgcaagacat cactactaga gccaaactca agtctcatta aaacgcccat acttttttta
     4441 aagttcgcca ttattttcac ctcttttgcc tttatctaca agcgatataa ggcgtttttc
     4501 gtaaacaagc aaagcatttg ttccagccca cccgctcacc ccagcagtag ctatagaaat
     4561 gccaagtttt tcgaaaaaaa ataagccact tcaaagccta tatatccagc aaacatagcg
     4621 ctaaaacaac caaaaagcag cccaaatatt ttacatttta ggctgctttt gcattttttt
     4681 agctcttctt tttgtaccat gccaagaata ccacctataa gcccaataaa aatcacgtat
     4741 ttatagactc cagcactatc catcatcttt tcaagccaat tcaaatttac tccttttaat
     4801 caaatcccag ccaaatatgc gaaatacggt aacaaaaata ccccaaatct aactatgcct
     4861 tttttaagca tcagtctgat aaaaagaggt aatttaacta taatatggta tttttttaac
     4921 ttcaccattt atttttacct ccaaaaatcc agctatttgc cccagctcac cactagcttg
     4981 caaaccacca cttagctcca catttgccac ctttagcttt tttgcgctaa tctccgtgtt
     5041 cccaccacta agcttggtat cgatctcatt ttttgtgtat aacttcgtga agttatcatt
     5101 gattatgata cgccacgcag tagccccaag ctccattgtt tgaagtccat tatttaatac
     5161 tgccatttat tctccttatc taatacttat gttaatctca tcactaaaat acccaccaag
     5221 aacgcttttt atgtaaaaag tcgttgcagt ggttgttatt tgggcgttta gtttatctgt
     5281 ttttaccacg ccgccactgt atcttatctc ccaagctccc tcacttttgc cctcatcttc
     5341 accagctact atcgtgtcac agttgcggaa atttgctcca gcaagtctga cgcaaggcgt
     5401 ccagcttaaa tttaccacgc caccatctct aaatccttgt atatttgatg gtgtgtatgg
     5461 cttttcgacg ctaaatttat acttatagct caaactttta gtctccgtga catttatata
     5521 gttttgtgct actgctttta tagtaggctc agtagttacg ataggcaaaa tcccaacctc
     5581 acttccaatg tcttcacata gccatactct tgtaccgctt gaatggtatg attttttggt
     5641 attattcatc ccacgcataa tgcgtttaat cctaaaaata tttggctcat tagtcgtctc
     5701 aataatgcca taagcaaact gctcatctcc aataaatcca ctgaatttaa ctctttgcca
     5761 cctaagttca gttgctacca taggataaag tgggcttata gctcttacca aaaatccgtc
     5821 ctcatcaatg tcgctagtag tattatatga gttcaccaaa gtagctagta aaaagcttga
     5881 agcatttgca atgtcatcta tatcgccttc gctgacactg atattttgca cgaatccact
     5941 aggctttgct attagtggga ttaccgctct acccacgctt tgctcggctg ctgcatcacg
     6001 acactcaaaa tactctatct cgcctatatc aaggtttaaa cgctcactta gatcttcttg
     6061 ctcaaggctt aaagtagcat tactaagccc aaatatatct tctatggcct ctacggtaat
     6121 acccccatca tcttgtctgt cagagcctaa actagtaatg cgaaatacta tatcattaac
     6181 cccaagttca ctgctagaaa agaaaaaaac atcacctatt agcatctgtt caaaaacaac
     6241 ctcgcttatt ttaaagctaa tagtagagac tggatagcta atctttttaa aaagcctatt
     6301 cattacatta gaagcattcg taccagaagt aatacccatg tattcgacgt cataggctct
     6361 atcataccca agcgcaagac gtgcagctgt atttgtagcg ctaagactag cacttttaaa
     6421 tgtgcttcta tctgtatatt taacagtgat tttggtatat aactcatccc agctcttttt
     6481 ggtgagttta atcttgcaag cattagagct atcaactttt atcagtgagc ttatatcata
     6541 tcccccacgc aaaagcctta aatagagtag tccatttttt acgattatta caccatcaat
     6601 agtacgtaat atctcttcta tccattcatt tgcctcattt ggattgctca tagtcaaact
     6661 cataccaagc ccttcatctt ttagctgcct tgctactgct tgaaatgatg ccaaatctat
     6721 actagaactt tcatacccta ccaaaacgct aagtaaataa taaagcatac tagctggatt
     6781 tgcgtcgccg tttatatctt ccacacttcc ccagcctagt aaatttgtgc gttttaaaac
     6841 aacgctatag cttggagttg cagtagtgtt ctcgcctata aatccatgaa atacaaaata
     6901 tgcagtcccg ctatatgcca tagacttgcc acaccacctg caaagtgctg catctggagt
     6961 ggtttgtttg ccattgtaag catatatagt gctttttggg ttgcttgact cttgattttt
     7021 gccagtacga gcactaaaag ttccgtttgc ttttagatta ggcgagctca taacatcacc
     7081 attcatttta aatgctttta gctcatccca gctagtacaa agtgcgtaag ctagacccat
     7141 ataatacgca tatcctaccg tttggctttt accttttcca gcttttttct ctatagcata
     7201 actactaagc tgtcctgcat agatgatatt gccatggcat tcaacagtgc caaatatctc
     7261 tggtatcagc ctagagtttg agtttgttgg gtaggtaaaa tcatcaaatc cagccgcctt
     7321 tgcatcttgc atttttgcag tcggcataag aaaaaaagca gctgcaaaag ctactactaa
     7381 aaatgcagca aaccacatat taaaatccct ccgttactgg atttttagct gggacaaaag
     7441 caaatccacc gtaatttact agattgttaa atttagtctc acaagtatct attcttttat
     7501 cacatcctgg atagacctta ataatcccat taaatgcatt aggaattggg aaaagtagct
     7561 ccaaagtatc atcattatga gctacaatat ggctttttgc ttcgccaaat tctatatatc
     7621 ccaaagcaaa atacccgctt ttaaaagcct ctatttttgg tgaagtcagc ttaaatctgc
     7681 tctcatctaa ctttatatca tgctcaaaaa gatataaggc aaaatcctct ctttttaatt
     7741 tgcagtcctt gctaaaaatc tcaaaagggc aagacctaga ataagttctg cttgggattt
     7801 tgctttttag catacctttt agcgtaatta gcttgagttt tgctatgcct gcgtctatat
     7861 caaagctaca tccagccact cgcccataaa atatcattac accgttttta actattttac
     7921 accacactgt agtagctgga ttaaacacac gaaactcagt agctggaaac agatctaaag
     7981 gcatactaat atttgcctct tcattgtcaa attctttatt tatctcatct cttgttattg
     8041 gggaagtatc actatcatag attatctctt ttgccccaag actaaatgta tatacttcac
     8101 tcatctataa cctccttaaa gctcatatct actttatacc tattagggct tattttcgta
     8161 gctcttaaag tatcactatc aaaccttact ttgtagcaat tttctagctc atcatctttt
     8221 tcaaactcat ctatcccact ttttagatat atttgatcaa cgccattacc aattattaca
     8281 ttttgaatct cgtatatacc ttttgtgcga cgattgtata taaatgccct tcttgcatag
     8341 actccaaatg tcttatttga gctaagagtt tgcagggctg atgagacgat attgacatta
     8401 tcaaaatcaa cccttaaaga gcgtataaaa aagcttccaa ctcttgcttg ttttgatata
     8461 aaaaaactct caaaagctct aagcttagcc ttatcaaaac taaaactaag actaaagcta
     8521 agtctagtat cgcttggtgc atatttgcta acattcctat attctttgcc aattaatgag
     8581 taagagttgt ttatagacac tcctatatct ctaagtggaa tgaaactaaa gatttccatt
     8641 aatcacactc cttcatctca agctttagct ctagtgtgtc tttagagctt cttgataggc
     8701 ttgtttgttt tgctattgtt gctttaaaaa gtggggctat gatatcgcct ttgtgaatat
     8761 caaccatatc gtctatgctg atacttttgc catttatctc taaaaccttt ctaaatattg
     8821 gatctgcata ttggcttata acagtgataa atttaccgac ctcaaactcg caaaattctg
     8881 gcacttctaa acttgtcgca ccagagatat caacgctagc aaaaaaagca ctattccata
     8941 gtggcactaa aagattttgt ttagctccgt atgacaaaag ttccatgcaa gagttgaggt
     9001 ttaaactgct tttaaaaatg agtttaaagc ctgtattgat tttacacttt ttagctagag
     9061 cgactctttt ttcattacct ttaagtgctg tgaatatatc tgtttttaag ctcttctctt
     9121 cataatactc atcgtttggc acgaatgcaa atatcacgtt tcttttacca gcgaagctaa
     9181 aataacagcc aaaatcacta aaggctaaac ctaaatttgc cttcagttca atatctccaa
     9241 aagtaagagc cactacgcta aatgtggttt gctcatatgg atatatcttg tttcctatac
     9301 ttatatcttt tatatttagt ccggcaaagc cttgcatatc agtattccgt aggacttgcg
     9361 tatttcttga attgttaaaa agagtgtagc taatactctt aggctctgta atattgccaa
     9421 agtcatggtg cgtgatatat ggagagatat aaataccatc agggtaatag atgagataat
     9481 gcatatttgt ggtatgagtt tttgagatat aagtatagct tggatgagaa gtttttagct
     9541 tagctgtgcc taaatttact ccaaaatact ggctatcatc taaaaaagat gtacttacac
     9601 ctacaccatc aattagtcta atctctatct taaccaccaa ataaaaatcc gtaataccaa
     9661 ggtctactac catgtattta atgctgccac gcataagtat ctctccttgt tttaagccat
     9721 ttttaggtac gtaaaacata tctttaagat acccagcaac cctactagtc ccgtctgtat
     9781 gcttgtaaaa aacatatata cgcataaatg ggataaaatt atcattttta aaagcatttc
     9841 tgtatggaca aaaaaatcca attggatata atggtcttat aaaatttcta ccattattaa
     9901 tctgtgttaa ggccgggtta taaaaatcac cgactggcgc ataagaatat ttttgtatcg
     9961 gatctggtct aaatacatca tttgtccgtc ttacagccca taagagagca ccacttgtaa
    10021 aattatgatt tagccttatc atatagctaa gaactccacc tataactata ctataaccca
    10081 aaaaactaaa actagtaata atactcctat catcagcaaa gatcatgtat tcttttacta
    10141 ctgcgttttc ttcagtttct ataaagaaga aagtttgcgg tgttaaagag gtggtaatat
    10201 caccggaatt cataggagct atactagagc tactatactc atctacgtaa tgacctatat
    10261 ctataacgta taaatttttg gccagaccaa taagaatctt ttatgcgtcc agatactctt
    10321 agatatatta catcgccttg caagctttgc ataaaagttg ttttaccatc gccaaattta
    10381 taactaatat tatgtgcctc attatcttgt cttaaaagtg tccagccaag gctttgtaaa
    10441 aaggtgatta tgtctgcata cacatcatat atatttgcgt tttgtccttg aatgtatttc
    10501 attttattcc tttataatag catagcaata tgggctaatt agttcatttc cagcagttac
    10561 tatcttgtaa ttatgtccat cacagctcac atcatcaccc acacttacac cacttccaag
    10621 tatgatagct ataataccat ccatgtcgcc taagagtttg ctttctacat ctttatacga
    10681 atataaagag agagctctag ccctttcttg tatggtagag ccaagagaac tactgccatt
    10741 gtatttacca aaataacaga ctataagagg cgtacaaaat ggttcatcaa ggtcgccata
    10801 aagattgtct ttagtaggcg gataagccca gcacggatga gttatacact gctgatattc
    10861 attattatac ttagcatatg gcaaagatat atgctctttt gatgcaagga ctgctactct
    10921 actagtccca ctagcaaaac acaaaaatgg atcaggggat atctcttcgc catatggacg
    10981 aagcaagccg atataaaaag gctgccaagt tatattattg ccattttgca tactaaaagc
    11041 cccacaaata cgtctatctt gtaagcttat atagtagtta ttaacacctt tatttagcat
    11101 tgctatagcc atatttggca tcgctccaat ttgagcgtag ctatctatta tcgctttttt
    11161 gttctcatta aaactcttta atggactcat atgcaagaag tatttgtcgc cataatcttc
    11221 taaaataaac atatacaaaa gctctttgtt gccaactgac tttctaagta taagctcacg
    11281 gtatatatag ctcccgtttt ctaaagtgat atctactcta tattgaccat ttgcttttat
    11341 atgtatacct ctgtattttt tattagtagg tgattctatg gtcactggat tagtcgcaga
    11401 gactatatct gtgatttttt ctgttgaatt gtcttcgttt atgccaataa tttcgccatt
    11461 tatagttgat agataatttt taattacaat ttttttaaat aacacatctt tggtaaaaat
    11521 gatatttgat tggtaatcat aataagaaga gttaatatct ttagcggtat ttaggtaacg
    11581 acttgctcca cttttcacat tatcaatctg cgtctcaaac ccgccaatat caaaataatc
    11641 attgacgttt gtgacatcta atgttctatc actcacactc tcatatccag cctctaatgc
    11701 ttttgctttt aaaacatcta aaaactcagg agcactactc acacttcctt caaaatacat
    11761 ttttatcctt ttactatatt cattatgact tttctaccgc ttctactact agcccagctc
    11821 tctatcacac ttggatctat agtatttacg atatttatct cttgattatt ctcttttgct
    11881 agagggccat tgccatttag tgcgtcaaga tttgccatgc ctttacgact tactactccc
    11941 tcaccgcttt gtaaaatcgc tggaacctca ccagctccat atacatatcc accagtatga
    12001 aacttctgag ctttgatctg tgctacttga gctagcccac ttgctactgc tactgctgcc
    12061 atagctgcac caagataagg gttaccagct gttgccattg cgtttgtggc tgcggtatag
    12121 gtatttacaa tagccttgcc caccatgata gcttgatatg ctctcatagc agttttactc
    12181 tggttgccac tggccgcata aaatgactga gctaagctac caagcatatc aaaagtagct
    12241 ccagcagtgg ctacttgtga gtcgaattta gccttttcta gctctttcat cttgttttca
    12301 tgattttctt tgcttgcctc tagtcttgcg tagtgagctt ctatcctact attttctgca
    12361 ttttggaagt catctatggc ctttagtcta tctacaaatt catttgctat ccccatatct
    12421 tgcccactat ttaaagcatc gtaattagct cttttttgag tattgccata taaagagtcc
    12481 gctatatcag tatcactagc tccggcattt tttagcctaa ttgcctcaat gtcggttcgt
    12541 atgtttgctg ctttgttttt ttctcctatt agctcataat aatccttgag atattcaagt
    12601 ttttttatat tggcagcttg ctcttttttg gccgcatttt cttgcacctg ggctgttttg
    12661 ctagctaccc attgttctat acttactcta tctacgccat atttttcgta ctctttagct
    12721 ttttgattga tgagccttgt ctcatagttt agctcatcat tttttagctt ggataaatct
    12781 ttttttatct catcttcggc ttttaggcga ttagcttcag ctttatcaag ctctagatat
    12841 actctttttt gagcttgtaa tactgctgtt ttttgctcca cgcttagttt tgaattttgc
    12901 agctccgtgc ttaattgttt ctctttgtag ctccatgcag ttgcatggtc gcctatggat
    12961 ttgtagtata attcaaggtc tttatactct tgtattagct ctttgttatc tactttcgtt
    13021 ttttgtttgg cggctggttt ggcttttgcc atatcttcaa aaccatcttt tgaaacgcct
    13081 tttaactcag ttttaaactc ttttaaatca ttaaataaat tcttttgagt tacagtgaca
    13141 ttttctatca tagaatccac gctttgccac tcttttagca aggtatcact aagaccatct
    13201 atttttaaag catctactcc gaaagtgtcg gctactttag cactcaaatt ctcaacaccc
    13261 aaagcaagtg cagttggtat gctaagtagc gttttgtaga tgttcgcacc gataaatata
    13321 acctcgctac ccataagctg gagcgaacgc acgaagtcat ttgcaaactc tattatctga
    13381 gctttattat ctctaacttt atcgctccag taggcaatag cgttagctac ttcactcgtg
    13441 ccaccactta cgctatcaaa agccaccata agctccgtat agctgttttt agcatttgtt
    13501 agggcattgc ttatacttaa gcccattttg ttaaattcag aatctatctt ggccgcagag
    13561 ttttgcaaag caccaaatac aacctcagca ctaagctttc cagctgcgcc ataagcccta
    13621 agctcaccca tgcttatacc cataccctct gcaattgctc tagctaggcg tggggtttgc
    13681 tccattacag agtttagttc ttcacctctt aaaacaccac tagcaaagcc ttgtgagagc
    13741 tgaaaaagtg ctgcactagc tccacttatt gttaaagttt tatttatcgt ttcaattaca
    13801 cttagagttt gggcattgct tttgccaagc tcaccagtag cagtagcaag agagctaaag
    13861 acttcagctg tagcgttaaa gcttgtgctt gtagcatttg caatacgaaa gagctcacta
    13921 tttactgcgt ttagttcact tgtacttttt gtgacaagcg atattctatt actcatagta
    13981 ttaaactcat cagctgtttt aagatagcta ataagtggtc cgctaagagt ctcaaaagca
    14041 cccctaagcc ctaaaactgc attataacca taagttaggc tttgcgccat atcttttgtt
    14101 tttgccccta gtgagctgac actttttgtg gtgtcattta tgctactact aagccctttc
    14161 atactagaag tcacgccttg ggcatttgag tttatttgaa tttgaatttc tactttttca
    14221 tttgccatat ttttgcctaa atttggtata atagttaaat agtctgccaa gacctgacac
    14281 aatacgcata aaaaggaaat tgatgggttt ttttgccata ttttttataa ttctcttgct
    14341 tatcattttt aaaagaaaac tcccttttgc tttttggctt ttggccacca tctttagcgt
    14401 tgcgcttatt ttagcttttg gcgttcagtt tctatagcag cacttagcat ttgatttaaa
    14461 ataccccaaa tatctactat ttcaagccca ttttttatcg cacaatcctt gcaaaacgca
    14521 taattcagcc caagccccac atcttttgcc tcgcaagcgt taaaaaacat ctccaccata
    14581 aaagcttcga attcatcttt gatataagcg atatttctat catcaaaaag ccttttttct
    14641 tcatcgtttt gcgggcttgc aagctcgcca tttattatgc acgttcttac aatttcacgc
    14701 agtcttaagg ctttttttga ctttcaacgc ccaccttttt agctatctca tcccataaaa
    14761 acttataact aatactaagc tcatcgatac tttttaagaa ttcatctttt ttagctccac
    14821 ttatcaaaag ctcacttttg tatctcaaaa tatcttcaag cccagcttct agtggcttaa
    14881 aatcaggttc tttaagagtg gttgaaatag cataaatttg attctttaac tcttttgttt
    14941 ctttaagtaa tgctactaat tcatcgcctt ttagctcttt gctaagctcc aaatttagcg
    15001 ttaccatctc ttgcttgtgg ctaatttgtc ttaaactctc ttcataagcc accttttgcg
    15061 cttcaaacct atcaaggtct ttttgcccag cttgtctttt tagctcgagc aactttcttt
    15121 cttttgcatt tggctcattt atggttagct caaattcatt atcatttagc tttattttta
    15181 tctcatagct tgtttttatc attgcaaaac ctttatgcaa aatatgttag cgtgaagtta
    15241 tcatcgcctt tatcactaac tgccataaat gttcgctcta tcacaaatat tccgtcgcta
    15301 tcttcaaatt taggttgttc gctaagctta gctcttggaa tttctagctt aaatattgtc
    15361 tttgcttcac tgtctttaaa ctcagcaaca aagctcatag cactcccagc cttaaactca
    15421 tcaaatccat cactagctcc agcttctaaa cgcattttta aagtgagttt tggctcataa
    15481 tcactcatat aaaactcgcc aatatttgta aatttagaaa aacttatttt attgcccatt
    15541 tcaaagctaa actcagagag attaactgga gtaccattta atgtcattcc accaagtctt
    15601 cttataagca gtgcttctcc agctcctaca tctgtaatat tttgattttc tatcactcta
    15661 tctacataag ccccgctgat attaaactca gcatttattt tctcgccgac cttaccactg
    15721 agcttaaaat cactctttgc accttggatt ttaaaaagtc tatctggtaa agctagatcc
    15781 atactagctg tagcgctgct atgagtatct gggctaaatg ttttgcttac tagatcctca
    15841 tcctcaccaa ctggatttct aacgcttttt aggttgcata tcttaaaaag attttcgtaa
    15901 aaatctaaat ttttgtataa acttgttttg atttgcagtt ttgcttgacc ccaatcagct
    15961 aatgttacaa cgtctttggc accaccaaaa aagctaaaat ttggtatttc taccttatca
    16021 aactctattt cagggacgac cacgctctca agcttaagca cttgagatgg ggcttcataa
    16081 gtcccagcca cgctttctac gccaattttt acaccagctc ttgataatac tcttgccatt
    16141 ttattctcca acacatattt ttaatttttt ttcagtgcgt aaaaagtagc tcataagctc
    16201 ttttgcactc tcgaagctcc catcaaatgc tggtttactt tcaagttcaa tttggcattt
    16261 gaccggtata tacacatctt tataaattgt ctctttggca catcctacaa aaacagaggc
    16321 aaaaaccatt aaactcagcc atttcattcc ttgcccccaa actcaaaaag cctctcataa
    16381 gcttcaagtc ttgagctgca gttatcatct tttggcttta gatatttgat ttgagttatt
    16441 accttaggct cactaaattt aagtttttct agctctatct tttttatctt ttcattttga
    16501 ctagcaatag cattctcaca aatatacgta gccattttac tggcttcaag ctgggtagtt
    16561 aaatcatcta tttgagaatt taatgcatag actctaaacc atacaccagc caccactact
    16621 atgcttatta gcactaaaga tatatttgtt tttatgccca ttttctctcc ttatatatca
    16681 aactcacaag agacttcaaa atcttctact ctaagccctt tttcttccac aaagcccata
    16741 acgctccttt caaaaacaat atctctaccg tttatgaact cttccattag ccttttagtt
    16801 agtctgctgg ccttttgcat atctgggata gttctaataa ttatggtagc ttgatatttt
    16861 ccagcactta agcgtgttct atttgcgaaa aatacgctta cattgcttgg ctcatattca
    16921 tttgctaagt cttctaaaaa cgttataact tcactttcgc tcatatcaca cactcgccca
    16981 gtaaaaggca cctatagcac tttcgttttt atgaagcagg gcatttgctc tatcttccca
    17041 cagattttta aaggcgttta tatcgccaaa gccttgatat atcgtctcca aactctccaa
    17101 attgttcatt cctttactaa aaagcaaagt tgcgcagttg gctatagttt ggcaacatac
    17161 tgcttcttta taatcccact gtgccatttg ctttgtgcta aatttgttta tagcactatt
    17221 tagatgtggg gttatctcag catcactcag cccatttagg gagaaaaact ccctaacatc
    17281 agcgacattt atctcattca tttatgactg ctttacgctg cttgggtact tagcaccacc
    17341 cattcaggta ctccgatttg atagtcacaa aatacctcaa atttatattt aagtgagctc
    17401 tcctcattgt cataccagcg ttgtcttctg atatcaagac cgattgaaaa taccaagttt
    17461 ttaagtggag ttagcatata ttcgccactt ttaacaaaat tagctgcgat aagaggtaca
    17521 cctaaaatgt tgtttgcccc ttgattgagc agtatactta gcccaccact tttattgcct
    17581 atctctttgt tataagctat caaatctttt ttagagatga ttattgctga gccatttaac
    17641 acgtcatcgt ttgcattttc taccaagcta gttaaacggc ttagcattgt gctattttca
    17701 gcgtaagtta tctttgtagt cttagcattc tcttttgcta gagcaaacca gcctttatt
//
LOCUS       DAPPKW010000029        17708 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.029, whole genome shotgun sequence.
ACCESSION   DAPPKW010000029 DAPPKW010000000
VERSION     DAPPKW010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17708)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17708)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17708
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.029"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            270..551
                     /gene="yajC"
                     /locus_tag="RPW04_000909"
     CDS             270..551
                     /gene="yajC"
                     /locus_tag="RPW04_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDX6295006.1"
                     /translation="MPEIVSSLLPLIVLFAIFYFLVIRPQQKQQKEHRNMLSNLQKGD
                     KIVTNGGLFCEVVKPEDDFIKVKLNDEVIVRIDRNFVAKKIDKIEKSDA"
     gene            544..2133
                     /gene="secD"
                     /locus_tag="RPW04_000910"
     CDS             544..2133
                     /gene="secD"
                     /locus_tag="RPW04_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HDX6295007.1"
                     /translation="MLKGRVTYRLVIFILALIFGLGFSMPSFLQSEKGYKISLGLDLQ
                     GGLHMLLGVQTDEAITSKIKSIASSIRYFTNKNDILVENLKTDTDTVHLTILDSDEAK
                     KIDEMLKGIKGLDIKKDGLNYRISLTAAEKIDTAKYAVDQAVETIRNRLDQFGLAEPT
                     VAKQGENQILVELPGIKTAADEQRAKDLIAKSAHLQLMALDEKRQDQANKMTEAEATA
                     YGDVLYPDVKNPKFKYLIKDIPVLDGNMLVDARVAFDNQTNSPIISFTLNAEGARIFG
                     DFTGSNVGKRLAIVLDGKVYSAPVINERIGGGSGQISGGFSVEEAHDVAIALRSGALL
                     APVNMLEKRSIGPSLGQQSIDQSMVALAGGAILVVLFMVLIYGLAGVLANIALVVNIL
                     LLVAVMALFGATLTLPGMAGILLTIGMAVDANVIINERIRELLKAGQSVHVSIEKGYK
                     NAMSAIIDSNLTTLITSAALYAYGTGPVKGFAVTMSIGILASMLTAILGTHGMFEFLG
                     KKIENNKNSVLWFGYKIRKVA"
     gene            2133..3104
                     /gene="secF"
                     /locus_tag="RPW04_000911"
     CDS             2133..3104
                     /gene="secF"
                     /locus_tag="RPW04_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HDX6295008.1"
                     /translation="MQIFDNGRIYDFMGKRWLFFCFSFILFFGSIVLICTKGLNYGID
                     FSGGTLIQVKYEGKAPLDDIRDKLAANEVLKNANVTEFGSDEEITIRYSGSSDSLGSD
                     PGAVVTSILEGTGKFEIRRVDVVGPKVGSELRQKGLMAIGVSLILILIYIGVRFEWRF
                     ALAAIISEIHDVVITIGAISLLSIDVNLDTLAAVLTVLGYSLNDTIIIFDRIRERVKE
                     SKFIKLNDVINESVSLTLSRTIMTSITTLLAVLVLFFFGGDMINGFSIIMLIGIIIGT
                     ISSVFIASPMLGWFKFSVDHYRSHLAAKEVKRKEKERIRAMYEKGTI"
     gene            3114..3452
                     /locus_tag="RPW04_000912"
     CDS             3114..3452
                     /locus_tag="RPW04_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295009.1"
                     /translation="MNWGKVIYTFFALMSLTTTAGFLYDKSEITLFIAASINLISTLL
                     KIGVRNMLSAELFASSLVADLHLIPAFVLLVIGANEVIVYSLVIGGVIANIFSMFLLL
                     TEASKIRDEF"
     gene            3461..5896
                     /locus_tag="RPW04_000913"
     CDS             3461..5896
                     /locus_tag="RPW04_000913"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDX6295010.1"
                     /translation="MEYNAKNIEYKWQQIWKKNGYSEPKDDYSLPKKYILSMFPYPSG
                     RLHMGHVRNYSIGDALSRYYRNRGYNVLQPIGFDSFGMPAENAAIKHKIHPKIWTYDN
                     IDYMTKELDALGFSFSKKRLFATSDPLYTRWEQEFFIRMYEKGLVYRKSAVVNWCEND
                     QTVLANEQVEDGKCWRCGHEVIQKEMPGYYLKITDYANELLECLKDLEGKWPNQVLTM
                     QENWIGKSYGLEFEFKFDSSSKILLDGMDGFKVFTTRPDTIYGVSYAAIAPEHIVVKK
                     LLEKNILDDATSAKLKFILNQSPKQRQSIDKDGVSLGLNVIHPLTNELIPVWCANFVL
                     AEYGGGAVMSVPAHDERDFEFASKFNLNIKQIIKSDTLPYCEKSGVYINSELINGLAY
                     EEAREKIISKFEKEGWGNRVTNYKLRDWGISRQRYWGAPIPMIHCKKCGVVPENISNL
                     PVKLPDDVVITGEGNPLDKHSEFKNCKCPKCGSQATRETDTMDTFFESSWYFARFASD
                     EKTWEDVAFDKKSVDYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLRDCEPFDS
                     LLTQGMVLKDGSKMSKSKGNTVDPDDIINKFGADTARLFILFAAPPQKELEWNDSAVE
                     GAFKFINRLYDRSDNAYKTEILPQINHSNLNKDEKYARLKVYEALKKSTDVFENSFAF
                     NTLIAACMEALNGLNAQNNKDIWTEGYFIILNLLEPIIPHACHELSNELFGLKNFTKL
                     SLKDEVFVKDSLNLAITVNGKRRSEIEVSAFESDDKILEIAKQEVSKWIEGKEILKEI
                     YVPNKLVNLVIKG"
     gene            5898..6437
                     /locus_tag="RPW04_000914"
     CDS             5898..6437
                     /locus_tag="RPW04_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HDX6295011.1"
                     /translation="MKTLLNLIVVLFFLGCGYKPVSVITANVLDESVWVDVIMSKTDP
                     ENTVAIKDSVREAMIKRLGRNLTTKEEANSIIIASIKSLTFNAILYDQFGYVTAYKTN
                     LIVDYKVKLKNGDIKYITTSGDYDFRITKRINNTRFTDSVISDKDRFEAIKNASLQSF
                     DEFISRLAIEGLRDGKYSK"
     gene            6418..7962
                     /locus_tag="RPW04_000915"
     CDS             6418..7962
                     /locus_tag="RPW04_000915"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDX6295012.1"
                     /translation="MASIVSEVIKDVILEANSKKIVLTPDNYHMLFCEAARRRGVSVE
                     DCKKLEKYISKLDKMYQDELKKMNVRNLDELFAFISSRLNRINPSDFTKLTQAFTLLT
                     KRILQSISLLHNKQARNLANISVQTIDKKISIENINIIKDKWFNFLSDYNDDYLKKLE
                     QYGIKNSDDLEGIVSKLLNAKFTPSSEDKDYTKLAELMIAALVPSIASSMNDELAAIS
                     DEIRAKPELLQSDGMQNDIKKFILKRVDLDKSEVKQKIVILDRILDDINEQIKYFISR
                     VAQNENGISSIKTDLDNIRSNDDYIVVKEKLLHVSNSLEFEIKDFLAKLIEDKKTISN
                     LKARVKELEDMLLQAKEEISSDYLTNVGTKRAFEIELANIEDVYKRYKIDYSICFFDI
                     DHFKIVNDNYGHEAGDTILSTVGKILKKQSRDIDFVGRYGGEEFVVIMPETSKDNAIL
                     FAKNILSNISNFKFLYRGEDIDITISCGVASRKDSKSDRDTLERADSHLYEAKNSGRN
                     CVRPSV"
     gene            7962..9131
                     /locus_tag="RPW04_000916"
     CDS             7962..9131
                     /locus_tag="RPW04_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDX6295013.1"
                     /translation="MRLNDFLSTKPMYYDQIDYTRFPRAYACIKHRLSLPKVVHVVGT
                     NGKGSTGRFLAQILKSSGKKVGHYTSPHIFKFNERFWIDGKDVSDDELEKAHKQLLIY
                     FDEYQKTTKFGENFIETLSYFEWATLLGAVLFRDLDEVVLEAGMGGEFDATNVFPKKL
                     SIFTPVALDHAHMLGDSLEDIATTKLNSMDKFAVICSDFSLMDLAKNIAKKRGCNILI
                     APKEISSETTRYAFKFKLPSFLVDNLNLAVFSAKELGIKNIDEIVSHLDKLSLRGRLE
                     KVAKNITIDVGHNAHAAKEIAKNFTNKVYLIYNAFDDKDIKAVLNELKHIVSKILIYE
                     YDSDNRKLAGEKILKIAKDFGIPCDKFSNLEDDKDYLVFGSFVLVENFLKDTVEK"
     gene            9121..10011
                     /locus_tag="RPW04_000917"
     CDS             9121..10011
                     /locus_tag="RPW04_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDX6295014.1"
                     /translation="MKNKFLITITDINGSKNYLLHQLIKKIVIYVVIFTFCSFILGVF
                     YITYLENKTSALKDKRDELLKVKNELFIENEKMQKKIKASSEEFASIEDKIAALEEQL
                     GLNTDNNTTIDERLENIELTGFQQQIIFSMIPNGDVIKHNGVSATFGWRTHPILHRKQ
                     FHPGVDLRAPVGTPIYAPADGVVEFAGYNATNGFGYVVIIEHNFGFKSRFAHMSRKDV
                     VKEGEFIKKGTLIGYSGNTGLSTGPHLHYEIRFIQRPLDPINFIKWNSKNYEEIFKKE
                     QRVSWQSLVRTLADLTPKQQ"
     gene            9960..10373
                     /locus_tag="RPW04_000918"
     CDS             9960..10373
                     /locus_tag="RPW04_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HDX6295015.1"
                     /translation="MAVFSKNPSRFNAQTTIISEGAYIQGELTLKSMLYVDGKVDGAI
                     RSDNTVVIGKNGNIKGVIFAQKVVINGIFEGNIDAEFVDILNGSFVSGDILAANLSIE
                     SGAKFNGKSSTKNVVKSLENLEIIDAEASSASKDL"
     gene            10354..13311
                     /gene="mfd"
                     /locus_tag="RPW04_000919"
     CDS             10354..13311
                     /gene="mfd"
                     /locus_tag="RPW04_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HDX6295016.1"
                     /translation="MQARIYEFFKFNKNIYDILVTNDDKEAREAYDSASYAGLTCFVL
                     PDFRAIQGDDLRAFNAELLEISKVLTEFYKSDSKNKLLISPIRTLLNKLPTSSNLKTK
                     TISYADTLNLTEFKEEMLGFGYNFVDIVEGRGEIRISGEIIDIFSVSEDKPIRILLDI
                     DTVCSIRYFDLDTQKSDKNELTSVIITPFLASLNSDELKDVNDKLENIDSNALIKDIN
                     SFGFWVIDGFSDYFESFKTVLAMQIDIDDIVSNRDLSFLKAAPILPEPKIYKDLEVSV
                     NSDLIKFHGSKKIQILSSNESSFNALNLENSSNVELVISNLILNIASKDELILSLNKR
                     VKKQRVKKASLVIDELKIGDFVVHSDYGIGKFLGLELITVLGSKKEFVVIAYQNNDKL
                     LLPVEHLNMIDRYIAGSGAVVSVDRLGKASFAKIKEKVREKLFVIANKIIALAAKREL
                     IEGIRLNADSQYAKFKSSAGFIYTDDQEKAVNDIQNHLKSGRVMDMLLSGDVGFGKTE
                     VAMNAIFLCVKSGYQALFFVPTTLLSSQHFKSLKERFDKFNIDVRRLDRFTSTKEKSN
                     IIKNLNDAKPMVVIGTHSLLSLKAANLGLIIIDEEHKFGVKQKEKLKEISEHSHILSM
                     SATPIPRSLNMALSKVKSYSTLLTPPLDRMDVRTFVKEWDEKLIKEVILREIRRGGQI
                     FYVHNLISDMPSMERELKALIPNLKVLTLHSKIDAKTTEDEMMKFANKEYDLLLCTSI
                     IESGIHLPNANTIIIDDANKFGIADLHQLRGRVGRSNKQGYCYFLVGDKNELSSEAVK
                     RLIALESNSFLGSGALLAYHDLEIRGGGNLLGEAQSGHIEAIGYTLYLKMLEDEINLL
                     LNHQTKEMTQIDIKLSVNAFLNTDLINEDRIRLELYRRLSKCQNVSEVYELGAEIEDR
                     FGKLDAYTKQFLDIIVIKILACEQGFKSVSNYEQNISLTKIDDTKVILKSRSKDDDDV
                     LAQTLAYLRKNSS"
     gene            13308..13913
                     /locus_tag="RPW04_000920"
     CDS             13308..13913
                     /locus_tag="RPW04_000920"
                     /inference="COORDINATES: protein motif:HMM:NF023540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295017.1"
                     /translation="MTIGNSLSTISPYGDYGIKNSDSKEDTLKTSQNSEDKNNNSKKD
                     EKNVTQLSDKEKLQVAKLQKRDAEVRTHEAAHMVAGAGLTSGTNYTYQRGPDSKMYAI
                     GGEVGIDTSPGSTPEETIQKAQQIKRAALAPSSPSPADLKIAANAASMEVSAKAQMQQ
                     EQQDDSKGEDNNSALPNSTNKNNTKNPYKQDTYIPSTIGLF"
     gene            13935..14681
                     /locus_tag="RPW04_000921"
     CDS             13935..14681
                     /locus_tag="RPW04_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF815 domain-containing protein"
                     /protein_id="HDX6295018.1"
                     /translation="MKIDWKKTKAATLRDGKLKPIKDILISDLDELVSIDRQKDELIR
                     NTLNFINDKGANHALLWGEMGCGKSSLVRAVFCKFIDRNLRLIEISKFELVNLYKVLD
                     KIRDKKRFKFIIFCDDFSFEASDKTLGELKKLLEGSIQAPPKNAIFYATSNRKHIVKS
                     EKNHENYIIEKEHNRESLSLADRFGLHISFYEMEVSEYLDVVDSYFKDLDVDKEWLRK
                     EALIYASSKGVRSARSAKQFWLSVRSEFEK"
     gene            14671..15336
                     /locus_tag="RPW04_000922"
     CDS             14671..15336
                     /locus_tag="RPW04_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005872264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDX6295019.1"
                     /translation="MRSEDLFLALDKEVAFDFKANPFWWPEFGTFWVVIGAILTQNTK
                     WENVEKSFVNLKNADVQSLEDVANLSESGLANLIKPSGFYNTKAKRLSMLCKNILDKF
                     GSFEEFAKNASRKWLISQKGLGFESVDSILCYACSRDIMVVDKYTLRIFEFLDFTFES
                     YDEARQWLEDIDRNAVYKAICLVSDNELFARYHGLIVEFCKAHFKSGKFDDKATLLLR
                     SID"
     gene            15392..15793
                     /locus_tag="RPW04_000923"
     CDS             15392..15793
                     /locus_tag="RPW04_000923"
                     /inference="COORDINATES: protein motif:HMM:NF033674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NirD/YgiW/YdeI family stress tolerance protein"
                     /protein_id="HDX6295020.1"
                     /translation="MKKILISLAVVVAAFANSNNTNGGFSDTQINKPANQYRGGYTGG
                     AYGVTTVSAALSARDDTLVNLTGKITRQVQHDKYEFTDGKDTIIVEIDDDDWRGLVVG
                     PNDTVSIYGKVDSDMFKKNEIDVKTITKVNQ"
     gene            15944..16342
                     /locus_tag="RPW04_000924"
     CDS             15944..16342
                     /locus_tag="RPW04_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002951268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HDX6295021.1"
                     /translation="MQRILNSMKNIAVIGFSPEPAKASNMVGHYLIKQGFNVYPVYPK
                     EGEIYGRKIYKSLRDINDPIDTVVMFRKSEFASSLLDEAYDIGVKNLWLQLGIENDEV
                     MAKAEILGINFIQNACIMVEHKKENNGKLK"
     gene            16326..17537
                     /locus_tag="RPW04_000925"
     CDS             16326..17537
                     /locus_tag="RPW04_000925"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002780366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HDX6295022.1"
                     /translation="MVSLNKIIQAKRTVDGFISKTPFALAPRLSKISGADIYLKKENL
                     QITGAYKVRGAFNKIANLSDDSKKCGVVAASAGNHAQGVAISARHFGVRAVIIMPEAA
                     PLSKVSGTKSLGAEVILSGDNFDEAYEFALKYAKDNSMTFVHPFDDELVQAGQGTIAL
                     EMLDEVADLDYIVAPVGGGGLISGVASCAKQINPNIKIIGVSAKGAPAMFDSFKDKKQ
                     HNSKSVRTIADGIAVRDASPITLANIIESVDEMVQVGDDEIANAILYLLEQQKIVVEG
                     AGAVSVAALLENKFKFKKGAKIGAILSGGNIDVQMLNVIIEKGLIRSCRKMIINVTLI
                     DKPGALMGLTDVLRSSGANIVKIDYDRFSTKLSYGDASITITLETKGKEHQEKVAYAL
                     KSAGYEFTQEF"
BASE COUNT         6452 a         2356 c         3530 g         5370 t
ORIGIN      
        1 ataccaaaat ccatagtaaa aaaggctaaa acttatccaa taaaaccaaa acatgccgat
       61 aaaaaatccg ctccaaaacc atacttgttt agttgatttt aatataaaat agagtccgat
      121 aacggctgaa atcattccta tgtatataaa aattttaagt tctaaaagag atagaaatat
      181 aaaatttgat attaaaattg ctatttcaaa gccatttctt ataaaattta aggtaaaata
      241 tgtacttaaa tttttactaa aggacaccca tgccagagat tgtatcttca ttattacctc
      301 taattgtatt atttgcaatt ttttattttt tggttataag accgcagcaa aagcagcaaa
      361 aagagcatag aaatatgcta tcaaatcttc aaaaaggcga taagatcgtt acaaatggag
      421 gcttgttttg cgaggtcgta aaacctgagg atgattttat caaagttaag cttaatgatg
      481 aggtaatcgt aagaatcgat cgcaacttcg tagctaaaaa aatagacaaa atcgagaaaa
      541 gcgatgctta aaggtagagt aacttataga ctagttattt ttatcttagc tcttatattt
      601 gggcttggct tttcgatgcc aagcttttta cagagcgaaa agggatataa aataagctta
      661 ggtcttgact tgcaaggcgg cttacatatg ctacttggcg tacaaacaga tgaagccatt
      721 acttcaaaaa taaaatcaat cgcttctagt atcagatatt ttacaaataa aaacgatatc
      781 ttagtagaaa atttaaaaac cgataccgat actgttcatt taactatctt agatagcgat
      841 gaagctaaaa aaatagatga aatgctaaaa ggtattaaag gcttagatat taaaaaagat
      901 ggtttaaatt atagaatttc tttaacagcg gctgaaaaga tagatacggc taaatatgca
      961 gtagatcaag ctgttgaaac cataagaaat agattagatc aattcggtct tgccgagcct
     1021 accgtagcaa aacaaggtga aaatcagatc ttagtcgagc ttcccggtat aaaaactgcc
     1081 gccgatgaac aaagagctaa agatcttata gctaaatcag cacatcttca gcttatggct
     1141 cttgatgaaa agaggcaaga tcaagcaaat aaaatgactg aagccgaagc gactgcttat
     1201 ggagatgtac tttaccccga tgtaaaaaat cctaaattta aatatctcat aaaagatatt
     1261 cctgtgcttg atggaaatat gttagttgat gcaagagttg catttgataa tcagacgaat
     1321 tctcccatca taagttttac tttaaatgct gaaggtgcta gaatattcgg tgattttaca
     1381 ggatcaaatg ttggaaaacg tcttgctata gtgcttgatg gtaaggtata ttcagctccg
     1441 gttataaatg aaagaattgg tggtggaagc ggtcagataa gtggaggatt tagcgtagaa
     1501 gaggctcacg atgttgccat agctcttaga agcggtgcac ttttagctcc tgttaatatg
     1561 ctagaaaaaa gaagtatagg acctagttta ggacaacaaa gcatagatca aagtatggta
     1621 gcgctagctg gcggagctat tttggttgtt ttatttatgg tgcttattta tggacttgcc
     1681 ggagttttgg caaatatagc tttagtagta aacatattac ttttagtggc cgtgatggct
     1741 ctttttggag ctactttgac tttgccgggt atggctggaa ttttgcttac tataggtatg
     1801 gcagtagatg ctaatgttat cataaatgaa cggatacgag aacttttaaa agccggtcag
     1861 agcgttcacg ttagtataga gaaaggttat aaaaacgcta tgagcgcgat aatcgattca
     1921 aatttaacca cgctcataac ttcagctgct ttatatgctt atggaacagg tccagttaaa
     1981 ggatttgccg ttactatgag tataggtatt ttggcatcta tgttaactgc tatattagga
     2041 actcatggta tgtttgagtt tttaggtaaa aagatagaaa ataataaaaa cagcgtgctg
     2101 tggtttggat ataagataag aaaggtagct taatgcagat atttgataat ggtagaattt
     2161 atgattttat gggcaagaga tggctatttt tttgcttttc ttttatacta ttttttggtt
     2221 ctatcgtact tatttgtact aaaggattaa actatggaat tgatttttcc ggcggtactc
     2281 ttatacaagt aaaatacgaa ggaaaagcac ctcttgatga tataagagat aagcttgccg
     2341 caaatgaagt ccttaaaaat gcgaatgtaa cagagtttgg ttcagatgaa gagatcacga
     2401 ttagatactc aggaagtagc gatagcttag gaagtgatcc aggagccgta gtaacaagta
     2461 tccttgaagg caccggcaaa tttgagataa gaagagtaga tgtcgtaggt ccaaaagtag
     2521 gtagtgagct tagacaaaaa ggtttaatgg cgataggcgt ttctcttatt ttaatactta
     2581 tttatattgg ggtgagattt gagtggagat ttgctttggc tgctattatc agtgaaattc
     2641 atgacgtggt aataacgata ggagctataa gcttacttag tatagacgta aatttagaca
     2701 cgttagctgc cgtattaaca gtacttggat actcgctaaa tgatactatt attatatttg
     2761 atagaattag agaaagagta aaagagagta aatttataaa actaaacgat gttataaatg
     2821 agtctgtttc gctaactttg tcaagaacta ttatgacttc gattactaca ttattagcgg
     2881 ttttagtgct atttttcttt ggtggagata tgataaatgg attttctatt attatgctta
     2941 taggtatcat cataggtact attagttcgg tatttatagc ttctcctatg cttggctggt
     3001 ttaaatttag cgttgatcat tatagatctc atcttgcagc taaagaggtt aagagaaaag
     3061 aaaaagagag aattcgtgct atgtatgaaa aaggaactat ttaaggagct agtatgaatt
     3121 ggggtaaggt tatatacacg ttttttgctc ttatgagctt gaccacgact gccggatttt
     3181 tatatgataa gagtgagatt acgttattta tagcagctag tataaatttg atttctactt
     3241 tacttaaaat aggagttaga aatatgctct ctgccgagct atttgctagc tcccttgtgg
     3301 ctgatttgca tttaattccg gcttttgttc ttttagttat aggagctaat gaagttatag
     3361 tatattcttt agttatcggc ggagtaatag caaatatatt ttctatgttt ttacttctaa
     3421 ctgaagctag caaaataaga gatgaatttt aaggaatatt atggaatata atgctaaaaa
     3481 tattgaatac aaatggcaac aaatttggaa aaaaaatggt tatagtgagc caaaagacga
     3541 ctattcactg cctaaaaaat atattctttc tatgtttccc tatcctagcg gtaggcttca
     3601 tatgggtcat gttagaaact atagtatagg agacgctctt tctcggtact acagaaatag
     3661 aggctataat gttttacaac caataggatt tgatagtttt ggtatgccgg cggaaaatgc
     3721 agctataaag cataaaattc accctaaaat ttggacttat gataatatag attatatgac
     3781 aaaagagctt gacgctctag gttttagttt ttctaaaaag agactttttg ctactagtga
     3841 tcctctatat actagatggg agcaggaatt ttttattaga atgtatgaaa aagggcttgt
     3901 atatagaaaa tcagctgtcg taaattggtg tgaaaatgat caaactgttt tagctaatga
     3961 acaagtagaa gatggaaaat gctggagatg cgggcatgaa gttatacaaa aagagatgcc
     4021 ggggtattat ctaaaaatta cagactatgc aaatgagcta ttagagtgtt taaaagattt
     4081 agagggtaaa tggccaaatc aagttttaac tatgcaagaa aactggatag gtaaaagtta
     4141 tggacttgag tttgagttta aattcgatag cagtagtaaa attttgcttg atggtatgga
     4201 tggatttaaa gtatttacaa ctcgtcctga taccatatat ggagttagtt acgccgctat
     4261 agctcctgaa catatagttg taaaaaagtt gcttgaaaaa aacatacttg atgacgccac
     4321 atctgctaag ttaaaattta tattaaatca aagtccaaag cagagacaat ctatcgataa
     4381 agacggtgtt agtttaggat taaacgtaat tcatccgcta actaacgaac ttatacctgt
     4441 ttggtgtgca aattttgtac ttgctgaata tggcggcgga gccgttatgt ctgtgcctgc
     4501 tcatgatgag agggattttg agtttgctag caaatttaat ctaaatatca agcaaattat
     4561 aaaatcagat actcttccat actgcgaaaa aagtggagtt tatataaact cagaacttat
     4621 aaacggactt gcgtatgagg aagctagaga gaagataatc tctaaatttg aaaaagaggg
     4681 ctggggaaat agagttacaa attataagct tcgtgactgg ggaatttctc gtcaaagata
     4741 ctggggagcc cctataccga tgatacactg taaaaaatgc ggcgtagtac ctgaaaatat
     4801 atcaaatctt cctgttaaat tgcctgatga tgtagtcata actggagagg gaaatcctct
     4861 tgataagcat agcgagttta aaaactgtaa atgtccaaaa tgcggtagtc aagctacaag
     4921 agaaacggat actatggata cgttttttga aagttcatgg tattttgcaa ggtttgcaag
     4981 tgatgaaaaa acatgggaag atgtagcttt tgataaaaaa agcgtcgatt actggatgag
     5041 cgttgatcag tatatcggag gaattgagca tgctatattg catcttttat atgctagatt
     5101 ttttcaaaaa gctttgagag atcttgggta tttaagggat tgcgaaccgt ttgacagtct
     5161 tttaactcaa ggaatggtgc taaaagacgg ttctaaaatg agcaaaagca aaggaaatac
     5221 cgtagatcca gatgatatta taaataaatt tggagccgat acggcaaggc tatttatact
     5281 ttttgcagca cctcctcaaa aagagcttga gtggaatgat agcgcagtag aaggagcatt
     5341 taaatttata aatagacttt atgatagaag cgataatgct tataaaactg aaattttacc
     5401 gcaaatcaac cattcaaatt taaataaaga cgaaaaatat gctagattaa aagtttatga
     5461 agctctcaaa aaatcaaccg atgtttttga aaatagcttt gcttttaaca cgcttatagc
     5521 agcttgtatg gaggctttaa acggtttgaa cgctcaaaat aataaagata tatggaccga
     5581 gggttacttt attattttaa atttacttga gcctattatt cctcatgctt gccatgagct
     5641 tagtaatgag ctgtttggtc ttaaaaattt cacgaaatta agtttaaaag atgaagtttt
     5701 tgtaaaagat agcttaaatt tagccataac agtaaatggc aaacgtcgct cggaaataga
     5761 agtgtctgcc tttgaaagcg atgataaaat tttagagata gctaaacaag aggtttctaa
     5821 atggatagaa ggtaaagaga tattaaaaga aatatatgtg cctaataagc ttgtaaattt
     5881 agttataaag ggctagaatg aagacgcttt taaatttgat agtcgttctg ttttttctag
     5941 gatgtggtta taaaccagtt tctgttataa ctgcaaatgt tttagatgag tcggtttggg
     6001 tagacgtgat aatgagtaaa acagatcctg aaaatacggt tgctatcaaa gacagcgtaa
     6061 gagaagctat gataaaaagg ctaggtagaa atttaactac aaaagaagaa gccaatagca
     6121 ttattatagc cagtataaaa tcacttactt ttaatgctat tttatatgat caatttggtt
     6181 atgttactgc ttataaaaca aatttgattg ttgattataa agtgaaatta aaaaacggag
     6241 atatcaaata cataactaca agcggagact atgattttag gattacaaaa cgtataaata
     6301 atactagatt tacagatagc gttataagtg acaaggatag atttgaggcg atcaaaaatg
     6361 catctttaca gtcgtttgac gagtttattt ctaggttagc tattgaaggt ttaagagatg
     6421 gcaagtatag taagtgaagt tataaaagat gttattttag aggcaaattc aaaaaagata
     6481 gttctaactc cggacaatta tcatatgctt ttttgtgaag cagctagaag aagaggcgta
     6541 tcggtagaag actgcaaaaa actagaaaaa tatatttcaa agcttgataa aatgtatcaa
     6601 gatgagctaa aaaagatgaa tgtgagaaat ttagacgagc tttttgcatt tattagttca
     6661 cgattaaatc gtataaatcc aagcgatttt actaaactta ctcaagcttt tactctgctt
     6721 acaaagcgta ttttacagag tataagctta cttcataaca agcaagcaag aaacctggca
     6781 aatataagcg tacagactat tgataaaaaa attagcatag aaaatatcaa tattataaaa
     6841 gataagtggt ttaacttttt aagcgactat aatgatgatt atctaaaaaa actagaacag
     6901 tacggtataa aaaatagcga tgacttagaa ggtattgtaa gcaaactttt aaatgctaaa
     6961 tttactccaa gcagtgaaga taaggattac acaaaacttg ccgagcttat gatagctgct
     7021 ttagtaccgt cgatagcttc tagtatgaac gatgaattag cagctataag cgatgagata
     7081 agagccaaac cggagctttt gcaaagcgat ggaatgcaaa acgatattaa aaaatttatt
     7141 ttgaaaagag ttgatttaga taaaagcgaa gtaaagcaaa agatcgttat tttagataga
     7201 attttagatg atatcaatga gcaaataaag tattttatat caagagttgc tcaaaatgaa
     7261 aacggtataa gcagtataaa aacggattta gataatataa ggtctaatga tgattatatt
     7321 gttgttaaag agaagctttt gcatgtatct aattcgcttg agtttgagat aaaagatttt
     7381 ttagctaaac ttatagagga taaaaaaact atttctaacc taaaagctag agtaaaagag
     7441 ttagaagata tgcttttgca agcaaaagaa gagataagca gcgattatct tacaaacgta
     7501 ggaacaaaaa gagcttttga aatcgaattg gctaatatag aagatgtata taaaagatat
     7561 aaaatagact actctatatg ctttttcgac atagatcatt ttaagatagt aaatgataat
     7621 tatggtcatg aagcaggtga tactatctta tctactgtcg gcaaaatact aaaaaaacag
     7681 tcaagagata ttgattttgt aggtagatac ggaggagaag agtttgttgt tattatgcca
     7741 gaaacatcaa aagacaatgc gattttgttt gcaaaaaata tcttatcaaa tatatcgaat
     7801 tttaaatttt tatatagagg tgaagatata gacataacaa ttagttgcgg agtggcttca
     7861 agaaaagata gtaaaagcga cagagatact cttgaaagag cagattctca tctatatgaa
     7921 gctaaaaata gtggtagaaa ttgcgtaagg ccaagtgttt aatgagacta aacgattttt
     7981 taagtacaaa accgatgtat tatgatcaga ttgattatac tagatttcct agagcttatg
     8041 cttgtataaa acatagatta agcttgccaa aagtagtgca tgtagtaggc acaaatggta
     8101 aaggaagtac cggaagattt ttagcgcaaa ttttaaaatc aagcggtaaa aaagttggtc
     8161 attacacaag tcctcatata tttaaattta atgaaagatt ttggatagat ggcaaagacg
     8221 ttagtgacga tgagcttgaa aaagcgcaca aacaacttct tatatatttt gatgaatatc
     8281 aaaaaactac taaattcggt gaaaatttta tagaaacttt aagctatttt gaatgggcaa
     8341 ctctgttagg ggctgtttta tttcgcgatc ttgatgaagt tgtgcttgaa gctggaatgg
     8401 gtggagagtt tgatgctaca aatgtttttc ctaaaaaact tagtatattt accccagttg
     8461 cgcttgatca cgcccatatg cttggagata gcttagaaga tattgctaca acaaagctaa
     8521 attctatgga taagttcgct gttatttgca gtgatttttc tctcatggat cttgcaaaga
     8581 atatcgcaaa gaaacgcggt tgcaatattt tgattgctcc aaaagagatt agcagtgaga
     8641 ctactcggta cgcttttaaa tttaaattac ctagtttttt agtagacaat cttaatttag
     8701 ccgtatttag cgcaaaagag cttggaataa aaaatataga tgaaatagtt tctcatttag
     8761 ataaattgag ccttagagga cgtttagaga aagtagcaaa aaacataacg atagatgttg
     8821 gacataatgc tcacgcagca aaagagatag caaaaaactt tactaataaa gtatacctta
     8881 tatataatgc atttgatgat aaagatataa aagctgtttt aaatgagtta aagcatattg
     8941 tttctaaaat tttaatatac gaatatgaca gtgataatag aaaattggca ggtgaaaaaa
     9001 tattaaaaat cgcaaaagat tttggtatac catgcgataa attttcaaat ttagaagacg
     9061 ataaagacta ccttgtattt ggctcatttg tgcttgtaga aaacttttta aaggatacag
     9121 ttgaaaaata aatttttaat tactatcaca gatataaacg gctcaaaaaa ctatctttta
     9181 catcaattaa tcaagaaaat cgttatttac gttgttattt ttacattttg tagttttatt
     9241 ttgggggtat tttatatcac ttatcttgaa aataaaacta gtgcattaaa agataaaagg
     9301 gatgagcttt taaaggtaaa aaatgagtta tttatagaaa atgaaaagat gcaaaaaaag
     9361 ataaaagcta gcagtgaaga gtttgcttct atagaagata agatagcggc tcttgaagag
     9421 cagttaggtc ttaataccga taataacaca acgatagatg agagattaga aaatatagag
     9481 cttactggat ttcaacaaca gattattttt tctatgatac caaacggaga tgtcataaaa
     9541 cataatggtg tgagtgctac gtttggttgg agaactcatc ctatactaca tagaaagcag
     9601 tttcatccag gagttgatct aagagctcct gtgggtacgc ctatatatgc tccggccgac
     9661 ggtgttgttg agtttgccgg atataatgct acaaatggat ttggttatgt tgttataata
     9721 gaacacaatt ttggttttaa aagtcgcttt gcccatatga gcagaaaaga cgtagtaaaa
     9781 gaaggagagt ttataaaaaa aggaactctt ataggatata gcggaaacac tggacttagc
     9841 accggacctc atttacatta tgagattaga tttatccaac gtcctttaga tcctataaat
     9901 tttataaaat ggaatagtaa aaattatgaa gaaatcttta agaaggagca aagagtatca
     9961 tggcagtctt tagtaagaac cctagcagat ttaacgccca aacaacaata atttcagaag
    10021 gtgcttatat acaaggtgag cttaccttaa aatctatgtt gtatgtagat ggtaaagttg
    10081 atggagctat aagaagcgat aatacagtag ttataggtaa aaacggtaat atcaaaggtg
    10141 tgatttttgc acaaaaagtt gttattaacg gtatttttga aggtaatata gatgctgaat
    10201 tcgtagatat tttaaatggt agctttgtat caggagatat attagcggca aatttaagca
    10261 tagaaagcgg tgctaaattc aacggaaaaa gcagtacgaa aaatgtagtt aaaagtttag
    10321 aaaatttaga gattatagat gctgaggcta gtagtgcaag caaggattta tgagtttttt
    10381 aaatttaata aaaatatata cgatatctta gtaacaaatg acgataaaga ggcaagagaa
    10441 gcttatgata gtgcttctta cgccggactc acttgttttg ttttaccgga ttttagagct
    10501 atacaaggtg atgatttaag agcttttaat gcagaacttt tagaaataag taaagttcta
    10561 actgaatttt ataaaagtga ttcaaaaaat aagctgctta tatctcctat tcgtacgctt
    10621 ttaaataaac ttccaactag ctcaaattta aaaaccaaaa ctataagtta cgcagatacg
    10681 ttaaatctaa ctgagtttaa agaagaaatg ctcggtttcg gatataattt cgtagatatc
    10741 gtagaaggca gaggcgaaat aagaataagc ggcgaaatta tcgatatatt tagcgtctca
    10801 gaagataagc caattagaat tttgctggat atagatactg tttgtagtat aagatacttt
    10861 gatcttgata ctcaaaaatc agacaaaaac gagcttactt cagttattat aactccgttt
    10921 ttggcttcat taaatagtga tgaattaaaa gatgtaaatg ataaattaga aaatatcgat
    10981 tcaaatgctt tgataaaaga tatcaactca tttggttttt gggttataga cggatttagc
    11041 gattattttg agagttttaa aactgttttg gcaatgcaaa tagacataga tgatatcgtt
    11101 tctaatagag atctaagttt tttaaaagct gctcctattt taccagaacc aaaaatttat
    11161 aaagatttag aagttagtgt aaatagtgat cttatcaaat ttcacggcag taaaaaaatt
    11221 caaattttga gctcaaacga gagtagtttt aatgctttaa atttagaaaa tagttcaaac
    11281 gtagagcttg tcataagcaa tctgatatta aatatagcta gtaaagacga attgatacta
    11341 tctttaaata aaagagtcaa aaaacaaaga gttaaaaaag caagtttagt tatagatgaa
    11401 ttgaaaatcg gtgattttgt cgtacatagt gattatggta taggtaaatt tttaggactt
    11461 gagcttatca cggttttagg tagtaaaaaa gagtttgtag ttatcgctta tcaaaataac
    11521 gataaacttc ttttgccggt tgaacatcta aatatgatag atcgttatat agcaggaagc
    11581 ggcgccgtag ttagcgtaga taggctcggc aaggctagtt tcgcgaaaat caaagaaaaa
    11641 gttagagaaa agctatttgt tatagctaat aaaatcatag ctctagctgc aaaaagagag
    11701 ttgatagaag gtataagatt aaacgcggat agtcagtatg ctaagtttaa atccagcgcc
    11761 ggatttatat acacggatga ccaagaaaaa gcagtaaatg atatacaaaa tcatctaaag
    11821 agcggacgag ttatggatat gcttttaagc ggcgatgtag gttttggtaa aaccgaagtt
    11881 gctatgaacg ccatattttt atgcgtaaaa agcggctatc aggctctatt ttttgtacca
    11941 actactttgc ttagctctca gcatttcaaa agtttaaaag agcgttttga taaatttaac
    12001 atagatgtac gcagactaga tagatttact agcacaaaag aaaaatcaaa tattataaaa
    12061 aatttaaatg atgcaaaacc gatggttgtc atcggcactc attctctttt atctttaaaa
    12121 gcggcgaatt tgggacttat aattatagac gaagagcata aattcggtgt taaacaaaaa
    12181 gaaaaactaa aagagataag cgaacactct catatacttt ctatgtcggc tactcctatt
    12241 ccaagaagtt taaatatggc tttaagtaaa gttaaaagtt atagcactct tttaacgccg
    12301 ccgcttgata gaatggatgt aagaacattt gtcaaagagt gggatgagaa gcttataaaa
    12361 gaggttatat taagagagat tagaagagga ggtcagatat tttacgtgca taatttaata
    12421 tctgatatgc caagtatgga gcgagaatta aaagctttga taccgaattt aaaagtttta
    12481 acgcttcata gtaagataga cgcaaaaact accgaagatg agatgatgaa atttgcaaat
    12541 aaagagtatg atctgcttct ttgcacaagt atcatagaaa gcggtattca tttgccaaat
    12601 gctaatacta ttataatcga tgacgcaaat aaatttggga ttgcggattt gcatcagtta
    12661 agaggaagag tcggtaggag caataaacaa ggctattgct actttttggt cggcgataaa
    12721 aatgagctta gtagtgaagc cgtaaaaagg cttattgctc ttgaaagtaa ttcgtttttg
    12781 ggctccggag cacttcttgc ttatcatgat ttagaaatta gaggtggcgg gaatttgctc
    12841 ggagaggctc aaagcggtca tatagaagct atcggatata cgctttatct aaaaatgctt
    12901 gaagatgaga taaacttgct tttaaatcat caaacaaaag agatgactca aatagatata
    12961 aaacttagcg taaatgcatt tttaaatact gatctcataa atgaagatag aatcaggctt
    13021 gaactataca gacgtcttag caaatgccaa aatgtaagtg aagtttatga gctaggagca
    13081 gaaattgaag atagatttgg caaacttgat gcttacacta agcaattttt agatattata
    13141 gtcataaaga ttttggcctg cgaacaaggg tttaaatctg tgagtaatta tgaacaaaat
    13201 ataagcttaa ctaaaattga cgatacgaag gttattttaa agtcaaggag taaagatgat
    13261 gatgacgtac ttgcacaaac tctggcatat ttaagaaaga attcatcatg actataggga
    13321 attctctttc tactatcagc ccatatggcg attacggtat taaaaatagc gatagtaaag
    13381 aagatactct aaaaactagt caaaatagtg aagataaaaa taacaatagc aaaaaagatg
    13441 aaaaaaacgt aactcagcta agtgataaag agaagcttca agtagctaag ttgcaaaaaa
    13501 gagatgcaga agtaagaact cacgaagcag cccatatggt agcaggtgcc ggactaacta
    13561 gcgggactaa ctatacttat caaagaggtc ctgactcgaa aatgtatgct ataggcggtg
    13621 aagttgggat agatactagt cctggcagta ctccagaaga aactatccaa aaagctcagc
    13681 agataaaacg tgccgctcta gctccatcga gtcctagtcc agcagatctc aagatagcgg
    13741 caaatgcggc tagcatggaa gtttcagcaa aagctcagat gcaacaagaa caacaagatg
    13801 atagtaaggg cgaagataat aactccgcct tacccaactc aactaataaa aataacacca
    13861 aaaatccata taaacaagat acatatatcc caagtactat cgggctgttt taaatttaaa
    13921 gcaaaggaga tattttgaag atagactgga aaaagaccaa agccgccact ttaagagacg
    13981 gaaaattaaa acctataaaa gatatattga tcagtgattt agacgagctt gtaagcatag
    14041 atagacaaaa agacgagctg atcagaaata ccttaaattt tataaacgat aaaggtgcta
    14101 accacgctct tttatggggt gaaatgggtt gcggaaaatc aagccttgtt agggctgtat
    14161 tttgtaaatt tatagataga aatttaaggt tgatagagat aagcaagttt gaactcgtaa
    14221 atttatataa ggttttagat aagataagag ataaaaaacg ttttaaattt ataatatttt
    14281 gcgatgattt tagctttgaa gctagcgata aaactctagg cgagcttaaa aaattgcttg
    14341 aaggaagcat tcaagctcca ccaaaaaatg cgatttttta tgctacaagc aacagaaaac
    14401 acattgtaaa aagcgaaaaa aatcacgaaa attatataat agaaaaagag cataatagag
    14461 aaagcttaag cttagcagat agatttggtc tgcatataag cttttatgag atggaggtat
    14521 ctgagtatct tgacgtagtt gatagctatt ttaaggatct agatgtagat aaagagtggt
    14581 taagaaaaga agctcttatt tacgcttcat caaaaggtgt aagaagcgct agaagtgcaa
    14641 agcagttttg gttgtctgtt aggagtgagt ttgagaagtg aagatctgtt tttagctcta
    14701 gataaagaag tagcatttga cttcaaggca aacccatttt ggtggccaga gtttggtacg
    14761 ttttgggtcg tcatcggagc tattttaact caaaatacga aatgggaaaa tgtagagaaa
    14821 tcttttgtaa atttaaaaaa tgcagacgtg caaagccttg aagatgtggc aaatttaagc
    14881 gagtcaggct tagcgaattt aataaagcca agcggatttt ataatacgaa agccaaaaga
    14941 ctaagtatgc tttgtaaaaa tattttggat aaattcggct catttgaaga gtttgcaaaa
    15001 aatgccagca gaaagtggct gatctctcaa aaaggtttgg gttttgagag cgttgatagt
    15061 atactttgtt atgcttgttc gcgtgacatc atggtggtgg ataaatacac gcttaggata
    15121 tttgagtttt tggattttac ttttgagagt tacgatgaag ctagacagtg gctagaagat
    15181 atcgatagaa acgctgttta taaagcaata tgcctagtaa gcgacaatga gctttttgct
    15241 cgttatcacg ggcttatagt cgagttttgt aaagctcatt ttaaaagtgg aaaatttgat
    15301 gataaggcga ctttgctttt aagaagtatc gattaacatt cttttaacaa agttttatta
    15361 ttatttcata aattaagtaa aaggaattaa aatgaaaaaa atattaatat ctttagcagt
    15421 tgttgttgct gcttttgcaa atagcaacaa tactaacgga ggatttagcg atactcagat
    15481 caataaacct gcaaatcagt accgtggtgg ttatacagga ggcgcttatg gcgtaactac
    15541 ggtatcggct gctcttagtg ctagagatga tactttagtg aatttaacag gaaaaattac
    15601 aagacaagtt cagcacgata agtatgaatt tacagatgga aaagatacta tcatagttga
    15661 gatagacgat gatgactggc gtggattggt tgtaggtcct aatgatactg tttcgatcta
    15721 tggcaaagtc gatagtgata tgttcaaaaa aaatgaaata gatgtaaaaa ctattacaaa
    15781 agttaatcaa taatttgaaa tttagatata tataatttta aaaatagttt aagcttaaaa
    15841 ttatctgctt aaactatttt aaatgcttcc aaatgccgat atttttataa ttcttttacc
    15901 tttttttagc tacaattttt taaatttact tcaaaagaga tctatgcagc gcattctaaa
    15961 tagtatgaaa aatatagccg ttataggatt tagtccagaa cctgccaaag ccagcaatat
    16021 ggttggtcat tatcttataa agcagggttt taatgtatat ccggtgtatc caaaagaggg
    16081 cgaaatttat ggcagaaaaa tatacaaaag tttaagagat ataaacgatc ctatagacac
    16141 tgttgtaatg tttaggaaga gcgagtttgc ttctagtttg cttgatgaag cctatgatat
    16201 aggagtgaaa aatctctggc ttcagcttgg tattgaaaat gatgaagtta tggctaaagc
    16261 tgagattcta ggtataaatt tcattcaaaa tgcatgcatt atggtcgaac acaaaaagga
    16321 aaacaatggt aagcttaaat aaaataattc aagcaaaaag aacagttgac ggatttattt
    16381 ctaaaacccc atttgcttta gctcctcgtc ttagcaaaat aagcggagcc gatatttatc
    16441 taaaaaaaga aaatttacag ataacagggg cttacaaagt tagaggggca tttaataaaa
    16501 ttgctaattt aagtgatgac tccaaaaagt gcggagtagt agcggcgagt gccggaaatc
    16561 acgctcaagg agtagctatc agtgcaagac attttggcgt tagagcagtt ataattatgc
    16621 ctgaagcggc tccgctttca aaggtatctg gcacaaaatc tttgggtgct gaggtcattt
    16681 taagcggtga taactttgat gaagcttatg aatttgctct aaaatatgca aaagataact
    16741 ctatgacttt tgttcatcca ttcgatgatg aattggttca agcaggacaa ggaacgatcg
    16801 ctttagaaat gcttgatgaa gtggcggatt tagactatat agtagctcct gttggtggag
    16861 gtggactgat aagcggcgtg gcaagctgcg ctaaacagat aaatccaaat ataaaaatta
    16921 tcggcgtaag cgcaaaaggc gctcctgcta tgtttgatag ttttaaagat aaaaaacagc
    16981 ataattcaaa atcggttaga accatagccg atggtatcgc cgtacgtgat gctagtccta
    17041 taactttggc aaatatcatc gagagcgtcg atgagatggt tcaagtagga gatgatgaga
    17101 tagcaaacgc catactatat cttttggagc agcaaaagat agttgttgaa ggtgcaggag
    17161 ctgtatctgt tgcggctttg ctggaaaata agtttaaatt taaaaaaggt gctaaaatag
    17221 gagccatctt aagcggtgga aatatcgatg tacaaatgct aaacgttatc atcgaaaaag
    17281 gtcttataag aagctgtaga aaaatgatca taaacgttac tttgatcgat aaaccgggcg
    17341 cacttatggg acttacagat gttcttagaa gctccggagc aaatatcgta aaaatagact
    17401 acgatagatt ttcaacaaag ctaagttacg gtgacgcatc cataaccatc acgcttgaga
    17461 ctaaaggtaa ggaacatcaa gaaaaagtag cttacgcttt aaaatcagca ggatacgaat
    17521 ttactcaaga attctaatac taaaaattag cttggattat caaaaatcta agctaaaatg
    17581 tagatattta aacaactttt ataattacta actaaaaaaa attaaaatta ttctcagata
    17641 ttaggtagca atgtgtaaaa atgaaacaca ataataagaa tattgcagaa taaaatataa
    17701 attcatac
//
LOCUS       DAPPKW010000030        17445 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.030, whole genome shotgun sequence.
ACCESSION   DAPPKW010000030 DAPPKW010000000
VERSION     DAPPKW010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17445
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.030"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            139..1170
                     /locus_tag="RPW04_000926"
     CDS             139..1170
                     /locus_tag="RPW04_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDX6295023.1"
                     /translation="MKKIVFLRTDPSATGGAERYLTRLKNALKNSGINSEIRSFKGNK
                     KLSSWLKALKFNAQVKNEKNEDEIYFSLDRVTSADIYRAGDGVHKVYRSLKPFWFFNP
                     LNFVYVYLEKRCFLNSKSIITNSNLIKQQIIDTYGIDKDKITTIYNGINLPTKVEKGS
                     AKMRLCEKFGLNYELPILLFVGSGFKRKGVSEFLSIISKISLAINTIIVGSDKNIKKY
                     KNLAKKLGINAIFTGKQRVVNDFYEGADMFIFPTHYEPFSNVILEALSYGCVCITTRQ
                     NGASEILDKDFIMDQPKSFEIANFIEKILKDNKLLSKIQTSNLELSKKFSIEDNAKKT
                     MEIINAHTN"
     gene            1154..2098
                     /gene="waaF"
                     /locus_tag="RPW04_000927"
     CDS             1154..2098
                     /gene="waaF"
                     /locus_tag="RPW04_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009294715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HDX6295024.1"
                     /translation="MRILIELPTWLGDSVMASAAVQSLALNYPNCKITFFGSEISTSI
                     YSSYPNRENIIIDNSKKARFRLFYLLKTALNLDKFDIAISFRSHFYSKVFFKFIKADK
                     KAIFTPTKNEIHQVQKYINFIIDCINLKKSTDELKLYFTPFKFKNKTLGINPGASYGS
                     AKRWYPQYFANVAINLKESYEVVVFGGKNEQNICDEIALELKKNGVKYQNLCCKTTVC
                     ELASFIAGLDMFITNDSGPMHIAAAFKVPTIALFGPTKFKETSPYKNNNAKILHLDLD
                     CMPCMKRVCPLNSHECMKNLTPKMVLDAIYTLNLQPRK"
     gene            complement(2064..2624)
                     /gene="gmhA"
                     /locus_tag="RPW04_000928"
     CDS             complement(2064..2624)
                     /gene="gmhA"
                     /locus_tag="RPW04_000928"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDX6295025.1"
                     /translation="MSIFLNELEAHKETLNMVYELNENVLKACEMVVETLKNGGKVLI
                     CGNGGSAADSQHFAAELTGRYKTERTPLAGIALSTDTSALTAIGNDYGYDEVFARQTA
                     ALGRRGDILIGISTSGNSANVLKALKTARQNGLKTLGLSGKSGGAMNDLCDLNLIIPA
                     NDTARIQEMHILVIHTICGAVDLAYK"
     gene            complement(2634..3323)
                     /locus_tag="RPW04_000929"
     CDS             complement(2634..3323)
                     /locus_tag="RPW04_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013135378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HDX6295026.1"
                     /translation="MRVVGLIGGMSWESTLTYYKVLNEEIRDRLGGLHSAKCIVYSLD
                     FHEIEKFQSQNEWQKSGKVLLDAALNLEKAGAECVMICTNTMHKVADMITASLKIPFI
                     HIADVTAQALKQNGSKKALLLGTKYTMTESFYKDKISKNSIEVVVPNKSDTDFINSVI
                     FNELCIGNIKQSSKIEFIKIINESKKLGVDSVILGCTEIGLLIKDDDCDIKIFDTTLL
                     HAKAAADFSIN"
     gene            complement(3329..4705)
                     /gene="rfaE1"
                     /locus_tag="RPW04_000930"
     CDS             complement(3329..4705)
                     /gene="rfaE1"
                     /locus_tag="RPW04_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HDX6295027.1"
                     /translation="MVNVLVVGDLMIDHYVWGSCDRISPEAPVQVVNIKNETKRLGGL
                     GNVVSNLKTLGSEVGVISVVGDDDVGDEILELLKDRGAKTELIIKEKGRKSSQKSRIM
                     VAHQQVLRLDTESVCEIGVSDDIISKFENILSGYDIVLLSDYGKGVLSPYLTKEIIRI
                     TKKSGKMVLIDPKGKDYSKYSGATLLTPNKKEASEALGFGINDEDDLKHALKMLKDKF
                     KLNYSLITLSEDGIALLDEDVKKFPALAKEVFDVTGAGDSVLATLGYCLASKMSLEES
                     IEIANLAAAVVVGKVGSADASWGEIENLKSKKSGFERKIISLDELLRVDRSGKTMVFT
                     NGCFDILHFGHISYLQSAKKIGDMLVVGLNSDRSVKELKGDNRPVNAQSDRASMLAAL
                     EFVDFVVIFDEDTPLNLIKTLKPDILVKGADYTGKKVVGSEFVREVKLIDFVDGKSTT
                     NIINKIKG"
     gene            complement(4698..5666)
                     /gene="rfaD"
                     /locus_tag="RPW04_000931"
     CDS             complement(4698..5666)
                     /gene="rfaD"
                     /locus_tag="RPW04_000931"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HDX6295028.1"
                     /translation="MKIVVTGGAGFIGSNLAKYFMNDNEVLVVDKFRSNEVFSNGNLK
                     SFGHFKNLIGFKGEIYCGDICSKDTLKQIESFNPDVIFHEAAVSDTTVSEQDEIIKIN
                     LNSFKDLLEIAKNCSSKMIYASSGATYGNAPSPQTVGRFENPGNVYGFSKLMMDELAK
                     EFYAKFKTHIVGLRYFNVYGGGEFFKNKTASMVLQFGLQILSGKTPKLFEGSDKILRD
                     FVYIKDVINANKLAINGISGIYNVGTANPRSFQDIADILQREIGVNLGNEYIKNPYTA
                     QYQFHTQANIATTKNGLKYEPKWSLEDGIKDYLPEIRRIFKEELNG"
     gene            complement(5663..6169)
                     /gene="gmhB"
                     /locus_tag="RPW04_000932"
     CDS             complement(5663..6169)
                     /gene="gmhB"
                     /locus_tag="RPW04_000932"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009651255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HDX6295029.1"
                     /translation="MKKIKAVFLDRDGVINKDLGYVSKIDDFEFCDGIFEALRGFLKL
                     GFALFIVTNQSGIGRGYYTSDDFLNLTKFMLDEFKKEDIYIKKVYYCPHSPEENCDCR
                     KPKPGMILKALSEFDINLKNSIMIGDKNSDMLAANSAGINNCYLIGETSSLKTALDVY
                     KLVFKECI"
     gene            6300..6614
                     /locus_tag="RPW04_000933"
     CDS             6300..6614
                     /locus_tag="RPW04_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDX6295030.1"
                     /translation="MKKILAILAIGLGTTSIFAADGATIFNKCKACHGQKAEKSYLNK
                     VPVLTTVDAAERLALMKEYKAGTVNDGKGKFGMGGVMKGQMATLSEADMAAVNDYIST
                     LK"
     gene            complement(6677..7657)
                     /locus_tag="RPW04_000934"
     CDS             complement(6677..7657)
                     /locus_tag="RPW04_000934"
                     /inference="COORDINATES: protein motif:HMM:NF015737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDX6295031.1"
                     /translation="MSNTAQIVNGHHQFNQNSMLFALNPTSQGLSLARNFETEPILLA
                     SLASDIAIDLGINSYDEKRYIWYMSPSYKKINGDNYSGKSYGLNFTIGAKPSDNSQLT
                     FNTSYLESKLNFEDSNSKSKYVNFGSNYILDLDSVKVLSGASLGFGRNTMQRGLLGSS
                     EILSGSYNNFLASAEFGLAKDLKINSFTITPLSYFSYSYIFQDSFNESGNVFAKSYDK
                     IRHDSTSITAGINLSYDLDKFDVNTKLSGFVIYEYRLSGKDLKNRVKFRDFQNQTFTQ
                     RYALNRDLVYLGFSSQFDYTNSFFMRFDLINEIAKDQYNFNILANLGFKF"
     gene            complement(7650..9707)
                     /locus_tag="RPW04_000935"
     CDS             complement(7650..9707)
                     /locus_tag="RPW04_000935"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012311.1,HMM:TIGR02601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDX6295032.1"
                     /translation="MLIFFIRQAYGNSKPSENLSRLSRDKNTLVVFAAGNEGIVSPGL
                     FGTLPYYDESFRSWLVVGALDSANISKDSNGKIIISSKGSPEFSNGLKGTQNYSLVAP
                     GTNINNVNSPYMIRPSFGRVDRNLYTKKSGTSMAAPMVSGAAALVAQKFPFLNGKEIA
                     DVLLSTANRDYQAPKVVIKETNGLDSDRNSPYFGTKRNYYAIFYIDNPIPRKDDGSID
                     KDQINIDLMSAGYDRALVAGLSQLNNIKYPTLSSHVLVDGGYAAVWEIKKEDMFGQGI
                     LDVKKAMGGLSVLDANRLSHSDIVQNYKQESSAVYYKLDTKGMDAEFSNDISQRKWDS
                     STHNAGALNLPIGLADLNVGFIKNGNGVLKLTGENSYLGATIVRQGGLNISKRADQSG
                     GFISSNVYVENTASLSGDGVIDRNLYNDGIVRPGNQDLSDLTVNGTYEQSSAGTLQLD
                     FGDKKNSKLIAANYNIQGKLEYIPLPAFYTSGSYVSIDLGGLKAHLNDFSNVAVVGNN
                     AINFIAVLDEDKTSINKPDLPQLDINEQDKDNAADQKPDQNPDPILPEPDKDPNPSNP
                     VHPIEPAPKPSDKEDNISGPTQDEVNKPDQNQDKNPDSNNNHNDSDKNPDSNNNLIVT
                     PTVKPDAYNRPNSDIGAALREIRSMANLDKRYKDYFAFLDNADSKNFDKALKTMESIR
                     LYE"
     gene            complement(9673..10206)
                     /locus_tag="RPW04_000936"
     CDS             complement(9673..10206)
                     /locus_tag="RPW04_000936"
                     /inference="COORDINATES: protein motif:HMM:NF012311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDX6295033.1"
                     /translation="MKRCICIVAASVLQVCAVSDLELINAQSAYDDGITGSGIKVGII
                     DGAVRSDHPSLSGKLIEQIYSKDKYGAYTPDFTIDTHGSHVAGIMAGKYINASNPYGV
                     AYDASIYAAQITGHNNIGTLTPPNIYDFFVDKDVSVINNSWNANMYPIVSMQGSTYYV
                     KSLSSRDANFFYSSSLW"
     gene            10434..10748
                     /locus_tag="RPW04_000937"
     CDS             10434..10748
                     /locus_tag="RPW04_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDX6295034.1"
                     /translation="MKNFLLVLACGAFACSAFAADGATIYKKCATCHGLKAEKKYLNK
                     VPVLTEVDAATRLADMKEYKAGTLNAGKGKFGMGGIMKGQMATLSEEDMAAVNDYIST
                     LK"
     gene            complement(10752..10982)
                     /gene="ccoS"
                     /locus_tag="RPW04_000938"
     CDS             complement(10752..10982)
                     /gene="ccoS"
                     /locus_tag="RPW04_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HDX6295035.1"
                     /translation="MGMIIAIMLGISTLLGALALFGLLWGIKNRQFDDYAKFLDGTKY
                     DSEDTLNDAYNMEKRRNELIKKKEADGYRPPD"
     gene            complement(10985..13366)
                     /gene="cadA"
                     /locus_tag="RPW04_000939"
     CDS             complement(10985..13366)
                     /gene="cadA"
                     /locus_tag="RPW04_000939"
                     /EC_number="7.2.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cadmium-translocating P-type ATPase"
                     /protein_id="HDX6295036.1"
                     /translation="MWTFTGNFVCLHCKGEFDDSGAIKDNDGCEFCCNGCKNVYSFLN
                     SNGLGEFYERLGREKHIKASNQTLSEEPCKSFYKNYVKSDGGFCEIYLIIEGIHCSAC
                     IWLNEKVLAHTDGIIEAELNSATNKAHIKWDDNTVKLTEILNKIRAIGYNPIPYDPNK
                     AELRASTKRREFYAKMLVGLFCTMNIMWVAIALYGGYFSGMSQDVKDILHFAEFVLAS
                     PVLFYTGSEFYRSAWMSLKNRSASMDLSVAAGASIAYFYSVYAMLFRQGEVYFDSVAM
                     IITFVFIGKFLEIVSKKRSIDNLDSLSSMLVSEIYVKNGNDFELKDVNEVKEGDIVMV
                     RPGERVQIDGEILNGVGSFDYSSLSGESAPILLKTGDNITSGVICVDGSVEYRTSKSF
                     ESSVLSKIIALLEKASFKKPRIEELANQISARFSFAILALGFATFLFWYIYFGSIPNA
                     VVVAVSVIIIACPCALSLATPVATLIGLGVGLKKGIVFKEARILESLAKCECVVFDKT
                     GTLSKAKLNLIKATKFTEFDQNLLYSLLNVSTHPVSVALKNSLDGSIYQLSDVKNILA
                     RGVKAKFKNISLAGGSSEFMRELGFGEFESESLSYYFAIDGKVAASFELADELRDDAK
                     IVVNDLIKSGYKVVMLTGDKKSVANKVANELGISEFYAETTPIEKSRIIKELNNNMQV
                     VMVGDGINDAVALSSAKVGICLGGGAQISVEKSDVVLLNDSLKSLKDALDISKFTFKT
                     VKQNLGFSLFYNAITIPLAMAGFIIPLFAALSMSFSSIIVVLNSAKIRIKFKG"
     gene            13797..13924
                     /locus_tag="RPW04_000940"
                     /pseudo
     CDS             13797..13924
                     /locus_tag="RPW04_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002948805.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
     gene            14392..15726
                     /gene="rho"
                     /locus_tag="RPW04_000941"
     CDS             14392..15726
                     /gene="rho"
                     /locus_tag="RPW04_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009294026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDX6295037.1"
                     /translation="MENKDNAQSHQSSSGAKKQHTRTHIPVDGYKIEELRQLDLDSLV
                     AIANEVGVENPREFRRQELVFEILKAQTKQGGFILFTGILEIVGDGYGFLRATDANLS
                     DSANDTYVSQSQIKKFALRVGDIITGQVREPREQEKYYALLKIEAINYKSIAEAKERP
                     LFDNLTPLFPNEKIKLEYDPMKLTGRVLDLFTPIGKGQRGLIVAPPRTGKTELMKELA
                     HGITRNHPEMELIVLLIDERPEEVTDMQRSVKGEVFSSTFDLPAINHVRVAELVIEKA
                     KRSVEMGKNVVILLDSITRLARAYNTVTPSSGKVLSGGVDANALHKPKRFFGAARNIE
                     NGGSLTIVATALIDTGSRMDDVIFEEFKGTGNSEIVLDRTISDRRIYPAVNILKSGTR
                     KDELLQGPDDLGKIWAIRNIIATMDDIEALKFLYSKMLKTRDNKELLSIMNE"
     gene            15736..17349
                     /locus_tag="RPW04_000942"
     CDS             15736..17349
                     /locus_tag="RPW04_000942"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDX6295038.1"
                     /translation="MKALALKYRPKSFDELIGQDIVANSLSHALNSGRIGHAYLFSGL
                     RGSGKTSSARIFAKALLCEQGIGSHPCEVCANCVMANEGRHLDIIEMDAASHRKIDDI
                     RELIEHTKYSPSSARFKIFIIDEVHMLTREAFNALLKTLEEPPEYVKFILATTDPLKL
                     PATILSRTQHFRFKPISKHDILKHLEFIMNKEGIKFEPKALEILSRSGSGSLRDTLTL
                     LDQAIIFSHEFVTQKAVADMLGLLDPSKIEEVLSIVASRDRNALLNLLKELSGSDAEL
                     IIDELIINLKDKFINQNSEFSILIFERFFRILSEAKSMLGSGSDSEFTLYIALFMMLE
                     AFNLTDINDAINENLAPKPISISNVLTPKPAQIIPQKPAQKSPYEMFVAGIYDRDYEL
                     GKCFDECIEFVDFSDNSLILSSNANGQNQEILRKSSKIILEILRKIFGKDAKIQIKKA
                     DEPKSVEEKVTSGMQKLLATSVNLEVSKNDVEPTNLEANLQNTQTPAKEPAKISLDNI
                     KNDENSALKSNIKELSRLFGEPEIIKNDY"
BASE COUNT         5860 a         3245 c         2688 g         5652 t
ORIGIN      
        1 aagtatcaaa ataactatat caaaatattt aaaaagcctt gttttgctca cgattttcct
       61 tatgaaataa ttgtattata accaacatta tattaaaaaa taatgtaaaa acagctattt
      121 ttatgttaaa atgattgaat gaaaaagata gtatttctaa gaacagatcc aagtgctact
      181 ggtggggctg aaaggtactt gacacgactt aaaaacgccc ttaaaaactc aggcataaac
      241 tcagagataa gaagttttaa agggaataaa aagttaagtt catggctaaa agcacttaaa
      301 tttaatgctc aagtaaaaaa cgaaaaaaat gaagatgaaa tatacttcag tttagacaga
      361 gtcacatcag ccgatatcta cagggcgggc gatggggtgc ataaagttta tagatcttta
      421 aaaccatttt ggttttttaa tcctttaaat tttgtatatg tttatcttga gaaaagatgc
      481 tttttaaatt ccaaaagcat aatcacaaac tcaaatttga taaaacagca aatcatagat
      541 acgtacggta tcgataaaga taaaataaca actatataca acggtataaa tcttccgaca
      601 aaagtagaaa aaggaagtgc aaaaatgcga ctttgcgaga aattcgggct aaattacgag
      661 cttcctatac tactttttgt aggaagcggt tttaaaagaa aaggagtaag cgagtttcta
      721 agcattatct caaaaatatc actagccata aacacaatta tagtaggtag tgataaaaat
      781 ataaaaaaat ataaaaatct agcaaaaaaa ctaggcataa acgccatatt tacaggcaaa
      841 caaagagtcg taaacgactt ttatgaaggt gctgatatgt ttatatttcc tactcattat
      901 gagccgtttt ctaacgttat tttagaagcc cttagctatg gatgcgtctg cataacaact
      961 agacaaaacg gtgctagcga gatacttgat aaagatttta tcatggatca acctaagagt
     1021 tttgagatag caaatttcat agaaaaaatc ttaaaagaca acaaactgct ttcaaaaata
     1081 caaacttcaa atttagaatt atcaaaaaaa ttcagcatag aagataacgc taaaaaaacg
     1141 atggaaatca taaatgcgca tactaattga actgccgaca tggctaggtg actccgtgat
     1201 ggcgagcgcc gccgtgcaaa gtctagctct aaactatcca aactgtaaaa taactttttt
     1261 tggctcagag attagcacga gtatttacag ctcttatcca aaccgtgaaa atattattat
     1321 cgataattca aaaaaagcta gatttagact attttatctg ctaaaaacag ctttaaattt
     1381 agataaattt gatatagcca taagtttcag aagtcatttc tactcaaaag tattttttaa
     1441 atttataaaa gcagacaaaa aagctatttt tacacctaca aaaaacgaaa ttcatcaagt
     1501 gcaaaaatat ataaatttta ttattgattg tataaattta aaaaaaagca cagatgagct
     1561 aaagctatat tttactcctt ttaaatttaa aaacaaaact ctaggaataa atccaggagc
     1621 aagctacgga agtgcgaaaa gatggtatcc gcaatatttt gcaaacgtag cgataaattt
     1681 aaaagagagt tatgaagttg tcgtttttgg agggaaaaat gaacaaaata tctgcgatga
     1741 aatagcatta gagcttaaaa aaaacggagt taaataccaa aatttatgtt gcaaaaccac
     1801 cgtttgcgag ctcgcaagct ttatagcggg tcttgatatg tttatcacca acgatagcgg
     1861 tcctatgcat atagcagcgg cttttaaggt accgactata gcgctttttg gacctactaa
     1921 gttcaaagaa acttctccat ataaaaacaa caatgcaaag atattgcatc ttgatttaga
     1981 ctgtatgccc tgtatgaaga gagtttgtcc tttgaactcg cacgaatgca tgaaaaatct
     2041 aacaccaaaa atggtgctag atgctattta tacgctaaat ctacagcccc gcaaatagta
     2101 tgaatcacta aaatatgcat ctcttgaatc ctagcagtat cattagcagg tattatcaaa
     2161 tttagatcac acaaatcatt catagcgcct ccgcttttac cgcttagccc aagtgttttt
     2221 agtccatttt gccttgccgt ttttagtgct tttaaaacat ttgcactatt tccgctagta
     2281 gaaattccta tcaaaatatc accgcgtctg cctaaagctg ctgtttgtct tgcaaaaacc
     2341 tcatcatagc catagtcgtt tccgatcgca gtaagagccg aagtatcagt gctaagagcg
     2401 atcccggcaa gcggagttct ctctgtttta taacgcccgg taagttctgc tgcaaaatgc
     2461 tgagaatctg cagcgcttcc gccatttcca catattaaaa ccttaccgcc gttctttaaa
     2521 gtttcaacca ccatttcaca cgcttttaaa acattttcat ttaactcata aaccatgttt
     2581 aaagtctctt tgtgagcttc taactcattt aaaaatatac tcataattac tccttaattt
     2641 atagaaaaat cagccgcggc cttagcatga agcagcgtcg tatcaaatat ctttatatcg
     2701 caatcgtcat cttttattaa aagacctatc tcggtgcatc ctagtatgac gctatctaca
     2761 ccgagttttt ttgactcgtt tattattttt ataaattcaa ttttagagct ttgttttata
     2821 ttgccgatgc ataattcatt gaaaatcacg ctatttataa aatccgtatc agacttattt
     2881 ggaactacta cttctatgga atttttagat attttatctt tataaaaact ctctgtcatg
     2941 gtgtatttgg taccaagcaa aagcgccttt ttagatccgt tttgcttcaa agcttgagca
     3001 gtaacatcgg cgatatggat aaaaggtatt tttaaactag cagttatcat atcggcaact
     3061 ttatgcatag tattcgtaca gatcatcaca cactcggcac cggctttttc taaatttaaa
     3121 gctgcgtcta ataatacttt accacttttt tgccactcgt tttggctttg aaatttttct
     3181 atttcatgaa aatctaagct ataaactata catttagcgc tgtgcaagcc tcctagccta
     3241 tctcttatct cttcatttaa tactttataa tacgtaagag tactctccca gctcataccg
     3301 cctattagcc cgactactct cacaggtttc atccttttat cttattaatt atattcgtgg
     3361 tgctctttcc atctacaaaa tctatcaact ttacttcacg aacaaactcg cttccaacaa
     3421 cttttttacc tgtataatcg gcgcctttta ctaaaatatc gggctttaac gtttttatca
     3481 aatttaaagg cgtatcctca tcaaaaatca cgacaaaatc cacgaattcc aaagcagcta
     3541 gcatacttgc tcggtcgctt tgggcattta ctggcctatt gtctcctttt aactctttaa
     3601 cagatctatc ggagtttagc cctacaacaa gcatatctcc tatctttttt gcgctttgta
     3661 aataactaat atgtccgaaa tgaagtatat cgaaacaacc gtttgtaaat accatagttt
     3721 taccgcttct atccactctt aataactcgt caagacttat aatcttacgt tcaaagccgc
     3781 ttttcttaga cttcaaattc tcgatttctc cccaactagc gtccgcactt cctactttac
     3841 cgactaccac agcagccgct aaatttgcta tttctataga ctcttctaaa ctcattttgc
     3901 tagcaagaca gtatccaaga gtagcaagca cgctatcgcc tgctcctgtt acgtcaaata
     3961 cttcttttgc gagtgccgga aattttttca catcttcatc taaaagcgct attccatctt
     4021 cgcttaaagt aattaacgaa taattaagct taaatttatc tttaagcatt tttaaagcgt
     4081 gttttaaatc atcttcgtca tttatcccaa atcctagcgc ctcgctagct tcttttttat
     4141 ttggtgttag caaagtagcg ccgctgtatt ttgagtaatc tttgcctttt ggatctatta
     4201 aaaccatttt ccctgatttt ttcgtgattc ttataatctc ttttgtaaga tatggactta
     4261 atacgccctt tccgtaatca ctaagcaaaa cgatatcata tccactcaaa atattttcaa
     4321 atttagatat gatatcatcg ctaacgccta tctcgcaaac actttcggta tctagtctaa
     4381 gtacttgttg atgagctacc ataatgcgac ttttttggct ggattttcgt cctttttctt
     4441 tgatgataag ctcggtttta gcgcctctat cttttagaag ttcaagtatc tcatcaccaa
     4501 cgtcatcatc accgacaaca cttataacgc ctacttcgct gccaagagtt ttcaaatttg
     4561 aaacaacatt tcctaaaccc cccaagcgtt tagtttcgtt tttgatattt actacttgta
     4621 cgggagcttc tggggaaatt ctatcgcaac ttccccacac gtaatgatct atcatcagat
     4681 ctcccactac taaaacatta accatttaat tcttccttaa aaatacgcct aatctccggc
     4741 aaataatcct taattccatc ttctaaactc cattttggct catattttaa tccatttttt
     4801 gtagtagcga tatttgcttg ggtatgaaac tgatactgag cagtataggg attttttata
     4861 tattcgtttc ctaaatttac accgatttca cgctgtaaaa tatcggcgat atcttgaaaa
     4921 ctcctaggat ttgccgttcc tacattataa attccgctta taccatttat ggctagttta
     4981 tttgcattta taacatcttt tatataaaca aaatctctta aaattttatc actaccttca
     5041 aataattttg gagttttacc gcttaaaatt tgaagtccga actgcaaaac catagatgcg
     5101 gttttgtttt tgaaaaattc acctccgcca tatacgttaa aatacctaag tccaacgata
     5161 tgagttttga acttagcata aaactcttta gctagctcat ccatcatcaa tttagagaag
     5221 ccataaacat ttccgggatt ttcaaaacgt ccgacggttt gaggacttgg agcattaccg
     5281 tatgtggcgc cgctgcttgc gtatatcatt tttgaactgc agtttttagc tatttctaat
     5341 agatctttga acgagtttaa atttattttt attatctcgt cttgttcgct cacggtagta
     5401 tctgagacgg ctgcttcgtg aaatataaca tctgggttaa aactctctat ctgttttaaa
     5461 gtatctttag agcagatatc gccgcagtaa atctcgcctt tgaagccgat taaattctta
     5521 aaatgcccaa agctttttaa atttccattg ctaaaaactt cattacttct aaatttatcc
     5581 acaaccaaaa cttcattatc attcataaaa tatttggcta aatttgaacc gataaatccg
     5641 gctcctccgg ttactactat tttcatatac attccttaaa tactaactta tacacgtcta
     5701 aagcagtttt taggctgcta gtttcaccga ttaaataaca attattaatg cctgcggagt
     5761 ttgcggctaa catatcgcta tttttatcac ctatcataat tgagtttttt aaatttatgt
     5821 cgaattcgct caaagccttt aaaatcatac ctggctttgg ctttctgcaa tcgcagttct
     5881 cttctggaga atgaggacaa taatatactt tttttatata aatatcctct tttttaaatt
     5941 catcaagcat aaatttagtt aaatttaaaa aatcatcact agtgtaatat cctcttccta
     6001 tgccagattg atttgtaact ataaatagcg caaaaccgag cttcaaaaat ccgcgcaaag
     6061 cttcaaaaat accatcacaa aactcaaaat catctatttt gctaacatat cctaagtctt
     6121 tgtttataac tccgtctcta tctaaaaaaa ccgcttttat ttttttcata aagtgcattt
     6181 tacacgattt tacattaaat ttttatgatt tattttaaat acgatactct tgtttattat
     6241 tgattatatt atcgggttta taatttcaaa tactaaattt ttatttaagg agaaaaatta
     6301 tgaaaaaaat tttagctata ctagcaatag gcttaggaac tacctctatt tttgcggctg
     6361 atggtgctac tatatttaac aaatgtaagg cctgtcatgg tcaaaaagct gagaaaagct
     6421 atctaaacaa agttcctgta cttaccacag tagatgctgc tgagagactc gctcttatga
     6481 aagagtataa agcaggcacc gtaaatgatg gtaaaggtaa atttggaatg ggcggtgtca
     6541 tgaaaggtca aatggctact ttaagcgaag ctgatatggc tgcggtaaat gactacattt
     6601 caacattaaa ataattcaaa atagcaggat aatcctgcta tttcttttaa atttaattaa
     6661 atctaaaaac taatttttaa aatttaaaac ctaaatttgc taaaatatta aaattatact
     6721 gatctttagc aatctcgttt ataaggtcaa aacgcataaa aaatgagtta gtataatcaa
     6781 actgcgaact aaatcctaaa tatacaagat ctctatttaa agcatatctt tgagtaaaag
     6841 tttgattttg aaaatctcta aatttaactc tatttttcag atccttaccg ctcaatctat
     6901 actcataaat aacaaatcca gaaagcttag tattaacatc aaatttatcc aaatcgtacg
     6961 atagattaat tccggcggta atagacgtgc tatcatgtct gattttgtca taagatttcg
     7021 caaatacatt tccgctctcg ttaaaagagt cttgaaaaat ataactatag ctaaaatacg
     7081 aaagcggagt tatggtaaat gagtttattt ttaaatcttt tgccaaacca aattcggccg
     7141 aagctaaaaa gttattataa ctaccgctta aaatctcgct gctacccaac aatcctcttt
     7201 gcatagtatt gcgcccaaat cctaaactag ctccacttaa gacttttacg ctatctaaat
     7261 ccaaaatata atttgagccg aaattaacat atttgctctt agaattcgaa tcttcaaaat
     7321 ttaacttaga ttccaaataa ctagtattaa aagttaactg cgaattatcg cttggttttg
     7381 cccctatagt aaagttaaga ccatatgatt taccgctata attatctccg ttaatcttct
     7441 tataactagg actcatatac caaatatagc gcttttcatc atatgaattt atgccaagat
     7501 caatagctat atccgaggct aaagaggcta acaaaatcgg ttcggtttca aaattacgag
     7561 ctaaacttaa accttgagaa gtaggattta acgcaaaaag catactgttt tgattaaatt
     7621 gatgatgtcc gttaactatt tgagccgtgt tactcatata atcttataga ctccatagtt
     7681 tttaaagcct tatcaaagtt ttttgaatcc gcattatcta aaaaagcaaa ataatcctta
     7741 tagcgtttat ctaaatttgc catagaacga atttctctta aagcagcacc gatatcgcta
     7801 tttggtctat tataagcatc tggttttacg gtaggagtta caattaaatt attatttgaa
     7861 tccggatttt tatcactgtc attgtgatta ttatttgaat ccggattttt atcttgattt
     7921 tgatccggtt tatttacttc atcttgcgtc ggaccagaaa tattatcttc tttatcagac
     7981 ggttttggag ccggctctat aggatgaaca ggattactcg gatttggatc tttatcaggc
     8041 tcaggcaaaa tcggatctgg attttgatct ggtttttgat ctgcggcatt atctttatct
     8101 tgctcattta tatctagttg tggaagatct ggtttattta tagaagtttt atcttcatct
     8161 aaaaccgcta tgaaatttat agcgttatta ccgacaaccg caacatttga aaaatcgttt
     8221 aaatgcgctt ttaatccgcc taaatcgata ctaacataac taccgctagt ataaaaagca
     8281 ggtagaggta tatattcaag ttttccttgt atattataat tggcagcaat tagctttgag
     8341 tttttcttgt ctccgaaatc cagctgcaaa gtgccagcac tactttgttc ataagttcca
     8401 ttgactgtta aatcgcttaa atcttgattt cccggtctta ctataccatc gttatataaa
     8461 ttcctatcga ttactccatc gccgctaaga ctagctgtat tttctacata tacattgctt
     8521 gatataaatc ctccgctttg gtcggctctt ttagagatat ttaagccacc ttgtctaacg
     8581 atagttgcac ctaaatagct attttctccg gttaatttca atactccgtt tccgttttta
     8641 ataaatccaa catttaaatc tgcaagccct ataggtaaat ttaaagcgcc ggcgttgtga
     8701 gttgaactat cccattttct ttgcgagata tcattgctaa attctgcatc cattccttta
     8761 gtatctaatt tataatacac ggcgctggat tcttgtttgt aattttgaac gatatcacta
     8821 tgacttaaac gatttgcatc aagaacggat aatccaccca ttgccttttt aacatccaaa
     8881 attccctgcc caaacatatc ttcttttttt atctcccata ctgcggcgta tccaccatca
     8941 actaatacat gagatgacaa agtaggatat ttgatattat taagttgcga taatcccgca
     9001 actaacgctc tgtcataacc agcactcatc aaatcaatgt tgatttgatc tttatcgata
     9061 cttccgtcat cttttcttgg tatagggtta tctatataaa atatagcata ataatttctt
     9121 ttagtgccaa aatacggact atttctatcg ctatcaagac cgttagtctc ttttatgacg
     9181 acttttgggg cttggtagtc tctatttgcc gtgcttaata acacatcggc tatctcttta
     9241 ccgtttagaa atggaaattt ttgggcaacc aaagccgctg caccgcttac cataggagca
     9301 gccattgaag ttccgctttt tttggtataa agatttctat cgactctacc aaaagaaggt
     9361 cgtatcatat atggagaatt tacgttattg atattcgttc ctggtgcaac caaagagtaa
     9421 ttttgcgttc cttttagtcc gttgctaaat tccggagatc ctttagagct tataataatc
     9481 tttccgttac tatcttttga tatattagca ctatctaaag caccaactac taaccacgaa
     9541 cgaaaagact catcgtaata aggaagcgta ccaaaaagac cgggagaaac aatcccctca
     9601 tttccggcag caaaaacaac taaggtattt ttatcccttg ataatcttga tagattttca
     9661 gatggttttg aattaccata agcttgacga ataaaaaaaa ttagcatccc tagagcttag
     9721 cgatttcacg taataagtac ttccttgcat acttactatc ggatacatat ttgcattcca
     9781 gctgttgttt ataacgctaa catctttatc gacaaaaaag tcatatatat ttggaggagt
     9841 tagagtacct atgttattat gacccgttat ctgcgcagca taaatactag catcataggc
     9901 tactccgtaa ggatttgaag catttatata ctttcctgcc ataattccag ccacgtgact
     9961 accgtgagta tcgatagtaa aatcaggcgt ataagctcca tacttatctt ttgagtaaat
    10021 ttgttcaatc aacttaccag ataagctagg gtgatcgctt ctaacagcgc catctataat
    10081 gcctactttt ataccgctac cagtaatccc gtcatcataa gcgctttgtg catttataag
    10141 ctcaagatcg cttacggcac aaacttgcaa cacagatgct gcaactatac atatacacct
    10201 tttcattaat atttttataa tccttttaaa taattttata tctactaaat tctaattatt
    10261 aaaatttaat aatatataaa tatctaaatc ttatttatta tactattgta taaatttatt
    10321 ctaaatttaa tacaaattta tttttataaa ttaacatatt gaatttatca ttaatccaaa
    10381 atttagtctt ttattattat aattaccgat attttgtaat taaaggatat taaatgaaaa
    10441 attttttact agttttagcg tgtggtgcat ttgcgtgtag tgcatttgca gctgatggtg
    10501 caacaatata taaaaaatgt gcaacatgtc atggtctaaa agctgaaaaa aaatatttaa
    10561 ataaagttcc ggtattgact gaagttgatg cagctactag acttgctgat atgaaagagt
    10621 ataaagcagg tactctaaat gcaggcaaag gcaaattcgg aatgggcggc ataatgaaag
    10681 gtcaaatggc tactttaagc gaagaagata tggcggcggt aaatgactat atctcaactc
    10741 taaaataagt cttaatcagg cggacgatag ccgtccgctt cttttttctt tatcagttca
    10801 tttcgtcttt tttccatatt ataagcatca tttaacgtat cttcgctatc atattttgta
    10861 ccgtctaaaa atttagcgta atcatcaaat tgtctatttt ttatccccca aagcaatcca
    10921 aaaagagcaa gcgctccaag caaagtagaa atcccaagca taatggctat tatcattccc
    10981 atatttatcc tttaaattta attcttattt tagcagaatt taaaacgaca atgatagagc
    11041 taaaagacat agataaagcc gcaaacaaag gtataataaa accggccata gcaagaggaa
    11101 tggtaatagc attgtaaaac agggaaaatc caagattttg ctttactgtt ttaaatgtaa
    11161 atttagaaat atcaagagca tctttcaagc tttttaagct atcatttaga agtacgacat
    11221 cacttttttc aacactgatt tgcgctccgc ctccaaggca aatccctact ttagcactac
    11281 ttaaagctac agcatcattt ataccgtcgc caaccatcac gacttgcata ttattgttca
    11341 attctttgat aatacgtgac ttttcaatag gagtcgtttc tgcgtaaaac tcgcttatgc
    11401 caagttcatt tgcgactttg ttagctacgc tttttttatc tccagttaac atcactactt
    11461 tatatccgga ttttataaga tcatttacca cgatttttgc atcgtctctt aattcatcgg
    11521 caagctcaaa agaggcagct actttaccgt ctatagcaaa ataataactc aaactttcac
    11581 tctcaaactc cccaaatcct aattctcgca taaactcact gctccctccg gctaaagata
    11641 tatttttaaa tttagccttt actccacgcg ctaatatatt tttcacatcg ctaagctgat
    11701 aaatactacc gtctaaacta ttttttaaag caacgctaac aggatgagta gaaacattta
    11761 aaagcgaata caaaagattt tgatcaaatt cggtaaattt agtagctttt atcaaattta
    11821 actttgcctt tgaaagcgtt cctgttttat caaataccac gcattcgcac tttgccaaac
    11881 tctccagaat tctagcttct ttaaaaacga tacctttttt cagtcctact cctaaaccaa
    11941 tcaaagtagc aacaggagta gcgagactaa gagcgcacgg acaagctatt atgatgacgc
    12001 taacagctac aacaacggca tttggaatac ttccaaaata aatataccaa aataaaaaag
    12061 tagcaaatcc aagcgctaat atcgcaaatg agaatctagc cgaaatttga tttgccaact
    12121 cctctatgcg cggttttttg aaactagctt tttcaagtag agctattatc ttgcttaaca
    12181 ccgagctttc aaaactttta gatgtcctat actcgacact tccatccacg catatgacgc
    12241 cgcttgttat attgtctccg gtttttaaca gtataggcgc actctcgccg ctaagactag
    12301 aataatcaaa actcccaact ccgtttaaaa tctcgccgtc tatttgaact ctctcgcccg
    12361 ggcgaaccat tacaatatcg ccctctttta cctcattgac atcttttagc tcgaaatcat
    12421 taccattttt tacataaatt tcagaaacta gcatagagct tagactatct aaattatcaa
    12481 ttgaacgctt tttactaaca atttctaaaa atttccctat aaaaacaaaa gttattatca
    12541 tagctactga gtcaaaatat acctcgcctt gcctaaaaag catagcataa acggagtaaa
    12601 aatatgctat ggatgcgcct gctgcgacac ttagatccat agaggcactt ctgtttttca
    12661 aactcatcca cgctgagcgg taaaactcac ttccggtata aaataaaaca ggacttgcta
    12721 aaacaaactc ggcaaaatgc aaaatatctt tcacatcttg actcattccg ctaaaatatc
    12781 caccgtacaa agcgatagca acccacatta tattcatcgt acaaaataga ccgacaagca
    12841 tttttgcgta aaattctcta cgcttcgtgc tagctcttag ctctgcttta tttggatcgt
    12901 atgggatcgg attatatcct atggctctta ttttatttag aatttcagta agttttactg
    12961 tattgtcatc ccattttata tgagctttat ttgtagccga gtttaactct gcttctatga
    13021 taccatcggt atgagctaag actttttcat ttagccagat acaagcagag cagtgaattc
    13081 cctctataat aagataaatt tcacaaaatc caccatcgct tttaacataa tttttataaa
    13141 aacttttgca cggttcttcg cttaaagtct ggtttgaagc ttttatgtgt ttttctctac
    13201 caagtctctc gtaaaactcg ccaagaccgt ttgagtttaa aaacgaatat acgtttttgc
    13261 agccattaca acaaaactcg cacccatcat tatcttttat cgctccgcta tcatcaaact
    13321 cgcctttaca atgcaaacag acaaaattac ccgtaaaagt ccatatttta aatttgtttt
    13381 gattatataa aaatattgct taatatatat aatttgttct atttttgtca caaataaatt
    13441 taaaaaagaa agttttaagg ctaaaaatcg gtataaaata atgcataaat ttatgtgaat
    13501 ctaatatttg tcatcgcttt atctttttat gtcttttaaa aaataactaa aatataaatt
    13561 tatatgaaat aaagtttaaa tttactttaa ttacgcatta taaatagcaa aacaaaaaaa
    13621 ggagagtttg cgagaaggat catttttggt ttggtcgctt tagccatagt ggctatggct
    13681 gggaacaatt aagacgggtt taggcgtata gaagcggaga ctacacaaag gctgcaaagc
    13741 tatatcaaaa gtcttgcgac tccagagata ctggtggttg ctttggtctt ggatttttgt
    13801 atgaaaacgg taaaggcgtg aaacaaaata gatcaaaagc aaaagagcta tacggtaaga
    13861 ctgtgatatg ggagcgcaac ttggctgtga aaattacgct gatttaaata gcaaaggcta
    13921 ctagataaaa gcgaagcggt agtatgatac cgcttttgaa tgatataaat ttatctttta
    13981 gagtgtttat aagtcgtaaa aaactaggct tgaaagcact agtataaaag tgcttactat
    14041 aaaagtcggt ttatagccaa aactttttct ttgaattttg gagagaattt atatccttac
    14101 gccgcaatcg atcatcctat actctttatc attttgctca cataaatacc agcaaatact
    14161 agtaattcct atatcaaagg tcggtatttt catatcgaat tcctttttta tctaatcata
    14221 attaataaaa aatattttac aagaaaaata cttaatttat aaacgcttgt aaaatttaaa
    14281 ttgcattgat gatcttgaca agtttataat ttttgtataa aatcccagta ttaaaactac
    14341 ataattacta ttcattgtga ctgcatatta tcacaaattt aaagaggttt aatggaaaat
    14401 aaagataatg cccaatccca ccaaagttcg tcgggtgcaa aaaaacagca cactcgtaca
    14461 cacattccag ttgatggata taaaatcgaa gaattaagac aacttgatct tgatagctta
    14521 gtagccatag caaatgaagt cggcgttgaa aatccacgag aatttagacg ccaagagctt
    14581 gtttttgaaa ttttaaaggc tcaaacaaag caaggcggtt ttatattatt tacaggaatt
    14641 ttagaaatag taggtgacgg atacggattt ttaagagcta ctgatgcgaa tttaagcgat
    14701 tcggcaaacg atacatacgt aagccaaagc cagattaaaa aattcgctct tagagtagga
    14761 gatatcatta ccggacaagt aagagaacca agagagcaag agaaatatta cgctttatta
    14821 aaaatagaag cgataaatta caaatccata gcagaagcaa aagaaagacc actttttgac
    14881 aatctaactc cgctttttcc aaatgaaaaa ataaaactcg aatatgaccc tatgaaacta
    14941 acagggcgtg ttttggatct atttactcct attgggaaag gtcaaagagg tcttatagta
    15001 gctcctccga gaacaggtaa aacagagctt atgaaagagc ttgctcacgg tataacaaga
    15061 aatcatcccg agatggaact aatagttctt cttatagatg agcgtccaga agaggttacc
    15121 gatatgcaac gctcagtaaa aggagaggta tttagctcta cttttgacct gccggctata
    15181 aatcacgtaa gagttgccga gctagtcata gaaaaggcaa aacgttcagt agagatgggg
    15241 aaaaacgtgg ttatacttct tgatagcata actcgtcttg cgcgtgctta taatacggtc
    15301 actcctagta gcggaaaagt actaagcgga ggagtagatg caaacgcgct gcataagcca
    15361 aaaagatttt ttggagcagc aagaaatata gaaaacggtg gaagcttaac catagtcgca
    15421 acagccctta tagataccgg ctcacgtatg gatgatgtga tatttgaaga gtttaaaggt
    15481 accggaaata gtgaaatagt gcttgataga actatcagcg atagaagaat ttatccggct
    15541 gtaaatatac ttaaatccgg aacaagaaaa gatgaacttc ttcaaggacc agatgatctt
    15601 ggtaaaatat gggctataag aaatattatc gcgacaatgg atgatataga agcacttaaa
    15661 tttttatatt caaaaatgtt aaaaacgaga gataacaaag aacttcttag tataatgaac
    15721 gaataggact aaaatttgaa agctttagca ctaaaatacc gtccaaaaag ctttgatgag
    15781 ctaattggtc aagatatagt agcaaatagt ctatctcacg ctctaaactc aggaagaata
    15841 ggacacgcgt acctattttc cggacttaga ggtagcggta agacaagtag cgctagaatc
    15901 tttgctaagg ctctgctttg cgaacaaggt attggatctc atccgtgtga agtatgtgca
    15961 aactgcgtaa tggcaaatga ggggcgacat ttagatatta tagaaatgga cgccgcaagt
    16021 catagaaaaa tcgatgatat aagagagctt atagaacata cgaaatactc tccttcaagt
    16081 gctagattta aaatttttat cattgatgaa gttcatatgc taactagaga agcgttcaat
    16141 gctctgctaa aaacacttga agaaccgcct gaatatgtaa agtttatatt agctacaaca
    16201 gatcctttaa aactacctgc caccatacta tcgcgtactc agcatttcag atttaaaccg
    16261 atatcaaaac atgatatttt aaaacatctt gagttcataa tgaacaaaga gggcataaaa
    16321 tttgagccaa aagcactaga aattctttca agaagtggat ccggaagctt gcgagatacc
    16381 cttactttgc ttgatcaagc cataatattt tctcacgaat tcgtgacgca aaaagcagta
    16441 gcagatatgc tcggtctgct tgatccatca aagatagaag aagttttatc gatagtagct
    16501 tcaagagata gaaatgctct tttaaattta ttaaaagagt taagcgggag tgacgccgaa
    16561 cttataatag acgaacttat aataaattta aaagataaat ttataaatca aaactcggaa
    16621 ttttcgattc ttatttttga gagatttttc agaattttat ctgaagcaaa aagtatgcta
    16681 ggatctggaa gcgactcgga atttacactg tatatagcac tttttatgat gcttgaagcg
    16741 tttaatttaa cagatataaa tgacgccatc aatgaaaatt tagctccaaa accgatatcc
    16801 ataagcaacg ttttgacacc aaaaccagcc caaataatac ctcaaaaacc agcccaaaaa
    16861 tctccttatg agatgtttgt agctgggatt tatgatagag attatgagct tggaaagtgc
    16921 tttgatgagt gcatagagtt tgtggatttt agtgataatt ctttgatttt aagttcaaat
    16981 gcaaatggcc aaaatcaaga gattttaaga aaatcatcta aaataatctt agaaattctt
    17041 agaaaaatat ttggcaaaga cgccaaaatc caaatcaaaa aagcagatga gccaaaaagc
    17101 gtcgaagaaa aagtaactag cggtatgcaa aagcttttag caacgtctgt aaatttggaa
    17161 gtaagtaaaa acgatgtaga acccacaaat ttagaagcaa atttgcaaaa cacacaaaca
    17221 ccagcaaaag agccagctaa aattagctta gataatatta aaaacgatga aaactctgct
    17281 ttgaaatcaa atataaaaga gctttcaaga ctttttggcg aacctgagat tataaaaaat
    17341 gactactaat tatttttgtt tggatattta gatttaattt ttttatttat caatgccact
    17401 acaaaaatgt aagttataag agataaaatt ataaagaaat ttctt
//
LOCUS       DAPPKW010000031        17233 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.031, whole genome shotgun sequence.
ACCESSION   DAPPKW010000031 DAPPKW010000000
VERSION     DAPPKW010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17233
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.031"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(45..323)
                     /locus_tag="RPW04_000943"
     CDS             complement(45..323)
                     /locus_tag="RPW04_000943"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295039.1"
                     /translation="MKFEELEFSGLPDNFLCQKVCEIYKITNKELSDKLGIEIEVLNS
                     LQDNDVRLPKSAKVALELMHIIDIWYNTDLIFKERVVKDETKQEIKTI"
     gene            complement(370..1368)
                     /locus_tag="RPW04_000944"
     CDS             complement(370..1368)
                     /locus_tag="RPW04_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit M"
                     /protein_id="HDX6295040.1"
                     /translation="MNHKNQLNQETNWMSNKEKKPNIYFMKAKYEIDDEFYTSYHEIK
                     KELDDYKSHFKGKIVVCPCNDSRKSNFYRYFSLNFKALELKKLITTTFDISDPNSKGT
                     KIEITNDSASETELQGRGDFRSDEVKEIIAQGDIIVTNPPFSLFRDLIDIVESYNKKF
                     LIVGGTYSITYKKIFELYEKGKIWLRNHQVCIFTRPNGTKKRFSNISWFTNLKSIKHL
                     EPIKLTKRYKNNEHKYPEYDNYKVIEVTSYKDIPIDYYGIIGVPLTFFLRHNPAQFNI
                     LGCDFQIKEKYPELVKWDYKENNTKSAVLNGQEMFTRIIVQRKSGLMPRIRLQNQL"
     gene            complement(1525..3921)
                     /locus_tag="RPW04_000945"
     CDS             complement(1525..3921)
                     /locus_tag="RPW04_000945"
                     /inference="COORDINATES: protein motif:HMM:NF023351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter beta-barrel
                     domain-containing protein"
                     /protein_id="HDX6295041.1"
                     /translation="MIINLILLVTILVSTINGSNFIIYDDLGNNIENIEKEIVDNKRN
                     FFSFNDDFIIYDDLGNNIENNPKEAIYQNKIENPKNPVDKITSSKPAKVKPKIIEKTE
                     PEVLSTKLSVNKIVKIPSSTKSINLNKTNTQNSKTEQQAELEKTQQKSIEIAQTAYSL
                     IQTEDKSNSIKSFAANYASGKINQGIKEFIDSYANGARSEISFRYDTKNHKMNGSGKV
                     LVPYTSDDFVKTVFIQNGVGQFNNRWISHAGAGIRFFPDAKSYTDVGNLMFGFNSVYD
                     YDLSRYHQRLSVGAEVMYKNLLLTGNLYERLTSWRNSKDFESGYVEERPANGYDIKVK
                     FAIPDYERLALTAEYVPEPTQIDGEKVDITATVYSVEFETPVIIKVFGNNPDDISIDR
                     TVIGENEFAKVIYKNLRPNTNVTFRIDGTGGVLTDKTTEFGTNASISVNEAGEAIIYV
                     KGQDLANSNLKVFAKNSDPLVSEKSVNLNIKNYTADMTLPTWNSSLYGNHQNTIDYKE
                     NFKIKVSNLMPNTTVTWSATNGATPNATTSQVAKDGTTEMDFSSIDDFSIRDTDITIE
                     YNKNESVKTSMTKKLNLYQYQLNLTTDKSEIIGDEQYVATLSGGKPGEPVTWTVTGDS
                     QEISKEEVFDENGKAKYTAQGKSPFLSNINLSVQNPIGITKKEILVTNEVNFFENSFS
                     NHHSVTLGEAVAGKTYKKTLTYKTSQWKYVYAIRIQGNLSIDKYDVGYLYVNNILYRS
                     DNAMSGNYNTNINVYKEQTMASEQLTIINSCTDYFTDSDWTNGMNYSFANFKVTLYLR
                     "
     gene            complement(3926..5866)
                     /locus_tag="RPW04_000946"
     CDS             complement(3926..5866)
                     /locus_tag="RPW04_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IA DNA topoisomerase"
                     /protein_id="HDX6295042.1"
                     /translation="MQNTIIIIESPNKCDKIEHITGAKVYATKGHFKELTNQIVADYQ
                     SYEPIFDFKGESKSRINAMFNDCKGKDVIIATDPDREGYGIGYMVYDTIKNIAKSVKR
                     AEFHEITESGIKKGLESAVPFASSNLKEFDSFKARAVGDKLVGFIMSPTYINKLNDKN
                     ISVGRVQTPALALIVKRELEIKAFNENKANAKIDYKIKAKLRTRDGIEFNALNDNIFV
                     SKDEANAKISDLNGFNAKVYQIDTKETQIKPKLPFRTSQLQEIANKKLLFSPDKTMSI
                     AQKLFEKGLITYHRTDSNSLSNEFIDEVGAKFGDEEWYEKREYKAGAQSQAEAHEAIR
                     ITHVHNFISIDEMALTDDDKRLYELIYLNSIQSQAKNAINENTIYDIDIKTLSFKTKT
                     SKCIYKGFKGALKEEIEDDEDKDKEILEISLNLKQGDEVELMGFELQEVKKQPPQHYK
                     ESNFISLLEKEGIGRPSTYATFLPTLLKREYVTIETKGKNNNIVATNKGIKFIENIKQ
                     DDDWITQSEFTKQMESVLDEISSGKVSYLDFIKPLHEKMGFKELNNSQTNPPSEKQLE
                     WAKNIAQNLKISLPNGIENSWKICSDFIEKNKDKVVTPPTDKQIELAKKLSKDKGMAL
                     PKDYDTNLKICKEFIDKAIKKK"
     gene            complement(5848..6435)
                     /locus_tag="RPW04_000947"
     CDS             complement(5848..6435)
                     /locus_tag="RPW04_000947"
                     /inference="COORDINATES: protein motif:HMM:NF024911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDX6295043.1"
                     /translation="MNKLVINIYGSPGAGKSTLAKNLKKYMREKRIDVGLISEFATEL
                     IENNQKEKLKDQPYVTKGQMLNITRVLKKHDIAISDSPIELGKFYCDPRDEQRTNELI
                     KKCKNMYKSINFFLKLDEQAKQDYTMERRVHTYAQSKKLQEEMLSSLILNDKTSIIIY
                     RSTPIKEIFKMIEKSKQWNKHQNQNKGLELCKTQS"
     gene            complement(6454..7653)
                     /locus_tag="RPW04_000948"
     CDS             complement(6454..7653)
                     /locus_tag="RPW04_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009495770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein"
                     /protein_id="HDX6295044.1"
                     /translation="MAQTQVAKDLLTDSNWINKTQNIIQENVMSLFEKFYQGAHDLVY
                     STATTTIVILIVSLWLLNRLKNGYPTRNEIFVAVKYIIQLCFIFAILSSFDAYQGVLY
                     ALTIPENVIITILSSIFEGRDFGAIVTESANRVDNIRALMWNYGTTEYLKTQAWSFLG
                     ISFNGVMDYLGAGIITALSMIPFWIFYIVFFLLLVGITIVIFFSKFMAFLILSTLPLV
                     IPFLIIPRFLPYLWSWYKLYLSYAIIAPLAFIALNLAINPILELENYQNYISELFVKQ
                     FEYLITGSITCISALFLLKKIPSWINAVLGTQMESGSGGVVGGVVAGAVASKTLLGGL
                     ARKATGGSFVGGALSSLGAASGANVAGQIASASIGAGANVAKDIGRGIGKTYEAYKKF
                     KGGYVAP"
     gene            complement(7702..7977)
                     /locus_tag="RPW04_000949"
     CDS             complement(7702..7977)
                     /locus_tag="RPW04_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295045.1"
                     /translation="MLNEFLNFLGFNKAVCKKQLHTDNTDIKENVEMQEYIVEMQSPD
                     FKEETTTETVIKDGKKIEIQKIKTTEPLNNGKTLITTKIYKKDITRM"
     gene            complement(8038..8865)
                     /locus_tag="RPW04_000950"
     CDS             complement(8038..8865)
                     /locus_tag="RPW04_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HDX6295046.1"
                     /translation="MEQVRKSWEQMDNAEKKESFDKYMKFKLFEAHKTGKADWQKDMS
                     KEEVDNTMPYNAKTGNTYSRETNMLLRAEMAIKGYDKAQFVTMEQGNAMGGVLKLKHD
                     EQTGEVVKTKNGKDARVDGVKMLYIADHELRPKLDKDGKEVTAVVKDKDGNVKYDQET
                     GQPMTYVVKEKIPIKPRLETKTLYHVSQFDGLDESKIKDRDLTAVTHYREQSKNQDFE
                     VKISYGKTLGISGNLEKQLDNLTLAQIKGVDYYNPAVKVEMTKQKAQTKEQNKGMER"
     gene            complement(8925..9101)
                     /locus_tag="RPW04_000951"
     CDS             complement(8925..9101)
                     /locus_tag="RPW04_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295047.1"
                     /translation="MTYQEKLEQEKAYKEYEKHLAEQFAQSEDGEFEISDSECKGLEY
                     LKQAHQEIGSTDKN"
     gene            complement(9289..11208)
                     /locus_tag="RPW04_000952"
     CDS             complement(9289..11208)
                     /locus_tag="RPW04_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HDX6295048.1"
                     /translation="MDDTQKFSTKKWIIIFISSLIMGVLAYLAMVKVIFNPDLVNVPA
                     VAIKILNNIGSPMLKLKAYVALFALVAPFLVVVAWWLMPYFSDNENYGSARFATPDDF
                     KKMSINYKNGLVLGCLNIDSENPKFLRATRPLATLVVAPPGSGKTAGMIIPNLLSIPN
                     SSVTLDIKGELYQKTAGYRQKYFKNEIQLFSPFSWDNTLFFNPFDYSIVKDMEYIRIK
                     KLADQIANTIFVAEKEKENDHWVLSAKTLFVFFAEYFMQKNKHTTLGELAQAPKADYF
                     DYLDEKFGEEAMKEIDEDNPEAPRERDYDVDTFKIWLKQTANDTSIDESTRNQARAYA
                     KAAENEFASIKSTYDTFMKVFSHPQVASATSKMSFAFEDLREKRISMYVVIQTEDMEI
                     LAPLIRIFIETLFKKLMSGKENSDPDKFIYCFLDEFVRFGKMPFLLEAPALCRSYGLL
                     PVFVTQAYEQIKKYYGEDDMNIVKNNSGYHVIFGMNSEKDAKDTSELIGDYTNIKISK
                     SQGNMDLFKSNISKSKEAKRLVTAQDLKNQDSNDIYILVSKFFKMPIKAKVPYWFKIV
                     QFKGANEIEVKAIAQKEQTNTHKPQDTNILQNSPATAQQNSQKTNESKVEVADMDKQQ
                     RDELLKALKIKVDRE"
     gene            complement(11201..11635)
                     /gene="mobC"
                     /locus_tag="RPW04_000953"
     CDS             complement(11201..11635)
                     /gene="mobC"
                     /locus_tag="RPW04_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004319324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid mobilization relaxosome protein MobC"
                     /protein_id="HDX6295049.1"
                     /translation="MKKTRHHIYLTEADDRILRKLSDKQNQSRSAIVRKLLQTQKYKD
                     NLKEIETNNRIIGGYLKEFSHIGTNINQIAYHLNANITDHEEAKTDFEKNIVKLMQII
                     KELNEKIDTLKIKINVPHIKTPSNIKERDRMEEYEIKRKENG"
     gene            complement(11632..12576)
                     /gene="tadA"
                     /locus_tag="RPW04_000954"
     CDS             complement(11632..12576)
                     /gene="tadA"
                     /locus_tag="RPW04_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004319283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly complex ATPase component
                     TadA"
                     /protein_id="HDX6295050.1"
                     /translation="MAESIILNNILGVLKPYLNLNANELIFNKPCEINIDYGDHWEIV
                     QDPKLDARFLNSFLVELATRRNQRFDESHCHLSCELPSPFLRYRVQAQHKSSLFNSEI
                     AICIRIPSKEIYPLESFILSDKCIKDGWNYDKIKELIHKKKNVLLSGGTGSGKTSFLN
                     SLMGEIDPNERVVTIEDSQELRVENINKTQLAVPKIATEIYSYQVAIDNAMRLRPDRL
                     FLGEIDIRNTFSFLRVNNTGHAGNLSTLHANSPRDAIKAIKTNVILGGGLSNVDDGMI
                     DSLIITAIDYIIQITRVKNKRVVTDILNLKEDMGKIVA"
     gene            complement(12578..12799)
                     /locus_tag="RPW04_000955"
     CDS             complement(12578..12799)
                     /locus_tag="RPW04_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004319287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295051.1"
                     /translation="MEYEIIKEQINAELQNKKTNDKLLEKIAIQLKKIEKAETVYLKE
                     KAKLENLVAQKQNLSNGVTTKQVEQDKEE"
     gene            complement(12813..14021)
                     /locus_tag="RPW04_000956"
     CDS             complement(12813..14021)
                     /locus_tag="RPW04_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA type IV secretion system protein ComB10"
                     /protein_id="HDX6295052.1"
                     /translation="MKKGNKKLFLSLATISILSTPLFANNQEAVLNLDNGNKSKLDRQ
                     IRNLQNQADLSHLFENSKFPVDDYIYKAGKREPNQDQNLTQILKDFEKLDQKQKAQAA
                     DKNLIQPSQYAEQEQEEMTQHIKQKQEELQAQQEQLRQEITMDSQKAYKKRMQELIRA
                     QILANRNNEVKSVNQNSSKFGVDGFSNQKSIDISTNEHRLYRTIRAGRMIPAILTTAI
                     SSDLSGIVTAQIEQDIYASMGRAVLIPRGSKAIGFYTNNTKIGHERLEIRWREIITPQ
                     GINIMLTDALVADNMGMAGAIGAINNKYWERYGIAYSISTITNGIMLGIASKMNTNGS
                     ANNQYATEMYSNAKSDISSIVQDIMQQQSQIKPTIEIRSGSRIFLVPTNHMWFAKPKN
                     GEVLMQYFND"
     gene            complement(14023..15198)
                     /locus_tag="RPW04_000957"
     CDS             complement(14023..15198)
                     /locus_tag="RPW04_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbG/VirB9 family P-type conjugative transfer
                     protein"
                     /protein_id="HDX6295053.1"
                     /translation="MKNLIKISLITLIALNLNAQQAGLSEAQMNEVRAIMRQTQELVN
                     ERQDLSMGENIFNDKNKDINNQFQSNFKVNPLGMYGQGDQVQMPKFNNGNHPAMQNQN
                     MITMEQPQELSKEELELMQNAIRNQDLKALQNKFHSKKYSGYENTQTIKYTPNKTHKI
                     RTRHAMATTLIFDSNIDNFVLGDQTGFKIEQIPSKANAIAIIPQLIGIDTSLTIFTGD
                     GKIHTFYIFSTDYKNSKDPSFLIYIQDDETKKVIEENKIDDSQYLIIKDGIAELKINK
                     NDINRDFIQKALKENEWLVAQEIFSDKKFTYFKYSKEKMPQIPAIFAVIDRQDSPVET
                     RIIGDYIIAETISPKFSIKSGESYVCVEKKVNLNTDKEAIKQRQKEHNKAIKEAKGI"
     gene            complement(15195..15845)
                     /locus_tag="RPW04_000958"
     CDS             complement(15195..15845)
                     /locus_tag="RPW04_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004319155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein"
                     /protein_id="HDX6295054.1"
                     /translation="MPYEDKKFDPNFIFKTERNIKAYMLYVILALALVSISLSVAIAL
                     LTPLKETKPVLLKFSDGDSRFVTIDDTNLNVRNNEELLKSILAGYVKNRELINRIDDA
                     QRYNEIRTQSSRQVWEAFQNLVSDPNSIYTTKNYYRDIKIINVAILSQNVATIDFQAE
                     ITNPTRTEVSYKKYRSAIEYDFRNQSSNYVDTLKNPTGFIVDKYQVTQILDEKGKK"
     gene            complement(15974..>17233)
                     /locus_tag="RPW04_000959"
     CDS             complement(15974..>17233)
                     /locus_tag="RPW04_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system DNA-binding
                     domain-containing protein"
                     /protein_id="HDX6295055.1"
                     /translation="SRGNLNARKKTLNISNLATIANFENEVTGFNKNDWGDEAVTTFR
                     HLNGTPYLFNFHWQPDGDRPAGHTMIMGGTGSGKTTTIQFLMANLFKYKINIFALDKL
                     RGMYNFTNYMDGEYHDSESDGFKLNPFSLADTIENREFLTSWLGSMAEIKVEEHEATK
                     DIRETINRLYDNKQADQIISLSDFIDSLPADNESKLKTRFGNYKDSIFDNKEDALNFT
                     KQLSVLNMDGVLQNKKISALTAMYVFHRLKNQAKNSQDKRGFFCFIDELKDYLRDEVM
                     SEKILEGILEWRKIGGVGCFGFQSISLFNGNERGSSFLDNIANFIIFPTNSEETLKEL
                     SDTIGLTPTEAKFLKETQSNARQVLLKMKLRNESAKLNLDISSLGNYLRVFSSSSDNV
                     ILMKKLKADSPVHWRKYYLEYKEQRRS"
BASE COUNT         4342 a         3090 c         2622 g         7179 t
ORIGIN      
        1 agtgtattgc caaaaaagcc caaataaatt gctttaatgg gctattaaat agttttaatt
       61 tcttgttttg tttcatcttt aactactcgt tctttgaaaa ttagatcagt attgtaccat
      121 atgtctatta tatgcattaa ttctaaagct actttagctg attttggtaa tcttacatca
      181 ttatcttgaa gagaatttag cacttctatt tcaattccta atttatctga taattcttta
      241 tttgtaattt tataaatttc gcaaaccttt tgacataaaa aattatcagg taatcctgaa
      301 aactctaatt cttcaaattt cattttttgt ctccttgttt tttattttta aatttcattt
      361 ctgttctcgt tataattgat tttgtaatct tatcctaggc attaagccac tttttctttg
      421 cactattatt ctcgtaaaca tctcttgtcc gttaagtacg gctgactttg tgttgttttc
      481 tttataatcc cattttacta gctcagggta tttttctttt atttgaaaat cacaccctag
      541 tatgttaaat tgagctggat tgtgccttaa aaaaaacgtt agcggcacac cgattatgcc
      601 gtagtaatca atcggtatat ctttataact agttacctct attaccttat aattatcata
      661 ttcagggtat ttatgctcgt tgttcttata tcttttcgtt agttttatcg gttctagatg
      721 cttgatgctt tttaaattcg taaaccagct aatatttgag aagcgttttt tcgtgccgtt
      781 tgggcgtgta aaaatgcaga cttgatgatt tcttagccag attttacctt tttcgtatag
      841 ctcaaatatt tttttatatg tgattgaata tgttccaccg acgattaaaa attttttatt
      901 gtaactttct acaatgtcga ttagatctct aaaaagggag aatgggggat ttgttacaat
      961 tatgtcgccc tgtgcaatta tctcttttac ttcatcgctt ctaaaatcgc ccctgccttg
     1021 tagctctgtt tcactcgcac tatcgtttgt gatttctatt tttgttccct ttgaattcgg
     1081 atcgctaata tcaaacgtgg ttgtgattag cttttttagc tccagtgctt taaaatttaa
     1141 ggaaaagtat ctataaaaat tacttttcct actatcattg caaggacaca ctacaatctt
     1201 gcctttaaaa tgagacttat aatcgtccag ctcttttttg atttcatgat agctcgtgta
     1261 aaactcgtcg tctatttcat attttgcttt cataaagtag atgtttggtt ttttctcctt
     1321 attagacatc cagtttgttt cttggtttaa ttggttttta tgattcattt ttcatttttc
     1381 tcctttttta aaaaagcttt cctatttgcc cccaaccagc cctacagtaa agtccccaaa
     1441 cttttccctg tctaagatct actttgatac cgcttgagtc tcttccatac catggattga
     1501 taatataact ctaatatcaa gtgattatct caaataaaga gttaccttaa aattggcaaa
     1561 cgaatagttc attccatttg tccaatcact atctgtaaaa taatcagtac aagagtttat
     1621 aatagttagc tgttcagaag ccatagtctg ctctttatat acattgatat tagtattata
     1681 gttcccactc atagcattat cacttcgata aagaatattg tttacataaa gatagccaac
     1741 atcatattta tcaatactca gattaccttg aatacgaatg gcatatacgt atttccattg
     1801 cgaagtttta taagttaatg tttttttata tgttttacca gcaaccgctt ctcctaaagt
     1861 tacagaatga tgatttgaaa acgaattctc aaaaaaatta acttcgtttg ttactagaat
     1921 ttctttttta gttataccta taggattttg aacgcttaaa tttatgttgc tcaaaaacgg
     1981 tgattttcct tgtgcagtat attttgcctt tccattttca tcaaaaactt cttcttttga
     2041 tatctcttga ctatctccag tcactgtcca agtaactggt tcacctggtt ttccgccact
     2101 aagagttgca acgtattgct catctccgat gatttcagat ttatctgtag tcaaatttag
     2161 ttgatattga tacagattta gctttttagt catcgatgtt tttacgcttt cattcttatt
     2221 gtattcgatt gtaatatctg tatctctaat agaaaagtca tctattgaac taaaatccat
     2281 ttcagtagta ccatctttgg ctacttgtga agtagtagca tttggtgtag ctccatttgt
     2341 agcactccaa gtgactgttg tatttggcat tagattagat acttttattt tgaaattttc
     2401 tttataatca attgtatttt gatgatttcc atataaagac gaattccatg ttggaagtgt
     2461 catatctgct gtgtaatttt taatgtttag gtttactgat ttttcgctta caagtggatc
     2521 agaatttttt gcaaaaacct ttaaatttga attagccaaa tcttgacctt taacataaat
     2581 tattgcttct ccagcttcat taacagatat acttgcattt gttccaaatt ctgtagtttt
     2641 atctgttaaa actccacctg tgccatctat tctaaaagta acatttgtat ttggtcttag
     2701 atttttatat attacctttg caaattcatt ctctccgata actgttctat cgattgatat
     2761 gtcatctgga ttgtttccaa atacttttat tattactggt gtttcgaact ctacactata
     2821 cacagtagct gtaatatcaa ctttttctcc atcaatttgc gttggttctg gaacatattc
     2881 agcagtcaat gctaatcttt cataatctgg aattgcaaat ttcactttta tgtcataacc
     2941 attagctggt ctttcttcaa catatccgct ctcaaaatct tttgagtttc tccaacttgt
     3001 taatctttca taaagattac ctgtaagaag taaattttta tacattactt cagcaccaac
     3061 acttaagcgt tggtgatacc tacttaagtc ataatcatat acactattaa atccgaacat
     3121 taaatttcca acatcagtgt agcttttcgc atcaggaaaa aacctaattc cagctccagc
     3181 atggcttatc caacgattgt taaattgccc aactccgttt tgaataaata cagtttttac
     3241 aaaatcatca cttgtatatg gaacgagaac ttttccacta ccgttcattt tatgattttt
     3301 ggtgtcatat ctaaaactta tttcgcttct tgccccatta gcatagctat ctataaattc
     3361 ttttattcct tgattgattt ttccacttgc ataatttgca gcaaagcttt taattgaatt
     3421 tgacttatct tcagtttgta taagactata agcagtttgg gctatctcta tgcttttttg
     3481 ttgagttttc tcaagttcag cttgttgctc ggtttttgaa ttttgagtgt tggttttatt
     3541 taaatttatt gatttagtag agcttggaat tttgactatt ttatttacgc taagttttgt
     3601 agataatacc tcaggttctg ttttttcaat aatcttaggt ttaacttttg ctggtttaga
     3661 agaggttatt ttatctactg gattttttgg attttctatt ttattttggt aaatagcttc
     3721 ttttggatta ttttctatat tatttcctag atcatcataa atgataaaat catcattaaa
     3781 actaaaaaaa tttcttttgt tatcaactat ttctttttca atattttcta tattatttcc
     3841 tagatcatca taaatgataa aatttgatcc gttgattgtt gaaactaaaa tcgtaactaa
     3901 taaaataaga ttaattatca ttttattatt ttttctttat cgctttatct ataaactctt
     3961 tacaaatttt tagatttgtg tcataatctt ttggcagtgc cattcctttg tctttagata
     4021 gcttttttgc tagttctatc tgcttgtccg ttggcggagt tacaacctta tctttatttt
     4081 tctctataaa atcagagcaa attttccaac tattttctat gccatttggt aggcttattt
     4141 ttaaattttg tgcgatattt tttgcccatt caagctgttt ctcacttggt ggatttgttt
     4201 ggctattatt taactcttta aagcccattt tttcgtgtag aggctttatg aaatcaagat
     4261 agcttacttt gccactgctg atctcatcta gcacactttc catctgtttt gtaaattcgc
     4321 tttgcgtaat ccagtcatca tcttgtttta tattctctat gaattttata cccttatttg
     4381 tagctacgat gttattattc ttgcctttgg tctcgatagt tacatattct cgctttaaaa
     4441 gagttggtaa aaatgtagcg tatgtgctcg gtcttccgat accctctttc tctaaaagag
     4501 agatgaagtt actctctttg tagtgctgtg gcggttgttt tttgacttct tgcagctcaa
     4561 agcccattag ctcaacttcg tcgccttgct ttaaatttag gctaatttct agtatttcct
     4621 tatctttgtc ttcatcatct tctatttctt cttttaaagc tcctttaaag cccttgtaaa
     4681 tgcatttact ggtctttgtc ttaaaactaa gggtttttat gtcgatgtcg tatatagtgt
     4741 tttcatttat ggcatttttg gcttgagact ggatagagtt taaataaatt agctcataaa
     4801 gtcttttatc atcatcggta agtgccattt catcaatact tataaaatta tgcacgtgcg
     4861 tgatgcggat agcttcgtga gcttcagctt gactttgcgc tccagcttta tactcccttt
     4921 tttcatacca ctcttcgtct ccaaatttag cacccacctc atctataaac tcatttgata
     4981 agctattgct gtcggttcta tggtaagtaa tcaaaccttt ctcaaatagc ttttgagcga
     5041 tactcattgt cttatcaggg ctaaatagta gctttttgtt ggcgatctct tggagttggc
     5101 ttgttctaaa tggtagtttt ggctttattt gtgtctcttt ggtgtcaatt tgataaactt
     5161 ttgcgttaaa gccatttaag tctgaaattt tagcatttgc ttcgtctttg cttacaaaaa
     5221 tattatcgtt taacgcatta aattctatac catctctagt tcttagtttt gctttgattt
     5281 tataatcaat ctttgcattt gccttgtttt cattgaatgc cttaatctca agctctcgct
     5341 taacgattag ggcaagagct ggagtttgga ctcgtccaac gcttatattt ttgtcattta
     5401 gcttgttgat ataggttggc gacatgataa agcccaccag cttatcgcct actgctcttg
     5461 ccttaaagct atcaaattct tttaaatttg agcttgcaaa tggcacggca ctttcaagtc
     5521 cttttttgat tccgctttct gtgatttcgt gaaattctgc tctttttacg ctttttgcta
     5581 tatttttaat cgtatcataa accatatagc ctataccata gccttctcgg tctgggtcgg
     5641 ttgctatgat gacgtctttg cctttgcagt cgttaaacat tgcatttatt cggcttttgc
     5701 tttcgccttt aaagtcaaat atcggctcat agctttgata atcggctacg atttggttgg
     5761 ttagctcttt aaaatgccct tttgtggcat aaacctttgc accagtgata tgctctatct
     5821 tgtcgcactt gtttgggctt tctatgatta tgattgtgtt ttgcatagct ctaatccttt
     5881 attttgattt tggtgtttat tccattgttt tgatttttca atcattttaa aaatttcctt
     5941 gattggcgtg cttctgtaaa tgataataga tgttttatca ttaagaataa gcgaggacaa
     6001 catctcttct tgtaattttt tactttgtgc gtatgtgtga actcttctct ccattgtata
     6061 atcttgtttg gcttgttcgt caagctttaa aaagaagtta atactcttat acatgttttt
     6121 gcattttttt atgagttcat ttgttctttg ttcatctctt gggtcacaat agaatttccc
     6181 aagctctata gggctatcgc tgattgctat gtcgtgtttt ttaagcactc ttgtaatgtt
     6241 tagcatttgt cctttggtga cgtatggctg gtctttcagt ttttcttttt gattgttttc
     6301 tatgagttcc gttgcaaatt ccgaaattaa gccaacatct attctttttt ctctcatgta
     6361 tttttttaaa tttttagcta gcgtactttt gccagctcct ggactaccat aaatatttat
     6421 taccaattta ttcattgctt tattctccta cttttatggt gctacgtatc cacccttaaa
     6481 ttttttatat gcttcatacg tttttcctat gccacgtcct atgtcctttg ctacgttggc
     6541 accagctcca atgcttgcgc ttgctatttg tcctgctaca ttagctccgc tagccgcgcc
     6601 taagctactt aatgctccgc ctacaaagct tccaccggtt gcttttctag ccagcccacc
     6661 aagtagcgtc ttgctagcta ccgctccagc tactacaccg cctacaactc cgccacttcc
     6721 gctttccatc tgagttccaa gcacggcgtt aatccagctt ggtatttttt tgagtaaaaa
     6781 tagcgcactt atgcatgtaa tggaaccggt gattaaatat tcaaattgtt taacaaacaa
     6841 ctcacttata tagttttgat agttttcaag ctctaggatc ggatttattg ctaaatttaa
     6901 agctataaac gccaaagggg cgataattgc gtatgataaa tataatttat accaactcca
     6961 taaatatggt aaaaatcttg gaattattaa aaatgggatt acaagtggta gtgtgcttaa
     7021 aattaaaaat gccataaatt tgctaaaaaa tattacaatt gtaatgccta ctaaaagcaa
     7081 aaagaatact atgtaaaata tccaaaatgg gatcatagaa agtgccgtta taattccagc
     7141 ccccaaataa tccattacac cattaaaact aattccaaga aatgaccacg cttgcgtttt
     7201 tagatattct gtagttccgt aattccacat caacgctctt atattatcaa ctctatttgc
     7261 tgattctgtt acgattgcac caaaatccct accttcaaaa attgagctta aaattgtgat
     7321 tattacattc tctgggatgg ttaacgcata taaaacacct tgatatgcgt caaatgagct
     7381 taaaatggca aaaataaagc atagctgaat tatatatttg acagctacaa aaatttcatt
     7441 tcttgttgga tacccatttt ttaacctatt taacagccat aatgaaacta tcaaaatcac
     7501 gatggttgtc gtggcggttg aatagactag atcatgtgct ccttgataaa atttttcaaa
     7561 taggctcatt acgttttctt gtataatgtt ttgggtttta tttatccagt tgctgtcagt
     7621 tagcaaatct tttgccactt gtgtttgtgc cattttttat atccttgttt tgtcttttaa
     7681 gcttaaaaac tttttttatt tctacattct tgtaatatct tttttatata ttttcgttgt
     7741 tattagtgtt ttaccattat ttaacggttc tgtagttttt atcttttgaa tttctatttt
     7801 cttgccgtct tttataactg tttctgttgt tgtttcttct ttaaaatctg gactttgcat
     7861 ttctactata tattcttgca tttcaacatt ttcttttata tctgtattat ccgtatgtag
     7921 ttgcttttta catacagcct tattaaaacc taaaaaattt aaaaattcat tcaacatttt
     7981 ttccctttaa atttggggct ttcgccccat ctaccctaag tttcataagt gacctactta
     8041 tcgctccata cccttatttt gctcttttgt ttgagctttt tgctttgtca tttcgacttt
     8101 cacagctggg ttgtagtaat ctactccttt aatttgagct agcgttagat tgtctagttg
     8161 cttttctaaa tttccactaa ttcccaaagt tttgccgtag cttattttta cttcaaaatc
     8221 ttggtttttg gattgctctc ggtagtgcgt gacagccgtt aggtctcgat ctttaatttt
     8281 gctctcatca agtccgtcaa actgactcac gtgataaagt gtttttgttt ctaatcttgg
     8341 cttgattgga attttttcct ttactacata tgtcataggt tgtccagttt cttgatcata
     8401 cttaacattg ccgtctttat cctttactac agccgtgacc tctttgccgt ctttgtctag
     8461 cttaggtctt aactcatggt ctgcgatata gagcatctta acgccatcaa cccttgcatc
     8521 tttgccgttt ttggtcttta ctacttcgcc agtttgctcg tcatgtttta gctttaatac
     8581 tccgcccata gcgtttcctt gctccatcgt tacaaactga gctttgtcgt aaccttttat
     8641 tgccatttcg gctcttaaga gcatattcgt ttctcttgag tacgtattgc ctgttttagc
     8701 gttgtatggc attgtattat ctacttcttc cttgctcata tctttttgcc agtcagcttt
     8761 accggttttg tgagcttcaa aaagcttaaa tttcatatac ttatcaaagc tctctttttt
     8821 ctcggcattg tccatctgtt cccagctttt tcttacttgt tccatctctt gtcctttaca
     8881 tctgttaaat actcataact tttgggctat gagctagtgt tgggctaatt tttatcagtt
     8941 gagccaattt cttggtgcgc ttgctttaga tattcaagcc ctttgcactc gctgtcactg
     9001 atttcaaact ctccatcttc gctttgggca aattgttctg ctaggtgttt ttcatactct
     9061 ttgtatgctt tttcttgctc tagcttctct tggtaagtca tttttactcc ttagggcaaa
     9121 ttttagagtt ttttaggctc taacttaaat tttaattcgg cattaaaatt tagattaaag
     9181 cctttaaaaa catatgaaat aattatattt ttacgtataa tttaaatata acttacatat
     9241 aattttatat atatttttaa tataatttac gtataaaatc ataatttttt actccctatc
     9301 aacttttatt tttaatgctt ttaatagttc atctctttgt tgtttatcca tatccgccac
     9361 ttccaccttt gactcatttg tcttttggct attttgctgt gcggttgctg gtgaattttg
     9421 caatatattt gtgtcttgtg gcttatgtgt gtttgtttgc tctttttgtg ctattgcttt
     9481 aacttctatc tcattagccc ctttaaattg tactatttta aaccagtatg gtactttggc
     9541 tttgattggc attttgaaaa atttacttac taagatataa atatcattgc tatcttgatt
     9601 ttttaaatct tgagctgtta ctagtctttt ggcttccttg ctttttgata tattgctttt
     9661 gaatagatcc atattgcctt gtgatttgct gatttttata tttgtataat cacctattag
     9721 ttcgcttgta tcttttgcat ccttttctga gttcattcca aaaattacat gatatccgct
     9781 attgtttttc acaatattca tatcatcttc gccgtaatat tttttgattt gctcataagc
     9841 ttgtgttacg aataccggta aaagtccata acttcgacat aatgctggtg cttctagcaa
     9901 aaatggcatt tttccaaagc gaacaaactc gtctaaaaag caatatatga atttgtctgg
     9961 atctgagttt tcttttccac tcattagctt tttaaatagt gtttctatga aaattctaat
    10021 taatggggct aaaatttcca tatcttcggt ttgaataact acatacatac tgatgcgttt
    10081 ttctcttaaa tcttcaaagg caaaactcat tttgcttgtt gcacttgcaa cttgtggatg
    10141 tgagaatact ttcataaacg tgtcgtaggt tgattttata ctcgcaaact cgttttcggc
    10201 agcttttgcg taagctcttg cttgattgcg agtgctttca tcgatgcttg tatcatttgc
    10261 ggtttgtttt agccaaattt taaaggtatc aacatcataa tctcgctctc ttggtgcttc
    10321 aggattatct tcgtcgattt ctttcatggc ttcttcgcca aacttctcat ctaaataatc
    10381 aaaataatca gcttttggag cttgtgctag ttctcctaat gtagtgtgtt tgtttttttg
    10441 catgaagtat tcggcaaaaa atacaaaaag cgtttttgct gataataccc agtgatcatt
    10501 ttctttctct ttttcagcta caaagattgt atttgcgatt tggtcggcta gttttttaat
    10561 acgaatatac tccatgtctt ttacgattga ataatcaaaa ggattaaaaa atagcgtatt
    10621 atcccagcta aaaggggaga atagttggat ttcgttttta aaatattttt gacgatatcc
    10681 agctgtcttt tgatataatt cgcctttaat atctaatgtt actgatgagt ttggaatact
    10741 aagcaaattt ggaataatca taccagccgt tttaccgctt ccaggaggtg caactacgag
    10801 agttgcgagt ggtcgagtag ctcttaaaaa tttaggattt tcgctatcaa tatttagaca
    10861 gcctagcact agcccatttt tgtagttaat gctcattttt ttaaagtcat ctggtgtggc
    10921 aaatctagcc gagccgtaat tttcattatc gctaaaatat ggcattaacc accacgcaac
    10981 gactactaaa aacggagcaa ccagtgcaaa aagtgcgaca taagctttta attttaacat
    11041 cggagagccg atgttattta gaattttaat ggctactgct gggacattta ctagatccgg
    11101 attaaaaata acctttacca ttgccaagta cgctaatacg cccattatta acgatgatat
    11161 aaatataatt atccattttt tggtgctaaa tttctgcgta tcatccattt tctttccttt
    11221 ttatttcgta ttcttccatt ctatctcgtt cttttatatt gcttggagtt tttatgtgtg
    11281 gtacatttat cttgattttt agcgtgtcaa ttttttcatt taactctttt ataatttgca
    11341 ttagctttac gatatttttc tcaaagtctg tttttgcttc ttcatggtct gttatatttg
    11401 cgtttagatg gtatgctatt tgatttatat tcgttccgat atggctaaat tcttttaaat
    11461 aaccaccaat tattctattg tttgtttcta tttcttttaa gttatctttg tatttttgtg
    11521 tttggagtag ttttctaaca attgccgatc tgctttgatt ttgtttatct gatagttttc
    11581 ttaggattct atcatcagct tcggttagat atatgtggtg tctcgtcttt ttcatgccac
    11641 aatttttccc atatcttctt ttaaattcaa aatgtcagtt actactcttt tattttttac
    11701 tcttgttatt tggataatat agtcaattgc cgtaattatt aggctatcta tcatgccatc
    11761 atctacattt gacaatccgc cacctagtat gacattggtt tttatagctt ttattgcatc
    11821 tcttgggctg ttggcgtgta gtgtgcttaa atttccagcg tgtccagtat tattaaccct
    11881 taaaaatgag aatgtgtttc taatgtctat ttcacccaaa aataacctat cagggcgtaa
    11941 gcgcatcgca ttatcaattg ctacttgata actgtaaatt tcggttgcta tttttggaac
    12001 tgctagttgt gttttattta tattttctac tcttagctct tggctatctt ctatggttac
    12061 cactctttca tttggatcaa tttcgcccat tagtgaattt aaaaaacttg tctttccgct
    12121 tccagttcca ccacttaaaa ggacgttttt ctttttgtgg attagttctt ttattttgtc
    12181 gtagttccag ccatctttta tacatttatc gcttaaaata aagctttcta gcggatagat
    12241 ttctttactt ggtattctta tgcagattgc tatttcgcta ttaaataggc ttgatttatg
    12301 ctgtgcttga acacgatatc ttaaaaatgg gcttggcagt tcgcacgata gatgacaatg
    12361 gctttcatcg aagcgttgat ttcgcctggt tgccagttca actaaaaagc tatttaaaaa
    12421 tctagcgtct agttttgggt cttgaactat ttcccaatga tcgccgtagt ctatgttgat
    12481 ttcgcaaggc ttattaaaaa taagctcatt tgcatttaaa tttaaatatg gttttaaaac
    12541 gcctaatata ttgtttagta ttatgctctc agccatttta ttcttcttta tcttgctcta
    12601 cttgttttgt tgttacgccg tttgataagt tttgtttttg agctactaaa ttttctagct
    12661 ttgctttctc ttttagatac actgtctctg ctttttcaat cttttttaat tgaatagcta
    12721 ttttttctag cagtttatcg tttgtttttt tgttttgtag ttctgcgttt atttgttctt
    12781 ttattatttc atattccatt aattttcctt ttttaatcat taaaatattg catcaaaact
    12841 tcgccgtttt taggctttgc aaaccacatg tgatttgttg gcactaaaaa tatacgactt
    12901 ccacttcgta tttctatggt cggcttgatt tgcgattgct gttgcattat atcttggact
    12961 atagagctta tgtcgctttt agcatttgaa tacatctctg tagcatattg attgtttgca
    13021 ctgccatttg tattcatctt agaggctata cctagcataa tgccatttgt aatggtgcta
    13081 atactatatg ctataccgta acgttcccag tatttgttat taatcgctcc gatagctcca
    13141 gccataccca tgttgtcggc aactaatgca tctgttagca ttatgttaat gccttgcgga
    13201 gtgataatct ctcgccatct tatttctagc ctttcgtgtc ctattttggt attattcgta
    13261 taaaatccta tggcttttga gccacgtggg atcagcacag ctcgtcccat tgaggcgtat
    13321 atgtcttgtt cgatttgagc ggttactatt ccgcttaaat cagagcttat agctgtggtt
    13381 aaaatagctg gtatcattct accagctcta attgtgcggt ataatctatg ttcgtttgtg
    13441 cttatatcta tgcttttttg attagaaaat ccatcaacgc caaattttga gctgttttga
    13501 ttgacgcttt ttacttcgtt attacgattt gctaaaattt gcgctctaat tagctcttgc
    13561 attcgctttt tataggcttt ttggctatcc attgttatct cttgccttaa ttgctcttgc
    13621 tgtgcttgga gctcttcttg cttttgcttt atgtgttgcg tcatctcttc ttgttcttgc
    13681 tctgcgtatt ggcttggttg gattaaattt ttatccgctg cttgagcttt ttgcttttgg
    13741 tctagctttt caaaatcttt tagaatttgt gttaaattct gatcttgatt tggctctcgc
    13801 tttccagctt tatagatata gtcatcaact gggaatttag aattttcaaa aagatgactt
    13861 aaatcagctt gattttgcaa atttcttatt tgcctatcta acttactttt gttgccatta
    13921 tctaaattta aaaccgcttc ttgattgtta gcaaaaaggg gagtagatag aatactgatt
    13981 gtcgctaggc ttaaaaatag ttttttattc ccctttttca ttttaaattc cttttgcttc
    14041 ttttatggct ttgttatgct ctttttgtct ttgttttatt gcttctttat ccgtgtttaa
    14101 attaactttt ttctctacac aaacataact ttcaccactt tttatgctga attttggact
    14161 tatggtttca gcgataatat aatcgcctat tattcttgtt tccactgggc tatcttgtct
    14221 atctataact gcaaatattg caggaatttg aggcattttt tcttttgagt atttaaaata
    14281 tgtaaatttt ttatcgctaa atatctcttg tgcgacaagc cattcatttt ctttgagagc
    14341 tttttggata aaatctctat taatatcgtt tttattgatt ttgagttcag ctattccatc
    14401 cttaattatc aaatattgag aatcatcaat tttattttct tctattactt tttttgtttc
    14461 atcatcttga atgtatataa gaaaacttgg gtcttttgaa tttttataat ctgttgaaaa
    14521 tatataaaaa gtatggattt taccatcgcc tgtaaaaatt gtaaggcttg tatcaattcc
    14581 tattaattgt ggaatgattg ctattgcatt tgctttactt gggatttgtt caattttaaa
    14641 gccggtttga tcaccaagta caaagttatc tatattacta tcaaatatca gggttgttgc
    14701 cattgcatgg cgtgttctaa ttttatgtgt tttatttggt gtatatttga tggtttgggt
    14761 attttcatat ccgctatatt tttttgaatg gaatttattt tgcaatgcct ttaaatcttg
    14821 gttgcggatc gcattttgca taagctcgag ttcttctttg cttaattctt gcggttgctc
    14881 cattgttatc atattttgat tttgcattgc tggatgattg ccgttgttaa attttggcat
    14941 ttggacttga tcgccttgtc catacattcc aagtggattt actttaaaat ttgattgaaa
    15001 ttggttattt atatccttgt ttttgtcatt aaaaatattt tcgcccatag acagatcttg
    15061 tcgttcattg actagttctt gtgtttgacg cataattgca cgcacttcat tcatctgagc
    15121 ttcactgagt cctgcttgct gggcatttaa atttaaggca attagtgtta tcaacgatat
    15181 ttttattaaa tttttcattt tttgcctttt tcatctaata tttgtgttac ttgatattta
    15241 tcaactataa agccagtcgg atttttcaat gtatcgacgt agttactact ttgatttcta
    15301 aagtcgtact caattgcgct tctatatttt ttatagctca cttctgtgcg ggttggattt
    15361 gtaatttctg cttgaaagtc aattgtggca acattttggc ttaaaattgc tacgttgatg
    15421 attttaatat ctctgtagta atttttggtt gtataaatcg aatttggatc gcttactaaa
    15481 ttttgaaaag cttcccatac ctgtctgctg ctttgagttc ttatctcatt atatcgctgt
    15541 gcatcatcaa tgcgatttat taattcccta ttctttacat atccagctaa tatacttttt
    15601 agtagctctt cattattgcg aacgtttaga tttgtatcat ctatggttac aaaccttgag
    15661 tcgccatctg aaaatttaag caacactggc tttgtctctt taagtggcgt taatagtgct
    15721 atagccactg ataggcttat gcttactagt gcaagtgcta gtattacata cagcatatat
    15781 gctttaatgt ttcgctccgt cttaaaaata aaatttggat caaacttttt atcttcgtat
    15841 ggcatgtttt atcctacttg tataaagtca taacaagcgc aagggcttac tttttctatc
    15901 ttgcttggtt tatcagcaca tccgcttaaa aaaaccattg cgattattgt tacaatcagg
    15961 attttcttca tttctagctc cttcgttgtt ctttgtattc taggtaatat tttcgccagt
    16021 gaactggact atctgctttt aattttttca ttagtattac gttgtcgcta cttgatgaga
    16081 atactcttaa ataatttccc aagcttgata tatctaaatt tagcttagca ctttcgtttc
    16141 gcagtttcat ttttagtaga acttgtcttg cgtttgattg agtttctttt aaaaattttg
    16201 cttcagttgg tgttaaacct attgtgtcgc ttaattcttt caatgtttct tcactgtttg
    16261 ttgggaatat gataaaattt gctatgttat ctaaaaatga tgagccacgc tcattgccgt
    16321 taaataagct aatgctttga aagccaaaac acccaactcc gccgatttta cgccactcca
    16381 aaataccttc tagtattttt tctgacatta cttcatctcg tagataatct tttaactcat
    16441 ctataaagca aaaaaatcca cgtttatctt gactattttt ggcttgattt tttaacctat
    16501 gaaatacata catagccgtg agtgctgata tttttttgtt ttgtaaaacg ccatccatgt
    16561 ttaaaactga tagttgtttt gtgaaattta gggcatcttc tttgttgtca aatattgagt
    16621 ctttgtaatt tccaaacctt gtttttagct ttgattcatt atctgctggt aggctatcta
    16681 tgaaatcgct tagcgatatt atttgatctg cttgcttatt atcataaagt ctgtttatgg
    16741 tctctcttat gtcttttgtg gcttcatgct cttctacttt aatttctgcc attgagccta
    16801 gccaagatgt taaaaattct ctattttcta ttgtgtcggc tagactgaat ggatttaatt
    16861 taaatccatc gctttcgcta tcgtggtatt cgccatccat gtagtttgta aaattataca
    16921 taccacgaag tttgtcaagc gcgaatatgt ttattttata cttaaataaa tttgccatta
    16981 aaaattggat tgtagttgtc tttccgcttc cagttccacc cataatcatc gtgtgtccag
    17041 ctgggcgatc accatcaggt tgccaatgaa aattaaaaag atatggggtt ccattaaggt
    17101 gtctaaatgt tgttactgct tcatcgcccc agtcattctt attaaaccca gttacttcgt
    17161 tttcaaaatt cgctattgtg gctagattgc ttatatttag agtcttcttt cttgcattta
    17221 aatttccacg act
//
LOCUS       DAPPKW010000032        17118 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.032, whole genome shotgun sequence.
ACCESSION   DAPPKW010000032 DAPPKW010000000
VERSION     DAPPKW010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 17118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17118
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.032"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            623..2068
                     /locus_tag="RPW04_000960"
     CDS             623..2068
                     /locus_tag="RPW04_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase subunit A"
                     /protein_id="HDX6295056.1"
                     /translation="MIHKILIANRGEIAVRIVRACKDLHIKNVAIYTEPDRECLHVKV
                     ADEAYQIGKDPIKGYLDSKRIVEVAKACGADAIHPGYGFLSENYEFSKEVEDAGLIFI
                     GPNSDIIRKMGNKNIARFLMKKNGIPVVPGTEKLNSETIEAIKNYAVRIGYPVILKAS
                     GGGGGRGIRVVWKEDELESSYESCKREAKAFFNNDEVFMEKYIEKPRHIEFQILGDNY
                     GNLIHLCERDCSIQRRHQKVIEIAPCPTISEDLRKRMGVAAVAAAKAVGYTNAGTIEF
                     LLDDYNNFYFMEMNTRIQVEHGVTEEITGVDLISRQIRIAAGEILDIEQNEVRPQGVS
                     IEARITAENVWKNFAPSPGRITGYFPALGPGVRVDSHMYQDYVIPPFYDSLVAKLIVK
                     GTSYDLAVSKLERALDEFKIEGVRTTLPFLLAISKRRHFRRGFFDTSYIEERLQDILE
                     NTQDHHQENKEEVIAAIAAAIKKVKEDRAKE"
     gene            2075..2311
                     /locus_tag="RPW04_000961"
     CDS             2075..2311
                     /locus_tag="RPW04_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295057.1"
                     /translation="MNDFFDSLKNIKNELVKEQKSQEIKVPKKPKPNPNRDEFKDIFA
                     EPNEIEMPDAKEHRLKDEFLEFIKHSDVKKLERD"
     gene            2298..3014
                     /locus_tag="RPW04_000962"
     CDS             2298..3014
                     /locus_tag="RPW04_000962"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HDX6295058.1"
                     /translation="MREIDFCTLDTLCPYLEDRNSRTMYRYVSQCSFDYNSNLVKHGY
                     RRFGSYFSKPICDGCDECKSIRIDAFNFKFTKSHRRIINKNSNTKIVVSKPYISQRHI
                     DLYEKYHKFMHEKRGWEYYNLDFRRYYSVYVEGAGDFGYEIDYFVNDELVCVDLVDIV
                     DDGISSIYCYWDIDFAHLSLGKFSLLNQITIALKNDLRWIYLGFYVKDCASLAYKGEY
                     KPYETLKTYCDIDEKPIWEF"
     gene            3071..3895
                     /locus_tag="RPW04_000963"
     CDS             3071..3895
                     /locus_tag="RPW04_000963"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF006502.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDX6295059.1"
                     /translation="MQITQTLESITITTDDCDLFLNLSNKIRQSFANAIGNRDKVIIF
                     YNENELVQRKYFLKLIGKIYANSVGKGIDFLLTHHKNIKLVYKKPNSLQILINVDVKF
                     ENSRVVLDLKNSEELFTKYLIRGLGDTRHEYFESKNILVISPKTTEDVELLDNILNFR
                     EHLKYIVNFNYDKKAYDEFKKRAKILTSKAYIRRFSMLANLLEEHFETLGCKATDDFE
                     TVRTNYLNLTKVYHPDKHAGKPNEVQKSYIDKFQKIGLAYEALKPYFKEQKSFISA"
     gene            3940..4713
                     /locus_tag="RPW04_000964"
     CDS             3940..4713
                     /locus_tag="RPW04_000964"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002856096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HDX6295060.1"
                     /translation="MKLGVNIDHVAVLREARAVNDPQIIHAMFEAVSGGADQITIHLR
                     EDRRHINEDDVKNIINLSPIPVNLECSINSEIIDIVCELKPHRATIVPEKREELTTEG
                     GLSLDSLNLKNVISKLNDNDIKVSLFINPKKNDVIMSKELGATCVELHTGAYANTFLM
                     LNSNLNHTKYKIDNLNLKRGELEILLNSELTRIKEAANISTNLGLEVAAGHGLNYQNV
                     TAISSIKDIFELNIGQSIVAKSVFVGLKNAVKEMMELVK"
     gene            4710..5633
                     /gene="pdxA"
                     /locus_tag="RPW04_000965"
     CDS             4710..5633
                     /gene="pdxA"
                     /locus_tag="RPW04_000965"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase"
                     /protein_id="HDX6295061.1"
                     /translation="MSLPKIAISVGDINGVGIEIALKSHDEIKNICSPIYFINNELLN
                     SAANILKFTVPNDFEIFECGSSFNIKPGRVSKKSGKFSFVSFENAILYTQNKRAQALV
                     TMPINKESWKKAGVPYVGHTDALGKYFGKNAIMMLGCEELFVALYTDHLALKDVSAKI
                     KAKNLALFLVDFYNSSKFENIGVLGFNPHASDNETIGGKEEKEIIKAIKSANNRLKKE
                     VFTGPLVSDAAFTKSSLKRCNRLVSMYHDVGLAPLKALYFDKSINVSLNLPIVRTSVD
                     HGTAFDIAYKGKAETKSYIEAIKFAIKLCDY"
     gene            5768..7249
                     /locus_tag="RPW04_000966"
     CDS             5768..7249
                     /locus_tag="RPW04_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HDX6295062.1"
                     /translation="MWGYNYIPSNHLLLFILASIFGLFMAFNIGGNDVANSFGTSVGA
                     KTLTLKQALIIAAVFELSGAVFAGAEVTNTIRSGIVSLPRGDVNPMVFVIIMISALFS
                     SGAWLFIATKKGLPVSTTHSIVGGIVGAGMMMGFIYYNGSKTFDMVQWGEIGRIALSW
                     VISPVMGGVMAYLIFGYIKSKIIIPSSRIQSEIKSLKRARKTYKDQYIKELSNKSEAE
                     QIKELRRIAIIDEDECEGENCDFRDKIKAMKEQEKNIDGMVFMRTHIPMVAGVAAMII
                     AGSMLFKGLKHMDFNLSIIQTIWIIFVIGIAAYLASFAIVNLMKKDNPQKGINRIFGW
                     FQIFTASSFAFSHGANDIANAVGPFAAILDVLKNNTINETTPIPGIAMATFGIALVVG
                     LWFLGKEVIATVGTKLAEILPTTGFSAELAASIVILIATKMGLPISSTHVLIGAVLGI
                     GVYNRNANWGMLKPIGLAWIITLPISMIGSAIGFLVIKNIMGL"
     gene            7321..10164
                     /locus_tag="RPW04_000967"
     CDS             7321..10164
                     /locus_tag="RPW04_000967"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012874.1,HMM:NF012903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295063.1"
                     /translation="MRITNQLINFNNLSNYQASAKSIYDINQRYDSGLKIQNSYDNSS
                     IYVDGTRLEYEINLLDQVKQTSTKATEFSKNSDKALNDFVSKLTEFKTKLIQAGNDIH
                     NETSRNAIANDLEGLKKHLIDIANSSINGQFLFSGTALDTKPIDSAGNYHGNNQLINA
                     AIGANQTTAYNIDGQTLFLGKDNDYKKILTTNVSLIDNKTKLTSDATNYLNAANKILD
                     LIGGNYRSEELVAQIGKMNPELDFADPAALADTTFYMQGRKPNGETFSTKFKVTADSS
                     IQNLLDNIGYALGNDKNGKNNVVSVAINNSGQIEVTDLKSGNQMTELHLFGLTDVRGP
                     ETFKVGDRDIVIDPATHTDFRVTTEKRTVGGVSTDVLIVDSVNPAGNKYEITQVAGGD
                     LSIQQVDKTTGANIGAATNVTPVAGKLVLNPADLTGGITAADFRAYDPANIEALSDRG
                     ARDENGNWVSSANLTDTKTITQNVEKGNVYLTEFIKSGFEDVLGNKSDAIDYNKLQFE
                     KTDNKLSSNVSQVIKGTNEYATNSTKLSAVAGQALQANPNSNITMNIKSKDGTNYEVK
                     LNFTDTNSNTTERYPTITVTPLDDNWEKPATATPVYYGNVYSGKYNEATKTTDGVITP
                     ADDMTYQQLNDIVSMVAAGNLPSGQPNTNVIANIDTASRNTYADANALKTALKNGVTD
                     VQAQGIIDRVVDASGIAYPIDFTANGNALRDIKDAILGDQDYVTSRYNEYNTAIKSAS
                     STINTTLDYRGNMVVTDKTASKTDIEVTLFEDRGRGNIEFTDMYKRDAAGNIELDAAG
                     NRIIDTYQSTTGSLFSFTSNNAIAIDEPSVDIFKDLDDMIQSVRDGSYRGDPDASDPR
                     TTGIQGALKKIDHLMDHINKQHTQIGSYTNSLTATGDRATILKVNVSSVKSEIMEADI
                     GETYLMFQQRLMAYQAMLQATAKTSQISLLNYI"
     gene            10226..12373
                     /locus_tag="RPW04_000968"
     CDS             10226..12373
                     /locus_tag="RPW04_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012856758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HDX6295064.1"
                     /translation="MLIISVCILIFFGVATIVPNASFVGTFGNILGSFNYKLFGFLAY
                     IYPFLLLYPAILNYKNFKKFNIKLLGNIIGALLLFFAILLLISMFDKSYGGAIGTFCI
                     EALRSVIGSVGSAVFILMIFFISFGLVFDDRLDIVLKKAFVDRVSASDNLNLKAHYIP
                     KKQKNDVKKIEVDLAINSKIIDDKLEIKNDVSSLEPTENIIDIKEANSLKDDNNTNPM
                     TTIGGVEILNEVAENRELLNQIEKGKVEKPKDFKLPPLSFLNDPPKRSKNINESEIDQ
                     KIADLLDKLRRFKIDGDVVRTYSGPVVTTFEFKPAAHVKVSKILTLQDDLAMALKAQT
                     IRIQAPIPGKDVVGIEIPNKNIETIYLKEILESDIYKNAKSELTLALGKDIVGDPFIT
                     DLKKLPHLLIAGTTGSGKSVGINAMLLSLLYRNSPKTLRLIMIDPKMLEFSMYNDIPH
                     LLTPVITEPKKAISVLSNLVAEMERRYKIMSETKTKNIETYNEKIKKDGGETLPFIVV
                     IIDELADLMMTSGKEVEFHIGRLAQMARASGIHLIVATQRPSVDVVTGLIKANLPSRI
                     SYRVGQKIDSKVILDQMGAESLLGRGDMLFTPPGSPGIVRLHAPFASEKEIEEIVDFL
                     KEQQDVVYEESFLKDESSAVGSSENGLNTGETDELYEEAKSIILSEEKTSISYLQRRL
                     KIGYNRAASIIEQLEIAGVLTPVNAKGQRDIIR"
     gene            12440..12703
                     /locus_tag="RPW04_000969"
     CDS             12440..12703
                     /locus_tag="RPW04_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2018 family protein"
                     /protein_id="HDX6295065.1"
                     /translation="MSFEDDIFGGDPKDKFFDIIFNANRNLVENELEKVLIELAILRE
                     LAEQKGISDMDIKSFEALNTDVVQDGLNDIYIGVTGEILSQNE"
     gene            12696..13121
                     /locus_tag="RPW04_000970"
     CDS             12696..13121
                     /locus_tag="RPW04_000970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295066.1"
                     /translation="MSKISLFLIIGIFLNLNAAAPKFEYVKQFELKKDEKAWIIYTDR
                     KDGTKDIFEFSWTLYDNTNMVLHTKFRNYPRQIMLSLRRGLELYKQIILANTRLEKQD
                     EVALYLEFAEFKKGIAVFKAYTYDNAKRIEVEYKPDKGD"
     gene            13122..14006
                     /locus_tag="RPW04_000971"
     CDS             13122..14006
                     /locus_tag="RPW04_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002864642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HDX6295067.1"
                     /translation="MERIDDILKEFVDSLNYPLASEMFSQVSSGKKLRSKLILKIAGA
                     SEASFKLSSVVEIIHLASLLHDDVIDDSLIRRGKPSINAIFGTKNSIMLGDILYSKGF
                     NEIVKFDMKIADIISDAVCKLSIGELMDVELGSSFNADKEKYLKMIYFKTAVLIEAAA
                     KSAAILAGFDEQKYGDYGKNLGLAFQIVDDILDITSDEKTLGKPAMNDFKEGKTTLPY
                     IYLYEKLENEDKAILKNLFKKELDDNEILWIKSKFKEFDIINLSIKKAKDFGAKAIES
                     SQNTELKMIVSSMIDRDF"
     gene            14006..15274
                     /locus_tag="RPW04_000972"
     CDS             14006..15274
                     /locus_tag="RPW04_000972"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDX6295068.1"
                     /translation="MHYVSISFTHKNTDIGVREKLSFSDNNRRREILRLIGANDSIAE
                     SMALSTCNRVEIFAYVLDTQSSIRHILNSISILTLVPFEALELRADIYEDQGAIHHLF
                     AVASSLDSLVVGETQIAGQLKEAFKFAYDNEDCGVNISSAMHFAFKCAAEVRALTTIS
                     KNPVSVSSVAVAKAKEIYGNIGGMSAVVIGAGEMSRLAAQHLINAEVNVIIINRDEIK
                     AQTLAKELGELASYASFDKLSEYINRYRLIFSATGAPNAIITNEIIEQKDFHRYFFDI
                     AVPRDIDIEEDEYIHVYAVDDLEEIVRTNLALREEQASIAYSIVGKSTTSFFKWRLSE
                     GSTPAIKALRLKAKDIACKEIEKAVKKGYLKCSDQDEASKLVHQVFKAFLHTPSVRLK
                     EKNSDDILKALEYLFDIKIQKDENLEGNLK"
     gene            15271..16974
                     /locus_tag="RPW04_000973"
     CDS             15271..16974
                     /locus_tag="RPW04_000973"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDX6295069.1"
                     /translation="MKFTKLYVPTTKEAPKDATLPSHQFLIRAGFVAQIGSGLYNFLP
                     LGKRVLRKVENIVRDEMDKAGANEVALSFVVPGELWKQSRRYFKFGKELLRLKDRKDN
                     DFLLAPTHEESIVDLVRDKVTSYKQLPLHLYQIGLKFRDEARPRFGLLRCREFIMKDG
                     YSFHASEADLKREFDLMETTYTKIFSRLGLNFRAVEADSGAIGGSGSKEFMVLAKNGE
                     DDILISDASNYAANIEAAKRAKRVCKAERPQSNSMQKFFTPGCSSIAKVTEFFKVDPF
                     YTIKAVMKKAIYEDSEKIVVFFVRGDDELQEVKACNACSALELSDASEEEVIAAGLVP
                     GYCGPVGLHENIDFYIDNELENEKEMICGANEKDYHAIGVNIINFNKDRFKDLAEVKA
                     GDKALDGGVLSVTKGIEVGHIFQLGVRYSETMGATFLDENGKSKPFFMGCYGIGVSRL
                     VAVMVEASHDEKGCIWKKECAPFMVHIIVSNIKDTEQMQFALNLESNLESSGVEVLLD
                     DRNERFGVKMADFELIGVPFGVVVGKGLQNAEVEFIKRDGLEKVKVSSDEILGKLKEI
                     I"
     gene            16971..>17118
                     /locus_tag="RPW04_000974"
     CDS             16971..>17118
                     /locus_tag="RPW04_000974"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HDX6295070.1"
                     /translation="MIKISLFPYFVIEIVCVFIYIINYGFLNFLGEVFLSGIIGIILI
                     FSYGF"
BASE COUNT         6132 a         2383 c         3372 g         5231 t
ORIGIN      
        1 gccattacga aaatagctag agttatcaaa aaaataatcc aaagaaattt tttaatatct
       61 tccatttcaa tatccttttt tatcattata ccacatttta ggctaaaaaa tggcaaatga
      121 tgatttaaaa atataattgt gtaaatgacg gtaattagca tcactactat tttaaattta
      181 tatatcataa atagtatttc acaataatat cttatatatt ttattgacaa ttgccgtgct
      241 taaatgattg aatattttaa aggtacttaa cgtacaaact tgtttgctaa tgacaatttt
      301 tgtgttgaaa tatgctcgct actgctagtt caaaatatat aattattaaa ttttgaatag
      361 cagttttgca gcatcatttt atgtttttga gtattttcat aaatttgaaa gagctgttat
      421 aaacagtaat tctaaaacaa acggctcaag atactaatta actaaaatta tattttttat
      481 atctttggtc tgatataaaa tattatataa attacttgca gtaacaataa agcaattttt
      541 aattccaaat aatagaaatt tttagctaaa cgtaatgaaa tttagctatc attatacgaa
      601 agatttttac aaaggtgagt tgatgataca taagattcta atagccaacc gtggcgagat
      661 cgctgtgcgt atagttaggg catgtaaaga tttgcatatt aaaaatgttg cgatttatac
      721 agaaccagat cgtgagtgct tgcatgtaaa agtggctgat gaagcatatc agataggcaa
      781 agatcctata aaaggttatc tggattctaa aaggatagtc gaagtagcca aagcatgcgg
      841 cgcagacgct atacatcctg gatatggatt tttaagcgaa aattatgaat tttcaaaaga
      901 agtagaagac gcaggactta tatttatagg accgaactca gatattatac gtaaaatggg
      961 aaataaaaat atagctagat ttttgatgaa gaaaaacggt attccagtgg ttcctggtac
     1021 tgagaaatta aatagcgaaa ctatcgaagc tatcaaaaat tacgccgtta gaataggcta
     1081 cccggttata ctaaaagcaa gcggcggagg cggtggacgc ggaattcgtg ttgtatggaa
     1141 agaagatgag ttagaaagta gctacgaaag ctgcaaaaga gaagctaagg cttttttcaa
     1201 taacgatgaa gttttcatgg aaaaatatat cgaaaaacca cgccatatcg agtttcaaat
     1261 tttaggtgat aattatggaa atttaattca tctttgcgaa agagactgtt ctattcagcg
     1321 tcgtcaccaa aaagttatcg agatagctcc ttgcccaact attagcgaag acttaagaaa
     1381 aagaatggga gtcgcagcag tcgcagcagc aaaagccgtt ggatatacaa acgccggcac
     1441 tatcgagttt ttattagatg attataacaa cttttatttt atggaaatga atactcgtat
     1501 ccaagttgaa cacggtgtta ccgaggagat aaccggagtt gatcttataa gtcgtcagat
     1561 aagaatcgct gctggagaga tactagatat cgaacaaaac gaagtaagac ctcaaggagt
     1621 atcgatagaa gctagaatta ccgctgaaaa tgtttggaag aactttgcgc cgagtccggg
     1681 aagaatcacc ggatattttc cggctttagg tcctggagta agagttgata gtcatatgta
     1741 tcaagactat gttattccgc ctttttatga ttcgttagta gcaaaactga tagtaaaagg
     1801 tacaagttat gatctagccg taagtaagct agagcgtgct ttggatgagt ttaaaataga
     1861 aggagttaga acaactcttc cttttttatt agctatttca aaacgacgtc attttagacg
     1921 tggatttttt gatactagct atatcgaaga gcgccttcaa gatattttgg aaaatactca
     1981 agatcatcat caagaaaata aagaagaggt aatagccgcc atcgccgcag ctattaaaaa
     2041 agtaaaagaa gatagagcta aggagtagac caaagtgaat gattttttcg atagtttaaa
     2101 aaatattaaa aacgagcttg taaaagagca aaaaagtcaa gagattaaag ttcctaaaaa
     2161 accaaaacca aatccaaata gagatgaatt taaagatatt tttgctgaac caaacgagat
     2221 agaaatgcct gatgcaaaag agcatagatt aaaagatgag tttttagagt ttataaagca
     2281 ctcggacgta aaaaagcttg agagagattg atttttgtac tttagataca ctttgcccat
     2341 atctagaaga cagaaactca aggactatgt atagatatgt ttcacagtgt agttttgatt
     2401 ataattcaaa tttagtaaag catggatata gacggtttgg aagctatttt tccaaaccga
     2461 tttgcgatgg ttgcgatgaa tgtaaaagca tacgtataga tgcatttaat ttcaaattta
     2521 caaaaagcca cagacgcata atcaataaaa actccaacac gaaaatagta gtttcaaagc
     2581 cgtatatcag ccaaaggcat attgatttat atgaaaaata tcataaattt atgcatgaaa
     2641 agcgaggctg ggagtattat aaccttgatt ttagacgtta ttatagtgta tatgtagaag
     2701 gagccggaga ttttggatat gagattgact attttgttaa tgatgagctt gtgtgcgttg
     2761 atcttgtaga tatcgtagat gatggaataa gctctattta ctgttactgg gatattgatt
     2821 ttgcccatct tagcttaggt aaattttcgc ttttaaatca aataacaata gctctgaaaa
     2881 atgatttgcg atggatatat ttaggatttt atgtaaaaga ttgtgctagt ttagcttata
     2941 aaggcgaata caaaccatat gaaactttaa aaacatattg tgatatagac gaaaaaccga
     3001 tttgggaatt ttaattggaa cgaactttgc ttaatttttt gcaaatagct aaaatattgt
     3061 gaggtttgat atgcaaatta cccagacttt agaatcaata acgataacaa ccgatgattg
     3121 tgatctattt ttaaatttga gtaataaaat caggcagagt tttgctaatg caataggaaa
     3181 tagggacaaa gttataattt tttataacga aaatgagctt gttcagcgta aatattttct
     3241 aaaacttatc ggaaaaattt acgcaaatag cgttggaaaa ggtatagact ttttgctaac
     3301 gcatcataaa aacataaaac ttgtttataa gaagcccaat tcacttcaaa ttttaataaa
     3361 tgttgatgtt aaatttgaaa atagcagagt cgttcttgat cttaaaaata gcgaagagtt
     3421 atttactaaa tatcttatta ggggtttagg agatactcgc catgagtatt ttgagtcaaa
     3481 aaatatcttg gttatcagtc caaaaacaac cgaagatgtt gagcttttgg ataatatatt
     3541 aaatttcaga gagcatctta agtatattgt aaattttaat tatgataaaa aagcttacga
     3601 tgagtttaaa aaaagagcga aaattttaac ttcaaaagct tatataagaa gattttctat
     3661 gctcgcaaat cttttagaag agcattttga aactcttgga tgtaaggcta cggatgactt
     3721 tgagactgtt aggactaatt atttaaatct tacaaaagtt tatcatccag acaaacatgc
     3781 cggcaaacca aatgaagtac aaaaaagtta tatagacaaa ttccaaaaaa tcggacttgc
     3841 gtacgaagcg ctaaaaccat actttaaaga gcaaaaaagc tttataagtg cttaaataat
     3901 tttgatgtat aatttacact aaatttcaaa ggattatcta tgaaacttgg tgtaaatata
     3961 gatcatgtag ctgttttaag agaagctaga gcggtaaatg atccacaaat tattcatgct
     4021 atgtttgagg ctgtgagcgg cggagccgat cagatcacta tacatttaag agaagatcgt
     4081 cgtcatataa atgaagatga tgttaaaaat attataaatt taagcccgat tccagtaaat
     4141 ttagaatgct cgatcaatag tgagattata gatatcgtgt gcgaattaaa acctcataga
     4201 gcaactatag ttcctgaaaa aagagaagaa ttaacgactg agggaggatt aagtttagac
     4261 tcgttaaatt taaaaaacgt catatcaaaa ttaaatgata acgatattaa ggtttcgctt
     4321 tttataaatc ctaaaaaaaa cgatgtaatc atgtctaaag agcttggagc tacttgcgtg
     4381 gagcttcata ccggagctta tgcaaacacg tttttgatgt taaactcaaa tttaaatcat
     4441 acaaaataca aaattgataa tctaaattta aaaagaggcg agttggaaat actgttaaat
     4501 tcggaattaa caaggataaa agaagctgct aatataagta caaatcttgg tttagaagtt
     4561 gctgcagggc atgggcttaa ttatcaaaat gtgactgcta tatcttctat aaaagatata
     4621 tttgagttaa acataggaca aagcatagtt gcgaaaagtg tttttgtagg gctaaaaaac
     4681 gccgttaaag agatgatgga gcttgtaaaa tgagtttgcc aaagattgca ataagcgtgg
     4741 gcgatataaa cggtgttgga atagaaatag ctctaaaatc tcacgatgag ataaaaaata
     4801 tctgctctcc tatatatttt ataaacaatg aacttttaaa tagcgctgcg aatatactta
     4861 aatttaccgt tcctaatgat tttgagattt ttgaatgcgg cagtagtttt aatataaaac
     4921 cgggtcgcgt gagtaaaaaa agcggcaaat tttcattcgt aagttttgaa aatgctattt
     4981 tatatactca aaataagcgc gcgcaagctc ttgttaccat gcctataaat aaagagtctt
     5041 ggaaaaaagc cggagttcca tatgtcgggc atacggacgc tcttggtaaa tattttggta
     5101 agaatgctat tatgatgctt ggctgcgaag agctgtttgt tgctttatat acggatcatt
     5161 tggccttaaa agatgttagt gctaagataa aagctaagaa tttggctcta tttttggttg
     5221 atttttacaa ctcttctaaa tttgaaaata taggagtttt gggatttaat ccccatgcaa
     5281 gcgataatga aaccataggt ggcaaagaag aaaaagagat aataaaagct ataaagtcgg
     5341 caaataatcg tttaaaaaaa gaggttttta caggaccgct tgtgtcggac gccgcattta
     5401 caaaaagctc tttaaagcga tgtaataggc tagtaagtat gtatcacgac gtaggtcttg
     5461 ctccattaaa agctttgtat tttgataaat ctataaacgt aagcttaaat ttgcccatag
     5521 ttcgtactag tgttgatcac ggtactgctt ttgatatagc gtataaagga aaagccgaaa
     5581 ctaaaagcta tatagaagcc attaaatttg ctataaaatt gtgtgattat tagtttaaat
     5641 ttaagaacaa ataagaacaa agtagttata attataaaaa atcatttgga ggtgtttttt
     5701 gtctaaggat aatagggata atctttttgc actcatattt tttataatat cagttgttgc
     5761 tttttttatg tggggttata attatatacc tagtaatcat cttttacttt ttatattagc
     5821 tagtattttt ggtctattta tggcgtttaa tataggtgga aatgacgttg caaattcatt
     5881 tggtactagc gtaggagcaa agactcttac attaaaacaa gctttgatta tagctgcggt
     5941 atttgagcta agcggagctg tatttgccgg agctgaggtt acaaatacta ttagaagcgg
     6001 tattgtttca ttgccaagag gcgatgtaaa tcctatggtt tttgttatta tcatgatttc
     6061 agcgctattt agttctggtg cgtggctttt tatagctact aaaaaaggac ttccagtatc
     6121 aactactcac tctatagtag gcggcatagt cggtgctggt atgatgatgg gatttatata
     6181 ttacaacggt tctaaaactt tcgatatggt tcagtggggt gaaataggca gaatagcgtt
     6241 aagctgggtg atatctcctg ttatgggcgg agttatggct tatctgattt ttggatatat
     6301 aaaatcaaaa attattattc cttcttctag aattcaaagt gagataaaat ctttaaaaag
     6361 agctagaaag acatataaag accaatacat aaaagagtta tcgaacaaaa gcgaagccga
     6421 gcagataaaa gagctaagac gcatagctat catcgatgaa gatgagtgtg aaggtgaaaa
     6481 ttgtgatttt agagataaga taaaagctat gaaagagcaa gaaaaaaata tagacggtat
     6541 ggtatttatg cgtacgcata tccctatggt tgctggagtt gctgctatga tcatagccgg
     6601 aagtatgcta tttaaaggtc ttaagcatat ggattttaat ctaagtatta tacagactat
     6661 ttggattata tttgttatag gtattgcggc ttatttggct agttttgcta tagtaaattt
     6721 gatgaagaaa gataatccgc aaaaaggtat aaatagaata tttggctggt tccaaatttt
     6781 taccgcttca tcttttgctt tttctcacgg tgcaaacgat atagcaaatg cggttggacc
     6841 gtttgctgct attttagatg ttttgaaaaa taatacaata aacgaaacta ctccgatacc
     6901 aggtatcgct atggctactt ttggtatagc tcttgttgtt gggctttggt ttttaggtaa
     6961 agaagttata gctacagtcg gtacaaagct tgcagagata cttcctacaa ctggatttag
     7021 tgcagagctt gcagctagta tagttatact catagctaca aaaatgggac ttcctataag
     7081 ctctactcat gttttgatag gtgcggtttt aggtatcggc gtgtataata gaaatgcgaa
     7141 ttggggaatg cttaaaccta ttggcttagc atggatcata acacttccta tatcgatgat
     7201 aggatcggct ataggatttt tggttatcaa aaatatcatg ggtctataaa ttttaaaaca
     7261 tactctcaaa tggaacttaa attgcttatt tataattcaa atccatttgg gagctaaatc
     7321 atgagaatta caaatcagct tataaacttc aataatcttt ctaactatca agcaagcgca
     7381 aaaagcattt atgatataaa ccaaagatat gatagtggat taaaaattca aaattcatac
     7441 gataatagca gtatttacgt agatggaacc agacttgaat atgagataaa tttacttgat
     7501 caagtaaagc aaactagcac aaaagctact gaattttcta aaaactctga taaggctcta
     7561 aatgattttg tttctaaact aactgagttt aaaaccaaac ttatacaagc aggtaacgat
     7621 atacataatg aaacctcaag aaatgcgatt gctaatgacc tagaaggttt aaaaaaacat
     7681 cttatagata tagcaaatag ctctataaac ggccagtttc tgttttctgg aaccgctctt
     7741 gatacaaaac ctatcgatag cgccggaaac tatcacggta acaatcagtt gataaatgca
     7801 gccataggag ccaaccaaac tactgcttat aatatagatg gacagactct atttttaggt
     7861 aaggataacg attataaaaa gatacttact acaaatgtta gtttgataga taataaaaca
     7921 aaattaacta gcgatgcaac aaattatctt aatgctgcaa ataagatatt ggatttaata
     7981 ggtggaaatt atcgttcaga agagctggtc gcacaaatag gcaaaatgaa tccggagctt
     8041 gattttgctg atcctgctgc gctagccgat actacgtttt atatgcaagg cagaaagcct
     8101 aacggcgaaa cttttagtac caaatttaaa gttactgcag attctagtat tcaaaattta
     8161 ttagataata taggatacgc gctcggtaat gataaaaacg gtaaaaacaa cgttgttagc
     8221 gttgctataa ataacagtgg tcaaatagaa gtaactgatc ttaaaagtgg aaatcaaatg
     8281 accgaacttc atctatttgg gcttaccgac gtgcgaggac cagagacttt taaagtcggc
     8341 gatagagata tagtcattga tcctgctact catacggatt ttagagtcac tacagaaaaa
     8401 agaaccgttg gcggcgtttc taccgatgtt ttgatcgtag atagtgtaaa tccagccgga
     8461 aacaaatatg agataacaca agtcgcaggc ggagatttgt ctattcaaca agtcgataaa
     8521 actaccggag caaatatagg agccgctaca aatgtaactc ctgtggccgg aaaacttgtt
     8581 ttaaatcctg ctgatttaac cggaggtata accgcagctg attttagagc ttatgatcca
     8641 gcgaatatag aagcattgtc agatagaggc gctagagatg aaaatggcaa ctgggtttct
     8701 tcggcaaatt taacggatac taaaacaatt acccaaaatg ttgagaaggg aaatgtatat
     8761 ttaactgaat ttataaaaag cggctttgaa gacgtattag gaaataaaag cgacgccata
     8821 gactacaata aacttcaatt tgaaaaaaca gacaataaat tatcaagcaa cgtctctcaa
     8881 gtaataaaag gcacaaatga gtatgctaca aactctacaa agctaagtgc cgttgccggt
     8941 caagctttgc aagctaatcc aaatagcaat ataactatga atataaagtc aaaagacgga
     9001 acaaattatg aagtaaaact aaattttaca gatacaaact cgaatactac cgaaagatat
     9061 cctactatca cagtaactcc gctagacgat aactgggaga agccagctac tgctactcct
     9121 gtatattatg gaaatgtata ttctggtaaa tataacgaag ccacaaaaac taccgatgga
     9181 gttataactc cggctgatga tatgacttat caacaattaa atgatatagt atctatggta
     9241 gcagctggaa atcttccaag cggacaacca aatactaatg ttattgcaaa cattgatacg
     9301 gcttctagaa atacgtatgc cgatgcaaat gctttgaaaa cagctttaaa aaacggtgtt
     9361 accgatgttc aagctcaagg aattatagat agagtagtag atgcttctgg tatcgcttat
     9421 cctatagatt ttactgctaa tggcaacgct ctaagagata taaaagacgc tatattaggc
     9481 gatcaagact acgttacatc aagatataat gagtacaata ctgctattaa aagtgcaagc
     9541 agtacgataa atactacttt ggattatcgt gggaatatgg ttgttacaga taaaacagct
     9601 tcaaaaacag atatagaagt tactcttttt gaagaccgag gcagaggaaa tattgaattt
     9661 accgatatgt ataaaagaga cgcagccgga aatatagaat tagatgctgc aggaaataga
     9721 ataatagata cctatcaatc aaccaccggt tcgttattta gttttacttc aaataatgct
     9781 attgctatag atgagccaag tgttgatata tttaaagatt tagatgatat gatacaatct
     9841 gttagagatg gcagttatag aggagatcca gatgctagtg atcctcgaac taccggtatc
     9901 caaggtgctt tgaaaaaaat agatcacttg atggatcaca taaataaaca acacacccaa
     9961 atcggttcgt atacaaactc tttaacggct actggtgatc gcgctactat ccttaaagtc
    10021 aatgtatctt ctgtaaagtc tgagataatg gaagcagata tcggagagac gtatcttatg
    10081 tttcagcaaa gacttatggc gtatcaagct atgctccaag ctactgcaaa aacaagtcag
    10141 ataagtctgt taaactatat ataaatttag ttttgctata ataaagctaa atttactcaa
    10201 ggactttgat attttaagag aaagtttgct tattataagc gtttgtattt taatattttt
    10261 tggagttgcg actatcgttc caaatgcctc ctttgtgggg acatttggta atattttagg
    10321 tagttttaat tataaattat tcggtttttt ggcttatatt tacccatttt tacttcttta
    10381 tccggctatt ttgaactaca agaattttaa gaaatttaat attaaacttt taggaaatat
    10441 aatcggcgca ttgcttctgt tttttgctat tttgttgctt atttcaatgt ttgataagag
    10501 ttacggagga gctataggaa cgttttgtat agaagcttta agatctgtta taggaagtgt
    10561 cggaagtgct gtttttatat taatgatatt ttttatatca tttggacttg tttttgatga
    10621 tagacttgat atcgttctta aaaaagcttt tgttgatagg gtatctgctt cggataattt
    10681 aaatttaaaa gcgcattata ttcctaaaaa acagaaaaat gatgtaaaaa aaatcgaggt
    10741 tgatcttgct ataaatagta aaattataga cgataaacta gaaattaaaa atgatgtaag
    10801 cagtcttgag ccaactgaaa atatcataga tattaaagaa gcaaatagtt taaaagacga
    10861 caataataca aatcctatga ctactatagg cggtgtcgag atattaaatg aagtagctga
    10921 aaatagagag cttttaaatc agatagaaaa aggtaaagta gaaaaaccaa aagattttaa
    10981 gctgcctcct cttagttttt taaatgatcc tcctaaacgc tcaaaaaata taaatgaatc
    11041 cgaaattgat caaaaaattg ctgatttgtt agataaattg cgtcgtttta agatagatgg
    11101 agatgttgtt aggacgtatt caggacctgt cgtgactaca tttgagttta aaccagcagc
    11161 tcatgtaaag gttagtaaaa ttttaacttt gcaagacgat cttgctatgg ctcttaaagc
    11221 tcaaactata cgtattcaag cgcctattcc tggaaaagat gtagtaggta tagaaatacc
    11281 aaataaaaat atagaaacaa tctatctaaa agagatttta gaaagcgaca tttataaaaa
    11341 tgctaaaagc gaacttactt tggctcttgg caaggatata gtcggagatc cttttataac
    11401 tgatttgaaa aaactccccc atcttcttat cgcaggaact actggaagcg gaaaaagcgt
    11461 gggaataaac gctatgcttt taagcctgct ttatagaaac tctccaaaaa ccttacgcct
    11521 tataatgata gatcccaaaa tgcttgagtt tagtatgtat aatgatatcc ctcatctatt
    11581 aactcctgtt ataactgagc ctaaaaaagc tatttccgta ctctcaaatt tagttgcaga
    11641 gatggagaga cgctataaaa taatgagtga aacaaaaaca aaaaatatag aaacatataa
    11701 tgaaaaaata aaaaaagatg gcggcgaaac attgccgttt atcgttgtta tcatcgatga
    11761 acttgcggat cttatgatga cgagcggaaa agaagttgag tttcatatcg gacgccttgc
    11821 ccaaatggca agagctagcg gaattcatct cattgtagct acccagcgcc caagcgtaga
    11881 tgtagtaaca ggactcataa aagcaaattt accaagccgt ataagttata gagtagggca
    11941 gaaaatagat agtaaagtta tacttgacca aatgggtgcc gagagtttgt taggacgcgg
    12001 cgatatgctt tttacacctc ctggaagtcc tggtatagtg cgtttgcacg ctccatttgc
    12061 tagtgaaaaa gagatagaag aaatagtgga cttcttgaaa gaacagcaag acgtcgtata
    12121 tgaggagagt tttttaaaag atgagtctag cgctgttgga tctagtgaaa atggattaaa
    12181 tacaggcgaa acagacgagt tatatgaaga agcaaaaagt attattttaa gtgaagaaaa
    12241 gacatctata agttatcttc aaagacgttt aaaaatagga tacaacagag ctgcaagcat
    12301 aatcgaacag cttgaaatag caggagttct aacgcctgta aatgctaagg gtcaaaggga
    12361 tattataaga tgaaatttaa tcagcttttt acatattttg ttatacaatt aagctttatt
    12421 ttagattaag gatattaaat tgagttttga agatgatatt tttggcggtg atcctaagga
    12481 taagtttttt gatataattt ttaatgcaaa tagaaattta gtggaaaacg aattagaaaa
    12541 agttcttatt gagcttgcta ttttacgtga attagctgag caaaaaggta tatccgatat
    12601 ggatataaag tcatttgaag cgttaaatac tgacgttgtg caagacggat taaatgatat
    12661 ttatataggt gtaacaggcg aaattctaag tcaaaatgag taaaatatct ctatttttga
    12721 ttataggtat ttttttaaat ttaaatgccg ctgctcctaa atttgagtat gtaaaacagt
    12781 ttgagctgaa aaaagatgag aaagcttgga ttatatatac cgatagaaaa gacggtacaa
    12841 aagatatttt cgagttttca tggactttat atgataatac aaatatggtt ttgcatacta
    12901 aatttagaaa ttatcctcgc cagataatgc ttagtcttag gcgtgggttg gagctttata
    12961 aacaaattat attagctaat actagattag aaaaacaaga tgaggttgct ttgtatcttg
    13021 agtttgccga gttcaaaaaa ggaatagctg tttttaaagc ttatacatat gataatgcaa
    13081 agcgtataga agtcgaatat aagccagata aaggggatta gatggagagg attgatgata
    13141 tcttaaaaga gtttgtagat tcactaaatt accctcttgc tagtgagatg tttagccaag
    13201 taagctcagg aaaaaagcta agaagcaagc ttatattaaa aatagcagga gcgagtgaag
    13261 ctagttttaa gctaagtagc gtcgtagaga ttattcattt agcaagtttg cttcatgatg
    13321 atgtgataga tgactcttta ataagacgag gaaaacctag cataaatgca atattcggta
    13381 caaaaaattc tataatgtta ggtgatattc tttattctaa aggttttaac gagatagtta
    13441 aattcgacat gaaaatagca gatattatct cagatgccgt ttgcaagcta agtatcggtg
    13501 agcttatgga tgtagaactt ggtagctctt ttaatgcaga taaagaaaag tatctgaaaa
    13561 tgatatattt taaaactgcg gttctcatag aagctgctgc aaaatctgct gcaattttag
    13621 ctggctttga tgagcaaaaa tacggcgatt atggtaaaaa tcttggattg gcatttcaaa
    13681 tagtagacga tatacttgat ataacaagcg atgaaaagac actaggaaaa cctgctatga
    13741 atgattttaa agaggggaaa accactcttc catatattta tctatatgaa aaattagaaa
    13801 atgaagataa agcgatttta aaaaatttat ttaaaaaaga gcttgacgat aatgaaattt
    13861 tatggattaa atctaaattt aaagagtttg atattataaa tttaagtata aaaaaagcaa
    13921 aagattttgg tgctaaagct atagaaagtt cacaaaatac tgaacttaaa atgatagttt
    13981 ctagtatgat agatagggat ttttaatgca ttatgtaagt attagtttta ctcataaaaa
    14041 tacagatatc ggagttagag aaaaactctc ttttagtgat aataatagac gaagggaaat
    14101 tttgcgtctt ataggagcaa atgatagtat tgccgagtct atggcgctta gtacttgtaa
    14161 cagagtggag atatttgctt atgttttaga cacgcaaagt tctattagac atattttaaa
    14221 ctctatttct atccttactt tggtaccgtt tgaagcttta gaattaagag ctgatatata
    14281 tgaagatcaa ggtgctatac accatctttt tgccgttgca agttctcttg atagcttagt
    14341 agtgggtgaa actcaaatag caggacagtt gaaagaggct tttaaatttg catatgataa
    14401 tgaggattgc ggtgtaaata tcagcagcgc tatgcatttc gcttttaaat gcgcagctga
    14461 agttagagca ttaactacta ttagtaaaaa tccagtttcg gtttcaagcg tagccgtagc
    14521 taaagctaaa gaaatttatg gcaatatagg tggtatgagc gcagtagtca taggcgctgg
    14581 agagatgagt cgtttagcag cccagcatct tataaacgcg gaagtaaatg ttataattat
    14641 aaacagagat gagataaaag cgcaaacttt agcaaaagag ctaggcgagt tagcgagtta
    14701 tgctagtttt gataagctta gcgagtatat taatagatat aggcttattt ttagtgctac
    14761 tggtgctcct aatgctataa ttactaatga gataatagaa caaaaagatt tccatagata
    14821 tttttttgat atagccgttc ctagagatat agatatagaa gaagacgagt atatacatgt
    14881 ttatgcagta gatgatcttg aagagatagt aagaacaaat ttagctctaa gagaggagca
    14941 agcaagtatc gcttactcta tagttggcaa atccacaact tcatttttca aatggagact
    15001 ttccgaagga agtactccag ctattaaagc tttgcgttta aaagctaaag atatcgcctg
    15061 taaagagata gaaaaagcgg taaaaaaagg gtatttaaag tgtagtgatc aagatgaggc
    15121 aagtaagctc gtacaccagg tttttaaagc ttttttacat acgcctagtg tgcgcttgaa
    15181 agagaaaaat agtgatgata tactaaaagc actcgaatat ttatttgaca taaaaataca
    15241 aaaagatgag aatttagaag ggaatttaaa gtgaaattta caaaattata tgtacctact
    15301 acaaaagaag ctccaaaaga cgccacttta cctagtcatc agtttcttat aagagccgga
    15361 tttgtagcgc agataggaag cggactatat aactttttgc ctcttggaaa gagagtttta
    15421 agaaaagttg aaaatatcgt aagagatgaa atggacaaag caggagcaaa tgaagtagct
    15481 ttaagctttg tggttcccgg tgagctttgg aagcaaagcc ggagatattt taaattcgga
    15541 aaagagcttt tgcgcctaaa agatagaaaa gacaacgatt ttttactagc tccgactcac
    15601 gaagaatcta tagtggatct agtgcgcgat aaagtcacta gttacaagca actgccgctt
    15661 catttatacc aaataggact taaatttaga gatgaggcaa gacctagatt tggacttttg
    15721 agatgtcgtg agtttataat gaaagacggt tatagttttc atgcaagtga agctgatcta
    15781 aagcgtgagt ttgatcttat ggagacaacc tacactaaga tatttagtcg tttggggctg
    15841 aatttccgcg ccgttgaagc tgatagtgga gctatcggag gaagtggtag caaagaattt
    15901 atggtgctag caaaaaacgg cgaagacgat atcttgataa gtgacgcttc aaactacgcg
    15961 gcaaatatag aagccgcaaa aagagcaaaa agagtttgca aggctgagcg acctcagagc
    16021 aactctatgc agaaattttt tactcctggt tgctctagca tagctaaagt taccgagttt
    16081 tttaaggtag atccgtttta tactataaaa gccgtgatga aaaaggctat ctatgaagat
    16141 agcgaaaaaa tagtagtatt tttcgtgcgt ggagacgacg agcttcaaga agtaaaagct
    16201 tgcaatgctt gctccgctct tgagctaagc gacgctagcg aagaagaagt tatagccgca
    16261 gggttagttc ctggatactg cggtccagtc ggacttcatg aaaatataga tttttatata
    16321 gataatgaat tagaaaatga aaaagagatg atatgcggcg caaatgaaaa ggattatcac
    16381 gctattggag taaatattat aaatttcaat aaagatagat ttaaggatct agcagaagtc
    16441 aaagccggag acaaagcgct tgacggtgga gttttatctg tcactaaagg catagaagta
    16501 gggcatatat tccaacttgg agtaagatat tctgagacca tgggtgctac atttttagat
    16561 gaaaacggta aatcaaaacc gttttttatg ggttgctatg gtataggcgt aagcagactt
    16621 gtagctgtta tggtagaagc cagtcatgat gaaaaaggct gcatttggaa aaaagagtgc
    16681 gctcctttta tggtgcatat aatagtttca aatatcaaag acaccgagca gatgcaattt
    16741 gctctaaatt tagaatccaa tctagaaagt agcggggtcg aagttttgct tgatgataga
    16801 aacgaaagat ttggcgtgaa aatggcggac tttgagctta taggcgtacc ttttggcgtg
    16861 gtcgttggta aaggtttgca aaacgcagaa gttgagttta taaaaagaga cgggctagaa
    16921 aaagttaaag taagctcaga tgagatatta ggtaaattaa aagagataat atgataaaaa
    16981 tttctctatt tccgtatttt gttatcgaga ttgtctgtgt ttttatttat attataaatt
    17041 atggattttt aaatttttta ggtgaagttt ttcttagtgg aattataggg ataatactta
    17101 tatttagtta tggatttt
//
LOCUS       DAPPKW010000033        16715 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.033, whole genome shotgun sequence.
ACCESSION   DAPPKW010000033 DAPPKW010000000
VERSION     DAPPKW010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16715
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.033"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(54..329)
                     /locus_tag="RPW04_000975"
     CDS             complement(54..329)
                     /locus_tag="RPW04_000975"
                     /inference="COORDINATES: protein motif:HMM:NF033894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HDX6295071.1"
                     /translation="MKKTVAFSVLLLGLFYLTGCFEEEIKTVEYFKTHADELEKTIAE
                     CKKADKMTESKKKECENAFKAQAMLNHFKPASRGLFEDEPQDKNTTK"
     gene            563..748
                     /locus_tag="RPW04_000976"
     CDS             563..748
                     /locus_tag="RPW04_000976"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295072.1"
                     /translation="MPKKNNPINEITKQKLEIAKDIGISRATLYLWKNTRPKLYEIIM
                     RHYQIDENSQNQSQENK"
     gene            1333..2412
                     /locus_tag="RPW04_000977"
     CDS             1333..2412
                     /locus_tag="RPW04_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002800985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HDX6295073.1"
                     /translation="MAKIRTKKAVVTQDNRFVFAKYDLNTNEMKFFMWIVAQLNSQKD
                     QLFQVCEIPLKEIFEIWNWNNGVIDYSYCAQVVETMSKKVYIEDFKLLDEKTMKEVKV
                     KTAMPLFQWIRYQEGDAYISYKLNDSLMEYLINLKQNFTQLKFKDIQQMKSAYSIRIY
                     NMLMSEIGQNRTIFKINLEVLYNILEIPGSLRPWFEFKKNILQRAIKDINTKSNLVIL
                     DVEAKKTGRKVTDIEISFEYKNNKKRIERDTKKRENFIKAIIDVIQNQYSGKPIKTKE
                     HGIMICMGASYNKEKNQIIMQCCDQKDYNYRVEFIMSNDFSSIKILEEKRQSAIDQFY
                     LEEFLKTDHNNIFDEAGLKKLFNIK"
     gene            complement(2416..3423)
                     /locus_tag="RPW04_000978"
     CDS             complement(2416..3423)
                     /locus_tag="RPW04_000978"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295074.1"
                     /translation="MSRKMINFDLDTKILEQEYPKKDYRQAYDDIKKFMLSNGFEHRQ
                     GSGYLSLKSMSTYDVAIFISDISEKFDWLANSAKKFDITNVGKTYDLLDNLKEVQLMK
                     NTEQLNNMSLTITSIENLRPELQKIFKTGTEISKQDELSTLINTLDHVDKLVNIKNKN
                     DLKFANDKETIGLKIKTKENKSFDLNIPLGSNNFSKGLEHLVAVGSNDISREKITEKE
                     QDNYKEIVKKFGKTNVNSNLQEGQIFDKFLNGGLQSLQAFASIGGDEMKEFSNSFIKS
                     FQVLNLNQNSKTTSPNIQTNMEKDISNLDKKLADAVKALSPKQDKEKELTTYKNLERG
                     R"
     gene            complement(3408..3737)
                     /locus_tag="RPW04_000979"
     CDS             complement(3408..3737)
                     /locus_tag="RPW04_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005220032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295075.1"
                     /translation="MLGTRIVMNEDKIIRENKHDLIKVYKAIDEYAGECGLIKQDKFT
                     YICREDDEQDFPHLMKFTHLSLMKSPWFRENVKEWLWLDDEEGNGDLIEATNKLLNKG
                     YKLCLEK"
     gene            complement(3760..3990)
                     /locus_tag="RPW04_000980"
     CDS             complement(3760..3990)
                     /locus_tag="RPW04_000980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295076.1"
                     /translation="MLNKYDSEIEILQEKLKSLKKKKAEAEKAKYSKIAKMLTKHMQD
                     NQNFFNEFIQICQKYEMKELLIELDNFKQQHN"
     gene            4208..4747
                     /locus_tag="RPW04_000981"
     CDS             4208..4747
                     /locus_tag="RPW04_000981"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295077.1"
                     /translation="MVKKYRQEVKLSNENYEFIKSLKEKENATFNEIINSMINLYREK
                     PRHTNIARIKKSEKQSHRIYITLTDTEYNFLNNQAIEHGFSSATKEVIFRLTNSMYDE
                     KIFSNTDMNILLDTLNNINKIGRNINELIRILKEKSNTKININIDRLGDLLTDIYSFI
                     KTIDKEITSYRTEQKNRLV"
     gene            4750..5913
                     /locus_tag="RPW04_000982"
     CDS             4750..5913
                     /locus_tag="RPW04_000982"
                     /inference="COORDINATES: protein motif:HMM:NF015397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HDX6295078.1"
                     /translation="MAKNNFFDEDIFKAKRVIKRFEAKQKSTYMYSIKSKKSISYSNK
                     KNSKEVVVKITGSAKDFEGLKGHIKYISRNGDIELFSSDNEIFSGKDDLKNAVANFNS
                     GDKIPTKNELFTNAKKPKRETLNFVFSMKDHLQAPANKIQEAAVKVLKEKFSDNYFLA
                     AIHNDTDNPHCHICLKITDAHGKRINPKKSDLDELRKNFALELNRMNIDAIATIRKKV
                     KIDKDGKVIDEPEIKSHHYEVTGFGEAPYKFNADNDQSYYVNYKTPTGKIVTIWSKDL
                     KKVVEDNQINVGEYCRFAITGEQEMKFVYLDKKTKNTIEKTTYKKMWDVSVNGRLEKE
                     LKPLKKYSMPTIKIIKKFNVDVKQNITQAVVKPKNDTIKISHNLNIQINEKTL"
     gene            5927..6574
                     /locus_tag="RPW04_000983"
     CDS             5927..6574
                     /locus_tag="RPW04_000983"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295079.1"
                     /translation="MQKFIKTLDNIISKERLSSYSSIDEHCKNLRIIAILTPTIAMIE
                     ISIRNIVDFYFKQIYGTEWIKNSVHEQILLEKESIDRRFKFAELSHDQYLSNFSFGKI
                     IYLAKENHLQTYIFENLNELDFRDFSDSNRNFFFFNDRKNDFSDIDKADILLSLLLTI
                     RNRCYHWENILKIRSVNNQTYPRITHRLNNTNIGIMPKELKKFLSDVLNKFIGII"
     gene            6907..7263
                     /locus_tag="RPW04_000984"
     CDS             6907..7263
                     /locus_tag="RPW04_000984"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295080.1"
                     /translation="MILEEKVELLTSVVLYDDKIAHLVLSCSLGIGAYNAIFDIMDNF
                     DKKPFGSYDFYDIEREFEKIGVDRQTLKHILIIFYSERRFINTLTNYLKTNYESFGNV
                     SYELETMYNDLVANLH"
     gene            7376..7939
                     /locus_tag="RPW04_000985"
     CDS             7376..7939
                     /locus_tag="RPW04_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295081.1"
                     /translation="MEIAVVSKKGGVGKTPFAFSIAKDLGYFLQSNDNSCIEQIYPGK
                     AKILNKVQNIDNCVYDFGGFVESGVLDVIKKCSAVVVPCTPTYNAILRTVETISEIEP
                     INKNIIIIATNFKDDKELEFLQSNLNDRYKKLSIFYFKNSKIVNNAINTGLSFTELYN
                     ENSLSQKSYHGFFTEYSKLLQRITDGK"
     gene            7929..8186
                     /locus_tag="RPW04_000986"
     CDS             7929..8186
                     /locus_tag="RPW04_000986"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295082.1"
                     /translation="MASNLNMNIDDVLKQSGNQKTYTAADQKEKSIGGRPRIDESEKL
                     TKQISLYLNEGEFEFLTEYAKRNYMNKNSVVRMLIARAMDE"
     gene            complement(8246..14200)
                     /locus_tag="RPW04_000987"
     CDS             complement(8246..14200)
                     /locus_tag="RPW04_000987"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012403.1,HMM:NF012493.1,HMM:NF019291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Eco57I restriction-modification methylase
                     domain-containing protein"
                     /protein_id="HDX6295083.1"
                     /translation="MPKRKKQWDEGFDNLFSQANLAQMDAINQRLNEVTQERTNDNGR
                     DTGDTGRELLQNAENRGAHGSWDRDRADRVSSGLEYARSDIERNHIGGNSQTIHEISD
                     IELLSTNDNTQVVQTSGINGNVGGDTQYNRAGAKLRSGTARNDGTRSLFDTISQTDER
                     AGEYGFGNSQSSQHQSISGLYNGTGENENGQRQELSIQPTISQRESVYHVTSTGSHDD
                     FIPSNEVIIAGVKDKYRKNFNAIKLIKELNSITPPKHLQDKTIYATKEEQEILNGFSG
                     WGALPQVFDPKNESWNKEYNELKQLLTDQEFAEARNSTQNSFYTPKIIIDTIYKSLDR
                     LGLNNDDHKKEILEPSVGTGLFLGFNKQNNYHFTTIELNELTHQICQKLYPNQLNLHM
                     GFEEYCPEKRFDAVIGNPPYSQARIYDGNFKELNGTTIHNFFAAKGIELLKDDGIMAF
                     VTSSHFLDAKDSQTREYIAEKATFLGAVRLPNNAFKNAGTEVNTDIVIFKKGVSKELN
                     QDWLNVKNLNDSKFYINEYFAQNPQNILGNLEIKVGRHGEELVCTEKQDLNLQDALEL
                     FVENLPKNIYKFKEQEVDQNLVYIDKNDPIYKQNEAYFDSLKPNNYLKFNGAIYLKEK
                     NYESNDKFVVRKIELNKLDEKRVSSFIQMRDTYNQLIKLEKTDIADSDPILVNARTKL
                     NELYDEYHKSGDFLHNSRKNRAIKQDVEAQKIISLEANYDKGVTAKEALQKGISPRNE
                     NAQKASILHTRAIRAEADIKFDNAPNGLFASMNKFGKVNIEYIAKELNQNPSDIIKEL
                     TSKDLIFLDPTKFAAGETIYEFAPKYLSGNVKEKLKVATELAKTYTELNHNVKALTAA
                     LPIDIDASDISVSMGTPWIPLKYYNQFFEKQFGISKENWQLKYNERAGAWSFTGNDYA
                     MSEYNRKRFSYTHSNHRQSIDTFAIAEAALMRRSLRITKDSDTETVTNKNGEVVPKKV
                     TDVEATQMANQKVENLKNLFNDWIMDDLERRNDLAKIYNDKFNCYVKKHYDGEKLEIK
                     GLNKSYTLRKHQLDAVARAINERVCLFDHEVGAGKTLSSICSVMEQKKLGLINKPLIA
                     VPNHLISQWESEFMNAYPDANLLVAEEKSTSPENRDEFFAKIANGEYDAILITHSQLE
                     RLPVPLKITQKVLEEQIEELRESIRLKEENQENNNGSKISVKRLESRVDNLETKLITL
                     LETKDKTKLLDFSDLGIDCLVVDESHMYKNLPFSTSLDKVKGLGSPAGSAKAINLFEK
                     TTFLHENDKKVIFLTGTPVSNSLTELYAIQKYLAPDELKTQGIYSFDAWAATFAKIDT
                     TFELDASAQKYKPVTRFSEFENLPEIANSYLNFADIVTNDDIKQYHKHYVPEVDIIKS
                     ISPRSDQVANFIGVQDINGFFNEGSIIYRMEHMPDDPSEDNYLKCTSDAKKAGLDFRL
                     IDPGAADDPKSKINNCVENIYKEYKEWEADKGTQLVFLDIGTPKSNQSSASLTIDNTQ
                     NEPQIKQEQEFANINDILSDDSIDESEIADIDSSNDTFFLYGDLYKKLVAKGIPRDEI
                     AFIHDTNGSNSKKIELFGKVNRGDVRILIGSTAKMGAGTNVQERVTAIHHVDVPWKPS
                     DFVQRNGRVIRQGNQLFMRDPENFKIKEFRYVTEQTYDAVSWQIIENKTKSIVNFRKG
                     VIGGDRTLSGFDEDVASVAEMKAIATGNPLMLTHIQIKTALDKEEMLLKEFNKEKHRN
                     EQTLDANIKKIEYLEKENEKISRAILQRDEFKSDDFKCNLYINSKDALDIMPITIPKD
                     DTSNETRATQEKLENTFRNNLNMLLAKDGAEVSFMDFKGFKVSGYYEKTLNAVVFELE
                     SLKTGDHLAPANLVYNQQGNNLLTQENIPYTGFLRRLNNYMNNMEESIDKNKAKANEL
                     KANNKGLAQIISENREYGRLNLLEALRKDEQTINIELNKMSANKEYKSNFAARSLELK
                     DRLDKERKSGTQSIIESKIEVKNLER"
     gene            complement(14309..15331)
                     /locus_tag="RPW04_000988"
     CDS             complement(14309..15331)
                     /locus_tag="RPW04_000988"
                     /inference="COORDINATES: protein motif:HMM:NF024554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HDX6295084.1"
                     /translation="MNHTREETAQILMGLGYEIDRSWKFRIRVDDTTPSASINGKTGK
                     IKDFGSGWYGSAIDLMVDFHGYSKANAFKKAQEILGQDIDINFSNFTHTKQSDIKEQP
                     FITQNYIDKFQQERKENFKRYWELLSQTMPTATKEQKEKISKQFEIGYTKKGDRLIMP
                     IKDEFGNCVTLWKYNKHPTPFIGENGEMIQLPKLMFSGNRKRSPLNIGSLEQYATASK
                     ESNEPIFIMEGEKDCLNALAKGLNAITLGSANALVEERHIPLFKDTKITICYDYDEAG
                     INGAKALKEQLKDTCKSVEILDWEKIFTQFKWSKDEIKKGFDFTDYLVKTEQEHKKEI
                     HKDIER"
     gene            complement(15328..15825)
                     /locus_tag="RPW04_000989"
     CDS             complement(15328..15825)
                     /locus_tag="RPW04_000989"
                     /inference="COORDINATES: protein motif:HMM:NF013618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HDX6295085.1"
                     /translation="MRLVFIALFVCLVANANDTKYNDLFFKYGALFNIPHELLWGIAK
                     HESNFDPKAINYNTNGTIDMGLMQINSIHKGAIEAVNLSLDDLYNPKVSVYFASKILS
                     KCLKRHGFTYQGLNCYNGRTANNNYHKKVLAQILKRREKASYITYKNYKTYITCKTQS
                     ECIIK"
     gene            complement(15826..16218)
                     /gene="ssb"
                     /locus_tag="RPW04_000990"
     CDS             complement(15826..16218)
                     /gene="ssb"
                     /locus_tag="RPW04_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004274959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDX6295086.1"
                     /translation="MHTYVSVIGNLTRDIELRYTQSGMAIGNTAIASTHKFSVNGEKT
                     EETCFIDITFMGKTAEIANQYLQKGSKVFIDGRLKFDQWTDNNGLARSKHSIVVDKMV
                     MLDSKKQDSNDKEPQQHEQHSQDNMQAE"
     gene            complement(16237..>16715)
                     /locus_tag="RPW04_000991"
     CDS             complement(16237..>16715)
                     /locus_tag="RPW04_000991"
                     /inference="COORDINATES: protein motif:HMM:NF025642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PcfJ domain-containing protein"
                     /protein_id="HDX6295087.1"
                     /translation="ANAEGIIRDYVNMATTQEGNINLKIKSFKRLRAEHDRLMLNIRI
                     EKAPEVKISDENSFLKLKLPCDIKMLTTKKEIVEESIANHNCVASYIQRVNAQKCFIC
                     SLRRDNERYTIEIRRQRNKFYLAQIKGFSNSEPPNEIVEYVNNAILANNKRTQQIQ"
BASE COUNT         5321 a         2622 c         2554 g         6218 t
ORIGIN      
        1 gaaattaagc ttaatttttt aaaataattc actttttttc ctttctttaa agattatttt
       61 gttgtgtttt tgtcttgtgg ctcatcttca aacaagcctc ttgatgctgg cttgaaatga
      121 tttagcatcg cctgagcctt aaaagcattt tcacactctt ttttcttgct ttcggtcatt
      181 ttgtctgctt ttttgcattc tgctatagtt ttttctaact cgtcggcatg agttttaaaa
      241 tactcaactg ttttgatctc ttcttcaaaa caacctgtga gataaaataa gcctaatagc
      301 aaaacactaa aagcaactgt ttttttcatt ctatcctcct ttgcattagt ttatagtcac
      361 aattttattt taaatgctct taaaggcata taaaaattta caaaatattt acaccaatgc
      421 actataccaa tgtgctatat agatatttta gtttatttta tgctataatt ttaagaaatt
      481 aagacacaaa gtatctagct aatgtctata ttttagaatt atataatatt tttagaaata
      541 aaatcaagag aaaaataaaa atatgccaaa aaaaaataat ccgatcaatg aaataactaa
      601 acaaaagctt gaaatagcaa aagatatagg gatttcaaga gcaacgcttt atctatggaa
      661 aaatactaga ccaaagctat atgagattat tatgcggcat tatcaaatcg atgaaaattc
      721 ccaaaaccaa agccaagaaa acaaataaaa gcccattttg tgagtatatc tataaaaaga
      781 aaaacctgtt tctataacaa attctaacaa caaaactcgt cttttgaacc aaatttaaaa
      841 actaaaagcc ctaaaatagg cactttcgta ataaagaaaa aactcgtttt tagagctatt
      901 tttaaaaaga aaaaactagt ttttcgcaaa tttagacccc taaaataggg cgtttgaagt
      961 cgcttaaaca agaaatatgt atcacgcacg agaccaaaaa cggcactttt tttaaaaatt
     1021 atgcgttttt aacgataaaa gatatatttt tcgagctaaa tttaaatatc gaaagcccct
     1081 aaaataggca ctttcgtaat aaagaaaaaa ctcgttttta gagctatttt taaaaagaaa
     1141 aaactcgttt ttaaaaagaa aaaactagtt tttcgcaaat ttagacccct aaaatagggc
     1201 gtttgaagtc gcttaaacaa gatattaaac aagtaattat attaaaaaga attttttata
     1261 aaactagtaa aaaaaaaata aaaactcgtt ttttatggta aaataccaca aaatctttaa
     1321 aaaggaaaaa atatggcaaa gatcagaact aaaaaagcag tagttaccca agataataga
     1381 tttgtgtttg ctaaatacga tttaaacacc aatgagatga aattttttat gtggatcgtt
     1441 gcacaattaa atagtcaaaa agatcagctt tttcaagttt gcgaaattcc tttaaaagaa
     1501 atttttgaga tttggaattg gaataatggc gttatagatt attcttactg tgcccaagtc
     1561 gttgaaacaa tgtcaaaaaa agtatatatc gaagatttta aacttttaga cgaaaaaaca
     1621 atgaaagaag tcaaagtaaa aacggcaatg cccttatttc aatggatacg ataccaagaa
     1681 ggagatgcat atataagtta caagttaaat gatagcttaa tggaatatct cattaatctt
     1741 aaacaaaact ttactcagct aaaatttaaa gatattcaac aaatgaagtc agcatacagt
     1801 ataagaattt acaatatgct tatgtcagaa atcggacaaa acagaacaat ttttaaaatc
     1861 aatctagaag tattgtataa catcttagaa attcctggaa gtttaagacc atggtttgaa
     1921 tttaaaaaaa atattttaca gagagcaatt aaagacataa atacaaaatc aaaccttgtg
     1981 atcttggatg ttgaagcaaa aaaaactggt agaaaagtta ccgatataga aatttcattt
     2041 gaatataaaa ataacaaaaa acgcatagaa agagatacta agaaaagaga aaattttatt
     2101 aaagcaatca tagatgttat tcaaaaccag tattctggaa aacctataaa aacaaaagag
     2161 catggcatca tgatttgtat gggtgctagt tacaataaag aaaaaaatca aataataatg
     2221 cagtgttgcg atcaaaaaga ttataattat agggtagaat tcataatgag taatgatttt
     2281 agtagtataa aaattcttga agaaaagaga caaagtgcaa tagatcaatt ctatcttgaa
     2341 gagttcttaa agactgacca taataatatc tttgatgaag cgggactaaa aaaactattt
     2401 aatattaaat aataactatc tacccctctc taaattttta taagttgtaa gctctttttc
     2461 tttatcttgt tttggagata gtgctttaac ggcatctgct aattttttat ctaaatttga
     2521 tatatctttt tccatatttg tctgaatatt tggcgatgtt gtttttgaat tttgatttaa
     2581 atttaaaact tggaaactct taataaaaga attactaaac tctttcattt catctccacc
     2641 aatactagca aatgcttgca aagattgcaa tccaccattt aaaaatttat caaaaatttg
     2701 accttcttgt aaattgctat ttacatttgt ttttccaaat tttttaacaa tttctttata
     2761 attatcttgt tctttttcag taattttttc tcttgaaata tcattgctcc caactgcaac
     2821 taaatgttcc aagccttttg aaaagttatt agaacctaat ggtatattta aatcaaaact
     2881 tttattttct ttggttttta tttttagtcc aattgtttcc ttatcatttg caaattttaa
     2941 gtcattttta tttttaatat ttacaagttt atctacatga tctagcgtat ttattagagt
     3001 agataattca tcttgtttgc taatttccgt cccagtttta aaaatttttt gtaactcagg
     3061 tcttaaattt tctattgaag ttattgttaa tgacatattg tttaattgct ctgtattttt
     3121 cattaattga acctctttta aattgtcaag caaatcataa gttttgccga cattggttat
     3181 atcaaatttt ttagcagagt tagctaacca atcaaatttt tctgagatat cagatataaa
     3241 aatagcaaca tcatatgtgc tcatagattt taaagaaaga tatccgcttc cttgtctatg
     3301 ttcaaagcca ttggataaca taaatttttt aatatcatca taggcttggc gataatcttt
     3361 tttaggatat tcttgttcta aaattttagt atctagatca aaattgatca tttttctaga
     3421 cataatttat atcccttgtt tagaagtttg tttgtagctt ctattaaatc gccattgcct
     3481 tcttcatcat ctagccatag ccattctttt acattttctc taaaccatgg tgacttcatc
     3541 aagcttagat gtgtaaattt cataagatgt ggaaaatcct gctcgtcatc ttctctgcat
     3601 atatatgtaa atttatcttg tttaatcaag ccacattcac cagcatactc atcaatcgct
     3661 ttatagactt tgataagatc gtgtttattt tctcttatga ttttatcttc attcataaca
     3721 attcttgtac ctaacatatg ttatcctttt tatgaatttt taattatgtt gttgtttaaa
     3781 attgtctaat tcaatcaaca attctttcat ctcatatttt tgacaaattt gaataaattc
     3841 attaaaaaaa ttttgattat cttgcatatg ttttgtaagc atttttgcga ttttactata
     3901 ctttgctttt tctgcttcag cttttttctt ttttaaagat ttgagttttt cttgtaaaat
     3961 ttcaatttca ctatcgtatt tatttaacat tgtatgctct ccttattatt ttttatgatt
     4021 atatcatttt tatttttaat ataagttaaa aactaagaaa tttatatttt ttttataaaa
     4081 aataaaatat aataatttat gagaaaatag ttatatatac aggatagcct tttacttcct
     4141 ttttttccgt agtaaaaaag tcgtaaaagg cgaattctct gcgaggctca catttgaaag
     4201 gcaggctatg gtaaaaaaat atagacaaga agtaaagcta tcaaatgaga attatgaatt
     4261 tattaaatct ttaaaagaaa aagaaaatgc aacttttaat gaaatcataa attcaatgat
     4321 aaatttgtat agagaaaaac caaggcatac aaatattgca agaataaaaa aatcagaaaa
     4381 acaatctcat agaatttata ttacacttac agatacagaa tataattttt taaacaatca
     4441 agcgatcgag catggatttt catcagctac aaaggaagtg atatttagat taacaaattc
     4501 aatgtatgat gaaaaaattt tcagcaatac agatatgaat attttgttag atactttgaa
     4561 taatataaac aaaatcggaa gaaatataaa tgagctaatt agaattttaa aagaaaagtc
     4621 aaatacaaaa attaacataa atattgatag actaggcgat ctgcttactg acatatactc
     4681 ttttataaaa acaatagata aagaaataac atcttacaga acagaacaaa aaaataggct
     4741 ggtataattt tggcaaagaa taattttttt gatgaggata tttttaaagc aaagcgagtt
     4801 attaaacgct ttgaggctaa gcaaaaatct acttatatgt atagtataaa atctaaaaaa
     4861 tctatatcat attctaataa aaaaaatagt aaagaagtgg ttgtaaaaat tacaggatca
     4921 gccaaagatt ttgaaggact taaaggacat ataaaatata tttctcgcaa tggagatatt
     4981 gagttatttt catcagataa tgaaatattt agtggtaaag atgatttaaa aaatgcagtt
     5041 gctaatttta atagtggcga taaaattcct acaaaaaatg aattatttac aaacgctaaa
     5101 aaaccaaaaa gggaaacatt aaattttgtt ttttcaatga aggatcattt gcaggctcca
     5161 gcaaataaaa ttcaagaggc tgctgtaaaa gttttaaagg aaaaattttc tgataactat
     5221 tttttagcag ccatacataa cgatacggac aatcctcact gccatatatg tttaaaaatt
     5281 acagatgctc atggaaaaag aattaatcct aaaaaatcag atctagacga gcttagaaaa
     5341 aattttgctt tagagcttaa ccgaatgaac atagacgcta ttgctactat tagaaaaaag
     5401 gtaaaaatcg ataaagatgg aaaagttatt gatgaacctg aaataaaatc acaccattat
     5461 gaagtaactg gatttggtga agcaccatat aaatttaatg cagataatga tcaaagttac
     5521 tatgtaaatt ataaaacacc aacaggaaaa attgttacca tttggagcaa ggatttaaaa
     5581 aaagttgttg aagataatca gattaatgtt ggagagtatt gtcgttttgc tattactgga
     5641 gagcaggaga tgaaatttgt ttatcttgat aaaaaaacaa aaaatacaat tgaaaaaaca
     5701 acttataaaa aaatgtggga cgtttctgta aatggtagat tggaaaaaga gttaaaacct
     5761 ttaaaaaaat attctatgcc aaccatcaaa attataaaga aatttaatgt agatgttaaa
     5821 caaaatatta ctcaagcggt agttaaacca aaaaatgata caattaagat tagccataat
     5881 ttgaatattc aaattaatga gaaaactcta taaaaatcag gaaaaaatgc aaaaatttat
     5941 aaaaacatta gataatataa tatcaaaaga acggcttagt tcatatagca gtatagatga
     6001 acattgtaaa aatttaagaa taatcgcaat acttactcca accatagcca tgatagagat
     6061 atctataaga aatattgttg atttttattt taagcagata tatggcacag agtggattaa
     6121 aaattcagtt catgaacaaa tactattaga aaaggagagt atagatagaa gatttaaatt
     6181 tgcagaacta tcacatgacc aatatttatc aaattttagc tttggaaaaa ttatatattt
     6241 agccaaagaa aatcatttac aaacatatat atttgaaaat ttaaatgagc tggattttag
     6301 ggattttagt gatagcaata gaaatttttt cttttttaat gatagaaaaa acgatttttc
     6361 cgatatagat aaagctgata ttttgttgag cctacttctt actattcgca atcgatgtta
     6421 ccattgggaa aatatactaa aaataagatc tgtcaataat caaacatatc caaggatcac
     6481 tcataggtta aataatacaa atataggtat tatgccaaaa gagttaaaga aatttctatc
     6541 tgatgttttg aataagttta taggaataat ttagagggat atgctatatc cctcaaggcg
     6601 tctagtccgc cactcgaagt atggataaat tctatcaaaa aaaaacttaa atgaatatta
     6661 tattatatct ttctctaata tgatatagta tagatctatc cttttaagtt ttcttataaa
     6721 aatgtgtaaa ttttagcata aacttaagcc aaaataacta atttaagctt agaaacctta
     6781 aattagttat ttttaaatca gtcaaatgct gtaaaattgg cactttgcta aatattgtat
     6841 tgaaaagtaa gattttcatt gattttgtgg cataatgtca agataatttc ttataaagga
     6901 aaaaatatga tacttgaaga aaaagtagaa ttattgacaa gcgttgtctt atatgatgat
     6961 aaaattgctc atttggtttt gtcgtgttct ttgggaattg gggcatataa tgctatattc
     7021 gatattatgg acaattttga taaaaagcct tttggttctt atgattttta tgatattgaa
     7081 agagaatttg aaaaaattgg cgtggatagg caaacattaa aacatatttt aattattttt
     7141 tatagtgaaa gaagattcat aaacacatta accaattatc taaaaacaaa ttatgaaagt
     7201 tttggaaatg tatcttatga gcttgaaact atgtataatg atcttgtagc aaatttacat
     7261 tagcaaggtc tatattttaa aagttttata atgtatataa gttataaaac ttttaaacat
     7321 tgtataagtt aaaaaacatt ataatacact tataaacatt ttttaggagt gtattatgga
     7381 aatagcagta gtgtcgaaaa agggtggtgt tggcaaaact ccttttgcgt tttctatcgc
     7441 aaaagatttg ggatatttct tacagtcaaa tgataactct tgtatcgagc agatttatcc
     7501 cggtaaagca aaaatactaa acaaagtcca aaacatagat aattgtgtat atgattttgg
     7561 aggtttcgtt gaaagtggcg tgctcgatgt cataaaaaaa tgctcggcgg ttgtcgtgcc
     7621 ttgcactcca acatataatg ctattttacg cacggtcgaa actatatcag aaatcgagcc
     7681 aataaacaaa aatatcatca tcattgccac aaattttaaa gatgataaag agcttgagtt
     7741 cttgcagtca aatttgaatg atcgatataa aaaactatct attttttact tcaaaaactc
     7801 caagatagtt aataatgcga ttaataccgg gctctctttt acagagctat ataatgaaaa
     7861 ttctctttca caaaaaagct atcatggctt ttttactgaa tacagcaaat tattacaaag
     7921 gataacagat ggcaagtaat ttaaatatga atatagatga cgtgcttaaa caaagcggca
     7981 accaaaaaac atacactgca gcagatcaaa aagaaaagag tataggcggt cgccctagaa
     8041 tagatgagag tgaaaaactg acaaaacaga ttagcttgta tctcaacgag ggtgaattcg
     8101 agtttttaac agaatacgca aaacgcaact atatgaataa aaattcagta gttcgcatgc
     8161 tgatcgctcg agccatggat gaatagatgt atataaatgt tttaaacatt tatatacatt
     8221 agataagtta tataatttat ataacttatc tttctaaatt tttaacttca attttgctct
     8281 caataatgct ctgagttcct gactttcttt ctttgtctag tctatctttt agttcaagcg
     8341 atcttgctgc aaaattgctt ttatattcct tgtttgcaga cattttatta agctctatgt
     8401 tgatagtctg ctcatctttt cgcaaagcct caagtagatt tagtctgcca tattccctat
     8461 tttctgaaat gatttgagca agacctttgt tgtttgcttt taattcgtta gctttcgcct
     8521 tgttcttatc gatactttct tccatgttgt tcatgtaatt gtttagtctg cgtaaaaaac
     8581 cagtataagg aatattttct tgtgttaaaa gattgttgcc ttgttggtta tacactaaat
     8641 ttgctggagc taaatgatcg ccagttttta ggctttccag ctcaaatact acagcgttta
     8701 gtgtcttttc gtaatatccg cttactttaa agcctttaaa atccataaag ctaacctctg
     8761 ccccatcttt tgccaagagc atatttagat tgtttctaaa agtgttttct agcttttctt
     8821 gagtggctct agtttcgttt gaagtatcgt cttttggtat ggtaattggc attatgtcta
     8881 gggcatcttt tgaattgatg taaaggttac atttgaagtc atcgctttta aactcatctc
     8941 gctggagtat tgcacgagaa attttttcat tttctttttc taaatactca atttttttga
     9001 tgttggcatc gagtgtttgc tcgtttctgt gtttttcctt gttaaattct ttgagtaaca
     9061 tttcctcttt atcgagggca gttttaattt ggatatgtgt tagcataagt ggattaccag
     9121 ttgctatcgc tttcatctca gccacacttg ctacatcctc atcaaagcca cttagggttc
     9181 tatctccgcc tattacgcct tttctaaaat ttacgatcga ttttgttttg ttttctatta
     9241 tctgccaaga aacggcatca tacgtttgtt ctgtaacata tctaaattct ttgatcttaa
     9301 aattttcagg gtctcgcata aatagttggt tgccttgcct tataactcga ccatttctct
     9361 gcacaaaatc tgaaggcttc catggcacat cgacatgatg tatggcagta actctttctt
     9421 gcacatttgt gccagctccc attttggctg ttgaaccaat taaaattcta acgtctccac
     9481 gattgacttt tccaaatagc tcgatctttt tggaattact gccatttgtg tcatgaataa
     9541 aagctatctc atctctagga atgccctttg ctacaagctt tttatataaa tctccatata
     9601 aaaagaacgt atcgttagag ctatcaatat cagcaatttc tgactcgtcg atactatcat
     9661 cgcttaatat gtcattgata tttgcaaact cttgctcttg tttgatttgt ggctcatttt
     9721 gggtattgtc tattgtaaga cttgctgagc tttgatttga ttttggtgtg cctatgtcta
     9781 aaaatactag ctgcgtcccc ttgtctgcct cccattcttt atactcttta tagatatttt
     9841 caacacaatt atttatcttt gattttggat catcggctgc gcctgggtca attaacctaa
     9901 agtctaagcc agccttttta gcatcacttg tgcatttgag atagttatcc tcagaaggat
     9961 catctggcat atgctccatt ctataaataa ttgagccctc gttaaaaaag ccgttaatgt
    10021 cttgaacgcc tatgaaattt gctacttgat ctgagcgtgg ggatatgctt ttgattatat
    10081 caacttcagg cacataatgt ttgtggtatt gtttgatatc atcgttggta acaatgtctg
    10141 caaaatttaa ataagaattt gctatttcag gtaaattttc aaactcacta aacctagtaa
    10201 ctggcttata tttttgtgct gaggcgtcta gctcaaaagt tgtatcgatc tttgcaaaag
    10261 tagctgccca agcatcaaaa gagtatatgc cttgagtttt tagctcatca ggtgctaaat
    10321 atttttgtat cgcataaagt tcagtaaggc tgttgcttac aggtgttcca gttaagaaaa
    10381 taaccttttt atcgttttcg tgtaaaaatg ttgttttttc aaatagattg atcgcttttg
    10441 ccgatccagc aggagagcca agccctttaa ctttgtcaag agatgttgaa aatggtaaat
    10501 tcttatacat gtggctttca tcaaccacta gacaatctat accaagatct gaaaaatcga
    10561 gcagctttgt tttgtctttg gtctcgagca atgttatcag ttttgtttct agattatcaa
    10621 ccctactttc tagtcttttg accgatattt tgctgccatt gttattttct tggttctctt
    10681 cttttagcct tatactctct cttagttctt cgatttgttc ctcgagcact ttttgagtaa
    10741 ttttaagtgg cactggcaac ctttctagtt gggagtgagt gattaaaatg gcatcatatt
    10801 cgccgtttgc tatttttgca aaaaattcat ctctattttc agggctagta gatttttcct
    10861 ctgctacaag tagatttgca tcaggatatg cgttcataaa ttcgctttcc cattgactta
    10921 ttaggtgatt tggaacggca attagcggct tatttataag ccctagcttc ttttgctcca
    10981 ttacagagca aatagatgag agtgttttgc ctgctccgac ttcgtggtca aatagacata
    11041 ctctttcgtt gattgccctt gcaaccgcat ctaattggtg ttttcgtaat gtatatgatt
    11101 tatttagtcc cttgatttct agcttttcac catcataatg ttttttaaca tagcagttaa
    11161 atttatcatt gtaaattttt gctaagtcat ttctccgctc tagatcatcc ataatccaat
    11221 cattaaatag attttttaaa ttctctacct tttgatttgc catttgtgta gcttcgacgt
    11281 ctgtaacttt tttaggaact acttctccat ttttgtttgt tacagtttct gtatcgctgt
    11341 cttttgttat tctgagactt cgtcgcatca atgctgcttc tgcgatagca aatgtgtcaa
    11401 tactttgcct gtggtttgag tgagtgtaag aaaaacgttt tctgttatat tcgctcatgg
    11461 catagtcatt gccagtaaaa gaccaagctc cagccctttc attatatttt aactgccaat
    11521 tttctttgct tataccaaat tgtttttcaa aaaactggtt atagtatttt aatggtatcc
    11581 aaggtgtgcc catagagact gaaatatcac tagcgtctat gtctattggc aaagctgctg
    11641 tcaatgcctt gacattgtga ttgagttctg tataagtttt ggctagttcg gttgctactt
    11701 ttagcttttc tttaacatta ccacttaaat atttaggagc aaattcatag atcgtttcgc
    11761 cagctgcaaa tttagttggg tctagaaaga ttagatcttt gcttgtaagc tctttgatga
    11821 tatcgcttgg attttggttg agttcttttg cgatatactc gatattaacc ttaccaaatt
    11881 tgttcatact tgcaaaaagc ccatttggcg cattgtcaaa ttttatatca gcctcagccc
    11941 tgatcgccct agtgtgtagt atacttgcct tttgagcatt ctcgtttctt gggcttatac
    12001 ccttttgtaa ggcttctttt gctgttactc ctttgtcgta gttagcttct agggatataa
    12061 ttttttgagc ctctacgtct tgtttgattg ccctattttt cctagaattg tgtaaaaagt
    12121 ctccactttt atgatattca tcatatagtt catttaactt tgtcctggca ttgacaagga
    12181 ttggatcact atctgcaata tcggtttttt caagcttaat tagttggttg taggtatcac
    12241 gcatttggat gaaagatgat actcgttttt catcgagctt gtttagctcg atctttctaa
    12301 caacaaattt atcattgctt tcgtagtttt tctcttttag gtagattgct ccgttaaatt
    12361 ttaggtagtt atttggttta agactatcaa aataagcctc attttgtttg tatataggat
    12421 catttttgtc tatatagacc aaattttgat ctacttcctg ctctttaaat ttgtagatat
    12481 tttttggtaa gttttcaaca aatagctcga gtgcatcttg taaatttaag tcttgttttt
    12541 cggtgcatac tagctcttcg ccatgtcgcc ctactttgat ttcaagattt cctagtatat
    12601 tttgtggatt ttgggcaaaa tactcattga tatagaattt gctatcattg aggtttttga
    12661 catttagcca atcttgattt agctcttttg atactccttt tttaaagatt acaatatcag
    12721 tattgacttc tgttccagca tttttaaatg cattatttgg cagtctaaca gccccaagaa
    12781 aagttgcttt ttctgcaata tattctcttg tttgactatc tttggcatct aaaaaatggc
    12841 tgctggttac aaatgccata ataccatcat cttttaatag ctcaatacct tttgctgcaa
    12901 agaaattatg aattgtagtt ccgttgagct ctttaaaatt tccatcataa attctagctt
    12961 gagagtatgg aggattgcct ataacggcat caaatctttt ttctgggcag tattcttcaa
    13021 agcccatatg caaatttaat tggtttggat atagcttttg acaaatttga tgagttagtt
    13081 catttagttc gatcgtggta aaatggtagt tattttgttt gttaaatcct aagaataatc
    13141 cagtgccaac actaggctct aatatctctt ttttgtgatc atcattatta agaccaagcc
    13201 tatcaaggct tttataaatt gtatcaatga ttatttttgg agtataaaat gagttttgag
    13261 tagaatttct agcttctgca aattcttggt cggtaagtaa ttgttttagc tcattatatt
    13321 ctttgttcca actttcattt tttggatcaa atacttgtgg cagcgcaccc cagcctgaaa
    13381 agccatttaa aatttcttgt tcctctttag ttgcatagat tgttttatct tgtagatgtt
    13441 ttggtggagt gatactgttt agttctttaa tgagttttat agcgttaaaa tttttgcgat
    13501 atttgtcttt tactccagca atgatgacct catttgacgg aatgaagtca tcatgtgagc
    13561 cagtgctagt tacatgataa acgctttctc tttgagaaat tgtaggctgt atggataatt
    13621 cctgtctctg cccattttca ttttctccag tgccattata tagccctgat atagattgat
    13681 gttggctgct ttgagaattt ccaaatccgt attcccctgc tctctcatct gtttggctaa
    13741 tggtgtcaaa aagacttcta gttccgtcat ttcttgctgt gccgctgcgt aacttagctc
    13801 cagccctgtt atattgagtg tctcctccga cattcccatt aattccagat gtctgcacca
    13861 cctgtgtatt atcattagtt gataatagct caatgtctga tatttcatgt atcgtctgcg
    13921 aatttccgcc aatgtggttt cgctcaatgt ccgatcgagc atattccaat ccacttgaaa
    13981 ctctatcggc tctatcccta tcccagcttc catgagctcc tctattctct gcattctgaa
    14041 gtagctctcg ccctgtgtct ccagtgtctc ttccattgtc gtttgtcctt tcttgggtta
    14101 cttcgtttaa tctttgattt atggcgtcca tttgagccaa gtttgcttga ctaaatagat
    14161 tgtcaaagcc ttcatcccat tgtttcttgc gttttggcat tttaatcctt taattgtatg
    14221 ttgcagatta aaatgttaga tgaatactaa cattttataa cttataaaac atttaaatac
    14281 atttaataag ttgtataact ttaataactt atctttctat atctttatga atttcttttt
    14341 tatgctcttg ttccgttttt actaggtagt cggtaaaatc aaatcctttt ttgatctcat
    14401 cctttgacca tttaaattgt gtaaatattt tttcccagtc taatatctcg acacttttgc
    14461 atgtatcttt tagctgttct ttgagtgctt ttgccccatt aataccagct tcatcatagt
    14521 cataacatat agtgattttt gtatctttaa aaagaggaat gtgccgctcc tcaaccagtg
    14581 cattggcaga gccaagcgta atggcattta agccttttgc aagagcgttt aggcagtcct
    14641 tttcgccttc cattataaaa ataggttcat tgctttcttt ggaggcagtg gcgtattgct
    14701 cgagtgatcc gatgtttaga ggagatcttt ttctgtttcc actaaacatt aactttggaa
    14761 gctgtatcat ttcgccattc tcaccaataa atggagtagg gtgcttgtta tatttccaga
    14821 gggtaacaca gttgccaaat tcatccttga tgggcataat aagtctatct cccttttttg
    14881 tgtagcctat ttcaaattgt ttggagattt tttctttttg ttcttttgtg gcagtcggca
    14941 tagtttggga gagtagttcc cagtatcgtt taaaattttc ctttctttct tgctggaatt
    15001 tatctatata gttttgagtg ataaacggtt gttctttaat atctgattgt tttgtatgtg
    15061 taaaatttga aaaattaata tcgatatctt gacctaaaat ttcttgtgcc tttttaaaag
    15121 cgttagcctt tgaatatccg tgaaaatcta ccattaaatc aatagctgat ccataccacc
    15181 cactgccaaa atctttaatt ttgccagttt ttccgtttat agatgcagac ggtgtagtat
    15241 catctaccct aattctaaat ttccatgatc gatcaatttc atatccaaga cccattaaaa
    15301 tttgggcagt ttcttctctg gtatggttca ttttattatg cactccgatt gtgttttaca
    15361 ggttatataa gttttatagt ttttataagt tatataactt gctttttctc gtctttttaa
    15421 aatttgtgcc aatacttttt tatgatagtt gttattggca gtcctgccgt tgtaacaatt
    15481 taacccttga taagtaaatc cgtgtctttt tagacatttt gaaagaattt tactggcaaa
    15541 ataaacgcta acttttggat tatataagtc atccagcgat aaatttacag cctcgatagc
    15601 ccctttgtgt atagaattta tctgcattag ccccatgtca atagtgccat ttgtattata
    15661 attaatggct tttgggtcaa aattgctttc gtgttttgca attccccaaa ggagctcatg
    15721 cggtatatta aaaagagctc catatttgaa aaaaagatca ttatattttg tgtcattagc
    15781 attggctacc aaacacacaa ataaagcaat aaaaacaagc cgcatttact ctgcctgcat
    15841 attatcttgg ctgtgttgtt cgtgttgctg tggctctttg tcgttgctat cttgcttttt
    15901 actatcaagc attaccattt tatctacaac tatgctgtgt ttgcttctag ctaatccatt
    15961 gttatctgtc cattgatcaa attttaatct gccgtctata aagacttttg agcctttttg
    16021 taggtattgg tttgcaatct ctgctgtttt acccataaag gtaatatcta taaagcacgt
    16081 ctcttctgtt ttctcgccat ttacgctaaa tttgtgtgtt gaagctatgg ctgtattgcc
    16141 tatagccatt cctgattgtg tgtatctgag ctcgatgtct cttgttaaat ttccgattac
    16201 ggatacgtag gtgtgcatgt attctccttt attatcttat tgtatttgtt gtgttctttt
    16261 gttatttgct aaaattgcgt tatttacata ctctactatt tcatttggtg gttcgctatt
    16321 tgaaaaacct ttaatttgtg ctaaataaaa tttatttctt tgtcgtctaa tctcaatcgt
    16381 atatctttca ttgtctcttc ttaaagaaca aataaaacac ttttgagcat ttactctttg
    16441 tatatatgaa gcaacgcagt tgtgattagc tatgctttct tccactatct cttttttggt
    16501 tgtaagcatt tttatatcac atggaagttt tagttttaaa aatgaatttt catcgcttat
    16561 tttaacttct ggtgcttttt ctattctgat atttagcatt aatctatcgt gttcggctct
    16621 taacctttta aatgatttaa tttttaaatt tatatttcct tcttgtgttg ttgccatatt
    16681 aacataatca cgaattattc cttcagcatt tgctt
//
LOCUS       DAPPKW010000034        16147 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.034, whole genome shotgun sequence.
ACCESSION   DAPPKW010000034 DAPPKW010000000
VERSION     DAPPKW010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 16147)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16147)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16147
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.034"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..788
                     /gene="nadC"
                     /locus_tag="RPW04_000992"
     CDS             <1..788
                     /gene="nadC"
                     /locus_tag="RPW04_000992"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HDX6295088.1"
                     /translation="DLSSSGDITSLAIFNDEKDSFYLICKSDGVLCGIDIFKKVFKFI
                     DENISVELYFKDGDAIKYADMVAKVSGSVINILQAERVAINFISYLSGIATKTSIFVK
                     ESKGNVKILDTRKTLPAYRMLAKYAVKCGGGENHRIGLYDMILIKDNHIDAAGGITNA
                     VTKIRQKYGNKFKIEVETRSLNEVKEALNLGIDMIMFDNMSLEMMREAVKIVSQKVFI
                     EASGNMSLDKIKKLADCGVDAISFGELTHSVKAFDFSLKKELI"
     gene            989..1819
                     /gene="purU"
                     /locus_tag="RPW04_000993"
     CDS             989..1819
                     /gene="purU"
                     /locus_tag="RPW04_000993"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HDX6295089.1"
                     /translation="MNYILKIDCYDEKGLILRVSEIVFKNGLNYVSTSEFVDHENERF
                     YMRAVMVGDINVCEFKNTLSAFLPKDAIIFCEEITKKDVVVLATKESHCLGDLLIKHS
                     SGELNANILAVIANHDTLRPLTEKFDIPFHFVSSDGISREEHENLVLNELKKYKFNYM
                     ILAKYMRILSSNFVKNYPKKIINIHHSFLPAFIGANPYKQAHERGVKIIGATAHFVTN
                     DLDEGPIITQDVIRVNHEMSWRDMQRAGKNVEKVVLSNALDLVFDERVFVYKNKTVIF
                     "
     gene            1820..2308
                     /locus_tag="RPW04_000994"
     CDS             1820..2308
                     /locus_tag="RPW04_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005869157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HDX6295090.1"
                     /translation="MFDIVLVRPEIHTNTGSIGRMCVNSGCRLHLIKPLGFMLDDKHL
                     KRAGLDYWDKLDLVIWESLDDFLTQNIKFKDRFFFATTKTNRLYFNTKFQKGDFLFFG
                     AEGSGLPLDLMKIKKENCITIPMSGDGRSLNLATSVGIITYEAIRQNINEFNFRDEIC
                     EF"
     gene            2296..3591
                     /locus_tag="RPW04_000995"
     CDS             2296..3591
                     /locus_tag="RPW04_000995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HDX6295091.1"
                     /translation="MRVLILLFIAIFSISAELKIATYNVENLFDDNIDGSEYKDFKDG
                     TWNTAKYIQKLNNISRVIKALDADFISVLEIENSSVLKQLAMKSGYKFYEFATNKNAP
                     VGLGVMSKYPILSSRKIVIPNLKTRPILVSEISFGGETIKFFSTHFPAAKNSLKDRKT
                     AANTMIKAVENEKNSIILGDLNSNYGYGFLLNDLNGEFKNLWEFVGNRDRSSYKKGGA
                     IDHIMLQNSFFNGNIRYKNSSFGVFKPSFLSSGKFSDHYAIYAVLTSEFRDSPVFKKS
                     IDEIYAVSDERAEVVGVVIYVDKFGYILADKSRRGIYVYEKNPKLPLGTKVEAIVNKT
                     DLYKGNMQISSISYKNVDTAFDTDISKFMISQDEIKSARSGDVVSNLKIDVKDGFTSI
                     NGEKLRVFSRSKKIKNGQNLVYKNALVWSYKGEKELVVE"
     gene            3578..3766
                     /locus_tag="RPW04_000996"
     CDS             3578..3766
                     /locus_tag="RPW04_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002816646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295092.1"
                     /translation="MLLSDFFNFLVWVLLVFLIFVLVVGFNRQMMEKNRLRDEQIAKR
                     KEAKGKNEDKIDDNNSSN"
     gene            3873..5888
                     /locus_tag="RPW04_000997"
     CDS             3873..5888
                     /locus_tag="RPW04_000997"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016647239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HDX6295093.1"
                     /translation="MKLLIEIGVEELPAIPFLRELNNIKPKWKQVLDEYGLDSKFNLE
                     YTPRRIVINGDIPELTPDLEVENIGAPKSVALQDGKWNAAALGFAKKCGISQDELGFK
                     EIKGKEVLYHKSVIKGKLVSDLLPAMIEKFILSLNFGKSMRWGNGEYEFIRPIRSLIS
                     ILGEKSLDFEIFGVKSKKAFYPHRNFGYDMIDFSSIDEYFELVRKNGIILSATQRKEK
                     ILDEFKTIETKNNLKIELDFDLLDEVVAITEYPTALLGSFEKEFLEVPSEVIITSMKE
                     NQRYFPLHNADGKLSNHFVVVSNAITDDHNLIIRGNEKVLRARLSDAKFFWHSDLASE
                     FSSEKLKNITYLNELGSMYDKELRERQIARILASIYDKDLRYEFGGDYADELDRAVML
                     SKADLTTNMVYEFTNLQGVMGGYYAAYRDENPFIIGAIKEQYLPNANLYPKTLFSSLV
                     AISNKLDTLMGLFSIGKIPSGNKDPYALRRAASGIIKIVLNLGINFDLRNILNLIKPN
                     YKNFDLNYLESFVYERLYSIYDVNPSVIKACLNSSQSDLKRLNAAIIALDEICKMKDF
                     KDNFSTFKRLSNIIKDSEIAEVNESLFEEDVENELNNKFKALNLNIDDTKTYLESLFG
                     LKNSIDLFFDSVMINHDNPKIKANRISIIGQIYKAFLKVADIKEISA"
     gene            5885..6973
                     /locus_tag="RPW04_000998"
     CDS             5885..6973
                     /locus_tag="RPW04_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDX6295094.1"
                     /translation="MSENPRYLKEQLITYLGNKRSLLGFIEAGIKGVKQDIKKDKVSF
                     ADIFSGSGIVARMARAHSHTIYTNDLELYSKVINECYQTNYSDELNEKLDFYYHKLSD
                     IKDLKRGFITSLYAPKDENDIKKDDRVFFTLKNAMIIDTLRTAIDEIVPDELRVFFLA
                     PLLSEVSVHSNTSGVFKGFYKNKLGIGEFGGNGKNALKRIMSDITLKKPVLSNFKCDS
                     YVAQKDALEFAKDMQEVDIAYLDPPYNQHPYGSNYFMLNLIAKYEKPKDISLVSGIPK
                     QWNRSVYNKKRDACSAFFELINNLKSKYLLISFNNEGFIDKDEFITNLSKIGRVELKE
                     QKYNAFRGSRNLNGRDLHVFEQLYWVKK"
     gene            complement(7009..7410)
                     /locus_tag="RPW04_000999"
     CDS             complement(7009..7410)
                     /locus_tag="RPW04_000999"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295095.1"
                     /translation="MKIYIYILLLIFTGCSAKNNAQHNIAVAAQNDNIKEVVQEPQSQ
                     NIEVDYMNFDEQNRQDIMLAYGTLLDDANVNAWAKGTEANLVGKILISQATFNKIANE
                     ISQYIRDFRKIDGKISIYYQVKEKVVYQGKY"
     gene            complement(7407..7673)
                     /locus_tag="RPW04_001000"
     CDS             complement(7407..7673)
                     /locus_tag="RPW04_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011992178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase"
                     /protein_id="HDX6295096.1"
                     /translation="MQNVGNKISNKLLDLEFQRKSAKIALSASLGILTITAFNMKNKK
                     AAKLHTIAGAAMVGFSLWHAGLYGTKYAKFLNKHSKKRLKASEV"
     gene            complement(7654..9080)
                     /locus_tag="RPW04_001001"
                     /pseudo
     CDS             complement(7654..9080)
                     /locus_tag="RPW04_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731972.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
     gene            complement(9149..11224)
                     /locus_tag="RPW04_001002"
     CDS             complement(9149..11224)
                     /locus_tag="RPW04_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HDX6295097.1"
                     /translation="MPKNSLKIASHVNNRVRFICNELNEFIDERNLEAEILKLEDVLN
                     ARVNKAAKSIIITYSRNLKNIIQDISNIQISTLKSIKNAPSKAEIYKSAAILALTSIN
                     KNKFINIAATLAGSKELFKEGAYELLHEGLTSKTLEALAVGVSLARGDYSAANGTNLL
                     LNLGEYIEESTVHKSDDLIKELARPNVKEAWIEVIGNGKKELKLINAKDIKIGDIVVV
                     STGESIAIDGYIVEGSASINQVSMTGEAEPVKKERGDRVMSGTIVEEGRIKIWAELIG
                     DETATSRIKKYIQASLNEKSSIGLKATKLADKLVPVTLGLAGLSYIINKNTMAMASVL
                     QADYSCALKLATPVAFKTSISKAGRDGILIKGAKAIEALANADTFVFDKTGTLTYGNL
                     SVAEIYSFDEGINSDELLNLTASAEEHYFHPVAEAIVKAARQRGFHHIHHEEVEFIVA
                     HGVKTVVKGKEVVIGSRHFLEDDEMIDFSAHKSKLEESIKSGFAMLYIGYDKKLIGTI
                     ALKDEIRDNAKECIEKLKEYGVKEIIMLTGDVQNKADEVAKSIGVDKVFANCLPTDKA
                     QIIENLRKSGKNIAFIGDGINDAPSLVKSNVGISMSKGADIAKASADISLLKDDICSV
                     AKAKLIANKTMEKINLNFKATVGINSGILLGATLGKLSPIQTAVLHNGTTIALLLNSL
                     NSADINQNY"
     gene            complement(11211..11498)
                     /locus_tag="RPW04_001003"
     CDS             complement(11211..11498)
                     /locus_tag="RPW04_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HDX6295098.1"
                     /translation="MTNPYINNQNTDKSAINETINNLTKDIPFIPDNFNTAGFLKGVL
                     LGAGITYLLTNQNAQQTLFKAIVKATNLLQSGTEELKERFEDAKAEVNAQK"
     gene            complement(11495..11797)
                     /locus_tag="RPW04_001004"
     CDS             complement(11495..11797)
                     /locus_tag="RPW04_001004"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys/Met metabolism pyridoxal-phosphate-dependent
                     enzyme"
                     /protein_id="HDX6295099.1"
                     /translation="MNNSLFSTSRLPADNFLSGSLIGFIASSAISLNQVKDGQIDTKT
                     AMKKVLKISIESGIAAGFGIWASNDVVQGKYINAAIKVAAGLSMIKATNSILKENK"
     gene            complement(11830..12123)
                     /locus_tag="RPW04_001005"
     CDS             complement(11830..12123)
                     /locus_tag="RPW04_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295100.1"
                     /translation="MNNISNKGFKMALPFLAGALVGGLAIYAFNNRKAIQNSLLTGLD
                     KGKEIAKKAKDSSLKVVKLENLSSEKPVKTRKPRKPQAKKAPQTDQNKQDFEI"
     gene            complement(12116..12751)
                     /locus_tag="RPW04_001006"
     CDS             complement(12116..12751)
                     /locus_tag="RPW04_001006"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295101.1"
                     /translation="MQIKFDNYSKEEIYNLAFNYENRGILIYSNFVDTEIFNQILSIK
                     KSGLELLKNLADEKNYSINLNECEVLNPKDNFEKLIVAINYELEINEFYKNASEFMDD
                     DVKDLFFRLWATSNNEYIPALKASLLSISCQNLAPNIQNSNQNNTDPKSNNSIKDFLE
                     EANKIASGEANMENINTLLNHPSFPFFSGVAAGGLIGLLINEIIKKEKIDE"
     gene            complement(12741..13064)
                     /locus_tag="RPW04_001007"
     CDS             complement(12741..13064)
                     /locus_tag="RPW04_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295102.1"
                     /translation="MSSNLKILNEILPYFSLIHSVPGRLRVRVSPRIKELQSNIGLDE
                     IDKIIAKIDGINSVKFNKLVGSVTVLYDQNKFPEHLWNDMLNGQNLEHISKKIEEIKR
                     SCSAN"
     gene            13247..13456
                     /locus_tag="RPW04_001008"
     CDS             13247..13456
                     /locus_tag="RPW04_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295103.1"
                     /translation="MSYDELELEAMIQEVLEDCGDFENLDDEELFELIEKIKELTDGD
                     TEEAYEHLNGYSPISRKRFMSLYSV"
     gene            13524..14333
                     /locus_tag="RPW04_001009"
     CDS             13524..14333
                     /locus_tag="RPW04_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016647237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HDX6295104.1"
                     /translation="MQRFLLILLLFITAAFSATIGNGETQIISIESQYAGKLTANDKK
                     ISWIDHPLKPGFKIAFVPASYYETKNINVKNSLDGEMGITEFELVKKDYKQEKITVSE
                     SKVKPPQSVMKRIDKERREAQQIYKTVSKGLFFNDKFISPMNSFITSDFGTARVFNGL
                     IKSYHGGTDFRAAVGESVMAANSGIVKIAKDRYYAGKSVVIDHGSGIYTQYYHLSDII
                     VKVGQKVNKGDILGLSGDSGRVSGPHLHFGVIINNVQVNPLDFISKINMVL"
     gene            14397..14819
                     /locus_tag="RPW04_001010"
     CDS             14397..14819
                     /locus_tag="RPW04_001010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295105.1"
                     /translation="MKSKILSAALVTAVLSSFAFGANDKAIELSNKIFAVKKDASAKE
                     LIIRDACFKIHNEMLEVTKNMTPDQRDDFNKEFRMQMRKNMATLGKDEYFNPAVCRSV
                     MKKHNRNYGMRNPGMGNPGMGMGGGYNCQSNADCPYNQ"
     gene            14820..15488
                     /locus_tag="RPW04_001011"
     CDS             14820..15488
                     /locus_tag="RPW04_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDX6295106.1"
                     /translation="MSKILVLEDEPMLQDMISSYLQSFGYEVEASDSYDKALSIAYEK
                     NFDLFIFDVKIIGGSGFELLDELRSSGVATPCIFATSLNGINDVTKGFKVGCDDYIKK
                     PFELAELLLRVQNILKRNFNHYVDDNFIIINSNFKFDILQKKLMQDGKVLPLAKKETE
                     LLCLFLKNKNRILSRDEIYSQIWEFDEVPSELSLRVYIRNLRKLIGNEKIISHSKLGY
                     EYVS"
     gene            15478..>16147
                     /locus_tag="RPW04_001012"
     CDS             15478..>16147
                     /locus_tag="RPW04_001012"
                     /inference="COORDINATES: protein motif:HMM:NF012722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDX6295107.1"
                     /translation="MSHKKYILPIFLLYTITSMLFLLFFAVSYYKEAKNDIYEKTVKD
                     LRAYANEIEYMLRINGGIGEILDLKSEYDINLYDIRSKRYVLKNFDRPIYNGRYYVDD
                     EFMYYSDDIHTKRRTIELNLELRTQSPHASINRLFVKISMISIIVLLAISVIAYFIVK
                     LSYLPLLNQIKTLNNFITDTTHEINTPLSVILMSVEMFDKNPSKYLENIKIASKTLSN
                     LYNDL"
BASE COUNT         5453 a         2346 c         2781 g         5567 t
ORIGIN      
        1 aggatttaag tagtagcgga gatattacta gtttagctat ttttaatgat gaaaaagata
       61 gtttttattt gatttgtaaa tctgatggtg tgctttgcgg tatagatata tttaaaaaag
      121 tttttaaatt tatagatgaa aatatctctg tggaactgta tttcaaagac ggtgatgcga
      181 taaaatacgc agatatggta gcaaaagtat caggaagcgt gataaacatt ttacaagccg
      241 aaagagtagc tataaatttc ataagctatc tctctggcat agctacaaaa acctctattt
      301 tcgtaaaaga atccaaaggc aatgtaaaaa tactagacac tagaaaaacg cttcctgctt
      361 atagaatgtt agcaaaatac gccgtaaaat gcggcggcgg agaaaatcat agaatagggc
      421 tatacgatat gattttaatc aaagacaatc atatagacgc agcaggaggc atcactaacg
      481 cggttactaa aatacgccaa aaatatggaa ataaatttaa aatagaagta gaaacaagaa
      541 gtttaaatga agtaaaagag gctttaaatt taggtataga tatgattatg tttgataata
      601 tgagtttaga aatgatgaga gaggctgtta aaattgtatc tcaaaaagtc tttatagaag
      661 cttctggaaa tatgagttta gataagataa aaaagcttgc agattgtggt gtagacgcta
      721 tttcttttgg tgaactaaca catagcgtta aagcttttga tttttctttg aaaaaagaac
      781 tcatataaaa taaatcaaat ttaagtctta taaaagtcaa taatacactc aaaatcaata
      841 cttaaaggct tcaaaaatat tactagcatc gcgtaattat gatattttat ttacaattgt
      901 attttagata gtcttgttta tggataatct attttttagt aaaaaaattg tataatctac
      961 gcaatttttt taaatttttg gagcgggtgt gaattatatt ttaaaaattg attgttatga
     1021 tgaaaagggt ctaatactaa gagttagcga gatagttttt aaaaatggtc taaattatgt
     1081 tagtacaagt gagtttgttg atcatgaaaa tgaacgattt tatatgcgtg ctgtgatggt
     1141 gggcgatata aatgtttgtg agtttaagaa tacattaagt gcttttttac ctaaagatgc
     1201 gattatattt tgtgaagaga taactaaaaa agatgttgtt gtactagcta caaaagagag
     1261 ccactgctta ggagatttac tgataaaaca tagtagcggt gagttaaacg caaacattct
     1321 tgcagtcata gcaaatcacg acactttgag acctcttact gaaaaatttg atattccttt
     1381 tcattttgtt agttcagatg ggattagcag agaagaacat gaaaatttag ttttaaacga
     1441 attgaaaaaa tacaaattta attatatgat tttagcaaaa tatatgcgaa ttctaagctc
     1501 gaatttcgta aaaaattatc ctaaaaaaat tataaatatt catcactcat ttttaccggc
     1561 ttttatagga gcaaatcctt ataaacaggc tcatgaaaga ggagtaaaga tcatcggagc
     1621 aacggctcat tttgttacta atgatcttga tgaaggacct atcattactc aagatgttat
     1681 aagagtaaat catgaaatga gctggcgtga tatgcaaaga gcaggtaaaa atgtagaaaa
     1741 agtcgtactt tcaaatgcgc ttgatcttgt ttttgatgag agggtttttg tttataaaaa
     1801 taaaacggtg attttttaga tgtttgatat agttttggtt cgaccagaaa ttcatacgaa
     1861 taccggaagc ataggaagaa tgtgcgtgaa ttcaggttgc agacttcatc ttataaagcc
     1921 gcttggattt atgcttgatg ataagcattt aaagcgtgcc gggcttgatt attgggataa
     1981 attggatctt gttatttggg agagtttgga tgatttttta actcaaaata tcaaatttaa
     2041 agatagattt ttctttgcta ctactaaaac aaataggctc tattttaaca ctaaattcca
     2101 aaaaggagat tttctatttt ttggtgccga gggatctgga ttgccgcttg atttaatgaa
     2161 aataaaaaaa gaaaactgta tcacgatacc gatgagcggt gatggaagaa gtttaaattt
     2221 agctactagc gtaggaatta taacttatga agcgatacgc caaaatataa acgagtttaa
     2281 ttttagggat gaaatttgcg agttttaatc ctacttttta tagctatttt ttctatttca
     2341 gctgaactta agatagcgac ttataacgta gaaaatcttt ttgatgataa tatagacggg
     2401 agcgaatata aagatttcaa agatggaaca tggaatacgg ctaaatatat tcaaaaatta
     2461 aataatattt cgcgagtgat aaaagcgcta gatgcggatt ttatttctgt attagagata
     2521 gaaaatagct ctgttttaaa gcagttggct atgaaaagcg ggtataaatt ttatgagttt
     2581 gctacaaata aaaatgctcc cgtaggactt ggagtaatgt cgaaatatcc tattttaagt
     2641 agccgaaaaa tcgtaattcc aaatttaaaa accagaccta ttttagtaag cgagataagt
     2701 tttggaggtg agacaataaa gtttttctca actcatttcc cggcagcaaa aaatagttta
     2761 aaagatagaa aaacagctgc aaatactatg ataaaagcag tcgaaaatga aaaaaacagt
     2821 ataattttag gcgacttaaa tagtaattat ggatatggat ttttgctaaa tgatttaaac
     2881 ggagaattta aaaatctctg ggaatttgta ggaaacagag atagaagttc atataaaaaa
     2941 ggtggcgcta tagatcacat aatgcttcaa aatagctttt ttaacggaaa tattagatac
     3001 aaaaactcta gttttggcgt attcaagcca agttttttat ctagcgggaa gttctccgat
     3061 cattacgcta tttatgcggt attaacttca gaatttagag attcacccgt ttttaaaaaa
     3121 agtatagatg aaatttatgc agtgagcgat gagagggcag aggtcgtcgg agtagttatt
     3181 tacgttgata aatttggtta tattttggct gataaaagta gaagaggtat atacgtatat
     3241 gaaaaaaatc caaaacttcc acttggcacg aaggttgaag ctatagtaaa taaaacagat
     3301 ctttataaag gaaatatgca gatttctagc atatcgtata aaaacgtaga tactgctttt
     3361 gatactgata taagcaaatt tatgataagt caagatgaga taaaaagcgc taggagcggc
     3421 gatgttgttt caaatttgaa gatagatgta aaagatggtt ttacatctat caacggtgag
     3481 aaattaagag tatttagtcg ctctaaaaag ataaaaaacg ggcaaaattt agtttataaa
     3541 aatgcgttag tttggagtta taaaggcgag aaggagcttg ttgttgagtg atttttttaa
     3601 ttttttagtt tgggttttgc ttgtattttt gatatttgtt ttagttgtag gatttaatcg
     3661 tcaaatgatg gaaaaaaatc gtctcagaga tgaacaaata gcaaaaagga aagaagcaaa
     3721 aggtaaaaat gaagataaaa tagatgataa taactcatca aattagttaa atatagttaa
     3781 aacagagtta ttttatgaaa atatcaactt ttgtttgttt gagtttaaaa gcttgttact
     3841 aaaataggct gatattataa ggagaaaaaa agatgaagct attgattgaa atcggcgttg
     3901 aagagttgcc ggcaatccct tttttaaggg aattaaataa tataaaacca aaatggaagc
     3961 aagttttaga cgaatacgga cttgatagca aattcaacct tgaatatact ccaagaagaa
     4021 tcgtgataaa cggcgatata ccagaactta cgcctgattt agaagttgaa aatataggag
     4081 ctccaaaaag cgttgctctg caagacggta aatggaacgc ggctgctttg ggatttgcta
     4141 agaagtgtgg cataagtcaa gatgagcttg gttttaaaga gattaaaggt aaagaggttt
     4201 tatatcataa aagcgttata aaaggtaagc ttgtttctga tttactgcct gctatgatag
     4261 agaaatttat attatcttta aatttcggga aaagtatgag atggggaaac ggcgaatatg
     4321 agtttatacg ccctatacgc tcattaatat ctattttagg tgaaaaaagc ttggattttg
     4381 aaatttttgg agttaagagt aaaaaagcgt tttatccaca tagaaatttc ggttatgata
     4441 tgatagattt ttctagtata gatgagtatt ttgagcttgt gcgaaaaaat ggaattatac
     4501 taagcgctac tcagagaaaa gagaaaattt tagacgaatt taagactatt gagactaaaa
     4561 ataacctgaa aatagagctt gattttgatc ttttagatga agttgtagct ataacagagt
     4621 atccaacggc actcttaggt agttttgaaa aagagttttt agaggttcct agcgaagtta
     4681 ttatcacttc aatgaaggaa aatcaacgct attttccttt gcataatgca gatggaaaac
     4741 ttagcaatca ttttgtagta gtaagcaacg ctattacaga tgaccataat ttaataataa
     4801 gaggaaatga aaaagtctta agagcaagat taagcgatgc taagtttttt tggcatagtg
     4861 atttagctag cgagtttagt agtgaaaagc taaaaaatat cacttatcta aatgagttag
     4921 gcagtatgta cgataaagaa ctcagagaga gacaaatcgc tagaatttta gctagtatct
     4981 acgataagga tttaagatat gagtttggtg gagattacgc tgatgaactt gatagggctg
     5041 tcatgcttag caaagccgat cttactacta atatggttta tgaatttaca aatctccaag
     5101 gagtaatggg tgggtattac gctgcatata gagacgaaaa tccgtttata ataggcgcta
     5161 tcaaagagca gtatttgcca aacgcaaatt tatatccaaa aactctattt tcaagtttag
     5221 tggcgatatc aaacaaactt gatactttaa tggggctttt tagtataggt aagataccaa
     5281 gcggaaataa agatccatac gcattaagaa gagcggctag cggaattata aaaatagtac
     5341 taaatttagg tataaatttt gatttgagaa atattttaaa tttaataaaa ccaaattata
     5401 aaaattttga tttaaactat cttgaaagtt ttgtatatga aagactttat agcatttacg
     5461 atgttaaccc ttctgttata aaagcgtgtt taaatagctc acagagtgac ttgaaaagat
     5521 taaatgcagc cataattgca cttgatgaaa tatgcaaaat gaaggatttt aaagataatt
     5581 tctctacatt taaacgactg tctaatatta taaaagatag cgagattgca gaagtaaatg
     5641 agagtttatt tgaagaagac gtggaaaatg aattaaacaa taaatttaaa gctctaaatt
     5701 taaatataga cgatacaaaa acatatcttg agagtttgtt tggattaaaa aacagtattg
     5761 atcttttctt cgactctgtg atgataaatc acgataatcc aaaaataaaa gctaatagaa
     5821 tctccattat aggtcaaatt tataaagcat ttttaaaagt ggctgatata aaggaaatta
     5881 gcgcttgagt gaaaatccac gctatttaaa agagcaacta ataacttatc ttggaaataa
     5941 acgttccttg ctaggtttta tagaagctgg tataaaaggt gtaaagcaag atataaaaaa
     6001 agataaagtt agttttgcag atatttttag cggctctggc atcgtagcac gaatggctag
     6061 agcccattcg catacgatat atacaaatga tcttgagttg tattcaaaag ttataaatga
     6121 gtgctatcaa acaaattata gcgatgaact aaatgaaaaa cttgattttt attatcataa
     6181 attaagcgat ataaaagatt taaaaagagg gtttataaca tctttatatg ctccaaaaga
     6241 tgaaaatgat atcaaaaaag acgacagggt attttttact cttaaaaatg cgatgattat
     6301 agatacttta agaactgcta tagatgagat agttccagat gaattaaggg tatttttctt
     6361 agctccgctt ctttctgaag taagcgttca tagtaatact agtggtgttt ttaagggatt
     6421 ttataaaaat aaacttggaa taggcgagtt tggaggaaac ggaaaaaacg ctcttaaaag
     6481 gataatgagc gatataactt tgaaaaaacc tgtgctttcg aattttaaat gcgactcata
     6541 tgttgcccaa aaagacgcct tagagtttgc taaagatatg caagaagtag atattgctta
     6601 ccttgatcct ccatacaatc aacatcctta tggctcaaac tattttatgt taaatttaat
     6661 agcaaaatat gaaaaaccaa aagatataag cttagtgagc ggtattccaa aacagtggaa
     6721 tagaagcgtt tataataaaa aaagagatgc ttgttcggca ttttttgagc ttataaataa
     6781 tttaaaatca aagtatctgt tgatatcgtt taacaatgaa ggtttcatag ataaagatga
     6841 gtttataacg aatttatcaa agataggtag agttgagtta aaagagcaga aatacaacgc
     6901 ttttcgcggt agtagaaatt taaacggcag agatttacat gtatttgagc agctttattg
     6961 ggtaaaaaaa taatagctta tcttatcttt ttatctcaaa aaaacagctc aatactttcc
     7021 ttgatataca actttttctt taacttgata atatatgctg attttaccat caattttgcg
     7081 aaaatccctt atgtactgtg aaatttcatt tgctatttta ttaaacgtag cttgacttat
     7141 aaggatttta ccgactaaat ttgcttctgt gcctttagcc catgcattta catttgcatc
     7201 atctagaagc gttccataag ctaacattat atcttgtcta ttttgctcat cgaagttcat
     7261 ataatcaact tcgatatttt gcgattgagg ctcttgtaca acttctttta tattatcatt
     7321 ttgtgcggcg actgctatat tgtgctgagc attgttttta gcagaacagc cagtaaatat
     7381 aagaagcaag atatatatgt agattttcat acttcgcttg cctttagacg ttttttacta
     7441 tgcttgttta aaaatttagc atattttgtc ccataaagac cggcgtgcca tagactaaat
     7501 cccaccattg cggcacctgc tatagtatgg agttttgccg cttttttatt tttcatatta
     7561 aaagccgtta tagtaagtat gccaagacta gcgcttaaag ctattttggc tgattttctt
     7621 tgaaactcta agtctaagag tttgtttgat attttattcc caacattctg cattttttat
     7681 acctaattcc ttagctttaa aaacaggttc ttttcctgct tttttctgta ttatatagtc
     7741 tcgaagcgtt actttaacta tattagataa aaatagtatt gccaatatat ttaaagtcgc
     7801 catacctgcc ataagtatat ctgctaaact ccaagctatg gttaagttca tttgagctcc
     7861 tataaatacc atcgctacag cagaaacttt aaataaaaac ataattatcc tattatttgt
     7921 taaatatttt atatttgctt gagcgtaata gtaatttcct ataagagatg ttatggcaaa
     7981 taatgcaata gctgccgata cgaagtgtaa tcctatatct ccgaaatact cttgcatagc
     8041 ttgttgtacg agaggaagcg ctgttagttc ttgtcctttt tctataaatt tagtagaaaa
     8101 tagcactaaa aacgctgtac tagtacatat aaatacatct ataaataccg caaaactttg
     8161 tactaatcct tgttttgcag ggtggctagt atgggcagca gcagctgcat ttggcgccga
     8221 gcccatacct gcttcatttg aaaaaagtcc tctttttatg cctattgcaa ttgcagatcc
     8281 ggcaaaacct ccaaaaatag ctttaaaatc aaacgcttct ttaaatataa gcgtcaaaac
     8341 ttcaggtatt ttttcatagt ttaaaattat ggcgattact gctaaaagag tatatgcgat
     8401 agccatataa ggcacaataa tagagctaac tttacctatg gtgtaacttt tgctaaaaaa
     8461 taaaatagta gttataattg ttaaaataat tcctatatag atagttattc cgctattttt
     8521 aaactcttcc caggtggttg ccggagtgta aatttgaaaa gctgaagtca tggtataact
     8581 ttgtaatccg ttaaaaccgt aggcgtaagt aagtattagt ataattgcaa ataaagtgcc
     8641 tatgcgtttc atacctaaag cttttgttat atagtatgcg ggtccgcctt tgaatccatt
     8701 tccatctttg cttttataaa tttgagctaa cgtactttct gcaaatgcgc ttgctccgcc
     8761 aaaaaatgcc attgcccaca tccaaaatat agctccggct ccacctactg tgatggcaaa
     8821 agcgattcca gctatatttc ctatgccgac tctactggcg gtgatatcat aagtgcttga
     8881 aaagggctta tatgttcagg atgcaagaca tcgctatcta ctttttccgt tactgcttta
     8941 aggctttcta tgaacatccc aatctgtaca aatccaaatt taaaacttag gaaaatacct
     9001 acaaaaacaa gcaggacaac aagataatat gtatataacc agtcattaag gttatctagt
     9061 aaagagatta taaaattcat taaagtctcc tatatattaa tattttatta tatcttacaa
     9121 aatattaata tgctataaaa ttataaaact aataattttg atttatatct gcactattta
     9181 gtgagtttaa aagcaatgct atggtagttc cgttatgtaa aacagcggtt tgtataggac
     9241 ttagtttgcc aagagttgca ccaagcagta ttcctgagtt tatacctact gttgctttga
     9301 aatttaaatt tatcttttcc atagttttat ttgctattag ttttgccttt gctactgagc
     9361 atatatcgtc ttttaaaaga cttatatcag cgcttgcttt tgctatatca gcacctttgc
     9421 tcatgcttat tccgacattt gacttcacta gacttggagc gtcgtttata ccgtctccta
     9481 tgaatgctat attctttccg ctttttctta aattttcaat aatttgtgct ttatccgtag
     9541 gtaagcaatt tgcaaatacc ttgtctacac cgatactttt tgctacttca tcggctttgt
     9601 tttgtacatc tcctgttagc attattatct cttttacgcc gtactctttt aatttctcta
     9661 tgcactcttt tgcattgtct cttatctcgt cttttagagc tattgtacct attaattttt
     9721 tatcgtatcc tatatatagc atagcaaatc cgcttttgat actctcttca agctttgatt
     9781 tatgagcaga aaaatctatc atttcatcat cttcaagaaa gtgcctgctt cctataacta
     9841 cttcttttcc ttttaccacc gtttttacac cgtgagctac tatgaactct acttcttcat
     9901 ggtgtatgtg atgaaaacct ctttgccttg ctgctttgac tatagcttcg gctactgggt
     9961 gaaagtagtg ctcttctgca cttgctgtta aatttaacag ttcatccgaa ttaattcctt
    10021 catcaaaact ataaatttcg gctacgctta aatttccgta tgtaagagtt cctgttttat
    10081 caaaaacaaa tgtatctgca tttgctagag cttctattgc ttttgctcct tttatcaaga
    10141 taccatcacg tccagctttg cttatacttg ttttaaaggc tactggcgtt gctaatttca
    10201 gagcgcatga atagtctgct tgcagcaccg aagccatagc catcgtattt ttatttatta
    10261 tataactaag accggctagt ccaagagtta ctggtactaa tttatctgca agtttcgtag
    10321 cttttaaccc tattgatgat ttctcgttta agcttgcttg aatgtatttt tttatgcgac
    10381 tagtggcagt ttcatcgcct ataagttctg cccatatttt tatacgtcct tcttcaacta
    10441 tagttccgct cataactcta tcgccacgct cttttttgac cggttctgct tctcctgtca
    10501 tgctcacttg atttatgcta gcacttcctt ctacgatata tccgtctata gctatgctct
    10561 caccagtaga tactactact atatctccta tttttatatc ttttgcattt atgagcttga
    10621 gctctttttt gccattacct atcacttcta tccacgcctc ttttacattt ggacgtgcta
    10681 attcttttat tagatcatca cttttatgta ccgtactttc ttctatgtat tcacctaaat
    10741 ttaaaaggag attcgtaccg tttgcagctg agtaatctcc tcttgcgagg ctgactccaa
    10801 cagccaacgc ttcaagagtc ttacttgtaa gcccttcgtg aagtaactca taagcgcctt
    10861 ctttaaaaag ttctttagag cctgcaagag tagctgctat gtttataaat ttatttttat
    10921 ttatactagt taaggctaat atcgctgctg atttataaat ttcagctttg cttggagcat
    10981 tttttatact ttttaaagtt gaaatttgta tgttactgat atcttgtatt atatttttta
    11041 aatttcgact ataagttatt ataatgcttt ttgcggcttt atttactctt gcgtttagaa
    11101 catcttctaa ctttaaaatt tcagcttcaa gatttctctc atcgataaat tcgtttagtt
    11161 cgttgcagat aaatctaact ctgttattta cgtgactggc tatttttaga ctatttttgg
    11221 gcattgactt cagctttggc atcttcaaat ctctctttta actcttcggt accgctttgt
    11281 aataaatttg tggcttttac tatcgcttta aatagtgttt gctgcgcatt ttggtttgtt
    11341 aaaagatatg tgattccagc acctagcaat actcctttta aaaatcctgc cgtattaaag
    11401 ttatctggta taaatggaat atcttttgtt aagttattta tagtttcatt tatagctgat
    11461 ttgtctgtgt tttggttgtt aatgtatgga tttgtcattt gttttccttt aaaatactat
    11521 ttgttgcttt tatcatagat aatccagcag ctacttttat agccgcattt atatattttc
    11581 cttgtactac gtcatttgac gcccatatcc caaatccggc ggcgataccg ctttcaatac
    11641 taatttttaa aacttttttc atggcggttt ttgtatctat ttgaccatct tttacttgat
    11701 ttaaagagat ggcgctagat gctataaaac ctatcaagga accgctaaga aaattatccg
    11761 caggtagtct cgaagtagaa aataaactgt tattcatatt ttaaattcct tctaaatcta
    11821 tactattatt taaatttcaa aatcttgttt gttttgatct gtttgcggtg ctttttttgc
    11881 ttgcggtttt ctcggttttc tagtttttac cggtttttcg ctgcttaaat tttcaagttt
    11941 gactactttt aaagagctat cttttgcttt tttagctatc tctttacctt tatcaagtcc
    12001 tgttaaaagg ctattttgta tcgcttttct attattaaaa gcatatatag caagcccgcc
    12061 tactaaagct ccggctaaga atggaagtgc cattttaaat cctttatttg agatattatt
    12121 catcgatttt ttcctttttt atgatttcat ttatcaataa tcctattaat cctccggctg
    12181 caactccgct aaaaaacgga aaactcggat gatttaaaag agtatttatg ttttccatat
    12241 ttgcttctcc tgaagctatt ttgtttgcct cttcaagaaa atcttttata ctgttatttg
    12301 actttggatc agtattattt tgatttgagt tttgtatatt tggagctaag ttttgacaag
    12361 atatacttaa caaagatgct tttagagccg ggatatattc gttatttgaa gtagcccaaa
    12421 gtctaaaaaa tagatctttt acgtcatcat ccataaattc cgatgcgttt ttataaaatt
    12481 catttatctc tagttcgtaa tttatagcga ctattaattt ttcaaaatta tcttttggat
    12541 ttaaaacttc gcattcgttt aaatttatac tgtaattttt ctcgtctgct aggtttttta
    12601 gcagctctaa accgcttttt ttaatagata aaatttggtt aaaaatttct gtatcgacaa
    12661 aattagaata gataagaatt cctctatttt catagttaaa agcaagattg taaatctctt
    12721 ctttagagta gttatcaaat ttaatttgca ctgcaactcc ttttgatttc ttcaattttt
    12781 ttagatatgt gttctaaatt ttgaccattt agcatatcat tccagagatg ttctggaaat
    12841 ttattttgat cgtataaaac ggtaaccgag cctactaatt tattgaattt aacgctattt
    12901 ataccgtcta tttttgctat gattttatct atttcgtcta agcctatgtt cgattgaagc
    12961 tcctttatac gaggagaaac tctaactcta aggcgaccag gaacgctatg aataagcgaa
    13021 aaatacggta aaatttcatt taatattttt aaatttgaac tcatataatc tctttatttg
    13081 aaagttttgt aattattata ttaatctact taaataaaac ttaatttatc gcttttaaaa
    13141 ctaatttttt aatttttaaa tttatgatga tttctgttat caagataata aaggtattat
    13201 taagattttt taggtattat ggcgaaaatt tttttaagga gctgctatga gctatgatga
    13261 attagaatta gaagctatga tccaagaggt tttagaagat tgtggcgact ttgagaattt
    13321 agatgacgaa gagctttttg aattaataga aaagataaaa gagcttacag atggcgacac
    13381 ggaagaggct tatgagcatc taaacggata ttctccgata agcagaaaaa ggtttatgtc
    13441 gttgtattcg gtttaatatt ttaaatttaa tgtaaattat gatattattt tgacaacaaa
    13501 ttatagaagg atatcatact cttatgcaaa gatttctact tattttactg ctatttataa
    13561 cagcagcctt tagcgctact ataggaaacg gcgagacgca aatcatcagt atcgaatcac
    13621 aatatgctgg aaaattaacc gcaaacgaca aaaaaatatc ctggatagat catccattaa
    13681 aaccgggatt taaaatagct tttgtgccgg ctagttatta cgaaacaaaa aatatcaatg
    13741 ttaaaaatag tttagacgga gagatgggaa ttactgagtt tgaacttgtt aagaaagatt
    13801 ataaacaaga aaaaattacc gtttcagaat caaaagtaaa accgcctcaa tctgttatga
    13861 aacgtataga caaagagagg cgtgaagctc aacaaattta taaaacagtt agtaaaggtc
    13921 tattttttaa tgataaattt atatctccta tgaatagttt tataacaagt gattttggca
    13981 ctgctagagt atttaacgga cttataaaaa gttatcacgg aggaacggat tttagagctg
    14041 cagtcggaga aagcgtaatg gctgcaaata gcggaatagt aaagatagca aaagatagat
    14101 attacgccgg taaaagtgtg gttatagatc atggaagcgg tatttatact cagtattacc
    14161 atcttagcga tatcatcgta aaagtcggtc aaaaagtaaa taaaggcgat atattaggtc
    14221 ttagcggaga tagcggtaga gttagcggac cgcacttgca ctttggagta attataaaca
    14281 atgttcaagt aaatcctctt gattttataa gtaaaattaa tatggtttta taaattcaca
    14341 aaaaatcaac aatttaagct tataattcca tcatatttca agataaagga tgaacgatga
    14401 aaagtaaaat cttatcagcc gctttagtaa cggcggttct tagcagtttt gcatttggtg
    14461 cgaatgataa agctatagag cttagcaata aaatttttgc ggttaaaaag gacgctagcg
    14521 caaaagagct tataataaga gatgcgtgtt ttaaaattca taatgagatg ttagaagtca
    14581 ctaaaaatat gactcctgat caaagagatg atttcaataa agaatttaga atgcaaatga
    14641 gaaaaaatat ggcgactctt ggcaaagacg agtattttaa tccggcagtt tgcagatctg
    14701 ttatgaaaaa acataataga aattacggca tgagaaatcc gggcatggga aatccaggaa
    14761 tgggcatggg cggtggttac aactgccaat caaatgcgga ttgtccatat aatcaataaa
    14821 tgagcaaaat cctagtctta gaagatgagc cgatgctgca agatatgata agttcatatc
    14881 ttcaaagctt cggctatgaa gtagaagctt ctgatagcta tgataaagct ctaagtattg
    14941 cttatgaaaa aaattttgat ctatttatat ttgatgtcaa aatcataggc ggtagtggat
    15001 ttgaactatt agacgagctt agatcctcag gagtggcgac tccttgtata tttgccactt
    15061 cattaaatgg tatcaatgac gttacaaagg gttttaaagt cggttgtgac gattatataa
    15121 aaaagccatt tgagttagcc gaacttcttt taagagtaca aaatatactg aaacgaaact
    15181 ttaatcacta tgtagatgat aattttatca ttattaatag taatttcaaa tttgatatcc
    15241 tacaaaaaaa attgatgcaa gatggcaaag ttctgcctct tgctaaaaaa gagactgagc
    15301 ttttatgtct atttttaaaa aataaaaata gaattttaag ccgagatgaa atttattctc
    15361 aaatttggga atttgatgaa gtaccgagcg aactaagcct aagagtctat ataagaaatc
    15421 ttagaaaact tataggtaac gaaaaaatca taagccactc aaaacttgga tatgaatatg
    15481 tctcataaaa aatatattct tcctattttt ttgctttata ccataactag tatgctcttt
    15541 ttgctgtttt tcgcagtttc atactacaaa gaggcaaaaa atgatatata cgaaaaaacc
    15601 gtaaaagatc taagagcgta tgcgaatgag attgagtata tgcttaggat aaatggcggc
    15661 ataggcgaga tcttggatct taaaagcgag tatgatataa atctttatga tatcagatca
    15721 aaaagatatg tattaaaaaa ctttgataga cctatttata atggtcgata ttacgtagat
    15781 gatgaattta tgtattacag cgacgatatt catacaaaaa gacgaactat agaattaaat
    15841 ttagaactta gaacacaaag tcctcacgct agcataaata ggctttttgt caagatatct
    15901 atgatctcaa tcatcgtgct tttggctata tctgttatag cgtattttat cgttaaacta
    15961 tcctatctac cacttttaaa tcaaataaaa actttaaata actttatcac ggatactact
    16021 catgagataa atactccttt aagtgtgata cttatgagcg tagaaatgtt tgataaaaat
    16081 ccttcaaaat accttgaaaa cattaaaata gcctctaaaa ctttatcaaa tttatataat
    16141 gatttgg
//
LOCUS       DAPPKW010000035        15812 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.035, whole genome shotgun sequence.
ACCESSION   DAPPKW010000035 DAPPKW010000000
VERSION     DAPPKW010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15812
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.035"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            474..644
                     /locus_tag="RPW04_001013"
     CDS             474..644
                     /locus_tag="RPW04_001013"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295108.1"
                     /translation="MGFFDVSMSDDDIKISKNDKIMSEICEFFVLKNDKEITKFQGSF
                     IDALEYIKANFI"
     gene            964..1296
                     /locus_tag="RPW04_001014"
     CDS             964..1296
                     /locus_tag="RPW04_001014"
                     /inference="COORDINATES: protein motif:HMM:NF016820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbC/VirB2 family protein"
                     /protein_id="HDX6295109.1"
                     /translation="MGGGERNARLEKPNSSKTNSRLKQLVAFLTLSLFPNLLFAAGGT
                     GLTKVDNFFSTVNGWLTGGGALVLAIALSVAGYKVMWGGQTVREVSPILLGGILIGGG
                     PMIAGMLM"
     gene            1307..4096
                     /locus_tag="RPW04_001015"
     CDS             1307..4096
                     /locus_tag="RPW04_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016647466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirB3 family type IV secretion system protein"
                     /protein_id="HDX6295110.1"
                     /translation="MLVSEPIYKALTRPPMVFGVPMVPFMMMALGWALFAIFAKVLFG
                     DVYLLLAVMIIPSIFVFQMIVKKDDMAFRLWGLKLRFFRSPSINKFYNGRKSYMANST
                     YSKQSLRNKYPKLSVVGLSEFANLENLIPYQTLIDNIVITKEGDYLASWRVDGIAFEV
                     EDDELIDMNKNKLNMLVRQFAGENVSFYFHNARINTQVNQKGYFSNEFLKNFAKKYYE
                     IFSADNLKENRLYLTAIYSPLSRAEKMSFKNQNIEAKKRQIRTHLKSFNQKCNVIEQN
                     LSHFKPYRLGVYDIEGVKFSSQLELYNYLIGGKFTKVRVPNAPLDFYLNGNLNEIFPS
                     QHTMQLNYNDGTRKFVKAIELKDYPNVSFSGIFDSLMYANVEYTITQSFTPLSKKEAR
                     DELTKQQKRLMAAEDDAISQISELSSALDELQSDIIFGEYHFSIVIYADKQNECERIA
                     NQIAVVLQDLGFLATQANIALEATYFAQLPANFMLRPRLHTISSKNYASFMALHNFPR
                     GKQQGNPWGDAIAILQTPNGQPFFFNIHKTNFQKDEFGKNDVLANTFVLGQSGGGKTV
                     LMNFTLNMLCKYNELETFADSTPKDKRKATYFYLDKDKGALGNIMTIGGKYVMITSGQ
                     PTGFNPFCCEATPENIRRLKVLMKMLVTKGGQTHLMLTTRDEEQLNLAVDSVMRLEKS
                     DRTHGVSRVWQLLQEGENETSSLKSRLMAWTIGNEFGWVFDNETDTLDFSDENILVYG
                     IDGTDLLSDDEISPYVAYYILWRIIDMVDGRRFGLFIDEAWDWLKNPVVSKEVFNKEK
                     TIRKENGFLFLGTQSVEDIAKSDIGTAIMEQSETILLLSNPKAKEDDYCRALNMSEAE
                     YQFVKTTIPEKYEFLIKKGVDYRAIAKINLSHLGNMVRVLSTSKDYVDELTKINAMNI
                     GYDEKYQLVKELYRF"
     gene            4106..4897
                     /locus_tag="RPW04_001016"
     CDS             4106..4897
                     /locus_tag="RPW04_001016"
                     /inference="COORDINATES: protein motif:HMM:NF019608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295111.1"
                     /translation="MQNNLVYKTKKTLVMAASVALLSSNLVASGIPVVDGAALAQNQM
                     TFTMEWTQTLKDWAEKVKVWGEEATHRVSEVKKWADERVQWANDLYTKTGIRDIVNFT
                     KEMNELYNEAYNTGHTIYTQATGFSLDNFDERAWDLFVKFGGKDQCSSINDVSHRNIC
                     KKNTTSAFKELQVVDRQFDRLKREIDDLDKLGKEISRNKGKQEDLKGSLDTANQIALL
                     RARQENNWRAYQRDMDQLENEKKRLQEAEFQAKKERQFKAFEILQ"
     gene            4907..6082
                     /locus_tag="RPW04_001017"
     CDS             4907..6082
                     /locus_tag="RPW04_001017"
                     /inference="COORDINATES: protein motif:HMM:NF016491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein"
                     /protein_id="HDX6295112.1"
                     /translation="MYAVKTEVGKGLYSIIMDISSNVDNFFSKNYSTGVNTLQSVIDA
                     TGNILAIYLTVWIMIEGYKILWGNAKQSFQNFAFDATIKFIFIVLSMNAGNWINLVFE
                     AFNGAKDFIDTSLSYDSKGVYEKVAIWAGLMGDYYRVVWDKSGTFEIAYMIFIIIVAF
                     IGFLIGAVPILRALFVNTLSFLLLMILAPLAFYFLIFKTTKNSFSQWFQMVLSNIVTL
                     LCLSLFLNILFDYIFIKLNKLNNFYDEAFLVALLMIFYGILANVICGMAVGIAEKLTN
                     ISLDGLAGSGVGRAMGLTGAIGGAAIGGAMLGARAAQVMGAGKAAGFIGSRLMGSAAS
                     AAKEIGSSKLGQSVGQKLNEGLNTLKGSSTGKAVGARLDQAKNIGAKINNFTKGQGW"
     gene            6084..6332
                     /locus_tag="RPW04_001018"
     CDS             6084..6332
                     /locus_tag="RPW04_001018"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295113.1"
                     /translation="MINLNNILNIKKQFKTILNYAKIFFSLLVGVSLMSGCATHSSAK
                     FENNGNQKWEDYFDSKEFKPINENKENLGLKQNLKKAM"
     gene            6333..7037
                     /locus_tag="RPW04_001019"
     CDS             6333..7037
                     /locus_tag="RPW04_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein"
                     /protein_id="HDX6295114.1"
                     /translation="MKKVDKQIENFVKNNPDEVAISYEASIRYIAEQANKRAYFISGV
                     ALLVAIISVIAVCLLTPLKSVEPYVIRVDNTTGMVDIITSVNEAAFSQNEALDKYFVT
                     MYVKAREGYYYDILQNDYELVQILSYPDVANIYLKTYEGEKARDQVLKNDFEVEIDIV
                     SVTLGNSAGSPIATIRFNEITRKKGEKIAISNKAKIVTLSYDYQPSSLTTEEERIKNP
                     LGFKVSTYRIDDEIRR"
     gene            7040..7315
                     /locus_tag="RPW04_001020"
     CDS             7040..7315
                     /locus_tag="RPW04_001020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295115.1"
                     /translation="MITSTDFTKLIDTMAQILAQKNEDIAELVREIEALESKLAKYED
                     KELFEVVGTSNLGNQVFNIYEKFVPEFVTDEEIAIANLIAPKFDILE"
     gene            7319..7867
                     /locus_tag="RPW04_001021"
     CDS             7319..7867
                     /locus_tag="RPW04_001021"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295116.1"
                     /translation="MDYKTAYAHDLLTQAEQCFTDKELSYSFLKFIVKNSKNKQEAEW
                     RLKELRARICSLENMAKNSYNEILDMQYTAEQEENEHIKEQRQVFRNDEIYDFFMDDK
                     NDEFIKYLKEMAPLERINIAIRQFEALRIQSDKLIKDLKKNYQKMAITTPANLSKTSV
                     QIKSSSTLQLDRGFYLNNTGRF"
     gene            7868..8809
                     /gene="virB9"
                     /locus_tag="RPW04_001022"
     CDS             7868..8809
                     /gene="virB9"
                     /locus_tag="RPW04_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002834097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein VirB9"
                     /protein_id="HDX6295117.1"
                     /translation="MIKNNKKLFNIAIILLLAMANLHAINIPKLSKFDKRITYATYNA
                     DDVVLVKCKEGFVSIIEFDKDERIVNIATGFSDGWEVMDKDNYLFIKPKSYTIKSEEQ
                     NMTDENGEQVEFYGSSVIQPNPTDWKTNLIITTNKDKVYTFDLELGEVSKINYKLTFN
                     YITPKEKIEKEKADKELAQKIAKEKAEYQKEIERNTIPRNWNFVMHVNKNSDTIVPDY
                     AYDDGVFTYLGFSSTKTIPSVFLYDEINKESILNSHVKKDGKYDVVVIHKTAEKILLR
                     SGDKLVGIINNGYGQNPLDKTYSTNKDNIQREIISNE"
     gene            8916..9968
                     /gene="virB10"
                     /locus_tag="RPW04_001023"
     CDS             8916..9968
                     /gene="virB10"
                     /locus_tag="RPW04_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004276301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein VirB10"
                     /protein_id="HDX6295118.1"
                     /translation="MMVTAIMGLCLVVLVMVGLSFLNKNKEVGETVKSQVQQIGTDVK
                     SKNFELSQEQKTEQRNFNEFSGVPATQQQANAQEAQKADPLSSNPAMPHKPTFTPKVF
                     KTGGSLAIATSSSQKNEIYTPDQNISWEEQARKFEEEKEYEGDTYTPKVATKDKFNPS
                     LLLQKGTYIGCSLNTRLVSQIKGGVSCTTSENIYSKDGVTLLIEKGSKIFGSFRSGEM
                     NDGINRIFVVWSEIRTPNNINIPVQSGASDELGGSGMQGYVDHQWMKRFWASILLSMI
                     DDVFNYVANGKRDNSYDYSENTRDATQQMANTALEEFIKIKPVLYRNQGDIVGVYVNR
                     DIDFSKVYKLKVGKRK"
     gene            9965..10960
                     /gene="tadA"
                     /locus_tag="RPW04_001024"
     CDS             9965..10960
                     /gene="tadA"
                     /locus_tag="RPW04_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly complex ATPase component
                     TadA"
                     /protein_id="HDX6295119.1"
                     /translation="MSNIGLDKSTMLDGYVRQYFGKYLADDNINEIAYNGGNLIWVED
                     TNGNWTSFESELNFKTAQAFANASAAFKNDKLDRQKPILSCILSTGERVQIVVPNATK
                     EDHISITIRKPSKVRYTIDDYIKNGSLDQKMANELKAAIESGKNIIICGETGSGKTTF
                     MKTLIDFIPLDERIITIEDVEEIKFWDHKNFVQLFYPSEAKSDSPVNATTLLKSCLRM
                     KPSRILLAEVRGGETYDFLNVISSGHNGSMTSCHAGSVKSAIDRLVMMSMQNAQAQVL
                     GKDMLLDIVLNTIDYIIVFKRHNKKRQIMEYLANGEYFVRNIENDTFRKESLRNK"
     gene            10960..13167
                     /locus_tag="RPW04_001025"
     CDS             10960..13167
                     /locus_tag="RPW04_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HDX6295120.1"
                     /translation="MKRSQVVFSVIIALVLGYFLASVLFFGLNHSFKKLPKLWYAGLT
                     FDMLINGWSKAYLSYFLANFISFTLAFLLPLLPKKQSLHGDARFANANDVKKMDLYGD
                     GIIIGKFQNRLLRFGGQQFVSLGAPTRSGKGVGIVIPNLLDWKESAVVQDIKQECFDF
                     TSGYREKILGQKVYLFDPFNKRTHRYNPLAYIDMNSDNADGQLTDFANILYPMTGDST
                     TQFFNQLAQNLFIGICYIVHDLLNSQGGIILLKKLNAEIDFTLYGILQMSEGFKGEVN
                     IDGERKIIFKAFDDTYNVLAELGLIGKKAQMRCQSYFKIDSDNTKSGVMSSFNAPLMM
                     FRNDNMRLATSANDFDFRDLRKEKMTIYIGITPDQLANAKLILNIFWQQLILVNTKEL
                     PQANPELKYKVLLVMDEFTAPGYLSIYLKSISFIAGYWLRSLMIYQSGSQLEANQPDG
                     YGREGAKTLLTNHACQIFYTPREQEDAEKISKILGTKTIKNRSRNLGQGGGGSESDTG
                     RALMLAQELREMPFEDELITIDNGKPIMAKKAFYYSDSYFMNKFKEVSPSLRAIDGKE
                     YEKEQYEEIIDKKTKKSQKRIKIKQNGKIPSRGQLEKAIQNGETNIKVPLQNMANIKS
                     YFKELYNDEGERFEKLPEIVREIDENQEEYEKKLRLQRDRDETSKQEAKKLQEQYEIE
                     QSGKANESVENIDTDPVADETINGSDSDEEQMAQNATCPNYDELDDENQDYSE"
     gene            13171..13392
                     /locus_tag="RPW04_001026"
     CDS             13171..13392
                     /locus_tag="RPW04_001026"
                     /inference="COORDINATES: protein motif:HMM:NF024139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDX6295121.1"
                     /translation="MKDVNFYEKYITPSELEEMFGISQSTQYKLRMQKNYTDENRQKH
                     IPIPFVKIGNRILYNIDSIKKWLKNIEQK"
     gene            13410..13877
                     /locus_tag="RPW04_001027"
     CDS             13410..13877
                     /locus_tag="RPW04_001027"
                     /inference="COORDINATES: protein motif:HMM:NF024517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cag pathogenicity island protein"
                     /protein_id="HDX6295122.1"
                     /translation="MIKFTYLASVATAFMLVGCTSVPKPIELDGNSQITINQDLIKQE
                     KRNIPLDPFLKQNNWTYNLMFEKIGDEYIPNDMVVKTFYVAHNADRIIIVGNQEIAQD
                     YKNYLTSNGCKNIAIHPVDSIGLSKKRVNILFFGMKGKNDESFIKNFTNLFSF"
     gene            13834..14538
                     /locus_tag="RPW04_001028"
     CDS             13834..14538
                     /locus_tag="RPW04_001028"
                     /inference="COORDINATES: protein motif:HMM:NF019069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295123.1"
                     /translation="MRVLSKILLTCLVSSSVVYGADELTGDTKLACEAILCLSSSERP
                     GECAPSLAKYFSITAKKVHETIRKRKNFLKLCPTDETAKVDQNYASLIDTLSEVGGGC
                     DANTLNKNLEKRRVRIGESRIRQTQIRVNPNMPEYCVRLARHNYTNIKSIKYTCDTKF
                     YDMASWNRGYELISINQATYNTLPSDKKEVQTNPEYTKCGDPDRSSYWQKLCRQNTPQ
                     YFFFEKKYFSKVCWVD"
     gene            14540..15517
                     /locus_tag="RPW04_001029"
     CDS             14540..15517
                     /locus_tag="RPW04_001029"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295124.1"
                     /translation="MENNENLHDDNKTTNENAPVKTLESKDEIIARLESEAARAKDEL
                     ENVEQGKKELQDKLERLIYERNMTAQILRDEVAELSSKFEKAGLKISEKGVISVLDYS
                     NYQKRVTIAFNMFDSDLNMLLKTINRIGEENNADYSNHTKRVENLLDESVKLRQLFDY
                     LNEFILNPPSKEFMALMNNTLGIRKIAQDYKEFQNLADITKIKVSMQEQENVFNEMVS
                     KFDSFAINQNKFFEDELNKIENFKGKINARLNDTGDEYKRFSENMISNLNDQLKVFEI
                     NLAEYKEIREKEVKLLSKLKKGGYALTGLLFLLCLALGGVVGYAISLVK"
     gene            15549..>15812
                     /locus_tag="RPW04_001030"
     CDS             15549..>15812
                     /locus_tag="RPW04_001030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295125.1"
                     /translation="MADFDRTENGGDKRLATVFISKTELQEQNKTLIGFGMERPYEKD
                     GKQVELGAVKAFYAIENARNFLNGVECRNHPVKIECGLENEKHT"
BASE COUNT         5891 a         2399 c         3080 g         4442 t
ORIGIN      
        1 gtattaaaac atagtaaaaa gttgaaattc atattttcat ttaagctaaa aaatctattt
       61 aagaattatt tttgcttaaa aaatgcctaa atttgcccaa aatctcttaa ggttaaaaaa
      121 ttttctttct gttttttaat ggttttttaa ttacaatgtt acctatttta agcacttgta
      181 agtactttaa gcaaaaataa aaaatgcaaa ttctaatcaa tatatttcaa agagcccatt
      241 ctatcggctt ttttaataga ttgtttgggt tttttactgc ttaaaaaacc caaagtgcaa
      301 taaaaagctt ttgaaagtta taaaaataca atctaatttt gacaaaataa gccaaaacgg
      361 ttactatatg gtatttgacg gcgataggtt agtaacggca tattaaagat tatgataaaa
      421 agcgtgcata taaatattta tttgccacgg tttgcgttag aaacggcttg attatgggct
      481 tttttgatgt atctatgagc gatgatgata taaaaatatc taaaaatgat aagataatga
      541 gcgaaatttg tgaatttttc gtgcttaaaa acgataaaga aataaccaaa tttcaaggct
      601 catttataga cgcactagag tatatcaaag caaatttcat ttgacttcgc aggtcagcag
      661 agccgacctt tgcgataaac tttagaaaag tttaatcaaa ctaaagcccc acttcgtggg
      721 gtaccacatt agcgatttaa atagtgttta aagcccttta atgggctttt catacttttt
      781 aataatgttt aaaagctcat ctagggtttt gcctttttcg tagttttcta accagctatc
      841 aacccacaca agacaagtaa ttttcatatt tttatattat tttatttaaa aatatgttat
      901 aattcgttgt caattttata aaggagatac aaaaatgatg acaaaacttt ctaccctaat
      961 agtctggggg ggggggagcg taacgctcgt ttagaaaaac ccaactcttc taagacaaac
     1021 tctcgtttaa agcaactagt tgctttttta accctttcct tatttcctaa tcttttgttc
     1081 gctgctggtg gcactggttt aactaaggtt gataattttt tctcaactgt taacggatgg
     1141 cttaccggtg gaggcgcact tgttttagct attgcacttt cagtagctgg ttataaagtt
     1201 atgtggggcg gtcaaacagt aagagaagtg tcgcctattc tattgggtgg cattttaatt
     1261 ggtggtggac cgatgattgc tggtatgtta atgtaaggct ctatcaatgc tagtctccga
     1321 gcctatatat aaagctttaa cacgtccgcc catggtattt ggtgttccga tggtgccttt
     1381 tatgatgatg gcacttggtt gggctttgtt tgcaattttt gcaaaagtgc tatttggcga
     1441 tgtctatttg cttttagctg ttatgatcat tccttctata tttgtctttc aaatgatagt
     1501 taaaaaagat gatatggctt ttagactttg gggactaaag ctacgatttt tccgctctcc
     1561 ttccataaat aaattttaca atggtcgtaa aagttatatg gcaaattcaa cctattctaa
     1621 acaatcttta cgtaacaaat atccaaaact tagtgttgta ggacttagcg agtttgcaaa
     1681 tttggaaaat ttaattcctt atcaaacatt aatagacaat atagtaatca caaaagaagg
     1741 cgattatttg gctagttggc gtgttgatgg cattgcattt gaagttgagg atgatgaact
     1801 gattgacatg aataaaaata agctaaatat gctcgtgcgt cagtttgcag gagaaaatgt
     1861 aagcttttat tttcataacg caaggatcaa tacacaggtt aatcaaaaag ggtatttttc
     1921 aaatgagttt ttaaagaatt ttgcaaaaaa atattatgaa atttttagtg cggataatct
     1981 aaaagaaaat agactttatc ttacggcaat ctactcacca ttaagcagag ccgaaaagat
     2041 gagctttaaa aaccaaaata tagaagccaa aaaacgacag atcagaactc atttgaaaag
     2101 ttttaatcaa aaatgcaacg tgatagagca aaatttgagc cattttaagc cctatagact
     2161 tggtgtttat gatatcgaag gcgttaaatt tagctcgcaa cttgaacttt acaactacct
     2221 aataggcggt aaatttacca aagtgcgcgt tccaaatgca ccgcttgact tctaccttaa
     2281 cggtaattta aacgaaattt ttccatcaca gcacactatg caattaaact acaacgacgg
     2341 cacaagaaaa tttgtaaaag ccattgagtt aaaagactat ccaaatgtaa gttttagcgg
     2401 tattttcgat agtttgatgt atgcaaatgt tgaatacaca ataacgcaaa gctttactcc
     2461 actctctaaa aaagaggcaa gagatgagct aaccaagcaa caaaaaagac ttatggcggc
     2521 agaggatgat gcaattagtc aaatttcaga gctaagttcc gcactagatg agctacaaag
     2581 cgatatcata tttggcgagt atcacttttc tatcgtaatc tatgccgata aacaaaacga
     2641 atgcgaacgc atagcaaatc aaatagcagt tgtattgcag gatttgggat ttttggctac
     2701 tcaagcaaac attgcccttg aagctacata ttttgctcaa cttccagcaa attttatgct
     2761 tcgtcctagg cttcatacaa tctctagtaa aaactacgct agttttatgg cactgcacaa
     2821 tttcccacgc ggaaagcaac aaggtaatcc gtggggagat gcaatagcga tcttgcaaac
     2881 accaaacgga caaccatttt tctttaatat tcataagaca aattttcaaa aagatgaatt
     2941 tggtaaaaat gatgttttgg caaacacttt cgttcttggt caaagtggcg gtggaaaaac
     3001 agtgctaatg aactttacgc ttaatatgct gtgtaaatat aatgagcttg aaacatttgc
     3061 agatagcaca ccaaaagaca agcgcaaagc aacctatttt tatttagaca aagacaaagg
     3121 tgcgcttggc aacattatga caataggtgg caagtatgtg atgataacta gcggtcagcc
     3181 gactggcttt aatccgtttt gttgcgaggc aacacctgaa aatatccgcc gattaaaggt
     3241 tttaatgaaa atgctagtaa ccaaaggcgg acaaacccat ctaatgctaa caacaagaga
     3301 cgaggagcaa ttaaatttag ctgtagatag cgttatgaga cttgaaaaga gtgatagaac
     3361 tcacggcgta agtagagttt ggcaattatt gcaagaggga gaaaatgaga caagctcact
     3421 taaatctaga cttatggcgt ggacaatcgg taatgagttt ggctgggtat ttgataatga
     3481 aactgacacg ttagatttta gtgatgaaaa cattcttgtt tatggcatag atggcacaga
     3541 cttacttagc gacgatgaaa tttcgccata cgttgcttat tatatcttgt ggcgtattat
     3601 cgatatggtt gatggtcgta gatttggttt attcattgat gaggcgtggg actggctcaa
     3661 aaatccagtc gtaagcaaag aggttttcaa caaagaaaag accattagaa aagaaaacgg
     3721 ctttttattt ttaggcactc agagcgtgga agatatagca aaatcagata taggcacagc
     3781 gataatggag caaagtgaaa ctattttact actcagtaat ccaaaagcca aagaagatga
     3841 ttattgtaga gccctgaata tgagtgaggc cgaatatcaa tttgtaaaaa caacaatacc
     3901 tgaaaaatat gaatttttaa tcaaaaaggg agttgattac agggcgattg caaaaatcaa
     3961 tcttagtcac ttgggaaata tggtaagagt gctttctact tcaaaagact atgtagatga
     4021 gctaacaaag atcaatgcta tgaatattgg ctatgatgaa aaatatcagc ttgtaaaaga
     4081 gctatacaga ttttaaggag aaaaaatgca aaacaatctt gtttataaaa caaaaaagac
     4141 cttagttatg gctgcttcag tggcactatt gtcatcaaat ttggttgcat ctggcattcc
     4201 agttgtagat ggtgcagcac tagcacaaaa tcaaatgact tttacgatgg aatggacaca
     4261 aacacttaaa gactgggcag aaaaagtaaa ggtatggggc gaagaagcaa cgcacagagt
     4321 tagtgaagta aaaaaatggg ctgatgaaag ggtgcagtgg gcaaacgatc tttatactaa
     4381 aactggtata agagatatag taaatttcac gaaagagatg aacgagcttt ataatgaagc
     4441 ctacaatact ggccatacaa tttatacaca agcaacaggt tttagtcttg ataattttga
     4501 tgaaagagcg tgggatctat ttgtaaaatt tggcggaaaa gatcaatgct catcgatcaa
     4561 tgatgtttct catcgaaata tttgcaaaaa gaataccaca agtgcattta aagagcttca
     4621 agttgtagat aggcaatttg atcgcctaaa aagagaaatt gatgacctag ataaattagg
     4681 aaaagagata tctagaaaca aaggcaaaca agaagattta aaaggttcat tagatactgc
     4741 aaatcaaatc gcacttttaa gagcaagaca ggaaaataac tggagagcat accaaagaga
     4801 tatggatcaa ttagaaaacg agaaaaaacg tctgcaagag gcagaatttc aagccaaaaa
     4861 agaaagacaa tttaaggctt ttgagatatt gcaataggtt tttattatgt atgctgtaaa
     4921 aacagaagtt ggcaaaggtt tatattcaat aattatggat atatctagca atgttgataa
     4981 ctttttctca aaaaattatt caacaggagt gaatacactt caatccgtaa ttgatgcaac
     5041 aggcaatatt ttagccatat atttaacagt gtggataatg atagaaggtt ataaaattct
     5101 atggggcaat gctaagcaaa gttttcaaaa ttttgcattt gatgcaacta taaaatttat
     5161 ttttatagtt ctttctatga atgctggaaa ctggataaat ctagtatttg aagcttttaa
     5221 tggggcaaaa gattttatag atacctcttt atcatatgat agtaaaggtg tatatgaaaa
     5281 agttgctatt tgggctggac ttatgggcga ttattatcga gtagtatggg ataaatcagg
     5341 cacttttgaa attgcatata tgatttttat cataattgtt gcgtttatag gctttttaat
     5401 tggtgcagtt cctattttaa gagccttgtt cgtaaatacg ctatcatttt tattgcttat
     5461 gattttagca ccacttgcat tttacttttt aatcttcaaa accactaaaa attcattctc
     5521 gcagtggttt caaatggtct tatcaaacat tgtaaccctg ctttgcttgt cgctattttt
     5581 aaatatttta tttgactata tttttataaa gctcaataaa ttaaataact tttatgatga
     5641 agcattcctt gtagcactct taatgatatt ctatggaatt ttggcaaatg taatatgcgg
     5701 tatggctgtt ggaattgctg aaaagcttac aaatatcagc cttgatggat tggctggttc
     5761 aggcgttggt cgtgctatgg gtcttactgg tgcgatcggt ggtgctgcaa taggcggtgc
     5821 aatgcttggt gcaagagccg cacaggtaat gggagcaggt aaggcagctg gttttatcgg
     5881 ctcacgctta atgggatctg ccgcatctgc tgccaaagaa attggtagct caaaattagg
     5941 tcagtctgtg gggcaaaaac taaacgaagg tttaaatacg ctcaaaggct cctctacagg
     6001 caaggctgtt ggggctaggc tagatcaagc taaaaatata ggtgcaaaaa taaataactt
     6061 cacaaaagga caaggttggt aatatgataa atttaaataa tattttaaat attaaaaaac
     6121 aatttaaaac aatattaaat tatgccaaaa tatttttttc tttattggtc ggcgttagcc
     6181 ttatgagtgg ctgtgccact catagttctg ctaaatttga aaataatggc aatcaaaaat
     6241 gggaggacta cttcgatagc aaggaattta aaccaataaa tgagaataaa gaaaatttag
     6301 gtttaaaaca aaatttaaaa aaggcaatgt agatgaaaaa agtagataaa caaatagaaa
     6361 attttgttaa aaataatcct gatgaagtgg caattagcta cgaggcaagt attcgctata
     6421 tagccgagca agcaaataaa agagcttatt tcatctcagg agtggcacta cttgtagcta
     6481 ttattagtgt tatagcagtt tgcctactaa caccattaaa atcagttgaa ccttacgtaa
     6541 taagggttga taatacgact ggtatggtag atattataac cagcgtaaat gaagccgcat
     6601 tctcgcaaaa tgaagcacta gataaatact ttgtgacaat gtatgtaaaa gctagagagg
     6661 gttactatta tgatattttg caaaatgatt atgaattagt gcaaatttta agctatccag
     6721 atgttgccaa tatttattta aaaacctatg aaggcgaaaa agcaagggat caggtcttaa
     6781 aaaatgactt tgaagtcgag attgatattg tatcggttac tcttggcaat agtgcaggat
     6841 cgccgatcgc aaccataaga tttaacgaaa tcactagaaa aaaaggcgaa aaaatagcca
     6901 tatcaaacaa ggctaaaatc gtaacactct catacgatta tcaacctagt tcgcttacga
     6961 cagaggaaga gagaataaaa aatccacttg gttttaaagt tagcacatat cgaattgatg
     7021 atgaaataag gagatagaaa tgatcacaag cacagatttt acaaaactaa ttgatacgat
     7081 ggctcaaatt ttagctcaaa aaaatgagga tattgcagag ctagtgcgag agatagaggc
     7141 actcgaaagc aaacttgcaa aatatgagga caaagagctt tttgaagtag tcggcacatc
     7201 aaatttaggt aatcaagttt ttaatatata tgaaaaattt gtgcctgagt ttgtaacaga
     7261 tgaagagata gcaatagcta atctcatcgc tccaaaattt gatatcttgg agtaaaaaat
     7321 ggactataaa acagcctatg cgcacgattt attgacacaa gcggaacaat gctttaccga
     7381 caaagaactg tcttatagtt tcttaaaatt tattgtcaaa aattcaaaaa acaagcaaga
     7441 ggcagaatgg agactaaaag agctaagagc taggatttgt tctttagaaa atatggcaaa
     7501 aaactcatat aatgagattt tggatatgca atataccgca gaacaagagg aaaatgaaca
     7561 catcaaagag caaagacagg tttttagaaa cgatgaaatt tatgattttt ttatggatga
     7621 caagaacgat gaattcataa aatatctaaa agagatggct ccgcttgaac ggatcaatat
     7681 tgccattagg caatttgagg cgttaagaat acaaagcgat aagctaatta aagatttaaa
     7741 aaagaattac caaaaaatgg caattacaac acctgccaat ctatcaaaaa ctagtgtgca
     7801 aattaaatca agtagcactt tgcaactaga tcgtggattt tatctaaaca atactgggag
     7861 attttaaatg ataaaaaata ataaaaaatt atttaatatt gcaataattt tattattagc
     7921 aatggcaaat ttgcacgcaa taaatatccc aaagttgtcc aaatttgaca agcgtataac
     7981 ttatgcaaca tataatgccg atgacgttgt gctagttaaa tgcaaagaag gttttgtaag
     8041 cattatcgaa tttgacaaag atgagcggat agtaaatatt gccactggtt ttagcgatgg
     8101 ctgggaggtt atggataagg ataattacct atttatcaaa cccaaaagct acaccataaa
     8161 atccgaagaa caaaatatga ctgatgaaaa cggcgaacag gtagaattct atggtagctc
     8221 tgtcatccag ccaaatccta ctgattggaa aacaaacttg attatcacaa caaataagga
     8281 caaggtttat acttttgatt tggagcttgg agaggttagc aagattaact ataagctaac
     8341 atttaactac ataacaccaa aagaaaagat agaaaaggaa aaggctgata aagaacttgc
     8401 acaaaagata gcgaaagaaa aagctgagta tcaaaaagag atcgagcgaa acacaatacc
     8461 aagaaactgg aattttgtaa tgcacgtcaa taaaaatagc gatactattg tgcctgatta
     8521 tgcttatgat gatggcgttt ttacgtatct tggctttagt tctactaaaa ctatacctag
     8581 tgtattttta tacgatgaga tcaataaaga aagtattctt aatagccacg ttaaaaaaga
     8641 cggcaaatat gatgtggtcg taattcacaa aactgctgag aagattttac tcagaagtgg
     8701 cgataaatta gttggtatta tcaataacgg ttatggtcaa aatccgcttg ataagactta
     8761 tagcacaaat aaagacaata ttcaaagaga gattataagc aatgaatgaa aataaaatta
     8821 gcgaaaatgc aaacaatcat tcaaatgatc aagagcctca agtagaacgt attgcctacg
     8881 agcaaccaga gatagaaaac gaacccaaca gaaaaatgat ggttaccgcc attatgggct
     8941 tatgtttggt agttttagtt atggtcggtc ttagcttttt aaacaaaaat aaagaagttg
     9001 gcgaaaccgt taaatcacaa gtgcaacaaa tcggaaccga tgtaaaaagt aaaaatttcg
     9061 aattatcgca agaacaaaag acggagcaaa gaaattttaa tgagttttca ggcgtgccag
     9121 ctacacaaca acaagcaaac gcccaagaag cacaaaaagc agatccgctt tcttcaaatc
     9181 cagcaatgcc gcataagcca acatttacac caaaggtttt taaaactggc ggaagcctag
     9241 caatagctac aagtagctca caaaaaaatg aaatatatac ccctgatcaa aatatttctt
     9301 gggaggaaca agcaagaaaa tttgaagaag aaaaagaata tgaaggagat acatatacgc
     9361 caaaagtagc aacaaaggat aaatttaatc ctagcttact tctgcaaaaa ggcacataca
     9421 taggatgttc tttaaataca aggctagttt cacaaatcaa aggcggagta tcttgcacaa
     9481 ctagtgaaaa tatttacagc aaagatggcg taactcttct aatagaaaag ggaagtaaaa
     9541 tttttggtag ttttagaagc ggcgaaatga atgatggcat aaatagaatt tttgtcgtgt
     9601 ggagcgaaat cagaacacca aacaatatca atattccggt gcagagcggc gcaagcgatg
     9661 aattgggcgg aagtggtatg caaggatatg ttgatcatca gtggatgaaa cgattttggg
     9721 ctagtatttt gctttctatg atcgatgatg tgtttaacta tgtcgcgaac ggcaaacgag
     9781 ataatagcta cgattatagc gaaaacacaa gagatgcgac ccagcaaatg gcaaacactg
     9841 cacttgaaga atttataaaa atcaaaccag tgctttatag aaatcaaggc gatatcgttg
     9901 gagtatatgt taatcgcgat attgatttta gcaaagttta taaattgaaa gtaggcaaaa
     9961 gaaaatgagc aatatagggc tagataaatc aacaatgctt gatggctacg ttaggcagta
    10021 ttttggaaaa tacttagccg atgacaatat aaatgagata gcttataatg gtggaaattt
    10081 aatttgggta gaggacacaa atggtaactg gactagcttt gagagtgagc taaattttaa
    10141 aacggctcaa gcatttgcaa acgcaagtgc tgcgtttaag aatgacaaat tagataggca
    10201 aaaacctatt ctgtcttgca ttctttcaac tggtgaaagg gtgcagattg tagtgccgaa
    10261 tgccacaaaa gaagaccata tatcaattac cattagaaag ccaagcaaag tccgctatac
    10321 aatcgacgac tatattaaaa atggttcgct agatcaaaaa atggcaaatg agctaaaggc
    10381 agctattgaa agcggcaaaa atattatcat ttgtggcgag actggtagcg gtaaaactac
    10441 ttttatgaaa acacttattg attttatacc actagatgag agaataatta caatcgagga
    10501 tgttgaagag attaaatttt gggatcataa aaacttcgtg cagttatttt atccaagcga
    10561 agccaaaagc gatagcccag taaatgcaac aactctttta aaaagctgcc taagaatgaa
    10621 accaagcaga attttattgg cagaggtcag aggcggagag acttacgatt ttctaaacgt
    10681 tatttcaagc ggacacaacg gctcaatgac aagctgccac gctggcagtg taaagtccgc
    10741 cattgatcgt cttgttatga tgagtatgca aaatgctcaa gcacaagttt taggcaagga
    10801 tatgttactt gatattgtat taaatacaat tgattacatt attgttttta aacgtcataa
    10861 taaaaaacgc caaattatgg agtatttggc aaacggcgaa tacttcgtaa gaaatatcga
    10921 aaacgatact tttagaaaag agagcctaag gaacaagtaa tgaaaaggtc tcaggttgtt
    10981 ttttcggtta ttatcgccct agttcttggc tactttttag ccagcgttct attttttggg
    11041 ctaaatcata gctttaaaaa acttcctaaa ttatggtatg caggacttac ctttgatatg
    11101 ttgataaatg ggtggtctaa agcatattta tcatactttc tagcaaattt tattagtttt
    11161 acactagctt ttttgttgcc gctattacca aaaaagcaaa gtttgcacgg cgatgcacga
    11221 tttgcaaatg ctaatgatgt taaaaaaatg gatctatatg gcgatggcat aatcatcggt
    11281 aaatttcaaa atcgcctttt aagatttggc ggtcagcaat ttgtctcact tggcgcgccg
    11341 acacgtagcg gaaaaggcgt tggcattgtt ataccaaatt tacttgactg gaaagaaagt
    11401 gcagtagtgc aagatataaa gcaagaatgc tttgacttta caagtgggta tagagagaaa
    11461 attttggggc agaaagtata tttgtttgat cctttcaata aacgcaccca taggtataac
    11521 ccactggctt acatagatat gaatagtgat aatgcagatg gacagcttac tgattttgca
    11581 aatattttat atccaatgac tggagatagc acaacccagt tttttaatca attggcacag
    11641 aacctattta taggaatttg ctatattgtc cacgatctat taaattcgca aggcggcatt
    11701 atacttctaa aaaagctaaa cgcagagata gattttacgc tttatggcat tttgcaaatg
    11761 agcgaggggt tcaaaggcga agtcaatatt gatggggaac gaaaaataat attcaaggca
    11821 tttgatgaca catacaatgt tctagccgag cttggattga tcggtaaaaa agcccaaatg
    11881 cgttgccaaa gctattttaa gatcgatagc gataacacaa agagtggcgt aatgtcaagc
    11941 tttaacgctc cgttgatgat gtttagaaac gacaatatga gactggcaac ctctgcaaac
    12001 gactttgatt ttagagattt acgcaaagag aagatgacaa tttatatagg catcactcca
    12061 gaccaattag caaatgcaaa attaatacta aacatctttt ggcaacagct aattttagta
    12121 aacaccaaag aattaccgca agccaatccc gaactaaaat ataaagtgct tttagtaatg
    12181 gatgaattta ccgcgccagg gtatctgagc atttatctaa aatcgatcag ttttattgct
    12241 gggtattggc taagaagtct aatgatctat caatcaggat cgcaacttga agcaaatcag
    12301 cctgatggat atggcagaga gggagccaaa acactgctaa caaaccacgc ttgtcaaatt
    12361 ttctacactc caagagagca agaagatgcc gaaaagatta gcaaaatttt aggcacaaag
    12421 acaattaaaa atagaagtag aaatttagga caaggcggtg gcggaagtga aagcgatacc
    12481 ggtagagcct taatgctagc ccaagagctt agagaaatgc cttttgaaga tgaactaata
    12541 acaatcgata atggcaaacc aattatggca aaaaaggcat tttattactc agatagttat
    12601 tttatgaata aatttaaaga agtaagccct agtctaaggg caattgatgg caaggaatac
    12661 gaaaaagagc aatacgagga aatcattgat aaaaagacta aaaagagcca aaaacgtatc
    12721 aaaatcaaac aaaatggcaa aattccaagt cgtggccaac ttgaaaaagc tatccaaaat
    12781 ggcgaaacaa atataaaagt cccgttgcaa aatatggcaa atatcaaatc gtattttaaa
    12841 gagctttata atgatgaagg tgagagattt gaaaaattgc ctgaaatagt tcgagagatc
    12901 gatgaaaatc aagaagaata cgaaaagaaa ttaagacttc aaagggatag agatgaaaca
    12961 agcaaacaag aagcaaaaaa acttcaagaa caatacgaaa tcgaacaatc aggcaaggca
    13021 aatgaaagtg tagaaaacat agatactgat ccagtagcag atgaaacgat caatggtagc
    13081 gatagtgatg aggagcaaat ggcccaaaat gctacttgcc caaattatga tgagctagac
    13141 gatgaaaatc aagattatag cgagtagaaa atgaaagatg taaattttta tgaaaaatat
    13201 ataacaccat cagagcttga agagatgttt ggcataagtc aaagcacaca atataaatta
    13261 agaatgcaga aaaactatac cgatgaaaat aggcaaaaac acatacctat accatttgta
    13321 aagattggca atcgtatttt atacaatatc gacagcataa agaaatggtt aaaaaatata
    13381 gaacaaaagt gaattttaaa ggagtgaaaa tgattaaatt tacatatcta gcaagcgtgg
    13441 caacagcatt catgcttgtt ggttgcacaa gcgtgccaaa acccatagag cttgatggca
    13501 atagtcagat cactatcaat caagatctaa tcaagcaaga aaaacgcaat attccgcttg
    13561 atccgttcct aaaacaaaac aattggactt acaatttaat gtttgagaaa atcggcgatg
    13621 aatatattcc aaacgatatg gttgtaaaaa cattttatgt ggcgcataat gccgatagaa
    13681 ttattatagt tggcaatcag gagatagcgc aagattataa aaactattta actagcaatg
    13741 gttgtaaaaa tatagccatc cacccagtag atagcattgg attatctaaa aagcgtgtaa
    13801 atatcttatt ttttggaatg aaaggaaaaa atgatgagag ttttatcaaa aattttacta
    13861 acttgtttag tttctagtag tgttgtgtat ggtgcagatg agcttaccgg agacacaaaa
    13921 ctagcgtgcg aagcgatcct gtgtttatca agcagtgaac gaccaggcga gtgtgctcca
    13981 agtctagcaa aatacttttc aattacggca aagaaagtac acgaaactat tagaaaaaga
    14041 aagaattttc taaaactttg ccccacagat gaaacggcaa aagtagatca gaactacgca
    14101 agtctgattg atacactatc ggaagttggc ggcggttgcg atgctaatac actaaataaa
    14161 aatttggaaa agcgtcgcgt aagaattgga gaaagcagaa tacgccaaac ccaaatcaga
    14221 gttaatccaa atatgcctga atactgcgta agattggcac gccataatta cacaaacata
    14281 aagagtataa aatatacttg tgatactaaa ttttacgata tggctagctg gaataggggt
    14341 tatgaattaa tttccataaa tcaagccaca tacaatacgc taccaagcga taaaaaagaa
    14401 gttcagacaa atcctgaata cacaaaatgc ggagatcctg atcgaagtag ttattggcaa
    14461 aagctttgtc gccaaaatac accacaatac tttttctttg agaaaaagta ttttagtaaa
    14521 gtttgctggg tagattaata tggaaaataa tgaaaatttg cacgatgaca acaaaacaac
    14581 aaatgagaat gcgccagtaa aaacactaga gagcaaagat gagatcattg ctaggcttga
    14641 gagcgaagct gcacgtgcaa aagatgaact tgagaatgta gaacaaggca aaaaagaact
    14701 acaagataag cttgaaaggc ttatttatga gcgtaatatg acggctcaaa ttctaagaga
    14761 tgaagtagcc gagctaagct caaaatttga aaaggctggt ttaaaaataa gcgaaaaggg
    14821 cgttatatca gtccttgatt attcaaacta tcagaaacga gtaactattg cctttaatat
    14881 gttcgatagt gatttaaata tgttgctaaa aaccatcaat cgcattggag aagaaaataa
    14941 tgcagattat agcaatcata caaaaagagt ggagaatttg cttgatgaaa gcgtgaaatt
    15001 aaggcaactt tttgactact taaacgaatt catcttaaat ccgcccagta aagaatttat
    15061 ggctcttatg aacaatactc ttggcattag aaaaatagca caagactaca aggaatttca
    15121 aaatcttgca gatattacaa aaattaaagt aagtatgcaa gaacaggaaa atgtctttaa
    15181 tgaaatggta tcaaaatttg acagctttgc cataaatcaa aataaattct ttgaagacga
    15241 gctaaacaaa atagaaaatt tcaagggtaa aatcaatgct aggttaaatg ataccggcga
    15301 tgaatataaa agatttagtg agaatatgat ttcaaattta aacgatcagc taaaagtatt
    15361 tgagataaat ctagcagaat ataaagagat tagagaaaaa gaagtaaaac tacttagtaa
    15421 attaaagaaa ggaggatacg ctctaacagg attattattt ttattgtgct tggcacttgg
    15481 tggagttgta ggctatgcta tttctttggt taaatagcat ttaaaatttt aaataaaaag
    15541 gatacaaaat ggcagatttt gacagaacag aaaatggtgg cgataaaaga ctagcaactg
    15601 ttttcataag caaaactgag ctacaagagc aaaataaaac actcataggt tttggtatgg
    15661 aacgccctta cgaaaaagat ggcaaacaag ttgaacttgg tgcagtaaaa gcgttttacg
    15721 ccattgaaaa cgctagaaat ttcttaaatg gtgtagaatg tcgcaatcat ccagtaaaaa
    15781 tagagtgtgg tttagaaaac gaaaagcata ct
//
LOCUS       DAPPKW010000036        15597 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.036, whole genome shotgun sequence.
ACCESSION   DAPPKW010000036 DAPPKW010000000
VERSION     DAPPKW010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15597)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15597)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15597
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.036"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..417
                     /locus_tag="RPW04_001031"
     CDS             <1..417
                     /locus_tag="RPW04_001031"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDX6295126.1"
                     /translation="LSEFENENLINFVHHIDEKSSLKRVYFSDFGFKNALGYEKDPKK
                     TVANMVFCELLKLENELFFSDEIDFFIPKKNLAILVIPFLPPEFIFLKFKKSINYYKN
                     LGITKVEVISNSNNSNIAFEGIRCSVMPFWQWAVAL"
     gene            complement(458..1141)
                     /locus_tag="RPW04_001032"
     CDS             complement(458..1141)
                     /locus_tag="RPW04_001032"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295127.1"
                     /translation="MSLKELEITRKRLRLKLFAVLVIAAAFGFLAAALLFKFDAVMAI
                     IAAIFITLFVYYHFKFKITKDFEHDLKERVLAQILISMNLKALKDELDENEFLEGKNN
                     FPKTDILFNSYKICQAEFDSFNIKFYDVYLKDTNSSNTLFYGLFASSKFKKTLSMDKN
                     SLDISNLKDIFGSDISYFISDNKILLYINSQGDSLSLNLKTPISDEGVDIFKFKSGIN
                     AVLELFKSF"
     gene            complement(1141..2949)
                     /gene="typA"
                     /locus_tag="RPW04_001033"
     CDS             complement(1141..2949)
                     /gene="typA"
                     /locus_tag="RPW04_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002944071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HDX6295128.1"
                     /translation="MEKIRNIAVIAHVDHGKTTMVDELLKQSGTFTEHQAVGERVMDS
                     NDIERERGITILSKNTAIRYKDHKINIIDTPGHADFGGEVERVLKMVDGVLLLVDAQE
                     GVMPQTKFVVKKALSLGLRPIVVINKIDKPAADPDRVINEIFDLFVALDATDEQLEFP
                     VVYAAAKNGYAKLKLDDENVDMKPLFETILAHVPEPTGKDDNPLQLQVFTLDYDNYVG
                     KIGIARIFNGKISKNQNVMLAKADGTKTTGRISKLIGFFGLDRMDINEAGTGDIVAIA
                     GFETLDVGDSVVDPNNPMPLDPLHIEEPTLSVVFSVNDSPLAGTEGKFVTSNKIDERL
                     ESEMKTNIAMKYENIGEGKFKVSGRGELQITILAENMRREGFEFCLGRPEVIIKVIDG
                     VRCEPYELLVIDSPDDCTGTVIEKLGKRKAEMVSMNPTGDGQTRIEFEIPARGLIGFR
                     SQFLTDTKGEGVMNHSFLEFRPLSGSVEHRSNGALVSMESGVALAYSLFNLQDRGILF
                     CDPQTKVYVGMIIGEHSRPNDLDVNPIKGKNLTNVRASGSDDAIKLVPPRKHSLERAL
                     EWIEEDELVEVTPISIRIRKRYLDPTMRKRMAKSKE"
     gene            complement(3036..4238)
                     /locus_tag="RPW04_001034"
     CDS             complement(3036..4238)
                     /locus_tag="RPW04_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HDX6295129.1"
                     /translation="MQNYTKIHGFSKFKIIFILALMSAIAPLSTDMYLPALKSVQESF
                     NTSEFLTQLSIATFFIAFAFGQLIYGPLSDIFGRKKPLIVGIVIFMFSSLGCVLVDNV
                     ELFIVFRFLEALGGCAGVVIARAVVNDLFELKEAGAVFALMMVVSSLAPMLSPTFGSL
                     LLKIFSWQSIFVTLFLLGVLLIFLVVFVLKESASISNKVKFSQKEIIKNYAFVLKDRP
                     FLVYIFSSGFAMGAIFAYITGSSFVFIKSFGLSEQTYGFLFGLNSLGFIIAANINAKL
                     VLNYSPYILLPKAFFAMLTFGAALIFCSFLGFYAFEISLFFIISMLGFIMPNTTTLAM
                     ARFRDHSGTASALLGTLQFAIAGLVSFIVGFVQANTPFLLSVMIFGCIFLAFFTYFFI
                     GKMVLKDE"
     gene            4398..5999
                     /locus_tag="RPW04_001035"
     CDS             4398..5999
                     /locus_tag="RPW04_001035"
                     /inference="COORDINATES: protein motif:HMM:NF014207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HDX6295130.1"
                     /translation="MQTLNALLNNTASSTMQTKPSDSHESSNDSFLSMVINSVNKNEN
                     ISEESSKSVVEQNAKKSQIDKKDEKIDSKSNPDEIETEENSSQESPNKNSISILEDAD
                     FMQILSLLEALNDGKKLDKFPALSNTLAKFLSTEKNINEIKGAKSLQDIINLSNKFGL
                     GLSNLKITKEDLATLKTEFKALEAKGFFKIQDTQIVLNEVTKQKIEKSLKIDKKSDES
                     TPSLTKLLQSTQTIDDASGKKTKNKTETNNIKEATEDTINLKNTDKSKISVEQAEQKN
                     SKKADLNGEKNAIQNTKNIETELTKNDKHTKDTSGATANHTSQKNAKDTNVDDYLANI
                     MQRAIKESSETKDKQSQTTLSGSFTKETKNSGEKDNMQNNSDQNGSQTSSNQSVKDVV
                     ANSKLQLKNGQIKQTFESFASNLQEKIAEYKPPVTRFHMTLNPTNLGEVEVTLINRGN
                     NLHINFNSNNQTMQLFIQNQAEFKNSLVNMGFTELSMNFSDQNKNKEQGQNSKFKNYD
                     NDFENVLNQNEDEQVILEVVVPRYF"
     gene            6057..6848
                     /locus_tag="RPW04_001036"
     CDS             6057..6848
                     /locus_tag="RPW04_001036"
                     /inference="COORDINATES: protein motif:HMM:NF009452.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod modification protein"
                     /protein_id="HDX6295131.1"
                     /translation="MAINSMNNTATPTGTQFTTDKWAAQTEAEKLNNASGTGTNPYSQ
                     LDKDAFLKLLLVELQYQDPTEPMDSAKMLEQTSQLATLEMQENTNKVMKQLTTQMQSS
                     LSMTAMSALGKMANLSNAVSKDTTTSSVDFSLYFPNDVKSVSIQIYDSSENLVKNIKF
                     DELKSGINKFNWDGTDNNGDITLPGEYLIKATYTDTSGNSGESILGSYPVEAVKFVNG
                     IAQIKIAGEYVSMDKISEFTEPVKTTAVNNSNDSSNSNDSEKPSS"
     gene            6845..8485
                     /locus_tag="RPW04_001037"
     CDS             6845..8485
                     /locus_tag="RPW04_001037"
                     /inference="COORDINATES: protein motif:HMM:TIGR03506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HDX6295132.1"
                     /translation="MMIGYYNGISGIKSGNFGIDVISNDISNINTVGYKSSTAEFKSI
                     LYQSLNQTSTSPVTSQIGLGSTSMATSLNFKPGSLQNTDKVFDLAIVGDGFFGLSGIN
                     GEQYFTRNGDFSKDVNGDIVNRNGLYLLGTMANLNAIALSPNAEQKLGNLMGNNDKQA
                     FTLQTGTSIELSASTAQTKIHLPDVLFLPSTATTDVSFSGNLDSTINTQTININLDNT
                     KITTAINKEGKTISLNGSLADTPLVQNPNSPNEDVLITIKDANGESITTAAKTDENGN
                     FSLNDFDIRSLNLDGELSIEANVNLKQEVPNTQSFSTDIISPNGNKNILKMEFSKQVP
                     HLDNGTAWNVSATIFSPTNEVISTSNGVLNFNEKGALVSNTLGTLDNDGAELNVNLGT
                     PYDPNTPNSGFDGMRSTGDQNLNLSVNKNGEAEGLLKEYTMNDNGEVVAIFDNGKMAS
                     VAKVALYHFQNNQGLSKSSENTYQTTANSGQPIFYQDQNGNVVYGAAIKNSTLEMSNV
                     DLGVSLTDLIIMQKAYDASAKSITTSDQMIQKAINMKK"
     gene            complement(8486..8908)
                     /locus_tag="RPW04_001038"
     CDS             complement(8486..8908)
                     /locus_tag="RPW04_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295133.1"
                     /translation="MNYKFHFLSVFREIFIPHHRSLEFRAKVLAAMLCAKKTVLQSDY
                     NDIKDIATEIYINDERRVGVLVQTVKEYVQKVKEFSYISLDSLLIDIDYNLKNLRRYA
                     KKIDFAHLRRLMIDSDEDDALLQQRVYEYFLSEVRRYS"
     gene            8957..9054
                     /gene="ffs"
                     /locus_tag="RPW04_001039"
     ncRNA           8957..9054
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="RPW04_001039"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            complement(9059..10279)
                     /locus_tag="RPW04_001040"
     CDS             complement(9059..10279)
                     /locus_tag="RPW04_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HDX6295134.1"
                     /translation="MINAKLIDHIFKAASISRWNDYPKMVNLVELDKQAHKFIIAYFI
                     AKLEPDVDMNYIIEGGVFEFLSRVVVTDIRPDVFHQIQKSKNQEIQSWILTKLENMVE
                     DIDGGKFFERFKAYQDDKTHKKERLILKAASYIATKWEFSIVYQTSKFLSDIEELKQK
                     VDEELEDYYELIGVRKIAMNQKLARIIDLSGRLRFQKRWAQTQRIPETAVLGHMLVVA
                     IFAYFYSLKVGTCPKRLENNFYCALFHDLPESLTRDIISPVKYGINGLNEIISEYEMR
                     LIDERILPFVPESFRSEFSYILGVRKEESVLKKDEFENRINKTTPIHFEGSMSSVNDN
                     EFNAIDGKALKCCDNLAAFVEAGISISYGVKSKDLVSGFNNIQAKFDKNPKIEGVDFS
                     KICAEIIEYFDIRL"
     gene            complement(10289..10729)
                     /gene="queF"
                     /locus_tag="RPW04_001041"
     CDS             complement(10289..10729)
                     /gene="queF"
                     /locus_tag="RPW04_001041"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDX6295135.1"
                     /translation="MENKKYGEKIINEFDIEKDLEIWPNSSKNDYAIRITLPEFACFC
                     PRSGYPDFATIYLTYVPRDFVVELKAIKLYINSFLNRHISHEASINEIYDTLDKKLNP
                     KYLRVVGDFNPRGNVHTVIELDSNLVRKEKFDVSSITLETTRKF"
     gene            complement(10732..12114)
                     /locus_tag="RPW04_001042"
     CDS             complement(10732..12114)
                     /locus_tag="RPW04_001042"
                     /inference="COORDINATES: protein motif:HMM:NF012772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HDX6295136.1"
                     /translation="MLYSQQKERSNRFALALRIATPFIIILFIWGYAFVNLKNYKIYE
                     IILFALLTFIYVYYTFYMIYNGFNTSLIDQSTGSFTRDKIIKIINKSIKNGEKKYIIM
                     ISIKNLNEIANKYGLGSVDKVSKQFLEKLHSFLEKNSIRKVPIGKYIDGCFILLIDSK
                     FSKFNNLLKSFELSILRDNIDNIELNLAYNNIRSDYDLNLNVTLSTLFYMILDRQNEL
                     KINESKYEKMIFEALRDKNFIFKFQTIKSNKNSDDMTYVMQRLKLPNSNISKIKFSQV
                     INRIGYEIFYDKEVLRLFFSRISKDIKGKIFIEISPVSLRNYFFKAELFKMIKKYNIN
                     AKNLVFEFFEDKFYDEISNFNNIINEYKKFGFSFALSHFGGKNSSFEYLKYLNIDYII
                     YDIEFSKNLHKDRFKMLFNSVNSASKALDIKTIIRFISSNELYEIAKNSEVDYIQGFY
                     IEKPKLNLKD"
     gene            complement(12114..14435)
                     /gene="gyrB"
                     /locus_tag="RPW04_001043"
     CDS             complement(12114..14435)
                     /gene="gyrB"
                     /locus_tag="RPW04_001043"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018137242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDX6295137.1"
                     /translation="MENLEKNYGAGNIKVLKGLEAVRKRPGMYIGDTNISGLHHMIYE
                     VVDNSIDESMAGYCDTINIELTREGSCIVTDNGRGIPVDIHPTEKISAATVVLTVLHA
                     GGKFDKDTYKVSGGLHGVGVSVVNALSKKLILNIKRDGNLYRQEFSKGIPQNILEAVK
                     TTNRTGTSVEFWPDDDIFEVTEFDKQILSKRFKELAYLNPRITINFKDQRDGFSETYH
                     FEGGLESFVTDINKSNPVSKAVSFSGGEEDVIVDFALLYNETYTENLLSFVNNIKTPD
                     GGTHEAGFRAGLTRAITNYIAANAAAREKDTKITGDDIREGLIAIVSVKVPEPQFEGQ
                     TKGKLGSSYVKPIVQKMTFDVLCKYFEENPIEAKAIMNKALMAARGREAAKKARDLTR
                     KKDSLNSVGTLPGKLADCQSKDPSESEIYLVEGDSAGGSAKQGRDRAFQAILPLRGKI
                     LNVEKSRLDKILKSEEIKNMITAFGCGIGEEFDPEKLRYHKIIIMTDADVDGSHIQTL
                     LLTFFFRFLTPIIENGYVYLAQPPLYRYKKGKKEIYLKDEKALNEFLIETGIEGEDFE
                     GVGNKDLIDYLKIIAAYRSILMDLKKRFNVLIVIRYMIENPDVIAKNYNELFEIIKKK
                     LEDEKFNILNSYVNEDEIRIYVQTENGLEELVINDNLFANPLYEEAVHIFTKMKERDI
                     DLKRDPVEVLEDIEKNAKKGAYIQRYKGLGEMNPSQLWETTMNPENRRLLKIDVSNLQ
                     TASEIFELFMGDEVEPRRDYIQAHAKDVKHLDV"
     gene            complement(14444..15514)
                     /locus_tag="RPW04_001044"
     CDS             complement(14444..15514)
                     /locus_tag="RPW04_001044"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDX6295138.1"
                     /translation="MKVLIKKNVLESIVINTNPYLDKKDLSSITSHIFLSARDGVLNI
                     KATDNEIGLEYKVKNATIADEGMATANGKKLLDIIKSLKDGDIMLETIQNHLYIKQNN
                     SKYRLPMQKPEDFPEFPSLENKKKFDINAGSLSKSLKKISSSIENVNSKIELTGALID
                     IKKDHINLVGTDTKRLSVYQLEINSQNDPFSIIIPKKAITEIQKLFFENIEIYYDENI
                     FIAVSQNFEFFTKLINGRYPDYTRVVPNEIKQNIILNREKIIEGIKTISMLSEIVKIT
                     IAPDNISFESINDDNSEAKTFIEYRSNVSDQIILGVKNRFILDFLSSIEDSEFNLGYN
                     EPNLPFILSSGDLRTVVMPVNI"
BASE COUNT         5463 a         2705 c         2247 g         5182 t
ORIGIN      
        1 ttaagcgaat ttgagaacga aaatctaata aatttcgtac atcacataga tgaaaaaagc
       61 agtcttaaga gagtttattt tagcgatttt ggatttaaga atgctcttgg ttatgaaaaa
      121 gatccaaaaa aaacagttgc taatatggtt ttttgtgagc ttttaaaact agaaaatgaa
      181 ctatttttta gcgatgagat agattttttc attcctaaaa aaaatttagc gattttagta
      241 attccgtttt taccgccaga atttatattt cttaaattta aaaaatctat aaattactat
      301 aaaaatttag ggatcacaaa agtcgaagtc ataagcaatt caaataactc gaacattgct
      361 tttgaaggaa tcagatgctc cgttatgcca ttttggcaat gggcagtagc tctataaatc
      421 aaaaaaaggc ttgaatataa attaaatatt tgctatttta aaagctttta aacagctcta
      481 aaactgcgtt tatgcctgat ttaaatttaa aaatatctac tccttcatca ctaataggag
      541 tttttaaatt tagtgataaa ctatcgcctt ggctatttat atataataaa attttattat
      601 ctgaaataaa ataactgata tctgagccaa aaatatcttt taaatttgag atatccaaac
      661 tatttttatc catacttaaa gtttttttaa atttagaact cgcgaaaagc ccgtaaaata
      721 gcgtatttga gctattcgta tcttttaaat atacatcgta aaatttgata ttaaaactat
      781 caaactcagc ttgacaaatt ttataagagt taaacaaaat atctgttttt ggaaaattat
      841 ttttaccttc taaaaactca ttttcgtcaa gctcgtcttt taaagctttt aaattcatgc
      901 ttataagaat ttgagctaaa actcgctcct ttaaatcatg ttcaaaatct tttgtaattt
      961 taaatttaaa atgatagtag acaaaaagcg ttataaaaat agcagctatt atcgccataa
     1021 cagcgtcaaa tttaaagagc aaagcagccg ccaaaaaacc gaaggcggcg gctatgacta
     1081 aaacggcaaa aagctttagc cttaaccgct ttctagttat ttcaagctct tttaaactca
     1141 ttattcttta gatttcgcca ttctttttct catggttgga tcaaggtagc gtttgcggat
     1201 acggatactt ataggagtta cttctacaag ttcgtcttct tctatccact caagagcgcg
     1261 ctctaagcta tgtttgcgcg gcggaactag ttttatagcg tcatcacttc cgcttgcgcg
     1321 tacgtttgtt aagtttttac cttttatagg attgacgtca agatcatttg gacgactatg
     1381 ttcaccgatg atcatgccaa cataaacttt ggtttgagga tcgcaaaata aaatacctct
     1441 atcttgcaaa ttaaatagcg aatacgccaa agccacgccg ctttccatac taactaaagc
     1501 gccgttactt ctatgttcta ccgaaccgct taatggacgg aattccaaaa agctatggtt
     1561 cataacaccc tcgcctttgg tatcagttaa gaactggctt ctaaagccga taaggccgcg
     1621 cgcaggtatc tcaaactcga ttctagtttg tccgtctcca gttggattca tacttaccat
     1681 ttcggctttt cttttgccta atttttcgat aacggttcca gtacaatcat ctggggagtc
     1741 gataacaaga agttcataag gttcacatct tacgccgtct ataactttta tgataacttc
     1801 aggtctacca agacagaact caaagccttc tctacgcata ttttcagcca aaatagtgat
     1861 ctgcaattca ccacgaccgc ttactttaaa tttaccctcg cctatatttt cgtatttcat
     1921 agcgatattt gtcttcattt cgctctctaa gcgctcatct atcttatttg aagtgacgaa
     1981 tttgccttct gttccggcta atggagagtc atttacgcta aatacgacgc taagtgtcgg
     2041 ctcttcgata tggagcgggt caagcggcat aggattattt ggatcgacaa cgctatcgcc
     2101 cacatcaagc gtctcaaatc ccgcgatagc cacgatatca ccggttcctg cttcgtttat
     2161 atccattcta tcaagtccga aaaatccgat aagtttgctt atgcgtccag ttgtttttgt
     2221 accatcagcc tttgctagca taacgttttg atttttactg attttaccgt taaatatacg
     2281 agcgatgccg atcttgccga cgtaattatc gtaatctaga gtaaaaactt ggagttgaag
     2341 aggattgtcg tcttttccag ttggctctgg aacatgagct aagatagtct caaaaagcgg
     2401 tttcatatct acgttttcat catcaagttt aagctttgcg taaccgtttt tagcagcggc
     2461 gtaaactacc ggaaattcca gctgttcatc agtcgcgtca agtgcgacga atagatcgaa
     2521 aatttcgttt ataaccctgt ctggatctgc tgctggtttg tcgattttgt ttataacgac
     2581 tatcggacga agacctaagc taagagcttt ttttacgacg aatttagttt gaggcataac
     2641 gccttcttgt gcatctacaa gaagcaaaac accatctacc atctttaaaa cacgctcaac
     2701 ttcaccgccg aaatcggcgt gtcctggagt atctataatg tttattttat gatctttata
     2761 acgaatcgct gtatttttac taagaattgt aattccacgc tcacgctcaa tatcattgct
     2821 atccatcacc ctctcaccta ctgcttgatg ctcggtaaaa gttcctgatt gttttaggag
     2881 ttcatcgacc atagtagttt taccgtggtc aacgtgggcg ataactgcaa tatttcttat
     2941 cttttccaac tgctttcctt gattttttta aatttagggg tagattatac cctaaatttt
     3001 ctaaatcttt tatatgatga aatttcttta taaatttact catcttttaa aaccatcttt
     3061 ccaataaaaa aataggtaaa aaaagctaaa aatatacatc caaatatcat tacagaaagt
     3121 aaaaacggtg tatttgcttg aacaaatcca actataaaag ataccagtcc ggctatagca
     3181 aactgtaatg tgccaagtaa agcagaagct gtaccggagt gatctctaaa tctagccatc
     3241 gctaaagtag ttgtgttagg cataataaaa ccaagcatag aaatgataaa aaatagagat
     3301 atttcaaacg cataaaagcc taaaaatgag caaaatatca gagctgcacc aaaagtaagc
     3361 atagcaaaaa atgccttcgg aagcaaaata taaggagaat aatttagaac taattttgca
     3421 ttgatatttg cagcgattat aaaaccaagc gagtttaacc caaataaaaa cccataagtc
     3481 tgctcagaaa gcccaaagct ttttataaat acaaaagaag agccggtaat ataagcgaaa
     3541 atcgcaccca tagcaaatcc ggatgaaaat atatagacta aaaacggtct atcttttagt
     3601 acaaaagcgt aattttttat aatctctttt tgtgaaaatt taactttatt tgatatggac
     3661 gcactctctt taagtacaaa aacaactaaa aatatgagca aaactcctaa taaaaataga
     3721 gttacaaata tactttgcca cgaaaaaatc tttaaaagca aactaccaaa agttggagag
     3781 agcataggag ctaaactaga aactaccatc attaaagcaa atacggctcc ggcttctttt
     3841 aattcaaata gatcatttac cacggcccta gctataacaa ctccggcgca acctccaaga
     3901 gcttctaaaa agcgaaatac gatgaaaagt tctacattat cgactaaaac acatcctaaa
     3961 cttgagaaca taaaaatcac tataccgaca ataagaggtt ttttacgacc gaaaatatca
     4021 cttaatggtc catatatcaa ctgtccaaat gcaaaagcta tgaaaaaagt agcgatagat
     4081 aactgagtaa gaaactcgct tgtgttaaaa ctttcttgaa cactctttaa agcaggaaga
     4141 tacatatcgg tagaaagtgg tgctatagct gacataagag ccaagataaa aataatttta
     4201 aatttagaaa atccatggat tttcgtataa ttttgcatat atctccttta aaaaataaaa
     4261 ctgtttagta tatcttaaaa aacttaaaga gtaatttgta ttacatttaa ttattttata
     4321 aatttcggat gaaatgagtc gtttggaata atttttgcta gtgaataaca gcagatttta
     4381 attatttagg actatttatg caaacactaa acgcattact aaacaatact gcatcaagta
     4441 cgatgcagac aaaaccgagt gatagccatg aaagtagcaa tgatagcttc ttgtctatgg
     4501 ttataaatag cgtaaataaa aatgaaaata ttagcgaaga gagcagcaaa agcgtagtag
     4561 aacaaaatgc aaaaaagtcc caaatagata aaaaagatga aaaaatagac tcaaaatcca
     4621 atccggatga aatcgaaaca gaagaaaatt catctcaaga aagcccaaat aaaaatagta
     4681 tatctatctt agaagatgct gattttatgc aaattttatc gcttcttgaa gcattgaatg
     4741 acggaaaaaa acttgataaa tttccggctc tttcaaatac tttagcaaaa tttttatcaa
     4801 cggaaaaaaa tataaatgag ataaaaggtg caaaaagctt acaagatata ataaatttga
     4861 gcaataaatt tggattaggt ctaagtaatt tgaagattac gaaagaggat ttagcaactc
     4921 taaaaaccga gttcaaagct cttgaagcaa aaggattttt taaaattcaa gatacgcaga
     4981 tagttttaaa cgaagtaaca aaacaaaaaa tagaaaaatc attaaaaata gataaaaaaa
     5041 gcgacgaatc aacccctagt ctaacaaaac ttcttcaaag tacgcaaaca atcgatgatg
     5101 caagcggaaa aaaaaccaaa aataaaactg aaactaataa cataaaagaa gctacagaag
     5161 atactataaa tttaaaaaac acggataaat caaaaatttc agtagagcaa gcggaacaga
     5221 aaaatagcaa aaaagcagat ttaaacggtg aaaaaaatgc aattcaaaat acaaaaaata
     5281 tcgaaacaga actaactaaa aacgacaaac atacaaaaga tacaagcggt gcgactgcaa
     5341 atcatacatc tcaaaaaaac gcaaaagata cgaatgtaga tgattatcta gcaaatatta
     5401 tgcaaagagc tataaaagaa agtagcgaaa caaaagataa acagtctcaa actacactta
     5461 gtggcagttt tacaaaagag acaaaaaata gcggtgaaaa agataacatg caaaataaca
     5521 gcgatcaaaa cggcagtcaa acaagctcaa atcagtcggt aaaagatgtg gtcgcaaact
     5581 ctaaactcca attaaaaaac ggtcaaatca aacaaacttt tgagagtttt gcttcaaatt
     5641 tacaagaaaa aatagctgaa tataaaccac ctgttactag atttcatatg acactaaatc
     5701 cgactaatct aggcgaagta gaggtgactt tgataaacag aggaaataat ctacatataa
     5761 atttcaactc aaataatcaa actatgcagc tatttatcca aaatcaagcc gaatttaaaa
     5821 atagccttgt aaatatggga tttactgaac tttctatgaa ttttagcgat caaaataaaa
     5881 ataaagaaca aggtcaaaac agtaaattta aaaactatga caatgatttt gaaaatgtat
     5941 taaaccaaaa tgaagatgaa caagtcatct tagaagttgt cgtaccgcga tacttttaag
     6001 ttaaaaagga atgaattttg cttaaaatag caaaattgca tataaaagga taatccatgg
     6061 caataaattc tatgaataat acggcaactc caaccggaac tcaattcacg acagacaaat
     6121 gggcagcaca aacggaagca gaaaaattaa ataacgccag tggaacaggt acaaatccat
     6181 attcacagct tgataaagac gcatttttaa aactacttct tgtcgaactt cagtatcaag
     6241 acccaacaga gcctatggat agtgcaaaaa tgcttgagca aactagtcaa ttagccactc
     6301 ttgaaatgca agaaaataca aataaagtta tgaaacaact aacaactcaa atgcaaagca
     6361 gcctttctat gacagctatg agtgcgcttg gaaagatggc aaatctctcg aacgcagtgt
     6421 caaaagatac tacgactagc tctgtggatt ttagtttata ttttcctaat gatgttaaat
     6481 cagtcagcat tcaaatatat gattcatcag aaaatttagt aaaaaatata aaatttgatg
     6541 agttaaagtc cggaataaat aaatttaact gggacggcac tgataataac ggagatataa
     6601 ctttaccagg agaatatctg ataaaagcaa catatacaga tacatcaggc aattcaggag
     6661 aaagcatatt aggaagctat cctgtagaag cggttaaatt cgtaaatggc atagctcaaa
     6721 tcaaaatagc cggagaatac gtatcaatgg ataaaataag cgaatttaca gaaccggtta
     6781 aaactacggc agtaaataac tcaaatgatt catctaactc aaatgattcg gagaaaccaa
     6841 gctcatgatg ataggatact ataacggtat aagcgggata aaatctggaa atttcggtat
     6901 cgatgttata tcaaatgata tttcaaatat caatactgta ggatacaaat caagcaccgc
     6961 tgagtttaaa agcatactat atcagtcact aaaccagaca agcacaagtc cggtcacatc
     7021 acaaatcggt cttggctcaa cgagtatggc aactagttta aatttcaagc caggaagcct
     7081 acaaaatacc gataaagtat ttgatctagc tatagtagga gatggatttt ttggacttag
     7141 tgggataaac ggtgagcagt attttactag aaacggtgat tttagtaaag acgtaaatgg
     7201 agatatcgta aatagaaatg ggctttatct actaggtacg atggcaaatt taaacgcgat
     7261 agctcttagt ccaaatgcgg agcaaaagct aggaaatctt atgggaaata acgataaaca
     7321 agcatttact ctacaaacag gtacttcaat agagttaagt gcttctacgg cgcaaacaaa
     7381 aatacatttg ccagacgtgc tatttttacc ttctactgca acaacagacg tatcatttag
     7441 cggtaatctt gactctacca taaatactca aacgataaat ataaatttag ataatacaaa
     7501 aattacaacg gcaataaata aagaaggtaa aaccataagt ttaaatggat cgctagcgga
     7561 cactccatta gtacaaaatc caaatagccc aaacgaagat gtactaatca ctataaaaga
     7621 tgctaacggc gaatccatca caaccgcagc aaaaacagat gaaaacggta attttagctt
     7681 aaatgacttc gatataagaa gtttaaattt agatggtgaa cttagcatag aagcaaatgt
     7741 aaatttaaaa caagaagtac caaatactca aagttttagt acagatataa tctctccaaa
     7801 cggcaataaa aatatattaa aaatggagtt ttcaaaacaa gttccgcatc ttgataacgg
     7861 aacagcatgg aatgttagtg ctactatttt ttctcctact aacgaagtta tatcgacttc
     7921 aaacggagtt ttaaatttca atgaaaaagg tgctttagta agcaatactt taggaacttt
     7981 agataatgat ggagctgaac taaacgtcaa tttaggtact ccatatgatc caaatactcc
     8041 aaatagcgga tttgacggta tgagatcaac gggggatcaa aatttaaact tatctgtaaa
     8101 taaaaacggt gaagcagaag gtttgctaaa agaatatact atgaatgata acggtgaagt
     8161 tgtagctata tttgacaacg gtaaaatggc ttctgtcgct aaagttgccc tatatcattt
     8221 ccaaaataat caaggtcttt caaaaagcag cgaaaataca tatcaaacaa ctgcaaactc
     8281 aggtcaacct atattttatc aagatcaaaa cgggaatgta gtttatggag cagctataaa
     8341 aaatagcact cttgaaatga gtaatgtaga tcttggcgta tctttaaccg atcttatcat
     8401 tatgcaaaaa gcttatgacg caagtgcaaa atcgatcact acaagtgatc aaatgataca
     8461 aaaagcgata aatatgaaaa aatagttatg agtatctcct aacttcgctt aagaaatact
     8521 cataaactct ttgttgcaaa agagcatcat cttcatcact atctatcata agacgtctta
     8581 aatgagcaaa atctatcttt ttagcatatc ttcttaaatt ttttaaatta tagtctatgt
     8641 ctataagcaa tgaatcaaga cttatataac taaattcttt tactttttga acatactctt
     8701 ttacggtttg taccaaaaca ccgacacgtc tttcatcgtt tatataaatt tctgttgcaa
     8761 tatcttttat atcgttataa tcactttgta aaacagtttt tttagcacaa agcatagcag
     8821 ctaaaacttt agcacgaaac tctaaagagc gatgatgcgg tataaaaatc tcacgaaaaa
     8881 cagacaaaaa atgaaattta taattcatag cgtaatccta atttaagtat aatttagata
     8941 taatcctttt cgcctttcct tagacctgtg caatgctttt aaaaagaacc gcttcaggat
     9001 gggaacatag cagagcactt tttcttagtg tgtgccgcag tcatctgggg aagggtttct
     9061 aaagtcttat atcaaaatac tctatgatct cagcacaaat tttactaaaa tcaacgcctt
     9121 ctatctttgg atttttatca aatttagctt gtatgttatt aaatccgctg actaaatcct
     9181 tgctttttac accgtaactt atagaaattc ccgcttctac aaatgcagct agattatcac
     9241 agcattttag agctttacca tctatagcgt tgaactcatt atcatttacg ctgctcatac
     9301 taccttcaaa atgtatcgga gtagttttat ttatacggtt ttcaaactca tcttttttca
     9361 aaacactctc ttcttttcta acgcctaaaa tgtagctaaa ctcacttcta aaactttcag
     9421 gaacaaaagg taaaattcgc tcatctataa gtctcatctc gtattcgctt attatctcgt
     9481 ttagtccatt tataccgtat tttacaggac ttatgatgtc acgcgtaagg ctttctggta
     9541 agtcgtgaaa caaagcgcaa taaaagttat tttcaagtcg ttttgggcaa gtccctactt
     9601 tcaagctata aaaataagca aatatcgcca cgactagcat atgtccaagc actgcagtct
     9661 caggaatgcg ctgagtttgt gcccaacgct tttgaaaacg aagtcgtccg cttagatcta
     9721 tgatacgagc tagtttttgg ttcatagcga ttttacgaac tcctataagc tcgtagtaat
     9781 cttctaactc ctcatcgact ttttgtttta actcttctat gtcgcttaga aatttactag
     9841 tttgataaac tatgctaaac tcccatttcg tcgctatata gctagccgct tttaatataa
     9901 gacgctcttt tttatgagtt ttatcatctt gataagcttt aaacctttca aaaaatttac
     9961 ccccatcgat atcttcaacc atattttcaa gtttagttaa aatccagctt tgaatttctt
    10021 gatttttgga tttttggatt tgatggaaaa catcagggcg aatgtcagtc actactacac
    10081 ggcttaaaaa ctcaaaaaca ccgccttcta tgatatagtt catatccacg tcaggctcga
    10141 gctttgcgat aaaataagct attataaatt tatgtgcttg tttatcaagc tcgactaaat
    10201 ttaccatttt tggatagtca ttccaacgcg aaatcgaagc agctttaaag atgtgatcta
    10261 tgagtttagc gtttatcatt tttgagcctt aaaatttgcg agtagtttct aaagtgatag
    10321 aacttacgtc gaatttttct ttgcgaacta aatttgagtc caactctata accgtatgca
    10381 cgtttccacg cggattaaag tctcccacta cgcgtaaata ctttggattt aactttttat
    10441 ctaaagtatc atagatctcg tttatgcttg cttcgtggct tatatgacga tttaaaaagc
    10501 tatttatata gagttttatc gcttttagtt caacgacaaa gtcacgcggc acgtaagtta
    10561 gatatatagt agcaaaatca ggatatcccg agcgcggaca aaaacacgcg aactcaggca
    10621 aagttatgcg aatagcatag tcgtttttac tagagtttgg ccaaatttca agatcttttt
    10681 ctatatcaaa ttcatttata attttttcac catatttttt attttccata tttaatcctt
    10741 taaatttaac ttaggttttt caatgtaaaa accttggata taatcaactt cactattttt
    10801 tgctatttca taaagctcat tactacttat aaatctaata attgttttta tatcaagagc
    10861 ttttgaagcg ctatttacac tattaaataa cattttaaat ctatctttat gtagattttt
    10921 actaaattca atatcataaa ttatataatc aatatttaaa tatttaagat actcaaagct
    10981 actatttttt ccaccaaaat ggctcaaagc aaagctaaat ccaaattttt tatactcatt
    11041 tataatattg ttaaaatttg aaatttcatc ataaaattta tcctcaaaaa actcaaaaac
    11101 taaattttta gcatttatat tatacttttt tatcatttta aaaagctctg ctttaaaaaa
    11161 gtagtttctt agactaacag gagaaatttc tatgaaaatt ttacctttta tatctttgct
    11221 aattctacta aaaaacagcc ttaaaacctc tttatcataa aatatctcat aaccgattct
    11281 gtttataact tgggaaaatt tgatttttga tatatttgag ttcggaagtt ttagtctttg
    11341 catcacatat gtcatatcat ctgagttttt attacttttt atagtttgaa atttaaaaat
    11401 aaaattttta tcgcgcagtg cttcaaaaat catcttttca tatttgcttt cgtttatttt
    11461 tagctcattt tgtctatcta aaatcatata aaatagagtt gaaagagtga cattcaaatt
    11521 taaatcataa tcagatctaa tattattgta agctaaatta agctctatat tatcgatatt
    11581 atctcttaaa atactaagct caaagctttt taataagtta ttaaatttac taaatttaga
    11641 gtcgataagc aaaataaaac atccatcaat atatttaccg ataggaactt tgcgaatact
    11701 atttttttcc aaaaaactat ggagtttttc taaaaattgt tttgaaactt tatcaacact
    11761 tccaagcccg tatttattag caatttcatt taaatttttt atagatatca taatgatata
    11821 ctttttttca ccgtttttaa tgcttttatt tataattttt ataattttat ctcttgtaaa
    11881 acttcccgta gattgatcaa taagacttgt attaaatcca ttataaatca tataaaaagt
    11941 ataataaaca tatataaatg tgagcagagc aaatagaatt atttcataaa ttttatagtt
    12001 ttttaaattt acaaacgcat aaccccaaat aaataaaata atgataaaag gagtagctat
    12061 cctaagagca agagcaaagc ggttacttcg ctctttttgc tggctataaa gcattaaacg
    12121 tccagatgtt ttacatcttt tgcatgagct tgtatataat ctcgtctagg ttcaacctca
    12181 tcacccataa agagttcaaa aatttcacta gctgtttgaa gattgctaac atctattttt
    12241 aaaagtcgtc tattttctgg attcatagtt gtctcccaaa gttgactagg attcatctct
    12301 ccaagacctt tgtaacgttg tatataagca ccttttttag catttttttc tatatcttca
    12361 agcacttcta ctggatctct ttttagatct atatcacgct ctttcatttt tgtaaatata
    12421 tgaacagcct cctcataaag aggatttgca aataaattgt catttataac aagttcctca
    12481 agcccatttt cagtctgaac atatatccta atctcatctt catttacgta tgaatttaaa
    12541 atattaaatt tttcatcttc aagttttttc tttataatct caaaaagttc attataattt
    12601 tttgctataa catccggatt ttctatcata tatcttataa cgattagtac gttaaaacgt
    12661 tttttaagat ccatcaaaat acttctataa gccgcgatta tctttaaata atcaatcaga
    12721 tctttatttc caacaccttc aaaatcctca ccttcaattc cagtttctat aagaaattca
    12781 ttcaaagctt tttcatcttt taagtagatc tcttttttac cttttttgta tctataaaga
    12841 ggcggctgag ctagataaac ataaccattt tcaatgatcg gagttaaaaa cctaaagaaa
    12901 aaagtaagaa gtaaagtttg aatatggctt ccatctacgt ccgcatcagt cataataatt
    12961 atcttatgat atctaagttt ttcaggatca aactcttcac caattccgca tccaaatgcg
    13021 gttatcatat tttttatctc ttctgatttt aaaattttat caagtctact tttttctacg
    13081 tttaatatct tacctcgaag tggtaaaatc gcttgaaacg ctctatcacg accttgtttt
    13141 gcagagcctc cagcagaatc tccctcaaca agataaattt cactctcact tggatcttta
    13201 ctttgacaat cagctaattt tccaggaagc gttcctacgc tatttaaact atcttttttg
    13261 cgtgttaaat ctcttgcttt tttagctgct tcacgaccac gagcagccat aagagcttta
    13321 ttcattatag cttttgcttc gatagggttt tcttcaaaat atttacacaa aacatcaaaa
    13381 gtcatttttt gaacgatagg ttttacataa ctcgagccga gttttccttt agtttgacct
    13441 tcaaattgtg gttctggaac ttttacgcta actatagcta taagtccttc tcttatgtca
    13501 tctccggtta tcttagtatc tttctcacga gctgcagcat ttgcagctat ataatttgta
    13561 atagctcttg taagcccagc tctaaaacct gcttcatgag ttccaccatc tggagttttt
    13621 atattgttta cgaaacttag taaattttct gtatatgttt cattgtaaag tagagcaaaa
    13681 tccactataa catcttcttc accaccgcta aaactaactg ctttgcttac tggattactt
    13741 ttgtttatat ctgtaacaaa actttcaaga ccaccttcaa aatgataagt ttcactaaaa
    13801 ccgtctcttt gatctttaaa atttatagta attcttggat ttaaatatgc taattcttta
    13861 aatctttttg ataaaatttg tttatcaaat tcagttactt caaatatatc atcatcaggc
    13921 caaaactcaa cactagttcc tgttcgattt gtagttttta cagcttctaa aatattttgg
    13981 ggtattcctt ttgaaaactc ttgacgatat aaatttccat ctctttttat gttaagaatt
    14041 agtttttttg aaagagcatt tacaaccgaa actccaacac cgtgaagtcc tcctgaaact
    14101 ttataagtat ctttatcaaa tttaccacct gcgtgaagta cagttaaaac tactgttgct
    14161 gctgaaattt tttctgtagg atgaatatca acaggaattc cacgaccatt atcagtaact
    14221 atacaagaac cttctcttgt aagctctata tttatcgtat cacagtaacc tgccatagat
    14281 tcgtctatag agttatcaac tacttcataa atcatatgat gaagaccgct aatattcgta
    14341 tcgccgatat acattcctgg acgttttctt acagcttcaa gcccttttag tacttttata
    14401 tttccagcac cataattttt ttctaaattt tccattattt tccttaaata tttactggca
    14461 ttacaacagt tctaagatcg cctgaactta atataaaagg caaattaggt tcgttatatc
    14521 ctaagttaaa ctcactatct tcaatacttg ataaaaaatc aagtataaat ctgtttttaa
    14581 ctcctaaaat aatctgatca ctaacattac ttctatattc tatgaatgtt tttgcttcac
    14641 tattatcatc atttatactc tcaaaactta tattatctgg agctattgtt atttttacta
    14701 tttctgaaag cattgatata gtttttatgc cttctattat tttttctcga tttaaaatta
    14761 tattttgttt tatctcattt ggtactactc ttgtataatc tggatatctt ccgttaatta
    14821 gtttcgtgaa aaattcaaag ttttgtgata ccgctataaa tatattttca tcataataaa
    14881 tttcaatgtt ttcaaagaat aatttttgaa tttcggttat agcttttttt ggtattatta
    14941 tactaaaagg atcgttttga gaatttattt caagttgata aacgcttaat ctttttgtat
    15001 ccgtacctac taagtttata tgatcttttt ttatatcaat taaagctcct gttaattcta
    15061 tttttgaatt tacgttttct attgagcttg atattttttt aagactttta cttaaagatc
    15121 ctgcatttat atcaaatttc tttttgtttt ctaaacttgg aaactctgga aaatcctctg
    15181 gtttttgcat aggaagtcta tattttgagt tattttgttt tatgtaaaga tgattttgaa
    15241 tagtttctag cattatatcg ccgtctttta agcttttaat tatatcaaga agttttttac
    15301 cattagcagt tgccattcct tcatctgcta tagttgcatt ttttacttta tattcaagtc
    15361 ctatttcatt atcagtcgct tttatattta aaactccatc tctagcagat aaaaatatat
    15421 gagaagttat agaacttaaa tcttttttat caagataggg gtttgtgttt ataactattg
    15481 attcaaggac atttttttta attagaactt tcattttttt tgccttttaa atttaattta
    15541 tttttttatt tttagttgat atgttgattt tgtgaaaatc aacattaaac accgtaa
//
LOCUS       DAPPKW010000037        15578 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.037, whole genome shotgun sequence.
ACCESSION   DAPPKW010000037 DAPPKW010000000
VERSION     DAPPKW010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15578
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.037"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..668)
                     /locus_tag="RPW04_001045"
     CDS             complement(<1..668)
                     /locus_tag="RPW04_001045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295139.1"
                     /translation="MGKIVRVLLLFILSAFAFGADFSSWFGEFDTKFYSSAKQEQLRI
                     YHDLKGVYVHSILNDNKDLKIQTLLRLVDGSKKLGLDYKVYESELKNYENQDIISYDQ
                     TKELVKKPEKQTINKNIIPKVETSAKKIESKEQKVENEVQKSSSKENEDEVKKPLKVL
                     KFSSDDDSFVLSLNRDMDEKEIKTFELNTKELYKRIYDINAILTTQFKKPTQKISDDI
                     RVAQ"
     gene            complement(652..1764)
                     /locus_tag="RPW04_001046"
     CDS             complement(652..1764)
                     /locus_tag="RPW04_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HDX6295140.1"
                     /translation="MELKSLKIGKYEIKYPIIQGGMGLGISWDKLAGNVSLNGGLGVI
                     SSVGTGYYEHRSHIAKEINNKPYDSENFYSRDGFKAIIDNARKICGDRPLAANIMCAS
                     NDYARIVKDACEHGINIIISGAGLPTNLPELTKGFKDVALVPIVSSAKALKIICKRWH
                     LRYEKLPDAVVLEGPLSGGHQGFTYEQCIDPEFQLEKLIEPVVKEASEWEKIGGKPIP
                     VMAAGGIWDHGDIAKAISLGASGVQMGTRFIGTFECDASDNFKSVLLNAKKEDIKLIK
                     SPVGYPARGVRTNLIELVEKRSGPKIQCISNCVSPCCRGKEAKEVGYCIADRLYDAYS
                     GKKETGLFFTGANGYRLNEIISVKDLIKKLVYGENS"
     gene            complement(1764..2972)
                     /locus_tag="RPW04_001047"
     CDS             complement(1764..2972)
                     /locus_tag="RPW04_001047"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDX6295141.1"
                     /translation="MNNIDSIMQEIKKGVAEIIDFSRIKSLIKNYYENGKNFYIKAGF
                     DPTAPDLHLGHTVVLNKMRLLQKHGGIVQFLIGDFTAKIGDPSGKSATRKVLDDDTIA
                     KNAKTYKEQVFKILDESKTEVMFNSAWLSKLGADGLIALASTFNVARMLERDDFTKRY
                     KNETPIAISEFLYPLLQGYDSVAMKCDIEMGGTDQKFNLLMGRTLGRTYGIGKEQAII
                     MMPLLVGLDGVNKMSKSLGNYIGVTESANDIFAKTLSISDDLMWVWYELLSDKSSDDI
                     LNLKADVSSAKLHPKKVKENLALEITSRFHGISEAGAAKDEFDRVHSKKELPSDMPEF
                     EIVKDEIWIVEALSNCALCSSNAEARRHIKANAVSVNQQKVIDEQLKLAKGEYILQVG
                     KKTYAKLKVK"
     gene            complement(2974..5172)
                     /locus_tag="RPW04_001048"
     CDS             complement(2974..5172)
                     /locus_tag="RPW04_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HDX6295142.1"
                     /translation="MNQIDNGQILEQLIEEVVVSKNIESAKDVLYSVAKPTGMLLKAV
                     DYCVRLHEGQFRKSGEPYAIHPILVCSFVAHMGGDESMLIASLLHDVVEDTECSEDEV
                     RFEFGEEVTNLVRGLTKIVAIRENELASSNSNEKLAASALTFRKMLLVSIEDVRVLVI
                     KLCDRLHNMLTLEALRPDKQKRIAEETLVVYAPIAHRLGISAVKNILEDLSFKYVLPK
                     EYCVIDSYINEHKQQLQLKINSFSQKVGEKLLTSGFTEDSFEVQKRIKHYYSIYLKMQ
                     RKGISMEEVLDLLAIRIIVKNPKDCYLALGVLHMNFNPLISRFKDYVALPKQNGYQTI
                     HTTIFDNKSIIEAQIRTFDMHKTAEYGVAAHWKYKNGGLIAPKLDWLSDISAQEGDDK
                     SIEDLYEYAKDSLYVEDIAVYSPKGGIFTLPRGATALDYAYEIHSEVGLHAKEAYVNR
                     IRVPLLTELKNGDIIRIVTGNEAHYRCSWLSNVKTGKARATIRSFCRQKIREVNQQVA
                     MDILVGIFNVGERKILDWLESENLNKKIARAASDSVYLQDVVNALKKYPKQDKLFSLK
                     FADKYEVKKQKFDNIVVYSNHTIKGVEFDYCCNPKRGDDIIGFKNGHNVVVHHKLCER
                     AAKLMSDKEEMIFVKWTRNAPHRYKIILSIENKRGSLAAFLTYLAKLNVDLVTITLSE
                     SDDLIAADYFDVTIELNENLDSNMIRDKLKERYKIAEFKSLSDAYHNQGE"
     gene            complement(5156..5377)
                     /locus_tag="RPW04_001049"
     CDS             complement(5156..5377)
                     /locus_tag="RPW04_001049"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDX6295143.1"
                     /translation="MQRTEEIAAKALQVVGNDRYKLALLVAKRAEMLAEGAAPLVKIN
                     AAKMKFTDIALLEISEGKVLLEAFVESNR"
     gene            complement(5390..6106)
                     /locus_tag="RPW04_001050"
     CDS             complement(5390..6106)
                     /locus_tag="RPW04_001050"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDX6295144.1"
                     /translation="MSDKKRVLVKFSGEALAGGNGFGIDTHILKYIAGEIKGLVLNGI
                     EIGIVIGGGNIIRGVSAAKDGIIKRTSGDHMGMLATVINAIAMREALEYSGLSVRVQS
                     AIKMEAICETFIMGRAQRHLEKGRVVIFAAGTGNPFFTTDTAATLRAIEIDANMIIKA
                     TKVNGVYDRDPMKFEDAVLLNEISYERAMEDNIKVMDDTAIALAKDNKLPIVVCNMFE
                     EGNLLKIANGDYTNCSVVKN"
     gene            complement(6162..7367)
                     /locus_tag="RPW04_001051"
     CDS             complement(6162..7367)
                     /locus_tag="RPW04_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDX6295145.1"
                     /translation="MRFISLLLLFYVVLFGASVADKIQDKKETLSSAKKLETQLNKKL
                     EELVSDIIKGEADVKNTAIQIEELAKQVKELESSANDANAELNKLTSQNSDLIKNQKD
                     MEKRLIRIISEDFAYDLIIPNDYEESEESIIANEVLSKLNLVMQDEFKKIAKNYEQTV
                     NLIKSQSDKINSIKFDLREFKQKQAKLKSLQNKQKSNLSNLKQDKDIYSKKLAKLQDQ
                     QDELRKTLEKLQILAKKEDEKKETKQTKPNTPANANTGDIKQIGSSYKTSNVKKYVGE
                     KTIAPLDNFSVKQKFGDYVDPIYNIKIFNESIVLRSNEPDAKVKSVLAGTVVFAKDTP
                     ILDKVVIVENSDGIHTIYAHLDKIAPTIKVGSKIKKGYVIGRVKQDLTFEVTQKNYHI
                     NPLDLISLK"
     gene            complement(7364..8101)
                     /locus_tag="RPW04_001052"
     CDS             complement(7364..8101)
                     /locus_tag="RPW04_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HDX6295146.1"
                     /translation="MVDKIVSNYETTMGNDYNIIIVSENEISSDTIKQNIETFKDLIP
                     LDTKSVLDRLKNDVSTRNLSVLSNSLPKFYSLKLNSFPSSEYMSKIQSRLLKINGIKK
                     VETFSKTYDKVYKMLVLSKSIFEYFAVLIALMGVALIFKQMKIWLYEHKRRVEIMTLF
                     GAPYWLKSAMLYKLAIIDSIIATSLVTLFYAFIPALDIFQNAVFSIGFELPNLDLFSD
                     TVLLFSASIVVSIIAVSLVMLQSREPK"
     gene            complement(8163..8834)
                     /locus_tag="RPW04_001053"
     CDS             complement(8163..8834)
                     /locus_tag="RPW04_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002953262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDX6295147.1"
                     /translation="MQHIVEAKDLNIGYERDQNVINGANFNINVNDFVFITGKSGSGK
                     STLIKSMYGDISVNRGSLIVCLSELKDINRSSLALLRQRVGIIFQDFRLINEWNVEKN
                     VMLPLIIKGYNQSVCKKQAAKLLNHVNLLHKADKFPLELSGGEQQRVAMARALAHNPQ
                     LLLCDEPTGSLDEYSSDVIWSLLKSARDGLGTCVVVVTHKIPSSLRTEYRHFELLNGE
                     INEII"
     gene            complement(8819..10006)
                     /gene="trmB"
                     /locus_tag="RPW04_001054"
     CDS             complement(8819..10006)
                     /gene="trmB"
                     /locus_tag="RPW04_001054"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDX6295148.1"
                     /translation="MPNFVATSLKNLKFPFGADGVEFLWSAKAGDESLIYTKTGKKEF
                     FLLVKDKKTEFVVKSDKLTRPASLGTIQKALSVYKDLNVLDLKSSTIAIKNEKQLAKK
                     EFILNDIQFLEKLKSGEFKKIFVEIGFGSGRHLLYQAKTDENTLVVGIEVYKRSCEQV
                     NNLALSMGLKNVILLNLDARLVMSLLHSNSVDRLFLHFPVPWEKSEKRRVVSAEFANE
                     CQRVLKSGGSFELRSDDKNYTDFTISCFLNLKEAKMEIYKNRFLDVSSKYEDRWIKQN
                     RDIYDVVFTNLIVSEQKVLHGDFEFGTVLEEDILSKFENKTIKKDDYFIHMERIYKKD
                     SSEKNGGLLLRVAFGSFYRPEHCFILVENSKASYFIKKPLLTYENLKAHSTLKEYLSC
                     STS"
     gene            complement(10006..11220)
                     /locus_tag="RPW04_001055"
     CDS             complement(10006..11220)
                     /locus_tag="RPW04_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002953265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fibronectin type III domain-containing protein"
                     /protein_id="HDX6295149.1"
                     /translation="MKKLIPSLLALLFMALMSGCAYKVSQVNPNLPTINSLKTISDMT
                     QIAFEWNPVNDENIAGYYLYRSNPNEDGKMSVVANIKDRFATHYVDTNLAPSTEYSYE
                     LRSYDNNGDISNNGEIITVSTSKLIESVSFAQAVYGLPNRIKILWRPHPDPRVASYII
                     ERNNISSDKWYRIAEVKGRLNVEYIDDGLDPNHHYRYRILVKTVDGITSGPSAIISAQ
                     TKALPNLVLNLQATTNLPKKITLTWEPNTNDDFSHYNIYRSSNEIFPLLKLTETTSVQ
                     YDDLINENGAQMYYKVTAVDKDGLESPKQNNPVVGNTLTSPKSPIITGASFNGISIEL
                     SWSSGSDNRSVKYKILKSSAAGEEAIEDIVGNSYNDDQIQFGLEYTYKIVGIDEYGIN
                     SNESKQAIVVAK"
     gene            complement(11153..12124)
                     /locus_tag="RPW04_001056"
     CDS             complement(11153..12124)
                     /locus_tag="RPW04_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDX6295150.1"
                     /translation="MNEFISSNSARLDQILASYLSISRNQISELIKSGNVYVNDNLML
                     KPSFKVLLNDKIGFNLPKAKFENCEFKADFDVEILYEDDDILVLNKPSNLTVHPAPSV
                     KEATLVEWLKQNGYMLSTLNGDIRAGIVHRLDKGTSGVIVVAKNNASHSALAAQLSDK
                     SMGRVYLALIDFNLKDKLIIDRPIGRNPQNRLKNSVAANGRAAKSAFTNIICEDDLNL
                     IAAKLFTGRTHQIRVHLASINRHILGDNLYGFKSKNCKIKRVMLHAYILNLTHPKSGE
                     KMQFIAPLPTDFYDILSKKIDKEILNEKIDPEFISSAFYGFNEWMCL"
     gene            12176..13282
                     /locus_tag="RPW04_001057"
     CDS             12176..13282
                     /locus_tag="RPW04_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDX6295151.1"
                     /translation="MIRLDKRILTHFDFVQPILVLPIIILSYTLISEANDMLSSKQIV
                     YFSIGFLAFTFFFLMPIRKIEWLIPTVYWINIILLFSVDIFGVSKLGAQRWLEIPFVH
                     FTLQPSEIMKPSFILMLAYLIKRDPPGINGYNLKQFLKISIYILLPFGLILKEPDLGT
                     AMMLIITGYGILFIIGVNKKIWLTLAICIGVAAPVIYESLHDYQKKRIVDFLSKEPSY
                     QVRQSIIAIGNGGITGKSAEEATQTRFKFLPIATSDFIFAYTIERHGFIGGMVLILLY
                     GFLIAHLLSLNYKLKGNYFIKAVTSGISILIFIYVSVNIFMTIGFAPVVGIPLPFYSY
                     GGSSFVTFMCLFGILQNLLTFRFDPTYRFIKIKF"
     gene            complement(13279..13836)
                     /locus_tag="RPW04_001058"
     CDS             complement(13279..13836)
                     /locus_tag="RPW04_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HDX6295152.1"
                     /translation="MKKILYLLVFVFIASGAFLLVNHKLKIFKYDFEATTVNGEVSMK
                     SFDGKYKILYFGYVFCPDVCPTTLTLVSTALNELKINDSVEILFVTLDLKRDDIKSCD
                     EFAKYFYPNSVCLRFSDSELDRVTKNYGAKYQIVDLNDSVMEYSVAHSSSIYLFDKKG
                     RFIKEVSNLTYENVKSQIQNLVKNH"
     gene            13999..15144
                     /locus_tag="RPW04_001059"
     CDS             13999..15144
                     /locus_tag="RPW04_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDX6295153.1"
                     /translation="MFKSLYFRMRIIHIAGILVLAINAFFFTENQIGQIVQYIIVAAL
                     VFHDIDEKRWGVDMTKEIIKKLNNITLNSDIKVNTSFSKENGKILSSIDEFKENIKII
                     VAAISENTIKNSQNIKGLENIGNSLYISNNNMKNIVDITYSKTNSINTLLDNFIKDIL
                     QAKADQKSMFSTSQEIKNLLEDVQNLVKKIFNQNSELADHFNSLKNNINSIMKIVQTV
                     SNVADQTNLLALNAAIEAARAGEHGKGFAVVADEIRKLSESTQNSLEEINNNIKEITK
                     GVDNSKNSLSSTMENVDYLLSKSTDTNEKLNNFESIFNNNYKTTQKIIEHSSQTKSNL
                     KDITAEVGNIGILADNSLVNSKDINEISKDIKNSFDELQRAVDSFFK"
     gene            complement(15274..>15578)
                     /locus_tag="RPW04_001060"
     CDS             complement(15274..>15578)
                     /locus_tag="RPW04_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003246265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDX6295154.1"
                     /translation="ETTLNLIGNKWKFLVIRDLMGGKKRFGELKKSISATKNQSISQN
                     VLTQNLRELEDAKIISRKVYAEVPPRVEYALTPLGHSLENILIALENWGESYKNGF"
BASE COUNT         4878 a         2935 c         2140 g         5625 t
ORIGIN      
        1 aactgagcga ctcttatatc atcagatatt ttttgagttg gttttttaaa ttgagtagtt
       61 aaaatcgcat taatatcata aattctttta tatagctctt ttgtatttaa ttcaaaagtt
      121 ttaatctctt tttcatccat atccctattt aaactcaaaa caaaactatc atcatcgcta
      181 ctaaatttaa gtacctttag aggttttttt acctcatctt cgttctcttt tgagctgctt
      241 ttttgaactt cattctctac tttttgctct ttagattcta tttttttagc agaagtttca
      301 actttcggga taatattttt atttatagtc tgcttttcag gtttttttac taattcttta
      361 gtttgatcgt agcttataat atcctgattt tcataatttt taagttcgct ttcataaact
      421 ttataatcca acccaagctt ttttgagcca tctaccaatc ttaaaagagt ttgtattttt
      481 aagtctttat tgtcgtttaa tatagaatgt acataaacgc cttttaaatc atgataaata
      541 cggagctgtt cttgttttgc cgagctataa aatttcgtat caaactcgcc aaaccaagac
      601 gaaaaatcag ctccgaatgc aaacgcactt aggataaata gtaaaagaac tctaactatt
      661 ttccccatat accaactttt ttatcagatc tttcacacta attatctcat ttagtctata
      721 tccgtttgcg ccggtaaaaa atagtccggt ctcttttttt cctgaataag catcataaag
      781 tctgtctgct atacaataac cgacttcttt agcttcttta ccacgacaac aaggactcac
      841 acagttgctt atacactgaa ttttaggtcc gcttcttttt tctactaact ctattaaatt
      901 tgttctaact ccacgagcag gatatccaac cggacttttt ataagtttta tatcttcttt
      961 tttagcattt agcaaaacac ttttaaaatt atcgctagcg tcgcattcaa aagttccgat
     1021 aaatctagtt cccatctgta cgccacttgc tcccaaactt atggcttttg ctatatcgcc
     1081 atgatcccaa attccaccag cagccataac aggaatcggt tttccgccga tcttttccca
     1141 ctcactagct tctttaacga caggttctat aagcttttct aattgaaact ccggatcaat
     1201 acactgttca taggtaaatc cttgatgtcc gccgctaaga ggtccttcta acacaactgc
     1261 atcaggaagt ttttcatatc ttagatgcca tcttttacat attattttaa gtgcttttgc
     1321 ggagcttact atagggacta aagcaacgtc tttgaagcct tttgtaagtt ccggtaaatt
     1381 tgtaggaagt ccggcacctg aaattatgat atttatccca tgttcacaag cgtcttttac
     1441 tatcctagca taatcattac tagcacacat tatatttgca gctaaaggtc tatcgccgca
     1501 tatttttcta gcattgtcta tgatggcttt aaatccatct cttgagtaga aattttcact
     1561 atcataaggt ttattattta tctctttagc aatatgactt ctatgttcat aataaccggt
     1621 tccaactgaa cttataactc ctaatccacc atttaaacta acattaccag caagcttgtc
     1681 ccaactgata ccaagcccca ttccaccttg aataatagga tattttatct catatttgcc
     1741 tatttttaag ctttttagtt ccattatttt acctttaatt ttgcgtacgt ttttttaccg
     1801 acttgcaaaa tatactcacc cttagcaagt ttaagctgct catctataac cttttgctga
     1861 tttacactca ctgcgtttgc ttttatatga cgacgcgctt cagcgttact agaacacaat
     1921 gcacaattgc taagcgcttc tactatccaa atttcgtctt taactatctc aaactcaggc
     1981 atatcgcttg gaagttcttt tttagaatga actctgtcga actcatcttt tgcagccccg
     2041 gcttcactta ttccgtgaaa acgacttgta atttctaaag ctaaattctc tttcactttt
     2101 tttggatgca attttgcact gctaacatct gcttttaaat ttaaaatatc atcagaactt
     2161 ttatcgctta aaagctcata ccatacccac ataagatcgt cacttatgct aagagtttta
     2221 gcaaaaatat catttgcact ctctgttacg cctatgtaat tgccaaggct tttactcatt
     2281 ttatttacac cgtctaagcc tacaagcaga ggcatcataa taatagcttg ttctttacct
     2341 atgccgtacg ttcgtccaag agtgcgaccc attaaaagat taaatttctg atctgttcca
     2401 cccatttcta tatcacattt catagctaca ctatcataac cttgcaaaag aggatataaa
     2461 aactcgctta tagctatagg agtttcgttt ttatagcgtt ttgtaaagtc gtctcgctct
     2521 agcattctag ctacgttaaa cgtacttgca agagcgataa gtccatctgc tcctagcttg
     2581 cttaaccaag ccgagttaaa cataacttca gttttactct catctaaaat tttaaaaacc
     2641 tgttctttat atgtttttgc atttttagct atagtatcat cgtccaacac ttttctagtt
     2701 gcgcttttgc cgcttggatc tcctatttta gcagtaaaat cacctatcaa aaattgaact
     2761 ataccgccat gtttttgaag cagtctcatt ttatttaaaa ctacggtatg ccctaagtga
     2821 agatcaggag cggttgggtc aaaacctgct tttatataga aatttttacc attttcgtaa
     2881 taatttttaa taaggctttt aatacgagag aaatctatta tctcagcaac accttttttt
     2941 atctcttgca ttatactatc tatattattc atattactct ccttgattat ggtaagcatc
     3001 agatagggat ttaaactcag ctatcttata cctctctttt aacttatctc ttatcatatt
     3061 gctgtctaaa ttctcattta attctatagt tacgtcaaaa taatcagcag caataaggtc
     3121 atcgctttcg cttaaagtaa tggttactag atccacattt aatttagcca aatatgttaa
     3181 aaaagcagct aaactaccgc gcttattctc tatacttaaa ataattttat atctatgcgg
     3241 tgcgtttctg gtccatttga caaatatcat ctcttcttta tcgctcataa gtttagcagc
     3301 tctttcgcaa agcttatgat gaactactac gttgtgacca tttttaaagc ctattatatc
     3361 atcgccgcgt tttggattgc agcagtagtc aaactctaca ccttttatag tatgatttga
     3421 atagacaacg atattatcaa atttctgttt ttttacctca tatttatcgg caaatttaag
     3481 actaaataat ttatcttgtt taggatattt tttaagtgca tttacaacgt cttgaagata
     3541 aactgaatca ctggcggctc ttgcgatttt tttatttaaa ttttcactct ctagccagtc
     3601 taatatcttt ctttctccaa cattaaatat accgactaat atatccatag ctacttgctg
     3661 atttacttct cttatctttt gtctgcaaaa acttcttata gttgctcttg cttttcctgt
     3721 tttgacattt gataaccaag aacagcggta atgagcttca tttcccgtta ctatgcggat
     3781 tatatcaccg tttttgagct ctgttaagag tggtactcgt attctattga catatgcttc
     3841 tttagcgtga agtcctactt cagagtgtat ctcataagca taatcaagag cagtagctcc
     3901 acgtggaaga gtaaaaattc ctccttttgg agaataaacg gctatatctt ctacatataa
     3961 actatctttt gcatactcat atagatcttc tatgctttta tcatcgcctt cttgggcact
     4021 tatatcgctt agccaatcga gttttggagc tattaaccct ccatttttat acttccagtg
     4081 agccgctaca ccgtactctg cagttttatg catatcaaat gttctgattt gagcttcgat
     4141 aatactttta ttatcaaaaa tagtcgtatg aatagtctga taaccgtttt gttttggtaa
     4201 agcaacgtaa tctttaaatc ttgaaataag aggattaaag ttcatatgaa ggacacctaa
     4261 agccaagtaa caatcttttg gatttttaac tattattctt attgcaagta gatccaaaac
     4321 ctcttccata ctgatgcctt ttctttgcat ctttagatag atagagtagt aatgctttat
     4381 tcttttttga acttcaaaac tatcttctgt aaaaccgcta gtaagaagtt tttcgcctac
     4441 tttttgacta aatgagttga tttttaactg aagctgctgt ttgtgttcat ttatatatga
     4501 gtctattacg caatactctt ttggtaaaac gtacttaaaa ctaagatctt ctaagatatt
     4561 ttttaccgcc gaaattccaa gtctatgtgc tataggagca taaacaacta gagtttcttc
     4621 tgctatgcgt ttttgtttat ctggcctaag ggcttctaat gttagcatat tatgcaatct
     4681 atcacaaagt tttattacaa gtactctaac atcttctata gatactaaaa gcatttttct
     4741 aaaagttagc gctgaggctg ctaatttttc atttgaatta gaactagcca actcattttc
     4801 tcttatagcg actatcttag taagtcctct tactaaattt gtaacctctt cgccaaattc
     4861 aaatctaact tcatcttcgc tacactcggt atcttcaaca acatcatgca ataaagaagc
     4921 tataagcata ctctcatcgc cacccatatg agctacgaaa gagcatacca atataggatg
     4981 tatggcatat ggttctccac tttttctaaa ctgaccctca tgaagcctaa cacagtaatc
     5041 aactgctttt aaaagcattc ctgtgggctt tgcaacggag tataaaacat cttttgccga
     5101 ttcaatattt ttactgacaa caacctcttc tataagctgt tctagtatct gtccattatc
     5161 tatttgattc aacgaatgcc tctaacaaaa ccttgccctc tgatatctca agaagagcaa
     5221 tatccgtaaa tttcattttt gcagcgttta tctttacaag cggcgctgct ccctctgcta
     5281 gcatttcagc tctttttgct actagtagag ccaatttata tctatcattg cctactactt
     5341 gaagcgcttt tgctgctatc tcttctgttc tttgcattat ctctccttgc taatttttaa
     5401 ctactgagca gtttgtataa tctccatttg ctatcttaag caaattaccc tcttcaaaca
     5461 tattacaaac tacgatagga agcttattat cttttgctaa agctattgcc gtatcgtcca
     5521 taacttttat attatcttcc atagctcttt cataagatat ctcgtttaat aaaacagcgt
     5581 cttcaaattt catagggtct ctgtcataaa ccccattaac ctttgtagct tttataatca
     5641 tattcgcatc tatctcaatg gctctcaaag tagccgcagt atcggtggta aaaaatggat
     5701 ttccggttcc agcagcaaat ataacaacgc gacccttttc aagatgacgt tgcgctctac
     5761 ccatgataaa cgtctcacaa atagcttcca tttttatggc gctttgaact ctaacactaa
     5821 gtccgctata ctccaaagcc tctctcatag caattgcatt aattacggtt gcaagcattc
     5881 ccatatgatc gccgcttgtt cttttgataa tgccgtcttt tgccgcactt acacccctga
     5941 taatatttcc accgcctata actatcccga tttctatgcc atttaaaact aagcctttta
     6001 tctcgcctgc tatgtatttt aatatgtgag tatctattcc aaaaccgttt ccgccagcca
     6061 aagcctcacc tgaaaattta accaaaactc gctttttgtc actcattact gtctcctaaa
     6121 atttgggaat tatacctaaa aactccttaa tatttattaa ctcatttaag actaataaga
     6181 tcaagaggat tgatatgata gtttttttga gtaacttcaa atgtcaaatc ctgcttaact
     6241 cttcctataa cataaccttt ttttatttta cttcctactt ttatagtagg agctatctta
     6301 tctaaatgag cataaatagt atgaataccg tctgaatttt ccacaataac tactttatca
     6361 agtatcggcg tatctttagc aaataccaca gttccagcaa gtacactttt tacttttgca
     6421 tctggttcgt tagagcgaag cacgatagat tcattaaaaa tcttaatatt gtaaatagga
     6481 tcaacgtagt ctccgaattt ctgctttacg ctaaaattat caagaggagc tatagttttt
     6541 tcgcctacgt attttttaac attacttgtt ttataactag atcctatttg ttttatatct
     6601 cccgtgttcg cattagccgg agtatttggc ttggtttgtt tagtctcttt tttttcatct
     6661 tcttttttag ctagaatttg gagcttctca agagtttttc tgagctcatc ttgttgatct
     6721 tgcagttttg ctaacttttt tgaataaata tctttatctt gctttaaatt tgataaattg
     6781 ctcttttgtt tgttttgaag gctttttaat tttgcttgtt tttgtttaaa ctctcttaag
     6841 tcaaatttaa ttgagtttat cttatcagac tgagatttta taagatttac ggtctgctca
     6901 tagttttttg ctatcttttt aaattcatct tgcataacca aatttaattt agataaaact
     6961 tcatttgcta taatactctc ttcgctctct tcataatcgt ttggaattat aagatcatac
     7021 gcaaaatcct cactaataat tctaatcaat cttttttcca tatctttttg attctttatc
     7081 aaatcactat tttgactagt aagcttgttt aactctgcat tagcatcatt tgcgctactt
     7141 tccaactctt ttacttgctt agccaactcc tctatctgaa tagcggtatt tttcacatcg
     7201 gcttcgcctt ttattatatc gctaactaat tcttcaagtt ttttatttaa ttgggtttct
     7261 aacttcttag cagaacttaa agtctctttt ttgtcttgta tcttgtcagc aacactagca
     7321 ccgaacaaaa cgacataaaa taataatagt agtgaaataa atctcattta ggctctctag
     7381 actgaagcat cactagacta actgctatta tagataccac tatagaagca ctaaaaagca
     7441 gcaccgtatc gctaaacaag tctaaatttg gaagttcaaa acctatgcta aaaacagcat
     7501 tttgaaatat atcaagagcc ggaataaaag cataaaacag agttactaaa ctagtcgcta
     7561 taatgctatc aattattgct aatttatata gcatggcaga ttttagccag tatggagccc
     7621 caaaaagagt catgatctcg actcttcttt tatgctcata cagccaaatt ttcatctgtt
     7681 taaatattaa agcaactccc ataagagcta taagtacggc aaaatattca aaaatagatt
     7741 ttgataaaac aagcatttta tatactttat catatgtttt agaaaaagtt tctacctttt
     7801 ttataccatt tatttttagc aatctacttt gaatctttga catatactca gagcttggaa
     7861 aactatttaa ttttaaagag taaaactttg gaagagagtt acttaatact gataaatttc
     7921 ttgttgaaac atcattttta agccgatcta aaacagattt cgtatcaagg ggtattaaat
     7981 ctttaaaggt ttcaatattt tgcttgatcg tatcactgct aatctcattt tcagaaacga
     8041 taataatatt ataatcattt cccatagtag tttcgtaatt acttactatc ttatcgacca
     8101 taaaactaaa ctcgatagaa aaaagcagta taacaagcgg aaaaataaca cctaaatggc
     8161 ttttaaatga tttcatttat ctctccattt aatagttcaa aatgtctata ctcggttctc
     8221 aagctagatg gaattttatg agttacaaca acaacgcaag ttccaagacc atctctagca
     8281 gactttaaaa gcgaccatat cacatcactt gaatactcat ccaaactacc tgtaggctca
     8341 tcacataaca gaagctgagg attatgcgct aaagcccttg ccatagctac tctttgttgc
     8401 tctccgccac ttagttcaag tggaaattta tctgctttat gaagtaaatt tacatgattt
     8461 agcagctttg cggcctgttt tttacataca ctttggttat aacctttaat tataagagga
     8521 agcattacat ttttttcaac attccactcg tttataagtc taaaatcttg aaaaattatt
     8581 cctactcttt gtctaagaag cgccaagctt gatctgttta tatctttaag ctcgcttaaa
     8641 catactatta gactgcctct atttacagat atatctccgt acatagattt tattagcgta
     8701 gattttccac tgccgctttt gcctgttata aatacaaaat cattcacgtt tatgttaaaa
     8761 tttgctccat ttataacatt ttgatctctt tcatatccga tatttagatc cttagcttct
     8821 acgatgtgct gcaacttaaa tactccttta gagtgctgtg tgcttttaaa ttttcataag
     8881 taagaagtgg ttttttaata aaatatgagg cttttgaatt ctccactagt ataaaacagt
     8941 gctcaggtct ataaaacgag ccaaatgcga cccttaaaag cagtccgccg tttttttcgc
     9001 tgctatcttt tttataaata cgctccatat gaataaaata gtcatctttt tttatagttt
     9061 tattctcgaa tttagacaaa atatcttctt ctaaaacagt cccaaactca aaatctccat
     9121 gcaaaacttt ctgctcacta acaattaaat ttgtaaaaac aacatcataa atatctctat
     9181 tttgttttat ccatctatct tcatatttgc ttgaaacatc taaaaaacga tttttataga
     9241 tctccatttt agcttctttt aaatttaaaa aacaagatat cgtaaaatcg gtgtaatttt
     9301 tatcatcact cctaagctca aatgagccgc ctgattttaa aactctttga cactcatttg
     9361 caaactcagc actcactacg cgtctttttt ctgacttttc ccaaggcact ggaaagtgta
     9421 gaaacaatct atctacgcta tttgaatgga gcaaagacat aaccaatcta gcatctaaat
     9481 tcaaaagaat aacatttttt aatcccatac tcaaagctag attatttacc tgctcgcaag
     9541 agcgtttata aacttctata ccaactacta aagtattttc atctgttttt gcctgatata
     9601 atagatgtct tccgctgcca aatccaatct ctacaaaaat ctttttaaac tcaccgctct
     9661 ttagcttttc taaaaactga atgtcgttta atataaactc tttttttgca agttgttttt
     9721 catttttaat agctatggtc gatgatttta gatctaaaac attaagatct ttatatacac
     9781 taagagcttt ttggatagtg cccagactag caggacgagt tagcttatct gatttaacta
     9841 cgaattcggt tttcttatcc tttacaagta aaaaaaactc ctttttacct gtttttgtat
     9901 agataagact ttcatcacct gcttttgcac tccataagaa ctcaacgcca tctgccccaa
     9961 acggaaattt gagatttttt agactggttg ctacgaaatt tggcattact tggctactac
    10021 aatagcttgt ttggactcat ttgagtttat gccgtactcg tcaattccta caattttata
    10081 agtatattca agcccaaatt gtatttggtc atcattataa ctattaccaa ctatatcttc
    10141 tatggcttct tcacctgcag cacttgattt tagtattttg tattttacgc ttctgttatc
    10201 gcttcctgag ctccatgaaa gttctatact tataccatta aagctagctc ctgttataat
    10261 aggagattta ggagatgtta gagtattccc cactaccgga ttgttttgtt ttggactttc
    10321 taatccgtct ttatctaccg cagttacttt ataatacatc tgagcgccgt tttcgtttat
    10381 aagatcatca tactgaacag atgtcgtttc tgtaagtttc aaaagtggaa atatctcatt
    10441 tgacgaacga tatatattat aatgagaaaa atcgtcattc gtgtttggct cccatgtcaa
    10501 agttatcttt ttaggaagat ttgttgtcgc ttgcaaattc aaaaccaaat ttggaagagc
    10561 tttcgtttga gcagatataa tagcacttgg tccagaagta atgccgtcaa ctgttttaac
    10621 aagtattcta tatctataat gatgatttgg atcaagacca tcatctatat actctacgtt
    10681 taatctacct tttacctcag ctatacgata ccacttatcg cttgaaatat tatttctttc
    10741 aattatatat gaagcaactc taggatctgg atgcggtctc cataaaattt taattctatt
    10801 tggcaatcca taaacggctt gggcaaaaga taccgattca attagtttgc ttgtagaaac
    10861 agttataatc tctccgttgt ttgatatatc accattatta tcatagcttc ttagctcata
    10921 gctgtactcc gtagatggag ctaagtttgt atctacgtaa tgagttgcga atctatcttt
    10981 gatatttgct actacgctca tttttccatc ttcattagga tttgagcgat aaagatagta
    11041 tccggcgata ttttcatcat ttacaggatt ccactcaaac gctatttgag tcatatcgct
    11101 gattgttttt aggctattta tggtcgggag atttggattt acctgagata ctttataggc
    11161 acatccactc attaaagcca taaaaagcag agctaataaa ctcgggatca attttttcat
    11221 ttaaaatctc cttgtcaatt tttttactta aaatatcata aaaatcagtt ggtaaaggtg
    11281 ctataaactg catcttttca ccgcttttag ggtgtgttaa atttaatata taagcatgca
    11341 gcataactct ttttatttta caatttttgc tcttaaaacc atataaatta tcacctaaaa
    11401 tgtggcgatt tatactggct aaatgcactc ttatctgatg agttctaccc gtgaataact
    11461 tcgctgctat taaatttaga tcgtcttcgc aaataatatt cgtaaaagcg gattttgcag
    11521 ctctaccgtt tgccgcaaca ctatttttca atctattttg cggatttctg cctattggcc
    11581 tatcaataat taatttatct ttaagattga aatctatcaa agctaaatat actctgccca
    11641 tactcttatc acttaattga gcggctaatg cggagtgaga agcgttattt ttagctacta
    11701 ctataactcc actagttcct ttatctagcc tatgaacgat accggctctt atgtctccat
    11761 taagagtaga gagcatataa ccgttttgtt ttagccactc taccaatgtt gcttctttaa
    11821 cgctaggtgc cggatggact gtaagatttg aaggtttatt taacactaaa atatcatcat
    11881 cttcgtataa aatttccaca tcaaaatcag ctttaaactc gcagttttca aatttagcct
    11941 taggcaaatt aaaaccgatt ttgtcgttta aaagaacttt aaatgacggt tttagcatta
    12001 aattatcatt cacatataca tttccagatt ttataagctc actaatttga tttcttgaaa
    12061 tgctcagata tgaagcgaga atttgatcta gcctagcact gttgctagat ataaattcat
    12121 tcaatcttaa tccttttttt agtataattt taccaaaaaa ttcttaggtt taaatttgat
    12181 acgattagac aagcgtattt taacgcattt tgattttgtt cagcctattt tagtgcttcc
    12241 tattattatt ttatcttata ctctaatctc tgaagcaaat gacatgttat ctagcaaaca
    12301 aatagtatat tttagcatag gttttttagc ttttacattc ttttttttga tgcctattag
    12361 aaagatagag tggcttatac ctaccgtata ttggataaat atcattttac ttttcagtgt
    12421 tgatattttt ggtgtaagta aacttggtgc gcaaagatgg ctagaaattc catttgtaca
    12481 ttttactctt caacctagtg aaattatgaa gccatctttt attcttatgt tagcatatct
    12541 tataaaaaga gatcctcctg gtataaacgg atataatcta aaacagtttt taaaaatcag
    12601 catttatata ttactaccat ttggacttat actaaaagag cctgatcttg gtacggcaat
    12661 gatgctgatc atcacaggat atggtatttt atttataata ggagtaaata aaaaaatttg
    12721 gctaacactc gctatttgca tcggtgtagc agctccagta atttatgaaa gcttgcacga
    12781 ctatcaaaaa aagcgaatag tagatttttt gagtaaagag ccaagctatc aagtaaggca
    12841 atctattata gcaataggaa acggcggaat cactggaaaa tcggctgaag aagctactca
    12901 aactagattt aaatttctac ctatagcaac aagtgatttt atatttgcct atactataga
    12961 aagacacggt tttataggag gcatggtgct tatcttgctt tatggatttt tgatagctca
    13021 tttattaagt cttaattata aactaaaagg aaattacttt ataaaggccg tcacaagcgg
    13081 aatttccatt ttaatattta tatatgtaag tgtcaatata tttatgacta taggttttgc
    13141 gcctgtcgta ggaatacctc tgccatttta tagttatggc ggaagtagtt ttgtaacgtt
    13201 tatgtgctta tttgggatat tgcaaaacct gcttacattt agatttgatc ctacttatag
    13261 atttataaag atcaaatttt aatgattttt aactaagttt tgaatttgac ttttcacatt
    13321 ttcgtatgtt aagtttgaaa cttcttttat aaacctacct tttttatcaa ataaatatat
    13381 agacgaacta tgcgccacag aatactccat cacagagtca tttaaatcta ctatttgata
    13441 tttggctcca taatttttag ttactctatc tagctcacta tcgctaaatc tcaaacaaac
    13501 agaattcgga taaaagtact tagcaaactc atcacaactt ttgatatcat ctctttttag
    13561 atcaagagta acaaacaaga tctctacaga gtcatttatc ttaagctcat ttagagctgt
    13621 tgaaaccaaa gtgagtgtcg tagggcaaac atccggacaa aatacatagc caaaatacaa
    13681 tatcttgtat ttaccatcaa aactcttcat gctaacttca ccatttacgg tagtcgcttc
    13741 aaaatcatat ttaaatattt ttaacttatg atttactagc aaaaatgcgc cagaagcgat
    13801 aaacacaaag actaacagat atagtatctt tttcattcat atccctttga gtttaatata
    13861 aacataactt tgcattgtat cacagtaaag attagaataa aattatataa aacttattta
    13921 aatttagaca ttgataaata tcaatataag atttaataca aaatgatata agtttaaaaa
    13981 ataataagga gtatcattat gtttaaatca ctctatttta gaatgagaat aatacatata
    14041 gcaggaatct tagttttagc gataaatgct tttttcttta ccgaaaatca aatcggtcaa
    14101 atagtacaat acataatagt tgcggcactg gtatttcacg atatcgatga aaaaagatgg
    14161 ggagtagata tgaccaaaga gataataaaa aagttgaaca atataacatt aaactcagat
    14221 attaaagtaa atacgtcttt tagcaaggaa aatggaaaaa tcctttcgag catagatgaa
    14281 tttaaagaaa atattaaaat tatcgtagcg gcaatttctg aaaataccat taaaaatagt
    14341 caaaacatca aaggattaga aaatatagga aattcgctat atatttccaa caataatatg
    14401 aaaaatatcg tagatataac atattcaaaa acaaactcta tcaacaccct actcgataat
    14461 tttatcaaag atatactcca agcaaaagcg gatcaaaaaa gcatgttcag cacatctcaa
    14521 gaaattaaaa atttattaga agacgtgcaa aacttagtaa agaaaatttt caatcaaaac
    14581 agcgaacttg cggatcattt caactcttta aaaaacaaca taaattcgat aatgaaaata
    14641 gtacaaaccg taagtaacgt agcagatcaa acaaacttac tagcattgaa tgcagctata
    14701 gaagcagcca gagccggaga acacggaaag ggatttgcag ttgttgcgga cgagataaga
    14761 aagctatctg aatcaacgca aaactcgtta gaagagataa ataataatat aaaagagatc
    14821 acaaaaggtg ttgataatag taaaaattcg ctatcatcga ctatggaaaa tgtagattat
    14881 ttgctatcaa aaagcacaga tacgaatgaa aaattaaaca actttgaatc tatttttaac
    14941 aacaactaca aaaccactca aaagattata gaacatagct cgcaaactaa atcaaattta
    15001 aaagacatta ctgcagaagt aggcaacatc ggaattctag cggataatag ccttgtaaat
    15061 tcaaaagata taaatgaaat ttcaaaagat ataaaaaaca gttttgatga gctacaaaga
    15121 gccgtagata gcttttttaa ataaatactt aattgatata tttgagctta gactcgaata
    15181 tatcaaaaaa caatttgata aagataaaaa atagctattt tttataaaaa taaatttgaa
    15241 aatatcttaa aaattcaaat ctatcaaata aatttaaaat ccgtttttat aactctcgcc
    15301 ccaattttct aaagcgatta aaatattttc taaactatgg ccaagcggag taagtgcgta
    15361 ttctacacgc ggaggcactt cggcataaac cttcctgctg atgatttttg catcttctaa
    15421 ctcacgtaaa ttttgagtta atacgttttg actaatgctt tgatttttag ttgcacttat
    15481 acttttttta agttcgccaa agcgtttttt accgcccatt aagtctctaa taactagaaa
    15541 tttccattta ttgccgataa gatttaaagt agtctcca
//
LOCUS       DAPPKW010000038        15553 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.038, whole genome shotgun sequence.
ACCESSION   DAPPKW010000038 DAPPKW010000000
VERSION     DAPPKW010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15553
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.038"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            137..1537
                     /gene="murJ"
                     /locus_tag="RPW04_001061"
     CDS             137..1537
                     /gene="murJ"
                     /locus_tag="RPW04_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008339727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HDX6295155.1"
                     /translation="MLKYFFTNSFGILVSRVLGLIRDLMTANALGASVWSDIFFVAFK
                     LPNLFRRLFGEGAFTQAFLPNFVKVSNKGLFLAEILLKFSSTMLVLTLGVMIFAPFVT
                     KILAYGFDENSINLAVPLVRINFWYLICIFIVTLFASVLQYKNHFSTTAFSTALLNLS
                     MITALLLANNLPQSDIVYYLSWGVVAGGILQVITHIIALKKLNLIKLLNLGIFKFIKG
                     KRASSKGFWANFSQGVVGSSANQLSDFISTFIASFLMAGSISYLYYANRIFQLPLALF
                     AIALSTAIFPKISKQIKANSTKNAHDLLAKSFHILFFLLIFSTIGGIVLAREIIWLLF
                     QRGEFNANNTIEAAKVLQMYMLGLIPFGLYKLFSLWLYANMKQKIAAKISIYSLILNV
                     ILSLILFKPLGAMGLALAGSASGLFLLVYVIFIFGFKNFLDIILSKKTLITIFSGIVF
                     TFFIIYFKEFIYDYLR"
     gene            1521..2900
                     /locus_tag="RPW04_001062"
     CDS             1521..2900
                     /locus_tag="RPW04_001062"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011992254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDX6295156.1"
                     /translation="MIIYDSILKQKVEFKPIREDEANIYVCGPTVYDDAHLGHAKSSI
                     SFDLLRRTLKSLGYKVKFIKNFTDIDDKILKKMSQTGKSLEDITNHYISRYKADMYAL
                     NVADADIEPKATTSLTSIINYITTLFENGWAYKIDDGIYFDTSKDDKYLSLSGRKDEN
                     LIARVASKDEKKDEKDFVLWKFDENWYDSPFGRGRPGWHSECVAMIKDHFCGSYEFEI
                     DIHAGGADLLFPHHENEAAQCRCAYNKNLAKYWMHNGFVQVNNEKMSKSLGNSFFIKD
                     ALELVPGEALRFYLMSSHYRANFNYDIDDLKSSKKRLDKIYRLKKRLIGVKTSKTDAK
                     FKKDILDAMSDDLNISVALAILDEMVNNANAKLDNEPKNRDFKQILVSNLEFVKELLG
                     ILYIDEFKWFQWGVDDSLKQEISVLIDQRNMAKKDKNFILADQIRDKLTNMDISIMDT
                     PNGTMWEKV"
     gene            2897..4615
                     /locus_tag="RPW04_001063"
     CDS             2897..4615
                     /locus_tag="RPW04_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6295157.1"
                     /translation="MNGVKDVFKRFIPYFKDYIPQFALAIIGMIMASVGTAVSAYLVK
                     PVLDKIFVEKNESLLYLLPYAIIAIYFLKSLGTYLQAYFTAYIGQDMVKRFRQKLLDN
                     LLILDMSFFNKFRTGELISRNTSDIERIRSIVSSMIPELTREFITIIGLLVVVIYQSP
                     TLAVFALVIFPIAIYPLSRLAKKMKKISRKSQEKTSDISSVLSEIFSNIEIVKANNAE
                     NKELKRFDEHNEKFFRLNLKSVKVNELVSPMMETLGSIGVAVVIIIGGKQVIDGTITV
                     GSFFSFLTALFMLYTPIKRISSLYNKMQDAVAASERTFELLDRSASIIGGNLEFPKTV
                     NSITLQDIHFSYNDKKVLKGISLKVNKGQMIAIVGSSGGGKTSLINLLMRFYDANSGS
                     ILINENDICEFSLKSLRQNIGLVTQRVYIFNESVAANVAYSGEIDEKKVVCALKTANA
                     YNFVDKLDNGIYTILDEFGANLSGGQRQRIAIARALYKNPQILIFDEATSALDNESEK
                     EITNAIETLSKDKIIFVIAHRLSTVKNADKIAVLDNGKIVGFGDDKTLENECEVYKKL
                     KLGSLS"
     gene            4667..5725
                     /locus_tag="RPW04_001064"
     CDS             4667..5725
                     /locus_tag="RPW04_001064"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HDX6295158.1"
                     /translation="MDYRDIKKLFFKLDPETAHKIAECGLRTAANLPFAADYLVDKFC
                     YTDTKLSQNIFGLNFLNPVGLAGGFDKNATMLRALLALGFGYLEYGTLTPKPQPGNPK
                     PRLFRLIEEKSIQNAMGFNNDGVDKIKKRVEKLYPFAVPLFANIGKNKITPNEEAIKD
                     YELLVRELSGFCDAFVLNLSSPNTPNLRDLQEDKFITELFEIIKPLTNKPIILKISPD
                     IKEDKAIQICLNAANLGIDAIIVNNTSIDYSLSSNAKNFGGLSGALITQKSKEMFKNI
                     AKELFGKTILISCGGIDNAKEAYERIKMGASLVQIYTSFIFEGPSICKNINKELVNLL
                     TDDGFENISQAIGANLRK"
     gene            5726..6973
                     /locus_tag="RPW04_001065"
     CDS             5726..6973
                     /locus_tag="RPW04_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HDX6295159.1"
                     /translation="MLPKFSKITLNNGLEVYHTPLNLGSNVISIDLFYKVGSRNETMG
                     KSGIAHMLEHLNFKSTKNRKAGEFDEIVKGFGGVNNASTGFDYTHYFIKCSNQNLDTS
                     LELYSDIMENLNLKNEEFLPERDVVLEERRWRTDNDPIGFLYFRLFNNAFIYHPYHWT
                     PIGFFTDIQNWSIDDIKAFWQTYYQPKNAFLMITGDIDEQTAFDISKKHFEHIKNGKD
                     IPNFYFKEPEQNGKKEVVLRKQSDVEMVAIAYKISPFNHEDQVGLSAISDYLSSGKSS
                     LLQKKLIDELNLVNQIYAYPMDCVDDGLFIFIAICNPDVKAKQVQKELLNLIKQIKQD
                     LVEDEELIKIKNSLKSDFIYSLDSASKLANLYGSYIARGDITPLYDLQNKTESLTSSD
                     VQKIAKKYFVSKNSTTIILKGTK"
     gene            6970..7863
                     /locus_tag="RPW04_001066"
     CDS             6970..7863
                     /locus_tag="RPW04_001066"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012001835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDX6295160.1"
                     /translation="MKKAIFGAMTALITPFKNGKLDEAGYEKLIKRQIKNGIDAIVPV
                     GTTGESATLTHDEHRICIEIAVETCKNTKVKVLAGAGSNATHEAVDLAEFAEAHGADG
                     ILSVAPYYNKPTQEGLYLHYKNIANSVKIPVLLYNVPGRTGCDILPETVIRLFNDCEN
                     IYGVKEASGSIDRCVDLLAHEPKLYVLSGEDAINYPILSNGGKGVISVTSNLLPDQTA
                     ALTHYALDNEFLKAKEINDRLYNINKIMFCESNPIPIKAAMFIAGLIDTLEYRLPLCN
                     PSVDNLKKIEETMKSYDIKGF"
     gene            7863..8651
                     /locus_tag="RPW04_001067"
     CDS             7863..8651
                     /locus_tag="RPW04_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002947869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase"
                     /protein_id="HDX6295161.1"
                     /translation="MSCYNDEFKGKTLVISGGTRGIGRAIVLEFAKAGANIAFTYNSN
                     KEMAEKQACELEKEFNIKSRAYALNILEPETYKELFLQIDEDFDRVDFFISNAIISGR
                     AVAGGYTKFMKLKPRGINNIFTATVNAFVCGTQEAAKRMEKVGSGSVISLSSTGNLVY
                     IEHYSGHGTAKAAVEAMARYAATELGDKNIRVNVVSGGPIETDALRAFTNYEEVRDAT
                     AALSPLGRMGQPTDLAGACLFLCSSKASWVTGHTFIIDGGTTFK"
     gene            8648..9193
                     /gene="pgsA"
                     /locus_tag="RPW04_001068"
     CDS             8648..9193
                     /gene="pgsA"
                     /locus_tag="RPW04_001068"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDX6295162.1"
                     /translation="MSLNLPNSLALLRIILAPLLFFLLLQIETQSNFAYISWLNYFCA
                     LIFVIASITDFFDGYIARNWNQKTKLGAILDPLADKMLILAAFLGLMMVDRASPWAVY
                     LILVREFFITGFRVVMATENIDISASLAGKIKTIFQMIAIGFITMQWWGGAILLWVAV
                     ALTLYSGYEYIYAYTKHIKRI"
     gene            9322..10410
                     /locus_tag="RPW04_001069"
     CDS             9322..10410
                     /locus_tag="RPW04_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDX6295163.1"
                     /translation="MKKILSLMFAALIFIGCSSANSDKNDAPVLRIGTEGTYSPFTYH
                     DNSGKLVGYDVEVIEEAAKRAGFKPEFYETNWDAIFSGLNSNRFDMIANQISDNNPKR
                     AELYTLSNPYIVTSAAIAVRANNDTIKSLKDISFHVDTGDILAIIGPSGSGKTTLLRC
                     LNYLEMPNNGTLSFCDGSLNLDFSEHIDKKDILKLRRKMGMVFQSYNLFPHKTALENV
                     TEGLIVVQKIHRDEAEHIALEIIKKVGLSDKINLYPSSLSGGQQQRVAIARAVALNPD
                     ILLLDEPTSALDKELVGEVLNTLKLLAKEKQTMVLVTHELNFAKDVANKIMFLEGGEI
                     ITIENPKEFFENQKNPRILRFLGNLSAN"
     gene            10422..11294
                     /gene="rarD"
                     /locus_tag="RPW04_001070"
     CDS             10422..11294
                     /gene="rarD"
                     /locus_tag="RPW04_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDX6295164.1"
                     /translation="MSINDKKGLILGISTFAMWGVFPIFFKFIDSVGAIEILAHRIIW
                     SAIILFILLKFRNKIINVKRLLKIKKVALTLFITGILIASNWGIFIYAVNQNQILATS
                     LGYFINPLFSILLGAIILKEKLSTTLKISILIVFFAICIQIYALGSLPFISLILPLSF
                     ALYGLIRKKVSIPTFEGLFIETLLLVPIAIAYISYLGLNSNSKFGFELNGLLLFLSGF
                     VTIIPLLTFNASTKYLKLSTIGFLQYISPSLSLLIAIFVYNETLDSYKLISFILIWIS
                     LVIAGISGLWRKNG"
     gene            11287..11721
                     /locus_tag="RPW04_001071"
     CDS             11287..11721
                     /locus_tag="RPW04_001071"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295165.1"
                     /translation="MGEQDIILIAIVVMIIAAILNSQINKLTKKIEKDELNPNLSYYD
                     SFCNAIDEKISWLRELVTDGNINDSASKDTCLEMLSNFSKELVFLQTMNTNTKDKAVW
                     EEKLFNFLSKIDDFVISNLKDAENVSQKIKDDLKAEFDKLSS"
     gene            complement(11716..12780)
                     /locus_tag="RPW04_001072"
     CDS             complement(11716..12780)
                     /locus_tag="RPW04_001072"
                     /inference="COORDINATES: protein motif:HMM:NF013126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 protein"
                     /protein_id="HDX6295166.1"
                     /translation="MKKLIIFFASVYLLFGASNDEAELKKMIGQMIMIGFSHSSANDS
                     WTDQLVLDAGFGRIGGVMLLARNISTKDELIKLTKKLSSSKSKHKLLIAIDEEGGKVS
                     RFINKDGFKHFPSAYEVGSKMNLNKAGIIYKDMADQLKNLGINMNFAPVVDVYNPNSS
                     IIGQKNRAFSKNPDEVIAYSSEFIKSFDKANIKTVLKHFPGHGNAIKDTHKEKTVVDN
                     YDFDELKPYFELIKRGQASFIMVAHVYIPNLDDKNPAVLSKHIVSDILKNRFKFKGAV
                     MSDDLLMKGLGELSIEQKVVRAINAGVDIVLVSEYFLNNSNSIKIINDAILNAVNSGK
                     ISKERIKDAYTRILRSKEGL"
     gene            complement(12777..13667)
                     /locus_tag="RPW04_001073"
     CDS             complement(12777..13667)
                     /locus_tag="RPW04_001073"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDX6295167.1"
                     /translation="MKIAVIGAGKWGQALFFALKQKNYCVISSRTKRDLEDFVNLKDA
                     LECEYIVFSIATQSIKEFLNLNFIDKNQKILVASKGIETSSSKFIDEIFCEFTSSENL
                     AFLSGPSFASEVTQKLPCALVISSHNENLAKIWAGAFPNFIKTYISSDVIGSEICGAY
                     KNVIAIASGICDGLMLGNNARASLISRGLVEMSRFGKYFGAKNETFLGLSGAGDLFLT
                     ASSVLSRNYRVGLGLAKGMPIHEILKELGEVAEGVPTAYAITRIANEKSIYTPIAAEV
                     CAMLNGKNVKESLKDLLKRK"
     gene            complement(13679..15097)
                     /gene="gatB"
                     /locus_tag="RPW04_001074"
     CDS             complement(13679..15097)
                     /gene="gatB"
                     /locus_tag="RPW04_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HDX6295168.1"
                     /translation="MFETVIGLEVHCQLNTKTKIFCSCSTSFGDEPNTHVCPTCLALP
                     GALPVLNKEAVKKAISFGKAINATVNKKSVFDRKNYFYPDLPKAYQISQFTIPIVEKG
                     ELFIKVGGEIKRIGITRAHLEEDAGKNNHETNKSLVDLNRAGTPLLEIVSEPDLRNSD
                     EAVAYLKKLHSILRFLNISDANMQEGSFRCDVNVSIRPKGDEKLYTRVEIKNLNSFKF
                     IQKAIEYEVERQILSWEDGKYDEEVYQETRLFDTNKLVTKSMRSKEDSAEYRYFPDPD
                     LLPVIIPDKMMEEASVLPELPDEKKARYVKDLGIKESDAEVIISSYEMARYFEDLIEA
                     KNSPKLAVTWLCVELLGRLKNGVTIETSPVDSKKLSNLINRIEDGTISQKAAKDVLDY
                     VMEHDEDVSSVIEKLGLKQVSDDSAILAIIDSVLSANSDKVAEFKSGKDKLFGFFVGQ
                     VMKEGKGAFNPSKVNDLLKSKL"
     gene            complement(15155..>15553)
                     /locus_tag="RPW04_001075"
     CDS             complement(15155..>15553)
                     /locus_tag="RPW04_001075"
                     /inference="COORDINATES: protein motif:HMM:NF014622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDX6295169.1"
                     /translation="IFMSLKPNFKAKFIIHNDLNLALNLKADGIHFSSNLIANLKNTP
                     QSLIKFASTHNEKEIEDAIKLGADFITFSPIFSTPNKGEPVGIETLKKIVLNSSVKVF
                     GLGGITTKKHIKMVELAKAAGFASIRYFAN"
BASE COUNT         5419 a         2447 c         2693 g         4994 t
ORIGIN      
        1 agtaaaaatt tatgattttt tataaatttg actttaaatt agagtaaatt taaataccga
       61 atttagcaaa ccaaagatat aataagcaaa attttcattt attattcaca ataacaatat
      121 ttttctggcg gagtctatgc taaaatactt ttttacaaat agctttggaa ttttggtttc
      181 tcgtgttctt gggcttataa gagatctaat gactgcaaat gcacttggag caagtgtctg
      241 gagcgatata ttttttgtcg cttttaaact tccgaatcta tttagacgac tttttggaga
      301 aggagctttt actcaagcat ttttgcctaa tttcgtaaaa gtatctaata aaggtctatt
      361 tttagcagag attcttttaa aatttagctc aactatgctt gttcttacgc taggagttat
      421 gatttttgca ccgtttgtaa caaaaatttt agcttacggg tttgatgaaa atagtataaa
      481 tttagctgtt cctcttgtaa gaattaactt ttggtatctg atttgtatat ttatagttac
      541 gttatttgca tctgttttac agtataaaaa ccactttagc actacagctt ttagtactgc
      601 acttctaaat ttatcgatga taactgctct gcttctagca aataatttac ctcaaagcga
      661 catagtatat tatctcagtt ggggagttgt ggcgggaggt attttgcaag tgataactca
      721 tattatagct ttaaaaaaac tgaatttgat aaaattatta aatcttggaa tatttaaatt
      781 cataaaagga aaaagagctt ccagcaaagg attttgggca aatttttctc aaggagtagt
      841 aggcagcagc gcaaaccaac taagcgattt tataagcacg tttatagcta gcttcttaat
      901 ggctgggagc atcagttatc tttactatgc aaaccgaatt tttcagcttc ctcttgcgct
      961 ttttgcaatt gcattatcaa ctgcgatatt tccaaaaatt tcaaaacaga tcaaagcaaa
     1021 tagcactaaa aatgctcatg acttattagc aaaaagcttt catatactat ttttcttact
     1081 tatattttct actattggcg gaatagtttt agctagagaa attatctggc tactttttca
     1141 aagaggcgag ttcaatgcaa acaatacgat agaagccgca aaagtcctac aaatgtatat
     1201 gttagggctt ataccttttg ggctttataa actattttca ctctggttat atgcgaacat
     1261 gaaacaaaaa atagccgcaa aaatttcaat ttattcgctt attttaaacg taatattaag
     1321 cttaatttta tttaaaccgc ttggcgcaat gggattagcg cttgccgggt ctgcttctgg
     1381 attattcttg ctagtttatg ttattttcat ttttggattt aaaaactttt tagatataat
     1441 ccttagtaaa aaaactctta taactatttt tagcggtata gtttttactt tttttatcat
     1501 atattttaag gaatttattt atgattattt acgatagcat tttaaaacaa aaggttgaat
     1561 ttaaaccgat tagagaagat gaagcaaata tatatgtctg cgggcctacg gtatatgatg
     1621 acgctcactt aggtcacgca aaaagcagca taagctttga tctacttcgc cgcaccttaa
     1681 aatctcttgg atataaagtt aaatttataa aaaatttcac ggatatagat gataaaatac
     1741 taaaaaaaat gagccaaacc ggtaaaagtt tagaggatat aacaaatcat tatataagca
     1801 gatacaaagc cgatatgtac gctctaaacg tcgcagatgc ggatatagag ccaaaagcta
     1861 ctacaagttt aacttctatt ataaattata taacaacttt atttgaaaat ggctgggcgt
     1921 ataaaataga tgacggcatc tactttgata ctagtaaaga cgataaatac cttagcttaa
     1981 gcggtagaaa agacgaaaat ttaatagcaa gagtagcctc aaaagatgaa aaaaaagatg
     2041 aaaaggattt tgtattatgg aaatttgatg aaaattggta tgatagtcca tttggacgtg
     2101 gaagaccggg ctggcacagc gaatgtgtag cgatgataaa agaccatttt tgtggaagct
     2161 atgagtttga aatagatatc cacgccggag gtgcagatct actttttccg catcatgaaa
     2221 acgaggccgc tcagtgcaga tgcgcttata ataaaaatct cgctaaatac tggatgcata
     2281 acggttttgt gcaagtaaat aatgaaaaaa tgagcaaaag cctcggaaat tcatttttta
     2341 taaaagatgc gcttgagcta gttcctggcg aagctttgcg gttttatctg atgagcagtc
     2401 attacagagc aaatttcaac tacgatatag atgatctaaa atccagcaaa aaaagacttg
     2461 ataaaattta ccgtctaaaa aaaagattga taggagttaa aaccagtaag acagatgcta
     2521 aatttaaaaa agatatttta gatgctatga gcgatgattt gaatatctcg gtggctcttg
     2581 cgatacttga tgaaatggta aataacgcaa acgcaaaact agataacgag cctaaaaaca
     2641 gagattttaa acagattttg gtttctaatt tggaatttgt aaaagagctt cttggaatac
     2701 tatatatcga tgagttcaaa tggtttcaat ggggtgtaga tgatagttta aaacaagaaa
     2761 tttcagttct catagatcaa agaaatatgg caaaaaaaga taaaaacttt atacttgccg
     2821 atcagataag agataaatta acaaatatgg atatatctat aatggatact ccaaacggca
     2881 caatgtggga gaaagtatga acggagtaaa agatgtattt aaacggttca ttccgtattt
     2941 taaagactat ataccgcaat ttgcgttagc cataatagga atgatcatgg caagcgtggg
     3001 cactgcggtt tcggcatatt tagtaaagcc tgttttagat aaaatttttg tagaaaaaaa
     3061 cgaaagtctg ttatatctgc ttccttatgc tattattgct atttattttt taaagagcct
     3121 tggaacatat cttcaagcat actttacagc atatatcggc caagatatgg taaaaagatt
     3181 tagacaaaaa ctccttgata atctgctaat tctcgatatg agctttttta ataaatttag
     3241 aacaggcgag ctaataagca gaaacacaag cgacatagaa cgcataagaa gcatagtatc
     3301 atctatgata cctgagctta caagagagtt tataacgatc atcgggctgc tagtagtagt
     3361 tatttaccaa agccctactt tggctgtttt tgctcttgtt atatttccta tagccatcta
     3421 tcccttatct agacttgcaa aaaaaatgaa aaaaatatca cgcaaatctc aagaaaaaac
     3481 aagcgacata agttcagttc taagtgaaat tttttcaaat atcgaaatag taaaagcaaa
     3541 taatgcagaa aataaagagt taaaaagatt tgatgaacat aacgagaagt tttttaggtt
     3601 aaatttaaaa agcgtaaaag taaacgagtt ggtgagtcca atgatggaaa cattaggctc
     3661 tataggagtt gctgtagtca taatcatcgg cggcaaacaa gttatagacg gaactataac
     3721 agtaggaagt tttttctcgt ttttaactgc gctttttatg ctttatacac cgataaaacg
     3781 tatatcaagt ctatataata aaatgcaaga tgcagtagcg gctagtgaaa gaacatttga
     3841 gcttcttgat agaagcgcta gcattatagg tggaaattta gagtttccta aaacggtaaa
     3901 ttctataaca ttacaagata tacactttag ttataacgat aaaaaagtgc taaaaggaat
     3961 aagtttaaaa gtaaataaag gtcaaatgat agcgattgta ggtagcagcg gaggcggtaa
     4021 aacttcactt ataaatttat taatgcgatt ttacgatgca aacagcggta gcattctcat
     4081 aaatgaaaac gatatttgcg agtttagctt aaaaagtctc agacaaaaca taggtttagt
     4141 aactcaaaga gtttatatat tcaatgagag cgtcgctgca aatgtagctt atagcggtga
     4201 aattgatgag aaaaaagtag tttgcgctct taaaacggca aatgcttata actttgtaga
     4261 taaattagac aacggaattt acactatctt agatgaattc ggagcaaatt taagcggcgg
     4321 tcaaagacaa agaatagcaa tagcaagagc tttgtataaa aatccgcaaa ttttaatatt
     4381 tgatgaagct acgagcgctt tagataatga aagcgaaaaa gagataacaa atgccataga
     4441 aacacttagc aaagataaaa taatatttgt aatagcacat agattaagca cggtaaaaaa
     4501 tgccgataaa atcgctgttt tagataacgg caaaatagta ggatttggag atgataaaac
     4561 tttagaaaat gagtgtgaag tatataagaa attgaagctc gggagcctta gttaatggta
     4621 attttaaggt tacattggct aaaattgttg attttaaagg aaggctatgg attatagaga
     4681 tattaaaaaa ctgtttttca aactagaccc agaaactgcc cataaaatag ccgaatgcgg
     4741 cttaagaaca gctgcaaatt tgccgtttgc ggcagattat ctagtagata aattttgtta
     4801 tacagataca aaattatcac aaaatatatt tgggttaaat ttcttaaatc cagttggact
     4861 cgccggtgga ttcgataaaa atgcaactat gttaagagct ctattggctc ttggatttgg
     4921 atatttagag tatggtacgc taactccaaa accgcaacca ggaaacccaa aaccgcgtct
     4981 ttttagactc atagaagaaa aaagtataca aaatgctatg ggatttaata atgatggagt
     5041 agataagata aaaaaacgag tagaaaaact ctatccgttt gccgtgccgt tatttgcaaa
     5101 tataggaaaa aacaagatta ctccaaatga agaggctata aaagattacg aacttttagt
     5161 acgcgaactt agcggatttt gcgatgcttt tgttttaaat ttaagttcgc cgaatactcc
     5221 gaatttaaga gatttgcaag aagataaatt tataacagaa ctatttgaga taataaaacc
     5281 gcttactaat aaacctatta tattaaaaat atctccggat ataaaagagg ataaagctat
     5341 acaaatatgc ttaaatgctg cgaatttggg catagacgcg attattgtaa acaatactag
     5401 tatagattat tcattaagca gtaatgcaaa aaactttggc ggcttaagcg gagctttaat
     5461 aactcaaaaa agcaaagaga tgtttaagaa catagcaaaa gagctttttg gcaaaacaat
     5521 tcttataagc tgcggaggta tagacaatgc aaaagaagct tatgagcgta taaaaatggg
     5581 agcgagttta gttcaaattt atacaagttt tatatttgaa ggtccatcta tctgcaaaaa
     5641 tataaataaa gaattagtta atcttttaac agatgatgga tttgagaata tatctcaagc
     5701 aatcggcgct aatttaagga aataaatgtt accaaaattc agtaaaataa cactaaataa
     5761 tggtcttgaa gtgtatcata cgcctttaaa tttaggctca aacgttatta gtatagatct
     5821 gttttataaa gtcggaagcc gaaatgaaac tatgggaaaa agtggaatcg cccatatgtt
     5881 agagcatcta aattttaaat ctacaaaaaa tagaaaagcc ggagaattcg atgaaatagt
     5941 aaaaggtttt ggcggagtaa ataacgcaag tacgggattt gactatactc attactttat
     6001 aaaatgttca aatcaaaact tagatacatc gctagagcta tactcagaca taatggaaaa
     6061 cttaaattta aaaaatgaag agtttttacc agaaagagat gtagttttag aagaaagaag
     6121 atggaggaca gataacgatc caatcggatt tttatatttt agactattta ataatgcctt
     6181 tatctatcac ccgtatcact ggactccgat aggatttttt acagatatac aaaactggag
     6241 catagatgat ataaaagcat tttggcaaac atattatcaa ccaaaaaatg catttttaat
     6301 gataactgga gatatagatg agcaaacggc tttcgatata tcaaaaaaac attttgaaca
     6361 tataaaaaac ggtaaagata tacctaattt ctattttaaa gagccggagc aaaacggtaa
     6421 aaaagaggta gttttacgca aacaaagtga cgtggaaatg gtagccatag catataaaat
     6481 ttcgccattt aaccatgaag atcaagttgg gctatctgct atttcagatt atctaagcag
     6541 cggtaaaagc tcacttttac aaaaaaaact catagatgag ctaaatttag taaatcaaat
     6601 ttatgcttat cctatggact gcgtagatga tggattgttt atatttatag caatttgcaa
     6661 tcctgatgtt aaagccaaac aggtacaaaa agagttatta aatttaataa aacagataaa
     6721 acaagatctc gtagaagatg aagaattgat aaaaataaaa aactcgttga aatcagattt
     6781 catctactct ttagatagtg ctagcaaact tgcaaattta tacggaagtt atatagcaag
     6841 aggagatata actcctcttt atgatttgca aaataaaacc gaatctctaa ctagttcaga
     6901 cgtacaaaaa atagcaaaaa aatattttgt aagtaaaaat tcaacaacga taatcttgaa
     6961 aggaacaaaa tgaaaaaagc catttttggg gctatgacgg ctcttataac tccatttaaa
     7021 aatggaaaac tagatgaagc aggctatgaa aagctcatca aaagacagat caaaaatggt
     7081 attgacgcta ttgtgccagt tggaactact ggggaaagtg ccactttaac tcacgatgaa
     7141 catagaattt gtatagaaat agccgtagaa acttgtaaaa atacaaaagt aaaagttcta
     7201 gccggagcag gaagcaacgc tactcatgaa gcagtggatt tggctgagtt tgcagaagct
     7261 catggagctg acggtatact ttctgtagct ccgtattata acaaaccaac tcaagaaggg
     7321 ctttatcttc attataaaaa tatagcaaac tcggtaaaaa tacctgtgct gctatataat
     7381 gttcctggtc gtaccggatg cgatatactt cctgaaaccg ttattaggct atttaacgac
     7441 tgtgaaaata tttacggagt taaagaagca agcggaagca tagatagatg tgttgatcta
     7501 ctagctcacg agccaaaact ttatgttcta agcggtgaag atgcgataaa ctaccctatt
     7561 ttaagcaatg gcggtaaagg cgttatatct gttacttcaa atttacttcc agatcaaacc
     7621 gcagcactta ctcactacgc acttgataat gagtttttaa aagcaaaaga gataaatgat
     7681 agactttata atataaataa aataatgttt tgcgaaagta atcctatacc aataaaagca
     7741 gctatgttca tagcaggtct tatagacact ttagaatata gacttccgct ttgcaaccca
     7801 agtgtagata atcttaaaaa gattgaagaa actatgaaaa gttatgatat aaaaggattt
     7861 taatgagttg ttataatgat gagtttaaag gcaaaacatt agtaataagc ggtggaacta
     7921 gaggaatcgg tagagctatt gttttagagt ttgcaaaagc cggagcaaat atagcattta
     7981 cgtataattc aaataaagaa atggctgaaa aacaagcatg tgagctagaa aaagagttta
     8041 atataaaaag cagagcatat gcgttaaata tattagagcc tgaaacatat aaagagctat
     8101 ttttacaaat agacgaggat ttcgatagag ttgatttttt catatcaaac gctataatct
     8161 caggtagagc agtagctggt ggatatacta aatttatgaa attaaaacct cgcggtataa
     8221 acaatatatt caccgcaacc gttaatgctt ttgtctgcgg aacgcaagaa gcggcaaaaa
     8281 ggatggaaaa agtcggcagc ggaagcgtta taagccttag ctcaactgga aatttggttt
     8341 atatagaaca ctacagcggt catggaaccg caaaagcagc ggtagaagct atggcaagat
     8401 acgcagcgac agaacttgga gataaaaata tccgcgtaaa cgtagtaagc ggcggtccta
     8461 tagaaactga cgctttaaga gcttttacaa attatgaaga agttagagac gccacggccg
     8521 cattaagtcc gcttggtaga atgggtcaac cgacagatct tgctggagca tgtctatttc
     8581 tatgtagctc aaaagctagt tgggtgacag ggcatacctt tataatagat ggcggtacaa
     8641 cttttaaatg agtcttaacc ttccaaattc tctagcacta cttagaatta ttcttgcacc
     8701 gttactattt tttttgctat tgcaaataga aactcaaagt aattttgcgt acataagctg
     8761 gttaaattat ttttgtgctc ttatctttgt tatagcaagt attactgatt tttttgatgg
     8821 gtatatcgct agaaattgga atcaaaaaac aaaattagga gcaatactag atcctttagc
     8881 agataaaatg cttattttag ctgctttttt aggccttatg atggtagata gagcaagtcc
     8941 ttgggctgta tatcttatac ttgttagaga gttttttata acaggatttc gggtagtaat
     9001 ggcaaccgaa aacatcgata taagtgcatc tctagcaggt aaaataaaaa cgatatttca
     9061 gatgatagct ataggattta taactatgca gtggtggggt ggggcaattt tattgtgggt
     9121 tgctgtggct cttactttat actctggata tgaatatatc tatgcgtata caaagcatat
     9181 taaaagaata tagttttact atattttatc cttttattta tttttattac tgatatatag
     9241 tagtttaaaa catatatatg ataacttgac atatttattt attttggata gtataacaaa
     9301 aatataataa aaggataaaa aatgaaaaaa atacttagcc ttatgttcgc ggcattgatt
     9361 tttataggtt gcagcagtgc aaatagcgat aaaaacgatg caccggtact aaggataggc
     9421 acagaaggaa catatagtcc atttacttat cacgataaca gtggtaaact agtaggatat
     9481 gatgtagaag ttatagaaga agcagctaaa agagccggat ttaaaccgga attttatgaa
     9541 accaactggg atgctatatt ttctggactg aattcaaatc gtttcgatat gatagcaaat
     9601 caaataagcg ataacaatcc aaaaagagct gaactttata ctcttagcaa tccttatata
     9661 gtgacatctg cggcaatagc agtaagagcg aataacgata ctataaaaag cttaaaagat
     9721 attagctttc atgtagatac gggagatatt ttagccatta taggaccgag tggaagcgga
     9781 aaaactactc ttcttaggtg tcttaattac ttagagatgc ctaataatgg tactttaagc
     9841 ttttgcgatg gatctttaaa tcttgatttt agtgagcata tcgataaaaa agatatatta
     9901 aaacttagaa gaaaaatggg tatggtattt cagtcttata atctttttcc gcataaaaca
     9961 gctcttgaaa atgtcaccga aggactcatt gtcgtacaaa aaatacatag agacgaagct
    10021 gagcacatag ctcttgaaat tattaaaaaa gtcggactta gcgataaaat aaatttatac
    10081 ccaagctcac taagcggagg tcaacaacaa agagtagcta tagcaagagc agtcgcctta
    10141 aatccggata ttttgcttct tgatgaaccg accagcgcac tagataaaga gcttgttgga
    10201 gaggtattaa atactttaaa actgcttgca aaagagaaac aaaccatggt attagtaact
    10261 catgaactaa actttgcaaa agatgtagca aataaaataa tgtttctaga aggcggtgaa
    10321 ataatcacta tagaaaatcc aaaagagttc tttgagaatc aaaaaaatcc taggatactt
    10381 aggtttttag gaaatctaag cgctaattaa taaggctaaa agtgagcata aacgataaaa
    10441 aggggttgat tttaggtatc agcacctttg cgatgtgggg cgtatttcct atatttttta
    10501 aatttataga ttcagtagga gcgatagaaa tattagctca ccgcataatc tggtctgcaa
    10561 tcatactttt tattttactt aaatttagaa ataaaatcat taatgtaaaa cgacttctaa
    10621 agataaaaaa agtcgctttg actctattta taaccggaat tttgatagct tcaaattggg
    10681 gaattttcat atatgcagta aatcaaaatc aaatcttagc aacaagtctt ggatatttta
    10741 taaatcctct tttttccata cttcttggag cgataatttt aaaagaaaaa ctaagtacaa
    10801 cgttaaaaat atctatttta atcgtatttt ttgctatatg cattcaaatt tacgcacttg
    10861 gaagcttgcc ttttatatct cttatattgc cattgtcttt tgcattatac ggacttattc
    10921 gcaagaaagt aagcattccg acttttgaag ggctttttat agaaacgctt cttttagtac
    10981 cgatagctat agcgtatatt tcatatcttg gattaaactc aaatagtaaa tttggatttg
    11041 aactaaatgg attattacta tttttaagcg gatttgttac cataatacct ctattaacct
    11101 tcaacgcatc aacaaaatac ctaaaactat ctacaatagg atttttgcag tatataagcc
    11161 ctagtttaag ccttttgatt gctatttttg tgtataatga gactcttgat agctacaagc
    11221 ttatcagttt tattttgatc tggattagct tagtaatagc tggtatcagt ggattatgga
    11281 gaaaaaatgg gtgaacaaga tattatatta atagccattg tggtgatgat aatcgcagct
    11341 attttaaatt cacaaatcaa caaactaaca aaaaagatag aaaaagatga gttaaatcca
    11401 aatttatcat attatgatag cttttgtaat gccatagatg aaaaaatctc atggcttaga
    11461 gagttagtaa ccgatggaaa tataaatgat agtgctagta aagatacttg tttagagatg
    11521 ttaagcaatt ttagcaaaga actcgttttt ttacaaacta tgaatacaaa cacaaaagat
    11581 aaagcagttt gggaagaaaa actttttaat tttttaagca aaatagacga ttttgttatt
    11641 tcaaatttaa aagatgcaga aaatgtaagc caaaaaataa aagacgattt aaaagctgaa
    11701 tttgataaat taagctcata aaccttcttt tgatctaagt atccttgtat aggcgtcctt
    11761 tatacgctct ttgcttatct tgccgctatt taccgcattt aatatcgcgt catttattat
    11821 ttttatagag tttgagttat ttaaaaaata ctcactaacc aaaactatat ccactccggc
    11881 gtttatcgct cttacgactt tttgttctat gctaagctcg ccaagacctt tcataagaag
    11941 atcgtcgctc ataactgcac ctttaaattt aaaacgattt ttcaagatat cgcttactat
    12001 atgttttgac aaaaccgccg gatttttatc atctaaattt ggtatataca cgtgagctac
    12061 catgatgaaa cttgcttgac ctcgttttat caactcaaaa tacggcttta attcatcaaa
    12121 atcgtagtta tccacaactg ttttttcttt atgagtatct ttgatagcat ttccatggcc
    12181 aggaaaatgt tttagcacag tttttatgtt tgccttgtca aatgatttta taaactcgct
    12241 actatatgct ataacttcat caggattttt actgaatgct ctattttttt gtcctattat
    12301 agatgagttt ggattataaa catcgacgac gggagcaaag ttcatattga ttccaaggtt
    12361 ttttaactga tctgccatat ctttgtatat gataccggct ttatttaaat tcatcttgct
    12421 accgacttcg taggccgatg gaaaatgctt aaagccgtct ttatttataa atctactgac
    12481 ttttccgccc tcctcgtcga tagcaatgag aagcttgtgt tttgattttg atgaagataa
    12541 ttttttcgta agtttgataa gctcgtcttt tgtgctgata tttctagcaa gaagcataac
    12601 tccgcctata cgaccaaaac ctgcatcaag tacaagttga tcagtccaac tatcatttgc
    12661 gcttgagtga ctaaatccta tcataatcat ttgacctatc atctttttaa gctctgcttc
    12721 atcatttgaa gcaccaaaca acaaataaac gctagcaaaa aatataatta attttttcat
    12781 tttcttttta ataaatcctt gagtgattct ttaacatttt ttccatttag catagcacaa
    12841 acttcagctg cgatcggcgt ataaatcgac ttttcatttg cgattcttgt gatagcatag
    12901 gctgtaggta cgccctctgc aacctctcca agctctttta aaatttcatg aataggcatt
    12961 ccttttgcaa gtccaagccc tactctataa tttcttgaaa gtacactaga agctgttaaa
    13021 aatagatctc cggctccact aagccccaaa aatgtctcat ttttagcacc gaaatacttg
    13081 ccaaaacggc tcatctcgac aagtccgcgc gatatcaagc ttgctcttgc attattccca
    13141 agcattaaac catcacaaat tccacttgcg atcgcgataa catttttata agctccgcaa
    13201 atttcactac ctataacgtc gctgcttata tatgttttga taaaatttgg aaatgcgccc
    13261 gcccaaattt ttgccaaatt ttcgttatga ctactgataa ccaaagcaca cggcaatttc
    13321 tgtgttactt cactagcaaa gctaggaccg cttaaaaatg ctaaattttc agaactggta
    13381 aattcgcaaa atatctcatc tataaattta gaactactag tttctatacc ttttgaagca
    13441 actaatattt tttgattttt atcaataaag tttaaattta aaaactcttt aatactttgc
    13501 gtagctatac taaaaacgat atattcgcat tctaaagcat cttttaaatt tacaaaatct
    13561 tccaaatctc tttttgtacg agaacttata acacaataat ttttttgctt aagagcaaaa
    13621 aaaagtgcct gtccccactt accggctcct atcactgcta ttttcatatt tacgactctt
    13681 aaagttttga ttttaacaag tcatttacct tgcttgggtt aaatgcacct tttccttctt
    13741 tcataacttg acctacgaaa aatccaaaaa gcttgtcttt tccgctttta aactcagcta
    13801 ctttatcgct atttgcagat aaaacgctat caatgatagc caaaatcgcc gaatcatcgc
    13861 tgacttgttt aagaccgagt ttttctataa cgctactaac atcttcatcg tgctccataa
    13921 cataatcaag cacgtctttt gcggcttttt gactgatagt tccgtcttct atgcgattta
    13981 ttaaatttga aagtttttta ctatcaacag gacttgtttc tatcgtaaca ccgtttttaa
    14041 gacgccctaa aagctccaca caaagccaag taacggcaag tttcggtgag ttttttgctt
    14101 ctataagatc ttcaaaatat ctcgccatct cataactact tatgatgact tcggcatcac
    14161 tctcttttat gccaagatct tttacatatc ttgccttttt ttcatctgga agttcaggca
    14221 acacactggc ttcttccatc atcttatcag gtattatgac aggaagcagg tccggatctg
    14281 ggaaataacg atactcggcg ctatcttctt tacttctcat cgactttgta acaagcttat
    14341 ttgtatcaaa aagccttgtt tcttgataaa cttcttcatc atatttgcca tcttcccaag
    14401 acagtatttg gcgctctact tcgtattcta tggctttttg gataaattta aacgaattta
    14461 ggttttttat ctcgactcta gtataaagtt tttcatcgcc ttttggacgt atgctgacat
    14521 ttacatcaca acgaaatgag ccttcttgca tatttgcgtc gctgatattt aaaaacctaa
    14581 gtatactatg aagttttttg agatacgcca ctgcttcatc gctatttcta agatctggtt
    14641 cgcttactat ctcaagaagc ggagttcctg cacggtttag gtctactaaa cttttgtttg
    14701 tttcatgatt atttttaccg gcgtcttctt caagatgagc tcttgttatg cctattcttt
    14761 ttatttcacc gcctactttt atgaaaagct cacctttttc aacgatagga atggtaaatt
    14821 gtgaaatttg atacgctttt ggaagatcgg gataaaaata gttttttcta tcaaagacac
    14881 tttttttatt tacggtcgca tttatggctt taccaaagct aatggctttc tttacggctt
    14941 ctttatttaa caccggaagt gctccaggaa gtgctagaca agtcgggcat acgtgagtgt
    15001 ttggttcatc gccaaaacta gtgctacaac tgcaaaatat ctttgttttg gtatttagct
    15061 gacaatggac ttctaatcct ataacggtct cgaacataaa attacctttt tattatctat
    15121 atttgtgtga ttttagcata aatttattga atttttaatt agcaaaatat ctgatagatg
    15181 caaatccggc ggcttttgct agttccacca tttttatatg ctttttagta gttataccac
    15241 caagcccaaa tactttaacg gatgaattta aaacgatttt ttttagggtc tctatgccga
    15301 ctggttcacc tttgtttggg gtcgaaaata tggggctaaa agttataaaa tcagcgccta
    15361 attttatagc gtcttctatc tctttttcat tgtgtgtact agcgaattta attaaacttt
    15421 gtggagtatt ttttaaattc gctatcaaat ttgagctaaa atggataccg tcggctttta
    15481 aatttaatgc taaatttaga tcgttgtgta ttataaattt agccttgaaa ttcggtttta
    15541 aactcataaa aat
//
LOCUS       DAPPKW010000039        15535 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.039, whole genome shotgun sequence.
ACCESSION   DAPPKW010000039 DAPPKW010000000
VERSION     DAPPKW010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15535
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.039"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            22..1431
                     /locus_tag="RPW04_001076"
     CDS             22..1431
                     /locus_tag="RPW04_001076"
                     /inference="COORDINATES: protein motif:HMM:NF012581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295170.1"
                     /translation="MIALLPFILSLAATFINIFLCVTNISKRYSINLNILFWVIIFIS
                     FFIVRSNFSNDFLMDFATPFISLDEFSFCFGVVLSALMIIFLISSFYSDDEKFYKQEM
                     FALASLAGFGLLAMSLSVELILTLIFLEVASISIYAMIAMNSIEYKSVEAAFKYFLLS
                     SFMSAFYLLGAAFVFGVAGSTKYSFIATGLNSDFLSIIGMILVLSMMFFKIAIFGFYR
                     WSIDVYYGSNLNIAGFLASAFKLASFAILIKLCFLYPGNNIEILQGIFAILAILSMFA
                     GNLLSLKETNVKKILIAAGIVHSGYIFINLSSVGASVSIYPAIFYLSTYTIVVGFSFA
                     ILNGLFGDREIKISDLNGLYKVRPTEAFAFTVICLSFIGFPYSVGFLGKLFIFSSAVE
                     SGKTYLAIFGIINTIFSVYYYLKIIISIYFSENKTALSCADSKKFGLKLLALSSILFI
                     ILEGSGIFSIISFLNLFIR"
     gene            1653..2408
                     /locus_tag="RPW04_001077"
     CDS             1653..2408
                     /locus_tag="RPW04_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HDX6295171.1"
                     /translation="MKAKFLAASAILTLFCTSSFAHFGVVIPSSSTVNDEKEAKMSIT
                     YRFTHPFEQMMMNMEKPVETGVFVDGKKNPISNLTEKKDGKMSYYTANYEVKNPGMYQ
                     FYVDPKPYFEAAEDKFIRHITKTVVNAYGFGEGWDSPIGLKAEIVPISRPYGLYKGNL
                     FSGIVLYKGERAKNVMVEVEYYNTKGLKAPSEDFITQEVKTNELGEFSFAMPLAGWWG
                     FSALIDDDETIKKDGKTYPVELGGVIWVETKEY"
     gene            2409..2993
                     /gene="cbiM"
                     /locus_tag="RPW04_001078"
     CDS             2409..2993
                     /gene="cbiM"
                     /locus_tag="RPW04_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt transporter CbiM"
                     /protein_id="HDX6295172.1"
                     /translation="MHISEGVLKPEIIVPAAVIGGIWIAYLLYKLKFNDIPKIACMSA
                     MFFIASFIHIPIGPTSIHLILSGLIGAFLGFNAGLAIFAALLLQALLFGYGGITVLGV
                     NLLMIASPAVLGFYFLKLSFKKFRVLNWFLVGFVPIFVSSLILSLVLALNGNEFLPVA
                     TLAFVSNLALMAIEGVISLFGISFIYKVNKDLLK"
     gene            2990..3406
                     /locus_tag="RPW04_001079"
     CDS             2990..3406
                     /locus_tag="RPW04_001079"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295173.1"
                     /translation="MIKFMLIICVAVALNAHSLKVFAKEENGFVLIKSYFYGNSPCKE
                     CKVELIKDNKILSTVKTDSKGEARAKIVASEFDILVDGGLAHEKRVSFKAENPLPIDT
                     DDSTMMYVFKFIAGFAAIAIIFGCLYIIKRRQVACS"
     gene            3747..4079
                     /locus_tag="RPW04_001080"
     CDS             3747..4079
                     /locus_tag="RPW04_001080"
                     /inference="COORDINATES: protein motif:HMM:NF016244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HDX6295174.1"
                     /translation="MKAEIANFNILVEIRSHFAWFLFAVVAILYYTLMLLIGLAPEFL
                     GLKIGSNPVSLAIIIGIFIIVTCVSLTGLYTYVANTFLDREFAGAIDRLEKAGLINED
                     GTLKKDDK"
     gene            4076..5689
                     /locus_tag="RPW04_001081"
     CDS             4076..5689
                     /locus_tag="RPW04_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation acetate symporter"
                     /protein_id="HDX6295175.1"
                     /translation="MKKILFLPIFAGSINAAEIVAGEKSDLNLTAITLFLIFVFATLI
                     ITYFSARKASGSNFYTAGGGISGFNNGMAMAGDFMSAASFLGISALVFTNGFDGLLYA
                     IGFLAGWPVVLFLIAEKFRNLGKYTFTDIAAFRLKQRPIRAISAISALVCLCFYLIAQ
                     MVGAGELIKMLFGLDYNIAVVIVGLLMVVYVFFGGMHATTWVQIIKAGLLLIGVSILA
                     FLVLKASNFDITTYFNDAIKVHPKGKAILNPGGFITDWVSAVSLGMALMFGTAGLPHI
                     LMRFFTVNSAKEARKSTFWATIFMSYFYVLVFIIGFGAIAFLTGKDVMGGTNMISIEL
                     ARILGGNAFYGFICAVAFATILAVVSGLTISGANAIAHDLYANVIKHGKVSMESELKI
                     GKIATIGIGIFAIFLGIIFQGQNVAFMVGLAFAIAASVNFPILFYSIYWKDLTTKGAF
                     WGGLIGLLTVVGLTILGPGIWVKSFGFEEAIFPYKDPAIFSMPVTFILVYLISKFDNS
                     YRAKIDRSGFEAQYFRAQSGIGANKEATH"
     gene            complement(5727..6137)
                     /locus_tag="RPW04_001082"
     CDS             complement(5727..6137)
                     /locus_tag="RPW04_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HDX6295176.1"
                     /translation="MKDMGEPRIKIVAMPSDTNPAGNIFGGWILSQIDLAGSIAAREL
                     APTRVVTISMKEVIFKEPVFIGDIVSCYAKVVSVGNTSITTVVKVVVQRLNDGGFVEC
                     VPVTTAEVTYVSVDEQGNKKPIDSELKRLHGFVC"
     gene            complement(6223..7236)
                     /gene="msrB"
                     /locus_tag="RPW04_001083"
     CDS             complement(6223..7236)
                     /gene="msrB"
                     /locus_tag="RPW04_001083"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HDX6295177.1"
                     /translation="MKKILFVVATIFMALFLNAKENDMRNLKDIYLAGGCFWGTQAYF
                     DKIRGVIKTDVGYANGKSDKTDYHSLHYSGHAETVHITFDENIVSLAEILAHYFRIID
                     PFSVNKQGNDVGSQYRTGIYYNDSSLKNSISEFIKHEQTKYDKKIAVEVEPLKNYVLA
                     EDYHQKYLDKNPGGYCHVDLSLADKPLYNEGKFKAPSKDELKAKLSDLQYSVTQEKAT
                     ERPYSSEYDKFDKKGIYVDIVSKKPLFSSSDKFDAGCGWPSFTKPITTDALGYNRDLS
                     HGMERVEVTSSLANSHLGHVFTDGPKDKGGLRYCINGASLKFIPLEDMEKEGYKDYII
                     YVK"
     gene            7412..9232
                     /gene="ciaB"
                     /locus_tag="RPW04_001084"
     CDS             7412..9232
                     /gene="ciaB"
                     /locus_tag="RPW04_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein CiaB"
                     /protein_id="HDX6295178.1"
                     /translation="MNDFAALNKLVKKQKNELNYLYKNMDNEIVSKALNLCSLDSSSV
                     NKIAVLRRIVDLKEEGIINELKNSGKNEEEIDIIKAKMYDFVSEFYINRHLNLINEVE
                     EKGILEPFYLELIKSVHRIGVSLSKMQKTWQKSIIETTNREFETKFESIAKANEFITK
                     NKLYQINPDNSRCDRVYGAVIKNGENYRLVPYAVSFKDEMKSVKDAFETSLANLEKLS
                     KIKEDESYVIYLTKLKNAFLQTDNDLVIASWQDAERAWMDTKGKIQIGHPLEYYEDAY
                     THAVALEWDIRLVDDLSIDETKFKNSIKESFDEIYSKTGVKNQNMVNLVHSNIDKTQL
                     YISGPMVYYAAEFNGLFSAQVVPNDEIVSRECGKKIFAFVNFVYESTKAKPFMKLASE
                     IFDKNFLDFGREILYKKPEIWKKVYEISTIGHEFGHILFIDSDTESAMNKSGEFKFIE
                     EYKATTGGLINFFLHEDDTYKMAVFHELIKRSVGLIAWQKVTETRAYYCEGLIHLSLL
                     FRSGVLKFDGKKLQIDFTQNGYQNFKNEVMKNYINLATHYSNKLNAGEFLAKFAKFEG
                     EIYLPKNVETLEFVKFYYQKYEKMANEIDDSGEWQKWQQA"
     gene            9343..9645
                     /locus_tag="RPW04_001085"
     CDS             9343..9645
                     /locus_tag="RPW04_001085"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011372064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDX6295179.1"
                     /translation="MKKVLFLVVALASFAFGADGEQIKAFSVVAAGIGLGVAALGGAI
                     GMGHTAAATILGTARNPGLGGKLLTTMFIALAMIEAQVIYALVIALIALYANPFLG"
     gene            9677..9762
                     /locus_tag="RPW04_001086"
     tRNA            9677..9762
                     /locus_tag="RPW04_001086"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9711..9713,aa:Leu,seq:gag)
     gene            9777..10103
                     /locus_tag="RPW04_001087"
     CDS             9777..10103
                     /locus_tag="RPW04_001087"
                     /inference="COORDINATES: protein motif:HMM:NF014721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfA family protein"
                     /protein_id="HDX6295180.1"
                     /translation="MIRNITLFFIAAFFEILGCFAFWLYFRDYKTHWWLALGVISLLI
                     FAYTLTKIDISHAGRIYAIYGGIYIISSLAWLALVEKESFNIWDILGSFLALLGAFVI
                     FFGNSK"
     gene            complement(10134..10433)
                     /locus_tag="RPW04_001088"
     CDS             complement(10134..10433)
                     /locus_tag="RPW04_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002777256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-TFIIB domain-containing protein"
                     /protein_id="HDX6295181.1"
                     /translation="MKCPVCADQNLMMSERQGVEIDYCPSCRGVWLDRGELDKIIERS
                     GAVEPKQNSQREYFDKQNHKDEYNSHRDSRYSDKYYQDGYRKKKKESFLSELFDF"
     gene            10574..11467
                     /locus_tag="RPW04_001089"
     CDS             10574..11467
                     /locus_tag="RPW04_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014474353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDX6295182.1"
                     /translation="MDYRDEILKLILKTKANYGEIQTDIKQLSFYTAIKPTEFLNTIY
                     EPSICVIIQGQKAVGFGNDLYSYNPHKYLLATTYIPARIQIEKASKDQPYISLVIKLK
                     PESIYEVIKEVGDFKIQNKKNIKNGLCFSDLDDTLLEAIAKFVKLIEKPKNDAEFLSN
                     LILKEIIYLILKQNGDLLKQYILEGNLANQISRAIMAIKNSFNENINMKKLSKEIGIS
                     ESLLYQNFKKITSLSPLQFQKKIRLEEAKNLLISTNLEASQIAFKVGYESPSQFSREY
                     ARMFGMSPKAHCNFLRDSINL"
     gene            11560..12705
                     /locus_tag="RPW04_001090"
     CDS             11560..12705
                     /locus_tag="RPW04_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HDX6295183.1"
                     /translation="MVNFSYCNPTRIEFGKGKENSIGEYLNEYGAKNVLILFGSDRVK
                     KDGLFDKATASLTKFGIKFSELGDIVSNPVLSKVYEAINLARKNGVDSVLAIGGGSVL
                     DTAKSVAAGAKYDGDVWDLFLAKAPIKDALMVFDIMTLAATGSEMNSFAVVTNEDTKE
                     KISITSSLVNPKVSVINPELMKSISKNYLVYSAADIIAHSIEGYLTATHHPEIISKLV
                     EANISTIIKTTEILLADPDNYDARAEFAWAATCALNGTTYVGVGGYSYPNHMIEHSIS
                     ALYGVPHGAGLSVVMPAWMKWYKNKNEAQFSRFAKVIFGKNSADEGIEALKTWFEKIG
                     TPTKLRDFGLDMSVSDITTAALHHAKAFGIADIYTKDVLEEILNLAY"
     gene            13020..13211
                     /locus_tag="RPW04_001091"
     CDS             13020..13211
                     /locus_tag="RPW04_001091"
                     /inference="COORDINATES: protein motif:HMM:NF024242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDX6295184.1"
                     /translation="MSGFSRKFKTLFKISPKEWIDNKRFDLALYLIKNSDKNINQICL
                     ECGFSSPAWFIARFKRNLT"
     gene            13330..13602
                     /locus_tag="RPW04_001092"
     CDS             13330..13602
                     /locus_tag="RPW04_001092"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295185.1"
                     /translation="MRKTLIAISCTALIGLSLHAKPQIIKEIEGFSHPKSVFVYDGNI
                     FVLNVGEKIEPLAKDGDGFISKLDYDGNTLQKAFIRDINVPKGLFI"
     gene            14123..14578
                     /locus_tag="RPW04_001093"
     CDS             14123..14578
                     /locus_tag="RPW04_001093"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295186.1"
                     /translation="MNKFILGVIFLVSALFSADSFTFKKANNTKEVMSNLQKSHSKQG
                     LKAKQYSKVRAYKVFYVSDFVFDSNTDELTGIYNGGQLLFYLAYNKVQGDPTIFLSKN
                     ILQNYGCDYIAQQVADCNFDLYHTRVGRNTQNIVHQTAAKMLQKKHQDA"
     gene            15218..>15535
                     /locus_tag="RPW04_001094"
     CDS             15218..>15535
                     /locus_tag="RPW04_001094"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295187.1"
                     /translation="MEIYYVNYPSSKAGYFMTSDHYKYNEIPQDYYLNSYDNSNLINT
                     KFGKAELFLDLAGDNDKLRVGSFSSNSQLFRFNSGREFVVDKLYKDTSKVFEARIELN
                     LNIN"
BASE COUNT         5357 a         2358 c         2733 g         5087 t
ORIGIN      
        1 accaaattta ggagccaaaa aatgatagcg ctattacctt ttattctctc tttggcggct
       61 acgtttataa atatattttt atgcgtcact aatatatcaa aaagatattc tataaattta
      121 aatatcttat tttgggttat aatttttata tcttttttta ttgttcgttc taatttttca
      181 aatgactttt tgatggattt tgctaccccg tttatatcgc ttgatgagtt ttcattctgt
      241 tttggcgtag ttttgtctgc tcttatgata atttttttaa tctctagttt ttatagcgat
      301 gacgaaaaat tctacaaaca agagatgttt gcactcgcat ctttagctgg ttttggcttg
      361 ttggctatga gtcttagcgt ggaactgata cttactctta tatttttaga agtagcgtct
      421 ataagcattt atgctatgat agccatgaat agcattgaat acaaaagcgt tgaagctgcg
      481 tttaagtact ttttattatc atcatttatg agtgcatttt atctgcttgg ggcggctttt
      541 gtatttggag tggctggatc tacgaaatac tcttttatag caactggatt gaatagcgat
      601 tttttaagta ttatagggat gattttagtg ctttctatga tgtttttcaa gatagcgatt
      661 tttggatttt atagatggag catagatgtg tattatggct caaatttaaa tatagcaggt
      721 tttttagcgt ctgcttttaa acttgctagt tttgccattt tgatcaagct ttgcttttta
      781 tatccgggta ataatataga aattttacaa ggcatctttg ctattttagc aattttaagt
      841 atgtttgctg ggaatttgct atctcttaaa gagacaaacg ttaaaaagat actaattgcc
      901 gctggaatag tgcattcagg gtatattttt ataaatttat cctctgttgg tgcttctgtt
      961 tccatatatc cagctatttt ttatctatct acatatacta tagtagttgg tttttcattt
     1021 gctattttaa acggactttt tggagacaga gagataaaaa tatctgattt aaacggactt
     1081 tataaagtac gtcctaccga agcttttgct tttactgtaa tttgtttgtc ttttatcggt
     1141 ttcccttata gtgtcggatt tttgggtaaa ttgtttatat tttctagcgc cgtagaaagc
     1201 ggtaagactt atttggctat ttttggtata attaatacta tattttctgt atattattac
     1261 ctaaagatta tcatcagcat atactttagc gagaataaaa ctgctctgtc ttgcgcagat
     1321 agtaagaaat ttggtttaaa actacttgct ttgagttcta ttttatttat aattttagag
     1381 ggaagcggta tattttctat aatatctttt ttaaatttat ttatcagatg agcttatttt
     1441 tagtattaaa tttaactaaa tttatacttc agatagtacg ataaatagat gttttacaga
     1501 caatatatat ttagtttgaa atttaaaaac taaatatata tttaataata tttagcttat
     1561 ttagataaca attttcattt atatatagtt ttatctaaat ttaagtttat aagtcgcata
     1621 attacggtaa tatttttata aaaaggataa taatgaaagc taaatttcta gcagcgtctg
     1681 caatcttaac tctattttgt acaagttcgt ttgcacattt tggagtagtg atcccttcta
     1741 gctcgaccgt aaatgatgaa aaagaagcga aaatgagtat aacttataga tttactcatc
     1801 cgtttgaaca gatgatgatg aatatggaaa aaccggttga aacaggagta tttgtagatg
     1861 ggaagaaaaa tccaatatca aatttaaccg agaaaaaaga tggtaaaatg agttattata
     1921 ctgcaaatta cgaagtaaaa aatcccggaa tgtatcaatt ttatgttgat ccaaagccgt
     1981 atttcgaagc ggctgaagat aagtttataa gacatattac aaaaacagtt gtaaatgctt
     2041 acggatttgg cgagggctgg gatagtccta ttggcttaaa agccgaaata gtacctatta
     2101 gtagacctta tggattatat aaaggaaatc tgttttcagg aatagtttta tataaaggag
     2161 aaagagccaa aaatgtcatg gttgaggttg aatactacaa cacgaaaggc ttaaaggcac
     2221 cttctgagga ttttatcaca caagaagtaa aaacaaatga gcttggagaa tttagttttg
     2281 ctatgcctct tgctggctgg tggggatttt cagctttaat agatgatgat gagactatta
     2341 aaaaagacgg taaaacttat ccggttgaac ttggcggtgt tatttgggtc gaaactaaag
     2401 agtattagat gcatatcagc gaaggagtat taaaaccaga gatcatagtt ccagcagctg
     2461 tgataggggg tatttggata gcgtatctac tatataaatt gaagtttaat gatattccta
     2521 agatagcttg tatgagcgct atgtttttca tagcgtcttt tatacacatt ccgattggtc
     2581 cgacttcaat tcacttaatt ttgagcggtt tgatcggggc tttcttagga ttcaatgcag
     2641 gtttggcgat atttgcagct ttacttttac aagctttgtt atttggatat ggcggtataa
     2701 ccgtgttagg agtaaatctt ttgatgatag cgtctcccgc cgtacttgga ttttattttt
     2761 taaaactttc attcaaaaaa tttagagttt taaattggtt tttagtcgga tttgtgccta
     2821 ttttcgtatc atctttgatt ttaagcttag ttttggcatt aaacggaaat gagtttttgc
     2881 cggttgcgac tttggctttt gtttcgaatt tagctcttat ggcgatagaa ggagttatat
     2941 ctctgtttgg aatatctttt atttataaag taaataagga cttattaaaa tgataaaatt
     3001 tatgctaata atctgcgtgg cagtagcttt aaatgctcac tcactaaaag tgtttgctaa
     3061 agaagaaaac ggttttgttt taatcaaaag ctatttttat ggtaattcgc cttgtaaaga
     3121 gtgtaaggtc gagctcataa aagataacaa aattctaagc actgtaaaaa cggattcaaa
     3181 aggcgaagct agagcaaaaa tagtagcgag cgagtttgat atattagtag acggcggact
     3241 tgcgcacgaa aaaagagtaa gcttcaaggc cgaaaatccg cttccgatag ataccgatga
     3301 tagcacaatg atgtatgtgt ttaaatttat agccggattt gcggctatcg caattatatt
     3361 tggctgtttg tatattataa aaagaaggca ggttgcttgc agctaaattt atcttttggc
     3421 ttggtttgcc ttgtactttt tagctttaag gtagcgctta gtagtagtat cgacgctgct
     3481 ttttttctac ctgctcttct attgttattt attagattta acactatttt tattataatt
     3541 aaaaagatgc tgtttttaaa tttatttata tttttagaat ttaatcctct ataactataa
     3601 atttaatcaa cattagatta aatttatgtt actatttgta actaatatat tatttattac
     3661 tatttgtaac atattttgat aaaaaatata tctctaaatt taataattac gatagaatat
     3721 gcttaatttt taaataagga gataaaatga aagctgaaat agccaacttc aatatattag
     3781 tagaaataag aagtcatttc gcatggtttt tatttgcagt agtggcaatt ttatactaca
     3841 ctttaatgct tctcataggg cttgcacctg aattcttagg actcaagata ggttcaaatc
     3901 ctgttagtct tgccataata ataggcattt ttataatcgt aacatgtgtt agtttaacag
     3961 ggctttatac atacgtcgca aacacatttt tagatagaga atttgcagga gccatagatc
     4021 gtttagaaaa agccggactt ataaatgaag atgggacttt aaaaaaggac gataaatgaa
     4081 aaaaatacta tttttaccga tatttgccgg ctccattaac gcggccgaga tagtagcagg
     4141 agaaaaaagc gatctaaatt taacagccat aactctgttt ttgatatttg tatttgcaac
     4201 actaatcatc acatactttt cagctagaaa agcttccgga agcaactttt acacagcagg
     4261 cggaggaatt tcgggattta acaacggtat ggcgatggcc ggagatttta tgagcgcggc
     4321 atcgttttta ggtatctcgg cacttgtttt tacaaatgga tttgatggac ttttatatgc
     4381 tataggattt ctagctggct ggcctgtagt tttgtttttg atagctgaaa aatttagaaa
     4441 tctcggtaaa tacacattta cggatatagc ggcttttaga ttaaaacaac ggcctattag
     4501 ggctatttct gctatctctg ctctagtgtg tttatgtttt tatctaatag ctcagatggt
     4561 tggagcaggc gaacttataa aaatgctttt tgggctagat tataatatcg ctgttgtcat
     4621 agtcggactt cttatggtag tatatgtgtt ttttggaggt atgcacgcaa ctacttgggt
     4681 gcagataatc aaagcggggc ttcttctaat aggagttagt attttagcgt ttttagtact
     4741 aaaagcaagc aattttgata ttacgactta ttttaacgac gctataaaag tacatccaaa
     4801 aggcaaagcc atattaaatc caggtggatt tataacagac tgggtaagtg ctgtttctct
     4861 tggcatggct cttatgttcg gaactgcagg attaccgcac attttgatga gattttttac
     4921 cgtaaattct gcaaaagaag ctagaaaaag tacattttgg gcaacaattt ttatgagcta
     4981 tttttatgtt ttagtattta taataggatt tggagctata gcatttttaa caggaaaaga
     5041 tgttatgggc ggaacaaata tgataagtat agaattagct agaatccttg gtggaaatgc
     5101 attttacggc tttatttgtg cagttgcttt tgcaactata cttgcagttg tttcaggact
     5161 aactataagt ggagcaaacg ccatagcaca cgacctgtat gcaaatgtta taaaacatgg
     5221 aaaagtatct atggaaagtg agttaaaaat aggaaaaata gcaactatag gtataggaat
     5281 atttgccata tttcttggta taatttttca aggtcaaaat gtagcattta tggtaggact
     5341 tgcttttgct atagccgcaa gcgtaaattt tcctatacta ttttactcta tatattggaa
     5401 agatcttact acaaaaggcg cattttgggg cggacttata gggcttttaa ccgtagtcgg
     5461 actaactatt ttaggacctg gaatctgggt aaaaagtttc ggatttgaag aggctatatt
     5521 tccgtataaa gatccggcta ttttttctat gccagtaaca tttatacttg tgtatttgat
     5581 atctaaattt gataattcat atagagcaaa gatcgataga agcggatttg aagctcagta
     5641 tttcagagcg caaagcggaa taggagccaa caaagaagct actcattaaa ttttggtcag
     5701 cagcaaactg ctgaccaaat acgaatttaa catacaaaac catgaagtcg ctttaattca
     5761 ctatcaatag gttttttatt accttgctca tctacgctta cgtacgttac ttcagcagta
     5821 gtaacaggaa cgcactctac aaagcctccg tcatttaaac gctgaacaac tacttttacg
     5881 accgttgtta tagatgtatt tccaacacta acaacttttg catagcagct tactatatca
     5941 cctatgaaaa caggttcttt aaagatgact tctttcatag atatagttac aactctagtt
     6001 ggagctagct ctctagcagc gattgaaccg gcgaggtcga tttgagacaa aatccacccg
     6061 ccaaatatat ttccagccgg attagtatca ctaggcatag cgacaatttt tatacgtggc
     6121 tcgcccatat ctttcatcat tatttttcct ttacaaacaa attttgaatg gctgaatttt
     6181 atctaaaatt tattaataac attttaaatt taaaaaaaat tactatttaa cataaataat
     6241 ataatcctta tagccctcct tttccatatc ttcaagcggt ataaacttca aagaagcgcc
     6301 gtttatgcag tatcttagcc ctcctttatc ttttggaccg tcggtaaaaa cgtgacctaa
     6361 atgactgtta gcaaggcttg aagtgacttc tactctttcc atgccatggc ttaaatcgcg
     6421 attatatcca agcgcgtcag tcgtgatagg tttcgtaaaa ctcggccagc cgcatcctgc
     6481 gtcaaattta tcgcttgaac taaaaagtgg ttttttgctc acgatatcta cgtaaattcc
     6541 ttttttatcg aatttatcat actcgctgct ataaggtcgc tccgtagctt tttcttgagt
     6601 tactgagtac tgtaaatcag ataattttgc cttaagttca tcttttgaag gcgctttaaa
     6661 tttgccttca ttataaagcg gcttgtctgc aaggcttaga tctacatggc agtaaccgcc
     6721 tggattttta tctaaatatt tttgatgata atcttcggct aaaacataat tcttaagcgg
     6781 ttctacttct actgcgatct ttttatcata ttttgtctgt tcgtgtttta taaattcaga
     6841 tatcgagttt tttaagctac tatcattata ataaattcca gttctatact gagaaccaac
     6901 gtcatttcct tgtttattta ccgaaaacgg atctattatc ctaaaataat gagccaaaat
     6961 ctcagccaaa cttactatat tttcatcaaa tgttatatga acagtttctg cgtgacctga
     7021 gtaatgaagt gagtggtaat cagtcttatc gctcttacca tttgcatatc caacatcggt
     7081 ttttatgact cctcgtatct tatcaaaata cgcttgagtt ccccaaaagc aacctcctgc
     7141 tagatatata tcttttaaat ttctcatatc gttctccttt gcatttaaaa acagcgccat
     7201 aaatatagtc gccaccacaa acaatatttt tttcattttt cccctttttt tagtttaaat
     7261 ttaaatgatt ttaacactac tttttaaata agattttagc actatataaa catgaatttt
     7321 agcattaaga tttgaaattt agtaagttgt ttaaaaatat taagcaattt agtgataaaa
     7381 tttatcaaaa atatatttat taaggataaa aatgaatgat ttcgcagctt taaataagct
     7441 ggtaaaaaaa caaaaaaatg agttaaacta tttatataaa aatatggaca acgagatagt
     7501 ttcaaaagcc ctaaatttgt gctctttaga tagttctagc gtcaataaaa tagcggtttt
     7561 gagacggatc gtagatttaa aagaagaagg aatcataaac gagcttaaaa acagtggtaa
     7621 aaacgaggaa gagatagata tcataaaagc taaaatgtat gattttgtaa gcgagtttta
     7681 tataaatcgc cacttaaatt tgataaacga ggtagaagaa aaaggcattt tagagccgtt
     7741 ttatctagaa cttattaagt cggtacatcg catcggcgta tctctaagca aaatgcaaaa
     7801 aacatggcaa aaaagcatca tagagactac aaacagagaa tttgaaacca aatttgaaag
     7861 tatcgcaaaa gcaaacgagt ttatcaccaa aaacaaactt tatcagataa atccggataa
     7921 ttcacgctgc gatagggttt atggcgcagt tataaaaaac ggtgagaatt ataggctagt
     7981 gccttacgca gtgtctttta aagacgagat gaaaagcgta aaagacgctt ttgaaactag
     8041 tctagcaaat ttagaaaaat taagcaaaat aaaagaagat gaaagctatg taatatactt
     8101 aacaaagcta aaaaacgcat ttttacaaac ggataatgat cttgtgatag ctagctggca
     8161 agatgctgag cgtgcatgga tggatactaa aggcaaaatt cagatcggtc atcccttaga
     8221 gtattacgaa gacgcttata ctcacgcagt agcgctcgaa tgggacatca gactagttga
     8281 tgatctaagt atcgatgaga ctaaatttaa aaatagcata aaagaaagct ttgacgagat
     8341 ctactcaaaa accggcgtaa aaaaccaaaa tatggtaaat ttagtacatt caaacataga
     8401 taaaacccag ctttatatat caggacctat ggtgtattac gctgctgagt tcaacggtct
     8461 tttttcggcg caagtcgtac caaatgatga gatagttagc cgtgagtgcg gcaaaaagat
     8521 atttgctttt gtaaatttcg tatatgaaag cacaaaggct aagcctttta tgaaattggc
     8581 aagcgaaatt tttgataaaa atttcttgga ttttggtaga gaaattttgt ataaaaagcc
     8641 tgaaatttgg aaaaaagtct atgagatctc aactatcgga catgagtttg gacatatttt
     8701 atttatagat agtgacacgg aaagcgctat gaacaaaagt ggagagttta aattcataga
     8761 agaatacaaa gctactactg gtggacttat aaatttcttt ttacatgaag acgatactta
     8821 taaaatggcc gtatttcacg agcttatcaa aagaagcgtc ggactcatag cgtggcaaaa
     8881 agtcaccgaa acaagggcgt attattgcga ggggctcatc catctaagct tactttttag
     8941 atccggagtt ttaaaatttg atggtaaaaa actgcagata gacttcactc aaaacggcta
     9001 tcaaaacttt aaaaatgaag ttatgaaaaa ctacataaat ctagcaacgc attattcaaa
     9061 caagcttaac gcaggagagt ttttggctaa atttgctaag tttgaaggcg aaatttacct
     9121 accgaaaaat gtagaaacgc tagaatttgt gaagttctac taccaaaaat atgaaaaaat
     9181 ggcaaacgag atcgatgata gcggcgaatg gcaaaaatgg cagcaagcat aaatgttaaa
     9241 tttaaagcaa atcaaagcaa atttaaaata taattacgcg ttttaagttc taagtaggga
     9301 atttatccga actaacttaa acataaaatt ttaggagcat ttatgaaaaa agttcttttt
     9361 cttgtagtag ctttagcaag ttttgctttt ggtgccgatg gcgaacaaat caaagcattt
     9421 tcagttgtag cagccggcat cggtcttggt gttgcggcac ttggtggagc tatcggtatg
     9481 ggacatactg cagcagcaac tatccttgga acagctagaa acccaggtct tggcggaaag
     9541 cttttaacta cgatgtttat cgctcttgcg atgatcgaag cgcaagttat ctatgcactt
     9601 gttatcgctc ttatcgcact ttacgctaac ccatttttag gttaatttta gccccgaatg
     9661 gggcttttgc tctactgcga tcatggtgga attggtagac acgctatctt gagggggtag
     9721 tgccgctacg gtgtgcgagt tcgagtctcg ctgatcgcac cattaccaac acaatcatga
     9781 tacgaaatat taccctattt ttcattgcgg cattttttga aatacttgga tgctttgctt
     9841 tttggctcta ttttagagat tataaaaccc attggtggct tgcgctcgga gttatttcac
     9901 ttctgatttt tgcttatact ttaactaaaa tagacatatc tcacgctgga agaatttacg
     9961 ctatttatgg tggaatttat atcataagct ctcttgcttg gttagctttg gtagaaaaag
    10021 agagctttaa tatatgggat attttaggtt catttttagc acttcttgga gcttttgtaa
    10081 tattttttgg aaactcaaaa tagatcaaac cttaaatcac tgatcaagta cgatcaaaaa
    10141 tcaaacaact cagataaaaa gctctccttt ttcttttttc tatatccgtc ttgataatat
    10201 ttatcgctat atctgctatc tctatggctg ttatattcat ctttatgatt ttgtttgtca
    10261 aaatactctc tttgactatt ttgttttggc tctacagcgc cgcttctttc tataatttta
    10321 tcaagctcac cgcgatcaag ccaaactcct ctacaagatg gacagtaatc tatttccaca
    10381 ccttgtctct cactcatcat aagattctga tctgcacaga ccggacactt cattttatct
    10441 ccttaaaaat caaatttata aaataatacc aagaaatttt taaccaacgg atataaaaaa
    10501 tgatagatat ttacagcata cggatataaa atttgaaaaa acgtagtaaa ataactctat
    10561 accaggaggt tttatggatt atagagatga aattttaaaa ctaatactta aaacaaaagc
    10621 aaactatgga gaaatacaaa ccgatataaa acagcttagt ttttatacgg ccataaaacc
    10681 taccgaattt ttaaatacta tatatgagcc atcgatttgc gtgataattc aaggtcaaaa
    10741 agcagtaggt tttggaaatg atctttatag ttacaacccc cacaaatact tacttgcgac
    10801 tacatacata ccagcaagaa ttcaaataga aaaagcctct aaagatcagc catatatctc
    10861 tttagtcatc aaacttaagc cagaaagtat atatgaggtt ataaaagaag ttggtgattt
    10921 taagatccaa aataaaaaaa atataaaaaa cggattatgc tttagtgacc ttgacgacac
    10981 acttttagag gctattgcga aatttgttaa actgatagaa aagccaaaaa atgacgcgga
    11041 atttctatct aatttaattt taaaagagat tatatatctt attttaaagc aaaatggaga
    11101 tttattaaaa caatatattt tagaaggaaa tctggcaaat caaatttcaa gagcaattat
    11161 ggctataaaa aacagcttta atgaaaatat aaatatgaaa aaattatcaa aagaaatcgg
    11221 tataagcgaa tcgcttttat atcaaaattt caaaaaaata acttcattaa gccctttaca
    11281 atttcagaaa aagatacgtt tagaagaagc aaaaaacctt ctcatatcta caaatttaga
    11341 agcatcgcaa atcgctttta aagtcggcta tgaaagccca tctcaattta gcagagagta
    11401 cgcaagaatg tttggaatgt ctccaaaagc acactgcaat tttctaagag atagcataaa
    11461 cttgtagaat caggcaatca atatggaata tttttctatc cgaaaatcaa aagaaacagt
    11521 ataattatca aaataaaaat tcagatcaag gagagaaaaa tggtaaattt ttcatattgt
    11581 aacccgacaa gaatagaatt cggtaaaggt aaagaaaata gtatcggcga gtatttgaac
    11641 gagtatggcg caaaaaatgt tttgatactt tttggcagcg atagagtgaa aaaagacgga
    11701 cttttcgata aagcaaccgc tagtttaact aaattcggta tcaaatttag cgaactaggc
    11761 gacatcgtaa gcaatccggt tttaagtaaa gtttatgaag ctataaattt agctagaaaa
    11821 aacggtgtag atagcgtgct tgccataggc ggcggctctg tgctagacac tgcaaaaagc
    11881 gtagctgccg gagcaaaata cgatggcgac gtatgggatc tatttttagc aaaagcaccg
    11941 ataaaagatg cactcatggt atttgacatc atgactttag cggcgactgg aagcgaaatg
    12001 aactcatttg ccgttgtaac aaacgaagat acaaaagaaa aaatatccat aacttcaagc
    12061 cttgtaaatc caaaagtttc agtcataaat ccagaactta tgaaatcaat ctctaaaaac
    12121 taccttgtat attcggctgc agatatcatc gctcacagta tcgaagggta tttgaccgca
    12181 actcatcatc cagagatcat cagtaaatta gtagaagcaa acatctcaac tatcatcaaa
    12241 acaacagaaa ttttactagc agatccagac aactatgacg ctagagccga gtttgcatgg
    12301 gctgcgacct gtgcactaaa tggcactact tacgtgggcg tcggtggtta ctcttatcca
    12361 aatcatatga tagagcactc tatttcagca ctttatggcg ttccacacgg cgccggactt
    12421 tcagtcgtga tgcctgcttg gatgaaatgg tacaaaaata aaaatgaagc gcaatttagt
    12481 agatttgcaa aagttatttt tggtaaaaat agtgcggatg aaggtataga agccttaaag
    12541 acttggtttg aaaagatagg aactcctacg aaactaagag attttggact tgatatgagc
    12601 gtgagcgaca tcactactgc ggcgcttcat cacgcaaaag cctttggtat agccgatatc
    12661 tatacaaaag acgtacttga agagatacta aatttagcct actaaaacga ttttgcacca
    12721 aattcggtgc aaaatccact acaatatcaa aaaatagaag aaatttgata tgatacttcc
    12781 aaatgatcta ctgcataaat ataaatttat aggcgatgat gagctgctat tgttaataca
    12841 cagctctgag ataacaaatt taaaatacca agccaaattt gaaaaaatgc ggtaatcttt
    12901 gtaaaaaacg gtaaaaaata gtttatacaa gcaaaaagag tgcggtataa actatggaga
    12961 tattcttttt ctaccttcaa aaagttatac tcttagcgat ataaaagcaa aaaatggata
    13021 tgagtggttt tagtaggaaa tttaaaacac tgtttaaaat cagcccaaaa gagtggatag
    13081 ataataaaag atttgatcta gcattatatc ttataaaaaa ctccgataaa aatataaatc
    13141 agatctgctt agagtgtgga tttagctcac ctgcttggtt tatagctagg tttaaaagaa
    13201 atttaactta actccaaatg aacttaaaaa gtcaaataac ttatataatc taccataaaa
    13261 attatacaaa taatatcaaa tttcttattt aatcttttta aatttaatca aatttaaaaa
    13321 ggaaaaacag tgagaaaaac attaatcgca atcagttgca cagcattgat aggcttaagt
    13381 ttgcacgcaa aaccacaaat cataaaagag atagaaggat ttagtcatcc aaaaagtgta
    13441 tttgtctatg acggcaatat ttttgtccta aacgtaggtg aaaagataga gccgcttgct
    13501 aaagacggtg acggatttat ctcaaagctg gattatgatg gaaatacatt gcaaaaagct
    13561 ttcattagag atataaatgt gccaaaaggt ctatttatat aagacggcaa actctacgtt
    13621 cttgatatag acgaactaaa agttttgacg taaatagcgt aaagcccgta ttttccatca
    13681 aaattgacgg agcgatattt ggcgaatttg atggtaaaaa catcaaagca gttggtgggc
    13741 taaaaggcac gtttaatggt ctagcgagcg atgagaacgc aaatttatac ctaagcgact
    13801 agaaagacgc gaaaaaagga gtcatctaca aaatatcaaa agataaaaat gaaatcctac
    13861 aactacacgg tttgcaaggt ccagcagata tgttctatga tggaaaatat ctatttgtac
    13921 cagaaatggt cggcgaaaaa ctgcttaaaa taaaactata attatatatt caaatattta
    13981 gatagatata atcaattatc tatctaaatt tatactaaac accgctttct actcacttaa
    14041 atttatctta atatgagact taaatataaa gttttttatt atatagtcaa taggattaat
    14101 atattttaca aaagaaaaaa atatgaataa atttatttta ggagttatat ttttagtttc
    14161 tgccctattt tcagcagata gttttacttt taaaaaagcg aataatacaa aagaagttat
    14221 gagtaattta caaaagtctc actcaaaaca aggtttaaaa gctaaacaat actcaaaagt
    14281 tcgtgcttat aaagtatttt atgttagtga tttcgtgttt gattcaaata ctgatgaact
    14341 tacaggcata tataatggtg ggcaattgtt attttatctg gcttataaca aagtccaagg
    14401 cgatccgaca atttttttgt ctaaaaacat attgcaaaat tatggttgtg attatattgc
    14461 tcagcaagta gctgattgca attttgactt atatcatact agagttggta gaaatactca
    14521 aaatattgtt catcagacgg cggcgaaaat gctacaaaag aaacatcagg atgcataacg
    14581 atatcttcac cttttattca aaactttttt gacgaaacaa aaactgaata aaaaactctt
    14641 tctaaatata atcgtatgac tagatttttt tagggttatg aggtaaatat gtttgcagat
    14701 atgaataaaa cggatatcag tgataaacct atatagcaac cagacttatc catagattca
    14761 aatttgataa acaaaatatt atcagatata tcagggacta cgaattattt tgaagcagat
    14821 gaattaagat tgtatgtaga tgataatatg aacgtcataa ttgttgatgt cagagcatat
    14881 taataaatat tatagggtaa gtaaatttac catatacacg tagataaatg acttaagatg
    14941 aatatcggat cactatagac aaatgtattt tatatagatg taaaccaaac attttcaaaa
    15001 aaactaaatt taagaataga tgacataaat aaagaaaata taagtgataa atctacgaat
    15061 aaacttaccg atagatttgg gcgagaagta gaaactatag attactatga tttttattac
    15121 agcgatataa atatacttca aaaatatgga accaaaacat atgcaaaaga agaagtatta
    15181 gaacttttta tggtaactca aacatatggt attttaaatg gagatatatt atgtaaatta
    15241 tccgtcatct aaagctggat attttatgac ctcagatcat tataaataca atgaaattcc
    15301 gcaagactac tacctaaact cctacgataa ctcaaatttg ataaatacta aatttggtaa
    15361 agcagaacta ttcttagatc tagcaggaga taatgataaa cttagagtag gaagctttag
    15421 ctcaaactca cagctattta gatttaatag tggaagagag tttgtagtag ataaactata
    15481 taaagataca agcaaagtat ttgaagcaag gatagaacta aacttaaata taaat
//
LOCUS       DAPPKW010000040        15287 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.040, whole genome shotgun sequence.
ACCESSION   DAPPKW010000040 DAPPKW010000000
VERSION     DAPPKW010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15287
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.040"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..2242
                     /locus_tag="RPW04_001095"
     CDS             <1..2242
                     /locus_tag="RPW04_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type IV secretion system DNA-binding
                     domain-containing protein"
                     /protein_id="HDX6295188.1"
                     /translation="ENDAIITKDGNVCIAVELKGTSYAGISLDDETDYLLSRVMFFTT
                     LKSDVEINLIIKKDKKNIEKVKDRDINPYAKEIIEKWERDQDIYSIRYFLIISTITKN
                     ITGVLESFKTKMTVEESSESSESVNLKQKMELLNETLLNINNYLSIYSPRQMSADEIL
                     NFYATYSNAKDTNLKYTNELITDCYISSYVEFKKDYIEFYRNDGTTKYARFISVKAYE
                     TEQLKSLITTNLIKSNNEFMAMIYFKAYEKRKAIKKIKDTKAFSVDLVKQELDELMEL
                     VQADRENLVQTSFSVYCLADDLKELDNKTNELKNILENQGLNVVRETINQKALYFSFF
                     PSRGNLNARKKTLNISNLSTLANFENEVTGFNKNDWGNEAVTTFKHINGTPFLFNFHY
                     QPDGDKPAGHTMIMGGTGKGKTTLAEFLMTNLFKYPINIFAMDKLRGMSNFTNYMDGE
                     YHDSESDGFKLNPFTLPDTNENREFLKTWLKFMAEIKPDEHEEKKDINNTIDRMYEMK
                     EPDQILTLSDFIISLPTDNDGKPRLKTRFDNYKDSIFDNKEDALNFKKQLSVLNMDGI
                     LTNKKISALTAIYIFHKLKNQAKNSDKGFFCFIDELKDYLLDETMREKILESILEVRK
                     IGGVMCMGFQSLSLFNQIENGSSFLDNIANFIIFPTNNAEAQTEMQSMLGLAPTEIKF
                     LNESSSREILLNMKLRNESAKLNIDLSRLGKYLKAFSSSKNNVILINKLKEESPKHWR
                     KIYLEH"
     gene            2380..3033
                     /locus_tag="RPW04_001096"
     CDS             2380..3033
                     /locus_tag="RPW04_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004319155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence protein"
                     /protein_id="HDX6295189.1"
                     /translation="MAFEDRKKDPNFIYKMERNIKAYMFYVIIALSIVSMSLSVAIAL
                     LTPLKETKPVLLKFSDADSRFVTISDTSLNVRKDEQLLKSILAGYVKNREMINRIDDI
                     ERYNEIRTQSSRQVWEAFQTLVADPNSIYTTKSYYRDIKILNVSILSANVATVDFQAE
                     ITNPSGTDKSFKKYRSAIEYDFQNQSSTYSDNIKNPTGFIVSKYRVTQILDEKEVSK"
     gene            3030..4274
                     /locus_tag="RPW04_001097"
     CDS             3030..4274
                     /locus_tag="RPW04_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbG/VirB9 family P-type conjugative transfer
                     protein"
                     /protein_id="HDX6295190.1"
                     /translation="MKNLIKLLIVLVVAINSNAQGLNDEQMNEIRAIMRQTQELVNQQ
                     QDQSMGESIFNDKTKNINKNVQTSVGINPLGIYEQKNYQEYPKATSKFQQDGYIGLDE
                     SALQETKEYSKEELELMKNAIRNQDLKALQKKFHSKKYSGFENTQIIQYTPNKTQKVR
                     TRHAMATTLIFDSPIDNYILGDQTGFKVEQIPNKEEAIAIIPQLIGIDTSLTIFTRDN
                     KIHTFYIFSTDYKNTNDPNFVIYIQDDETRKAKLAKIEKENQNYKIIKDGIAELKIKK
                     SDIYSGYVQKAQKENEWLLSAEIFDDKKFTYFKYPKDEMPQIPAIFAVIDNQDSPVET
                     RVIGDYIVAETINPRFTIKSGNSYICVGRKETKEEIDRKEIRKNLNTNKEVIKARQKE
                     SNSKIKVNKEQQKQAINRIKGI"
     gene            4276..5427
                     /locus_tag="RPW04_001098"
     CDS             4276..5427
                     /locus_tag="RPW04_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA type IV secretion system protein ComB10"
                     /protein_id="HDX6295191.1"
                     /translation="MKKGKKALFFSLVAFYAIQSPSLFADELSDEQIRHLQNETNLSH
                     LFENSKFPVDDYIYKAGKREPNKNQSDIAEALKSEKEKQNLPTSQIQIPKSVLEKIEQ
                     EEIAKRTKEKQEELLIKQKTLRQEINTDNKKAYDNKMKKLLRAQILANRNNEIKNTDN
                     TSSKYGVDGFSNQKSIDISTNEHKLYRTIRAGRMIPAILTTAISSDLNGIVTAQIEQD
                     IYATMGRAVLIPRGSKAIGFYTNDTKIGHERLEIRWREIITPQGINIMLTDAIVADNM
                     GMNGAVGAINNKYWERYGIPYSISTLTNALLLVIASKTDNSNSYTQELYSDSRSDVGT
                     VVQDMIQQQSQIKPTIEIQSGSRIFLVPTNHMWFSKPKNGEVLMKYFKE"
     gene            5442..5660
                     /locus_tag="RPW04_001099"
     CDS             5442..5660
                     /locus_tag="RPW04_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295192.1"
                     /translation="MQFEKIQNQIETELQNKKAYDKVLEKIGEQLKVTKKAEANYNKE
                     KEKLENLIVEKNKLTSTQQEIDKEQSNE"
     gene            5653..6597
                     /gene="tadA"
                     /locus_tag="RPW04_001100"
     CDS             5653..6597
                     /gene="tadA"
                     /locus_tag="RPW04_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004319283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp pilus assembly complex ATPase component
                     TadA"
                     /protein_id="HDX6295193.1"
                     /translation="MSESIILNNILGVLKPYLNLKANELIFNKPCEINIDYGDHWEII
                     NDLKLDLKFLNNFLVELATRRNQRFDETHCHLSCELPAPFLRYRVQAQHKSSLFNSEI
                     AICIRIPSKENFKLEDFILSDKVKNDGWNYEKIKELIREKKNVLLSGGTGSGKTSFLN
                     SLMGEIDPNERVVTIEDSQELRVENINKTQLAVPKIANEIYSYQIAIDNAMRLRPDRL
                     FLGEIDIRNTFSFLRVNNTGHAGNLSTLHANSPKDAIKAIKTNVILGGGISSVDDKML
                     DSLIETAIDYIIQIARVKNKRVVTDILNLKKDMRKIIA"
     gene            6594..7049
                     /locus_tag="RPW04_001101"
     CDS             6594..7049
                     /locus_tag="RPW04_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid mobilization relaxosome protein MobC"
                     /protein_id="HDX6295194.1"
                     /translation="MSSIKRKGHFIYFTQADARVLTKLANWRNESKSSVVRKLIHIAQ
                     YKDVLNEIEVNNKIISNFLKEFNHIGTNINQIAYHLNANITNNEEAKTDLEKNIIKLM
                     QKLDELNKKVDTLKININVPHTKTPSYIEKEQDGMEEYEIKREENGREK"
     gene            7033..8967
                     /locus_tag="RPW04_001102"
     CDS             7033..8967
                     /locus_tag="RPW04_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HDX6295195.1"
                     /translation="MDEKNKFSTKKWIAIFITSIIMGIVVYLAMIKIIFNPDLKYVPI
                     IALQILNNIGEPTLKLKAYVALLMLIAPFLICVIWWMMPYITDNENYGSARFATPADF
                     EKMKINYDNGLVLGCLDIDSGNPKFIRATQPLSTLVVAPPGSGKTAGMIIPNLLSVPN
                     SCLVLDIKGELYEKTAGYREKYFNNEIQLFSPFSWDNTLFFNPFDNSLIKDMQYLHIK
                     KLAEQIASTIFVGEKGQENDHWIVSAKTMFVFFAEYFMQKNKHTTLAELAQAPKADYF
                     DYLDEKFGEEAMKEIDEDDPTKERERDYDVDTFKIWLKQTSFDESIDETTRNQARAYS
                     KAAENEFASIKSTYDTFMKVFSNPQVASATSKMSFAFEDLREKRLSMYVVVQTEDMEI
                     LAPLIRIFIETLFKKLMSGQENKDPDKFIYCYLDEFVRFGKMPFLLEAPALCRSYGLL
                     PVFVTQSYEQIKKYYGEDDMNIVKNNSGYQVIFNMNSDKDAEDTSKLIGDYTNIKISK
                     SQGNMDLFKSNISKSKEGKRLVTAQDLKNQDSSDILILVKGFFKLPIKAKVPYYFLVK
                     EWKEVDKIKVVSIEKSQEESQNKPESKNETDNEKQIIMLNNEKNKNEETIEQALSETD
                     EKKIQRDELLKALKIKIKRD"
     gene            8970..9320
                     /locus_tag="RPW04_001103"
     CDS             8970..9320
                     /locus_tag="RPW04_001103"
                     /inference="COORDINATES: protein motif:HMM:NF020715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1937 family protein"
                     /protein_id="HDX6295196.1"
                     /translation="MTKWQNKKKIYIATPYEAMLKKGYSLNEVINEAKKGLNIAIIKF
                     DRNKYRFFSPVLEFGKEHKDMPRDEVMNLCFNELKKCNIIYIPNLTQSENSSGIKAEI
                     EFAKKHQITIIKEI"
     gene            9438..9677
                     /locus_tag="RPW04_001104"
     CDS             9438..9677
                     /locus_tag="RPW04_001104"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295197.1"
                     /translation="MKKIILFLLVALNLFANDEYCEKAIGDKKIKFKVFYYVCINNDL
                     FLQYYGYKQSSITQIINKSCKCINKNEMIIRGKNE"
     gene            9775..9969
                     /locus_tag="RPW04_001105"
     CDS             9775..9969
                     /locus_tag="RPW04_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295198.1"
                     /translation="MTYKEKLEQEKAYKEYEKYLAKEFEESEDGEFEISDDENKKWEY
                     LNKSHQSLEVTNEEEPSKDL"
     gene            10013..10858
                     /locus_tag="RPW04_001106"
     CDS             10013..10858
                     /locus_tag="RPW04_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009495766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HDX6295199.1"
                     /translation="MKKEQVKKSWGKMNNAEKKESFDKYAKFKIFEAHKTTKADWQRD
                     MSKEEVDNTIPYNASTGKTYSRETSMLLRAEMAIKGYDKAQFVTMEQGNMMGGTLKYK
                     VDEQTGEIQKTKSGKDARVDGVKMLYITDHIIRPKLDSDGKEIMAVVKDKDGNVKHDK
                     ETGKPITYVVKEKIPVKPYLETKTLYHVSQFDGLDQSKIKDRDLTAIKNYREEAKEQP
                     YEIRIDYGKTLGISGNLEKQLNNLSIAQIKGVDYYNPAQKLDISKEKQKTKAKKQERN
                     KGMER"
     gene            10916..11200
                     /locus_tag="RPW04_001107"
     CDS             10916..11200
                     /locus_tag="RPW04_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295200.1"
                     /translation="MLIEFLNFLGLDGKTINKNISISKDNAQNIEKSEHMEEYVIEMQ
                     SQYFKEEITRETIIKDGKKIEIKKIKTAEPLNNGKTLITTKFYKKDISRT"
     gene            11202..12413
                     /locus_tag="RPW04_001108"
     CDS             11202..12413
                     /locus_tag="RPW04_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009495770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein"
                     /protein_id="HDX6295201.1"
                     /translation="MAQEQVAKELLTDSNWINKTQNIMQENVMSLFEKFYNGSHDIVY
                     STGATTFIILIVIWWLLDKLKNGYPTRDETFEAIKYIISICFIYAMLSSFGAYNGFLY
                     LLTIPENIITAIVSSIFQNQDFGEIVTESANRVDNLRALMWDYGITKYLKDSSWSIFG
                     FEFNGIADYLMAGVVTAILMIPFWIFYAVFFILLIGIVIVIFFSKFTAFLIMSTLPLV
                     IPFLIFKRFRPYLWSWYKLYLSYAIIAPLAFIALNLAMNPILQLEKFQINVAEIFLKQ
                     FEYLITGTITCVTAIFILKRIPSWINAVLGTQMESGSGGVVAGAVAGGIAGKTLLGGL
                     ARKATGGSFIGGTLESFGRATGGNAMGHITKAGIGASVNAGKDIGRLTKTLGEQTYNA
                     YKVFRGGYATP"
     gene            12541..12777
                     /locus_tag="RPW04_001109"
     CDS             12541..12777
                     /locus_tag="RPW04_001109"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295202.1"
                     /translation="MNESLKLNLMRIFTFCFSIGSMIYLILYLKSVLPYEAFVVLMGL
                     ILLEVIVIFFYFLINGFEKTIEELSDIFRIKEQQ"
     gene            12774..13130
                     /locus_tag="RPW04_001110"
     CDS             12774..13130
                     /locus_tag="RPW04_001110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295203.1"
                     /translation="MKFIITIQEQKNTPKKYEITSLNDLIVLCEQYNIKMSEKPFNLE
                     ENKKSFLELANPKNEFFAEYKGERRAGNKRWLGSNKFDKNLIDGVCKAIKGLCLDGRG
                     ISKYEIKFKEITKKDI"
     gene            13130..15085
                     /locus_tag="RPW04_001111"
     CDS             13130..15085
                     /locus_tag="RPW04_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IA DNA topoisomerase"
                     /protein_id="HDX6295204.1"
                     /translation="MQNTIIIIESPNKCEKIEKITGAKVYATKGHFKTLTKEIVKDYQ
                     SYEPIFEFKDSSVKNRMNAIFNDCKGKDVIIATDPDREGYGIGYMVYEVIKNIAKSIK
                     RAEFHEITESGIKKGLDRAVPFANSNLKEFDSFKARAVGDKLVGYIMSPTYINKLNDK
                     NMSVGRVQTPALALVVKRELEIKAFNENPASKQVSYKIKANLKAKDGIEFSAINDHIF
                     TNKEEANAKIAEFANATAKVYQIDTKQSQIKPPAPLRTSQLQELANKRLGFSSDKTMG
                     LAQKLFEKGLITYHRTDSNALSNEFINEVEAKFKDQEWYEKREYKAGAQSQAEAHEAI
                     RISHVHGYGEINEITAKENTSDDEKALYELIYLNSILSQAKNAINENITYDINITTLS
                     FKTKTTKCIYKGFKGALKEETDDDEDKDKETLEIALNLKQGDELEILDFELGEVKKQA
                     PQRYKESNFISLLEKAGIGRPSTYATFLPILLKREYIEIQKKGKNANIVATNKGINFI
                     QSIMSDDEWISQSEFTKQMESVLDEISDGKVGYLDFIKPLHEKMGFEEPSSGETKPPS
                     QKQLEWAKNLAANLNIELPKGVEEDWKICSEFIEKNKDKDIRPPSEKQLAFAKKLASD
                     NKVELPKDIEKDMKICSKFIDKYMKKK"
     gene            15088..>15287
                     /locus_tag="RPW04_001112"
     CDS             15088..>15287
                     /locus_tag="RPW04_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009495778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit M"
                     /protein_id="HDX6295205.1"
                     /translation="MEEAKQIQALKPINQGWMAGKEKKPNIYFIKAKYEIDDEFYTSY
                     HEIKKEMEDYKEYFKDKVIVCP"
BASE COUNT         6724 a         1914 c         2645 g         4004 t
ORIGIN      
        1 cgaaaacgat gcaatcatta cgaaagatgg aaatgtatgt atagccgtag agttaaaggg
       61 aacgagttat gctgggataa gtctagatga tgagactgat tatctgctta gccgtgtaat
      121 gttttttact accttaaaaa gcgatgtaga aataaatctt ataattaaaa aagataagaa
      181 aaatatagaa aaagttaaag atagagatat aaatccatac gcaaaagaga taatagaaaa
      241 atgggaaaga gatcaagata tttattccat cagatatttt ttaattatct caacgattac
      301 gaaaaatata acaggagtac ttgaaagctt taaaacaaag atgactgttg aagaaagtag
      361 tgaaagtagc gagagtgtaa atttaaagca aaaaatggag ctattaaatg aaacactttt
      421 aaatataaat aattatttat caatttatag cccacgccaa atgagtgctg atgaaatttt
      481 aaatttttat gctacatact caaacgcaaa agatacaaat ttaaaatata caaatgagtt
      541 aattaccgat tgctatataa gctcatatgt tgagtttaaa aaagattaca tagaatttta
      601 cagaaacgat ggcacaacaa aatacgcaag atttataagt gtaaaagctt acgaaacaga
      661 acaattaaaa tcacttatta ccacaaattt aattaaaagc aataatgaat ttatggcaat
      721 gatttacttt aaagcctatg aaaaaagaaa agcaattaaa aagataaaag atacaaaagc
      781 attctcagta gatttagtaa aacaggagct tgatgagtta atggagctag tccaagcaga
      841 cagagaaaac ttagttcaga caagcttttc agtgtattgt ttagctgatg atttaaaaga
      901 gctagataat aaaacaaacg aacttaaaaa tatacttgaa aatcaaggac taaatgtagt
      961 aagagaaact attaatcaaa aggctctgta ttttagcttc ttcccaagca gaggaaattt
     1021 aaatgctaga aaaaagacac taaacataag caatttatct acacttgcaa attttgaaaa
     1081 tgaagtaact ggatttaata aaaatgattg gggtaatgaa gcagtaacta catttaaaca
     1141 tattaatgga acgccatttc ttttcaattt tcattatcaa ccagatggag ataaaccagc
     1201 aggacacaca atgataatgg ggggaacagg aaagggaaag acaacattag ctgagttttt
     1261 aatgacaaat ttatttaaat acccaataaa catatttgct atggataagc ttcgtggaat
     1321 gagtaatttt acaaactata tggacggaga atatcacgat agcgaaagtg atggatttaa
     1381 attaaatcca tttacactgc cagatacaaa tgaaaatagg gaatttttaa aaacatggct
     1441 taaatttatg gcagaaatta aacctgatga gcatgaagaa aaaaaagata ttaataacac
     1501 aatagataga atgtatgaga tgaaagagcc tgatcaaatt ctaactttaa gcgactttat
     1561 tatatctctt ccaaccgaca atgatggaaa gccaagatta aaaacaagat ttgataacta
     1621 taaagactca atttttgaca acaaagaaga tgctctaaat ttcaaaaaac agctatcagt
     1681 tttaaatatg gatggaatac taactaataa aaagatatca gccttaacgg caatttatat
     1741 atttcataaa cttaaaaatc aagccaaaaa tagcgataaa ggcttttttt gttttataga
     1801 tgagctaaaa gattatttat tagatgaaac aatgagagaa aaaatccttg agagcatttt
     1861 agaagttaga aaaataggcg gagtaatgtg tatgggcttt caaagcttaa gtctttttaa
     1921 tcaaattgaa aatggctcat catttttaga taacatagca aattttatta tttttccaac
     1981 aaataacgca gaagcacaaa cagagatgca aagtatgcta ggattagcac ctacagaaat
     2041 taaattttta aatgaaagta gctcaaggga aatactttta aatatgaaac taagaaatga
     2101 gagtgcaaaa ttaaatatag acctatctag acttggaaaa tacttaaagg cattctcatc
     2161 aagtaaaaat aatgtaattt taataaacaa gcttaaagaa gaaagtccaa aacactggcg
     2221 aaaaatatat ctagaacact aaaaagggga aaaaatgagt aaagttatag ctattatcgc
     2281 atttttaatg atattgataa gtggatgtgc agataagcca agcaagatag aaaaaataag
     2341 cccttgtgct tattgcgatt tctcaaaata ggataaaaaa tggcatttga agatagaaaa
     2401 aaagatccaa attttatata taaaatggag cgaaatataa aagcatatat gttttatgta
     2461 atcatagctt tatctattgt tagcatgagt ttatcagtag ctatagcatt attaacgcca
     2521 ttaaaggaaa caaaaccagt tttacttaaa tttagtgatg cagactctcg ctttgtaact
     2581 attagcgaca caagtcttaa tgtaaggaaa gatgaacagc tattaaaaag catactagct
     2641 ggatatgtaa aaaatagaga aatgataaat agaattgatg atatagaacg ctacaatgaa
     2701 atacgcacac aaagcagtag acaagtatgg gaagcttttc aaacattagt agctgatcca
     2761 aattcaattt atacaacaaa aagttattat agagatatta aaattttaaa tgtctcaatt
     2821 ttaagtgcaa atgttgcaac tgttgatttc caagcagaaa ttacaaatcc atcgggaaca
     2881 gataagagct ttaaaaaata tagaagtgca atagaatatg acttccaaaa ccaaagcagt
     2941 acatattcag acaatataaa aaatccaacg ggcttcatag ttagcaagta tagagtcact
     3001 caaatactag atgagaaaga agtaagcaaa tgaaaaattt aataaaacta ttaatagttc
     3061 tagttgtggc tataaactca aatgctcagg ggctaaatga tgagcagatg aatgaaataa
     3121 gagcaattat gagacaaaca caagaactag taaatcaaca acaagatcaa tctatgggtg
     3181 aaagtatttt taatgataaa acaaaaaata tcaataaaaa tgttcaaaca agtgtaggca
     3241 taaatccact tggtatatat gagcaaaaaa attatcaaga gtatccaaaa gcaacatcta
     3301 aatttcaaca agatggatat ataggattag atgaatcagc tttgcaagag acaaaagagt
     3361 atagcaaaga agagttagag cttatgaaaa atgctataag aaatcaagat ttaaaagctt
     3421 tacaaaaaaa attccattca aaaaaatata gtggatttga aaatacacaa ataatacaat
     3481 atactccaaa taaaactcaa aaagtaagaa ctcgtcatgc aatggcaaca acacttatat
     3541 ttgatagtcc aatagataat tatattttag gagaccaaac aggctttaaa gtagagcaaa
     3601 taccaaataa agaagaagca atagcaataa ttccgcaatt aataggaatt gatacaagct
     3661 taacaatttt tacaagagat aacaaaattc atacttttta tatattttca acagattata
     3721 aaaatacaaa tgatccaaac tttgtgatat atatacaaga cgatgaaaca agaaaagcca
     3781 aacttgcaaa aattgaaaaa gaaaatcaaa actataaaat tattaaagac ggcatcgcag
     3841 agctaaaaat caaaaaaagt gatatttata gcggatatgt tcaaaaagct caaaaagaga
     3901 atgaatggct actatctgct gaaatttttg atgataagaa atttacatac ttcaaatatc
     3961 caaaagatga aatgcctcaa attcctgcaa tatttgcagt aattgacaat caagatagtc
     4021 cagtagaaac aagagtaata ggagattaca tagtagctga aaccataaat ccaagattta
     4081 caatcaaaag cggcaatagc tatatatgtg taggaagaaa agagacaaaa gaagagatag
     4141 ataggaaaga gataagaaag aatttaaaca caaataaaga agtgataaaa gcaagacaaa
     4201 aagagagtaa tagcaaaata aaagtcaata aagaacagca aaaacaagca ataaacagaa
     4261 taaaaggaat atgagatgaa aaaagggaaa aaagcgttat tttttagcct tgtggcattt
     4321 tatgcaatac aatctccttc cctttttgct gatgagctaa gcgatgagca gataagacat
     4381 ttacaaaatg aaacaaattt aagtcattta tttgaaaatt caaaattccc agttgatgat
     4441 tatatttata aggcaggaaa gagagagcca aacaaaaatc agtctgatat tgccgaagct
     4501 ttaaaaagcg aaaaagaaaa acaaaatttg cctacttcac agatacaaat accaaaatcc
     4561 gtgcttgaga agatagagca agaagaaata gcaaaaagaa ctaaagaaaa gcaagaagag
     4621 ttattgatca aacaaaaaac attaagacaa gagataaata cagataataa aaaagcctat
     4681 gataataaaa tgaaaaaact tttaagagct caaattttag caaatcgtaa taatgaaatt
     4741 aaaaatacag ataacacttc atctaaatat ggagtagatg gcttttctaa tcaaaaaagc
     4801 atagatatca gcacaaatga acataagctt tacagaacaa taagggcagg acgaatgata
     4861 cctgcaattt taacaacagc aatcagtagt gatttaaacg gaatagtcac agcacaaata
     4921 gagcaagaca tatatgccac aatgggaaga gctgtattaa tcccaagggg aagcaaagca
     4981 ataggctttt atacaaatga cacaaaaatc ggacatgaga ggctagaaat caggtggaga
     5041 gaaataatca cgccacaagg cataaacata atgctaactg atgctattgt agccgataat
     5101 atgggaatga atggagcagt aggagcaatt aacaataaat actgggagag atatggcata
     5161 ccttatagta tatcaactct aacaaatgca ctgcttttag tgattgcttc aaaaactgat
     5221 aattctaata gctatacaca agaactttat tctgactcaa gaagcgatgt aggaacggta
     5281 gttcaagata tgatacaaca acaaagccaa attaaaccta caattgaaat tcaaagcgga
     5341 agtcgtatat tcttagtacc gacaaatcac atgtggttta gcaagccaaa aaatggcgaa
     5401 gtattaatga aatattttaa agaataaaaa aaggataaaa aatgcaattt gaaaaaatac
     5461 aaaatcaaat agaaacagag ctacaaaaca aaaaggcgta cgataaggta cttgaaaaga
     5521 taggagagca gctaaaggtt acaaaaaaag ctgaagcaaa ctacaacaaa gaaaaagaga
     5581 aactagaaaa tttaattgtc gaaaaaaaca agctcacatc cacacaacaa gagatagaca
     5641 aagagcaatc aaatgagtga aagcataatc ctcaataata tactaggagt attaaagcca
     5701 tatctaaatt taaaagcaaa tgagcttatt ttcaataagc cttgcgaaat aaacatagat
     5761 tatggagacc actgggaaat aataaatgac ctcaaacttg atctaaaatt cctaaataat
     5821 ttcctagtag aacttgcaac aaggagaaat caaagatttg atgaaacaca ctgccatcta
     5881 tcatgtgagc ttcctgctcc ttttttaagg tacagagttc aagctcaaca caaatcaagc
     5941 ctatttaata gcgaaatagc aatatgtata agaataccca gcaaagaaaa ttttaaatta
     6001 gaagatttta ttttaagcga taaagtaaaa aatgatggct ggaattatga aaaaattaaa
     6061 gagctaatca gagaaaagaa aaatgtgctt ttaagcggtg gaactggaag tgggaagaca
     6121 agttttttaa actcgctaat gggcgaaatt gacccaaatg aaagagtcgt aacaattgaa
     6181 gacagccaag agctaagagt agaaaacatt aataaaacgc aacttgcagt cccaaaaata
     6241 gcaaatgaaa tttatagtta tcaaatagca atagataatg caatgagact aagacctgat
     6301 agattattct taggtgaaat tgacataaga aatacattct cattcttaag agtaaataat
     6361 acaggtcatg ctggaaattt aagcacatta catgcaaata gcccaaagga tgctataaag
     6421 gcaataaaaa caaatgtgat actaggtggt ggaatttcaa gtgtagatga taagatgtta
     6481 gatagcttaa tagaaactgc aatagattac ataatccaaa tagctagagt taaaaacaaa
     6541 agagtagtaa ctgatatctt aaatttaaaa aaagatatgc ggaaaataat agcatgagta
     6601 gcataaaaag aaaaggtcat tttatatatt ttacccaagc tgatgctagg gtacttacaa
     6661 aacttgctaa ttggcgaaat gaaagcaaat cttcagtagt taggaaacta atacatatag
     6721 cacaatataa agatgtctta aacgaaatag aagtcaataa taaaatcata tctaattttt
     6781 taaaagaatt taaccatatt ggaacaaata taaatcagat agcctatcat cttaacgcaa
     6841 atataacaaa caatgaagaa gcaaaaacag atcttgaaaa aaatattata aagctaatgc
     6901 aaaagttaga tgagttaaac aaaaaagttg atacattaaa aatcaatata aatgtaccac
     6961 atacaaaaac tccaagttac atagaaaaag aacaagatgg tatggaagaa tatgagataa
     7021 aaagggaaga aaatggacga gaaaaataaa tttagcacca aaaaatggat agctattttt
     7081 attacatcaa tcattatggg aatagtcgta tatttagcta tgattaaaat catttttaat
     7141 ccagacctaa aatatgtccc gatcatagct cttcaaattt taaacaatat cggagaacca
     7201 acacttaaac ttaaggctta tgttgcactt ttaatgttaa tagccccttt tttaatctgt
     7261 gtgatatggt ggatgatgcc atatataaca gataatgaaa actatggctc tgctagattt
     7321 gcaacaccag ctgactttga aaaaatgaaa attaactatg ataatggatt ggttcttgga
     7381 tgtcttgata tagatagtgg aaatcctaaa tttataagag caacccaacc actttcaact
     7441 ctagtagtcg cacctcctgg aagtggtaaa acagctggta tgattattcc aaatttacta
     7501 agtgttccaa actcatgctt agttctcgat ataaaaggag agctatacga aaagacagct
     7561 ggatatagag aaaaatactt taataatgaa attcaactat tctctccctt ttcgtgggat
     7621 aatacactat tttttaatcc atttgacaat agtttaataa aagatatgca atatcttcat
     7681 attaaaaaat tagcagaaca aatagcatct acgatatttg taggagaaaa agggcaagaa
     7741 aatgaccact ggatagtatc ggctaaaaca atgtttgtat tttttgctga gtattttatg
     7801 caaaaaaata aacacaccac acttgcagaa cttgcacaag ccccaaaagc tgattatttt
     7861 gattatcttg atgagaagtt tggtgaagaa gctatgaaag agatagatga agatgaccca
     7921 actaaagaaa gagaacgaga ctacgatgta gatactttta aaatttggct aaaacaaact
     7981 agctttgatg agagcataga tgaaactaca agaaatcaag caagagctta ctcaaaagct
     8041 gcagaaaatg agtttgctag tataaaatca acatatgata cttttatgaa agtttttagc
     8101 aacccacaag ttgcaagtgc aacaagtaag atgagctttg catttgaaga tttaagagaa
     8161 aaacgactct caatgtatgt ggtagttcaa actgaagata tggaaattct agctccactg
     8221 attagaattt ttatagaaac attatttaaa aagctcatga gtgggcaaga aaataaagac
     8281 cctgataaat ttatatactg ctatttagat gaatttgtaa gatttggaaa aatgccattt
     8341 ttactagaag ccccagcact atgtagaagc tatggcttac ttccagtatt tgtaacgcaa
     8401 agctacgaac aaatcaaaaa atactatggc gaagatgata tgaatatcgt aaaaaataat
     8461 agcggatatc aagttatttt taatatgaat agcgataaag atgcagaaga tacaagtaaa
     8521 ttaataggag attataccaa tataaaaatt agtaaatcac aaggcaatat ggatctattt
     8581 aaaagcaata tttcaaagag caaagagggc aaaagattag taactgccca agatttaaaa
     8641 aatcaagata gcagtgatat tttaattcta gttaaaggct tttttaaact accaataaaa
     8701 gcaaaagttc cttactactt cttagtaaaa gagtggaaag aggttgataa aataaaagta
     8761 gtatcaatag aaaaatctca agaagagtca caaaacaaac ctgagagcaa aaacgaaaca
     8821 gacaatgaaa aacagataat catgttgaat aacgaaaaga ataaaaacga agaaacaata
     8881 gaacaggcac taagcgaaac tgatgagaaa aaaatacaaa gagatgagct attaaaggca
     8941 ttaaaaatca aaataaaaag agactaaaaa tgacaaaatg gcaaaacaaa aagaaaattt
     9001 atatcgcaac accatacgaa gctatgctaa agaaaggtta tagcttaaat gaagttataa
     9061 acgaagcaaa aaaaggatta aacatagcaa ttattaaatt tgatcgcaat aaatatagat
     9121 tttttagtcc tgtgcttgaa tttggaaaag agcataagga tatgccaaga gatgaagtga
     9181 tgaatttatg ttttaatgag ttaaaaaaat gcaatatcat atacattcca aatttaacac
     9241 aaagtgagaa tagtagtggc ataaaagccg agattgagtt tgctaaaaag catcaaataa
     9301 caattataaa agaaatttaa tttttaggta ttgttatgaa aacaatatcc gagacatacg
     9361 aagagatgat gggttttccg agaatgtgga gcgagttgga atgctaggtt tataaaacat
     9421 atagaaaagg atagaaaatg aaaaaaataa tcttattttt attggtagct ttaaatttgt
     9481 ttgctaatga tgaatattgt gaaaaagcaa taggagataa aaaaataaag tttaaagttt
     9541 tttattatgt ttgtataaat aatgatttgt ttttgcagta ttatggttat aaacaatctt
     9601 caataacaca aataataaat aaaagttgta agtgtataaa caaaaatgag atgattataa
     9661 ggggtaaaaa tgaatgataa atatatcaaa acaaggatct aatttaaatt ttaatacaaa
     9721 tttaaagttt agattagagc ctaaaaactc taaatctatc ctaaggagta aaaagtgact
     9781 tacaaagaaa aactagagca agaaaaagca tacaaagagt atgaaaaata tcttgctaag
     9841 gagtttgaag aaagcgagga tggcgaattt gaaataagtg acgatgaaaa taaaaagtgg
     9901 gaatatttaa ataaatctca ccaaagctta gaagtcacaa atgaagaaga gcctagcaaa
     9961 gacttataat tacaaaaagt tataagtaaa taacagatat aaaggaaaaa aaatgaaaaa
    10021 agaacaagta aaaaagagtt ggggaaagat gaacaatgcc gagaaaaaag agagtttcga
    10081 taaatatgcg aaatttaaaa tttttgaagc tcataaaacc acaaaagctg attggcaaag
    10141 ggatatgagt aaagaagaag tcgataatac aataccatat aatgcatcaa caggcaaaac
    10201 atactcaaga gaaaccagta tgttattaag agcagaaatg gcaataaaag gatatgataa
    10261 agctcaattt gtaacaatgg aacaaggcaa catgatgggt gggacattga aatacaaagt
    10321 tgatgagcaa actggcgaaa ttcaaaagac caaaagcggt aaagatgcaa gagtggatgg
    10381 tgtaaaaatg ctttatatta ctgaccatat aattagacca aagcttgata gcgatggaaa
    10441 agaaataatg gccgtagtaa aagataaaga tggtaatgtt aaacacgata aagaaactgg
    10501 caaaccaatt acttatgtag tcaaggaaaa aataccagtt aaaccatatt tagagacaaa
    10561 gactctctat catgtaagtc agtttgacgg gttagaccaa agcaagataa aagataggga
    10621 tttaacagca attaaaaatt accgagaaga agctaaagaa caaccatatg aaataagaat
    10681 tgattatggt aaaactttag gaattagtgg taatttagaa aagcagctaa ataatctaag
    10741 tatagcccaa attaaaggtg ttgattacta caacccagct caaaaacttg atatttcaaa
    10801 agaaaagcaa aaaacaaaag ctaaaaagca agagcgaaac aaaggcatgg aaaggtaata
    10861 gtaagtatga aacttaggat ggatggggcg aaagccccaa atttaaagga ataaaatgtt
    10921 gattgaattt ttaaattttt taggacttga tggtaaaact ataaacaaaa atatatcaat
    10981 aagcaaagat aatgctcaaa atatagaaaa atcagaacat atggaagagt atgtgataga
    11041 gatgcaaagt caatatttta aagaagagat aacaagagaa actataataa aagacggcaa
    11101 aaaaatagaa attaagaaaa taaaaacagc agaaccacta aataatggca aaacattaat
    11161 aacaacaaaa ttttataaaa aagatatatc aaggacataa aatggcacag gagcaagtag
    11221 caaaagaact tttaacagat agcaattgga taaataaaac ccaaaacatt atgcaagaaa
    11281 atgtgatgag tttatttgaa aaattttata atggatctca cgatatagtg tattcaacag
    11341 gagcaacaac atttataata ctaattgtaa tatggtggtt actagataag ctcaaaaatg
    11401 gctatccaac aagagatgag acgtttgaag caataaaata tataatttca atttgtttta
    11461 tatacgcaat gttaagttct tttggtgctt ataatggatt tttatattta ttaacaattc
    11521 ctgaaaatat cataactgca atagtcagct caatttttca aaatcaagac tttggagaaa
    11581 ttgtaacaga atcggcaaat agagtagata atttgagagc attaatgtgg gattatggaa
    11641 taacaaaata tttaaaagac tcttcatggt caatatttgg atttgaattt aatggcatag
    11701 ccgactattt aatggcagga gtagtaacag caattttaat gataccattt tggatatttt
    11761 atgcagtatt ttttattctt ttgattggaa ttgtaatagt gatatttttt agtaaattta
    11821 cagcattttt aataatgtca acattgccat tagtcattcc ctttttaata tttaaaagat
    11881 ttagaccata tttgtggagc tggtataagc tttatttatc atacgcaatt attgctcctt
    11941 tagcctttat agctttaaat ttagcaatga atccgatatt gcaactagaa aaatttcaaa
    12001 tcaatgtagc tgaaatattt ttaaaacaat ttgaatattt aataactgga actattactt
    12061 gtgttacagc aatttttata cttaaaagaa ttccaagctg gatcaatgca gtacttggca
    12121 ctcaaatgga aagtggaagt gggggagtgg ttgcaggagc agtagcaggc ggaatagctg
    12181 gaaaaacact acttggtgga ctagcaagaa aagcaacggg cggaagtttt ataggtggaa
    12241 cacttgagag ctttggtagg gcaacaggtg gaaatgcaat gggacatatt acaaaagcag
    12301 ggattggggc tagtgtcaat gcaggaaaag atataggcag gttaacaaaa acattaggag
    12361 aacagacata taacgcttat aaagtattca ggggtggata cgcaacacca taaaagatga
    12421 aaaaaaaagg ggggggggaa gaaaatgaaa aagatttttt ctaataaaac aaacaatgaa
    12481 attttacata tttttatcag tatttttaag taattataat aataaataga aagggaaata
    12541 atgaatgaga gcttaaaatt aaatttaatg agaattttta cattttgttt ttctattgga
    12601 tcaatgattt atttaatttt atatttgaaa agcgttttgc cgtatgaagc atttgtagtc
    12661 cttatgggac taatattact tgaagtaata gttatatttt tttatttttt gataaacggt
    12721 tttgaaaaaa ccatagaaga attatcagat atatttagaa taaaggaaca acaatgaaat
    12781 ttataattac aattcaagag cagaaaaaca caccaaaaaa gtatgaaatt actagcttaa
    12841 atgatttaat agttttatgc gaacaataca atattaaaat gagtgaaaaa ccttttaatt
    12901 tagaagaaaa taagaaaagt tttcttgaat tggctaatcc caaaaatgaa tttttcgcag
    12961 aatataaagg cgaaagaaga gctggtaata aaaggtggct tggaagcaat aaatttgata
    13021 aaaatttaat tgatggagtt tgcaaggcta taaaaggtct ttgtttagat ggacgcggta
    13081 tttcaaaata tgaaatcaaa tttaaagaaa taactaaaaa ggatatatga tgcaaaatac
    13141 aataatcata attgaaagcc caaataaatg cgaaaaaata gaaaagataa caggtgcaaa
    13201 ggtatatgct acaaaagggc attttaagac tttaaccaaa gagatagtaa aagattatca
    13261 aagctatgag ccaatttttg aatttaaaga tagcagtgtt aaaaacagaa tgaatgcaat
    13321 ttttaatgac tgcaagggca aggatgtaat aattgcaaca gatcctgata gagaaggata
    13381 tggaattggc tatatggtct atgaagtcat aaaaaatata gcaaaaagca taaaaagggc
    13441 tgaatttcat gagataacag aaagtgggat taaaaaagga ctggatcgtg ccgtgccatt
    13501 tgcaaactca aatttgaaag aatttgatag ttttaaagca agagcggttg gcgataaact
    13561 agttggatat attatgagtc caacttatat caataaacta aatgataaaa atatgagtgt
    13621 aggtagagtt caaactccag cacttgcctt agttgttaaa agagaacttg aaatcaaagc
    13681 ttttaatgaa aatccagcat ctaaacaagt aagttataaa atcaaagcaa atttaaaagc
    13741 aaaagatggc atagagttta gtgccataaa tgatcatata ttcacaaaca aggaagaagc
    13801 aaatgcaaaa atagccgaat ttgctaatgc aacagcaaaa gtgtatcaaa tagatacaaa
    13861 acaaagccaa ataaagccac ctgcaccact aagaacaagt cagttgcaag agttggcaaa
    13921 taagcgtctt ggttttagct cagataaaac aatggggtta gcacagaaat tatttgaaaa
    13981 gggattaatt acttatcaca gaacagatag taatgcatta tcaaatgaat ttataaatga
    14041 agtagaagca aaatttaaag atcaagagtg gtatgaaaaa agggaatata aagcaggagc
    14101 tcaaagtcaa gccgaagctc acgaagctat aagaatatcg catgtccatg gatatggaga
    14161 aataaatgaa ataacagcca aagaaaacac aagtgatgat gaaaaggcac tatatgagct
    14221 aatttattta aactcaattt tgagtcaagc aaagaacgct attaatgaaa atatcacata
    14281 cgatataaac attacaacgc taagcttcaa aacaaagaca actaaatgta tttataaagg
    14341 ctttaaaggg gcattaaagg aagaaactga tgatgatgaa gataaagaca aggaaacact
    14401 agaaatagcc ttaaatttaa agcaaggcga tgaattagaa atactagact ttgaacttgg
    14461 agaagttaaa aaacaagccc cacaaagata taaagagagc aacttcatct cccttttaga
    14521 aaaagctgga attggaagac caagcacata tgctacattt ttaccaatac tgctaaaaag
    14581 agagtatata gaaattcaaa aaaagggaaa aaatgcaaat atagtggcga caaataaagg
    14641 tataaatttt atacaaagca ttatgagtga tgatgagtgg atatcacaaa gcgaatttac
    14701 aaaacaaatg gaaagtgtgt tggatgaaat aagcgatgga aaggtgggtt atttagattt
    14761 tataaaacca ctacacgaaa aaatgggatt tgaagagcca agcagtggag aaacaaaacc
    14821 accaagccaa aaacaactag aatgggctaa aaacttagct gcaaatttaa atatagaact
    14881 gccaaaaggg gttgaagaag actggaaaat atgctctgaa tttatagaga aaaacaaaga
    14941 caaagacata agaccgccta gtgaaaaaca actagcattt gctaaaaagt tggcatctga
    15001 caacaaagta gaactaccaa aagatattga aaaagatatg aaaatttgct caaaatttat
    15061 agataaatat atgaaaaaga aataaaaatg gaagaagcaa agcaaatcca agcactaaaa
    15121 ccaataaatc aaggttggat ggcaggtaag gagaaaaaac caaacatcta ttttataaaa
    15181 gcaaaatatg aaatagatga tgagttttat acaagctatc atgagataaa aaaagaaatg
    15241 gaagattata aagagtattt taaagataaa gtcatcgtct gcccttg
//
LOCUS       DAPPKW010000041        15272 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.041, whole genome shotgun sequence.
ACCESSION   DAPPKW010000041 DAPPKW010000000
VERSION     DAPPKW010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 15272)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15272)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15272
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.041"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(277..1065)
                     /gene="flgG"
                     /locus_tag="RPW04_001113"
     CDS             complement(277..1065)
                     /gene="flgG"
                     /locus_tag="RPW04_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002942100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HDX6295206.1"
                     /translation="MIRSLYTAATGMVAQQTQIDTTSHNIANVNTIGYKKNRAEFADL
                     MYQTMQYAGTPTSTTTMSPTGMEVGLGVRPTAITKVFGQGYFKETGNNLDMVIAGNGF
                     FQIQLPDGTTAYTRNGAFKLDGDGSIVNSDGYRLLPEMNIPADATQISVGVDGTVSVL
                     QPGNQEMTQIGQIELANFINPSGLHAMGDNNFLETAASGAPNIGNGGTDGFGQIKQGF
                     VEMSNVQLVEEMTDLITGQRAYEANSKAITTADEMLQTVNQLKR"
     gene            complement(1084..1896)
                     /locus_tag="RPW04_001114"
     CDS             complement(1084..1896)
                     /locus_tag="RPW04_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body protein"
                     /protein_id="HDX6295207.1"
                     /translation="MQNGYYQATGAMVTQFNRLDVITNNLANVNTIGYKRDDVVIADF
                     ERIFKETRDILPLENHTRDAAKFLNRTIDRVPQINEIYTDFNVGGLKMTNNPLDVAIG
                     KSDLFLLVDTPNGVRLTKNGALNLDNEGYIVTKEGYRVLPNNYENQPEEVRGIQIPQD
                     APVTIDKDGNIYSNNENVGRFFIAQPREIRNLQKEGDNLFVLPNLNELNDVENSGSVA
                     QGYSQISNVNPVIEMVNLVETNRLVDMYQRVMSTHMNDINQEAITKLASPKV"
     gene            2053..3924
                     /gene="rpoD"
                     /locus_tag="RPW04_001115"
     CDS             2053..3924
                     /gene="rpoD"
                     /locus_tag="RPW04_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDX6295208.1"
                     /translation="MSAAKETFAQIEELFKENSKGYVTFEKLVRLFDKAPTVATIKKV
                     ETLAELYKIQLISAVEAAKIKNIQEAKKSEEDKLKIIDTALEEEFDLTSENDLLEWSR
                     SDSPVRMYLREMGQISLLTKEEEVEISKKIELGEDIIIDAFCSVPYLIDFILDYKEPL
                     INRERRVKELFKSFDEEESEEEEEETTEDEFEYDENEEDSATAKKQPKKLDKRAEKVI
                     ESFKALEKAKKEWMKIVAKQNISIEEEADLVAKLNLTFKKKVLKDKLMDLGPTSKLIN
                     EIVKSMETALKSDDDFDKELKRLEYRLPMFSAELKKNHQGILKDITKLSKEDIISRVP
                     EATMVSTYVEIKKLFQTKEASKTGFNLEPKELKIVLDQIKRGKNISDDAKARMAKSNL
                     RLVVSIAKRYTNRGLPFLDLIQEGNIGLMKAVDKFEYKKGYKFSTYATWWIRQAISRA
                     IADQARTIRIPIHMIETINRINKINRKYLQEEGKEPDVSIIAREVGLSIDKVKQVIKI
                     TKEPISLEAPIGSEDDGKYGDFVEDKTNLSPMEQILKGDLKEQIDEVLDQLNDREKAV
                     IRMRFGLLEDESDRTLEEIGKELNVTRERVRQIESSAIKKLKHPKVGRKLKNYIEGN"
     gene            complement(3975..4727)
                     /locus_tag="RPW04_001116"
     CDS             complement(3975..4727)
                     /locus_tag="RPW04_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin"
                     /protein_id="HDX6295209.1"
                     /translation="MKIGDYTNSNQNYYLDSAQKNASKALENISAQRALSGTDSSNLL
                     IADSLRSSASSISQGVNNANDAIGVLQIADATLQNLGKGADRLNELSVRANSAINGPE
                     QISALNKEANALKTSMQDSLNSASFNGKNIFGNSLSFQTGNGEVGINLTAPNVNSLDI
                     SNQNTISDFLKSVNSLRTDIGSLQNGLISGINASLTAVTSTKASESQLQNNDLANNVN
                     NYNNANLLVNSSTMVAAHNMQTLQRQVSGLLG"
     gene            complement(4784..6070)
                     /gene="hisD"
                     /locus_tag="RPW04_001117"
     CDS             complement(4784..6070)
                     /gene="hisD"
                     /locus_tag="RPW04_001117"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004322730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDX6295210.1"
                     /translation="MKILYSNDSNFKQDFDKLVNRSNLDMQNVMETVNNIISDIKEYG
                     DEALNEQIFKFDKWKVNGDLQIERSDMENAYNNLDPDLKKSLSIAYERIKIYHEKQLE
                     KTWLSFEDNGSILGQKVTPVDRAGLYIPGGKAAYPSSLLMNAAPAIVAGVKDIVVCTP
                     AVGGNVNELLLGAMHLLGIEYAYKVGGASAIAAMAYGTKTIKKVDVITGPGNIYVATA
                     KKLVFGDVNIDMIAGPSEIGIIAGDSANPHHIAIDLLSQAEHDEIASSFLITFSDKFA
                     NSVKDEIYKILPTLSREKIARASIDNKSAIIVAKDMDECIDLMNDLAVEHLEIATNNA
                     FEYLARIKHAGAIFLGHYTPEAIGDYLAGPNHTLPTGGSARFFSPLGVSNFVKKSSII
                     SMNKSSINELGKACMSLAKAEGLGAHELSVKVRYES"
     gene            complement(6094..6966)
                     /locus_tag="RPW04_001118"
     CDS             complement(6094..6966)
                     /locus_tag="RPW04_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-aminocyclopropane-1-carboxylate deaminase"
                     /protein_id="HDX6295211.1"
                     /translation="MQGNFDNFECVNFRGRSFWILRDDKIGGEFNGNKARKLEYFLNS
                     DLSGFKRIISYGSNQSNAMYSLSVFAKMKGLEFIYVTDHLSGFLKERPSGNLALALRN
                     GMVIYESKNRADFASNLKNIDDILIPEGVAMSEAEYGFKTQAKLIEDFSNQIGFKFDI
                     FLPSGTGASAAYLAKNLSQMKVYTTPCVGDRDYLASMVLNLDKDSKLNILNPPKKYHF
                     GNLKRELFDIYKELKDSTNVEFELLYDSVGWLSLLYNLTEFKNKILYIHQGGIIGNES
                     LLERYKRKFKLDMV"
     gene            complement(6956..7960)
                     /locus_tag="RPW04_001119"
     CDS             complement(6956..7960)
                     /locus_tag="RPW04_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDX6295212.1"
                     /translation="MKLDNSRDERSNFWISYADLMAGLLFVFVLLIGAIVVKYVLTQA
                     DLNALRIDLNKKVEALAFSSDELNKKEKAIKDFIEKLQNAKDRNLALSEINALFNEKL
                     AELSIQLGDINSTLRVVNEENKELSSIINLKDEQISDLKIALTQKESEYNSVLADLNS
                     TKERIKDLGGIKLKVISDLKQKLGNSIRIDANSGSVSLPSSILFDTNSFMLKDSARFD
                     LRRTLKAYFDVLLSDEIRPNIDRIVIEGHTDSDGSYLYNLELSQKRAYEVMKFIYSFY
                     KNEELGKYLIASGRSFSDLVYKNGVEDKEASRRIEIKFSISDKATIKEIEKILNQNAR
                     "
     gene            complement(7947..9272)
                     /locus_tag="RPW04_001120"
     CDS             complement(7947..9272)
                     /locus_tag="RPW04_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HDX6295213.1"
                     /translation="MDKNDAFSDLLLPDSGKRQSKVVYFKIVFLPVLIYAIFLLGYFR
                     IINFSVELHTIVMMGVILFIAMLFARHSVELGCCLFEQRKDEFKRDLKSYIMKSLLII
                     GKDQKSNGSFDEFVKRYSNDVRNDNYASVGAGIFPMLGILGTFLSIAISMPNFSSSST
                     EALETEISTLLSGVGTAFYVSIYGIFLALWWIFFERFGMSRFEKLIARQKNATSTFFW
                     TKEEIEQRYMQESLGNFEKISVIFEHVSKQEFFEELNKAVERKFQNFSDMLKVEEDAV
                     KLSSEHIKHTMGMLIKSQRDQKDMVKVHAEIINVLNSFNLNLKEMQLRFSEHYTRLQS
                     ASDDKITKLERSVNDLGGNISKFENSLEGFSVEILEKQKQALEGFRAAMIDGMQAFRE
                     VFDDEGAKGDESSKIIEELKKSIQEIDDETNSALEKLEVNTEANQDEIR"
     gene            complement(9361..10425)
                     /gene="fbaA"
                     /locus_tag="RPW04_001121"
     CDS             complement(9361..10425)
                     /gene="fbaA"
                     /locus_tag="RPW04_001121"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HDX6295214.1"
                     /translation="MGVLDIVKAGVLSGDDITKLYAYAKQEGFAIPAVNVVGSNSVNA
                     VLEAAKRANSPVIIQFSNGGAGFFAGKSCPKPDILGAIVGAKHVHLLAREYGIPVVLH
                     TDHAARKLLPWIDGLIEASREHKKVFGRPLFSSHMLDLSEESLEENISTCKEYLKNLS
                     ELDISLEIELGVTGGEEDGVDNSGVDNSLLYTQPSEVAYAYSELGKISDKFSIAASFG
                     NVHGVYKPGNVVLRPEILKNSQEFIKHKFSLNDDKPVNFVFHGGSGSELKDIKNAVSY
                     GVVKMNIDTDTQWAFWDGVREYEAAHHGYLQSQIGNPEGEDKPNKKYYDPRKWLRSGE
                     ESMIKRLLEAFDNLNCMNKN"
     gene            complement(10435..11244)
                     /locus_tag="RPW04_001122"
     CDS             complement(10435..11244)
                     /locus_tag="RPW04_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002852119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDX6295215.1"
                     /translation="MKKGVILALSLAAAVSLNAAVLATVNGQNITDEDLAPVLGPHGS
                     ETSNVPADMKKNLLDRVIERKLMLDQAKKDGIEKDDEFKKVVKELEDNVAINIWMKKQ
                     FDAIKVDEKKAKDFYEQNKDKFVVPAQAKAKHILVETEKEAADIIKSLNGLKGAALDK
                     KFSEIAKEKSIDKSSAVNGGELGWFGESQMVASFSKAAFGLKKGEITNKPVKSEFGYH
                     VILKEDMKDKSAVGFDKAKANIENQMKSEEFRTVMQKKVSDLKKDAKIEYK"
     gene            11343..11975
                     /locus_tag="RPW04_001123"
     CDS             11343..11975
                     /locus_tag="RPW04_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDX6295216.1"
                     /translation="MRTKKDIKQIKELFLQNFSGAKSELKFKNLYELLVCVMLSAQCT
                     DKRVNLITPELFNAYPDIKSLSEANLASLKLLINSCSFFNNKAANLIKMAKSVMDEFG
                     GDIPLEEKELIKLAGVGQKTAHVVLIEHQNANLMAVDTHVFRVSHRLNLSDAKTPQAT
                     EIDLTKAFKTELNTLHQAMVLFGRYTCKALKPQCENCFLKELCSSEDKVI"
     gene            complement(11968..13269)
                     /locus_tag="RPW04_001124"
     CDS             complement(11968..13269)
                     /locus_tag="RPW04_001124"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDX6295217.1"
                     /translation="MTNSELSKLDLEHIWHPCTQMSDHKDFPIIPIKRAKGAILTDFD
                     GNEYIDCVSSWWVNIFGHSNEYINQKLSEQTQNLEHVIMAGFSHDGIIKLSKRLIDLL
                     PYPLNRCFYGDNGSSAIEIALKMSYHKNIINGKNKPLFLNLKNSYHGETIAALSVGDV
                     ELYKKVYKNILIKTIVTPVPLSFKGREVSDDEALSGLKDILERYGNEISAFVLEPLIQ
                     CAGDMNMYSANFINKACVMAKKYDVDIIFDEIAVGFGRSGTMFALEQCDVVPDFLCLS
                     KGITGGYLPLSVVVTSENIYEQFYDTYESQKAFLHSHSYTGNALACACANATLDIFET
                     QNVIEKNIYLSKFIKSEFETLLKYDFVDNFRQTGMVLAFDLIGFEGKRMGYEIYKKAL
                     QKGLLLRPLANTIYFMPPYVITHDQISYTLSVIDNLLSELR"
     gene            complement(13370..14455)
                     /locus_tag="RPW04_001125"
     CDS             complement(13370..14455)
                     /locus_tag="RPW04_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDX6295218.1"
                     /translation="MFFSKNSSITETEYKNVVNENLKLQNENESLKSELKKLQDVSNE
                     TIKNIDAKETAPNLLIASYEDGMGFLQGTMEENLKMLENMNNLNNQTFLKTEKLREQT
                     TLVVSSMENIQQIGSGLQNDASSLNQSVISIVEIINLIKDISDQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVRKLAERTQKATQEVELNIGSLKQNSNTMIDMSHKFSTLSNDVM
                     QRIEIFRENIDSVNENTQNILNQSLNITNEINISNGKIDHINLKLSGYKAILYNKFED
                     IPDHTSCRFGKWFSSSVKDLLSNNKNVIEEVSEHHQNVHNGLLKVMDVVKNENNIKVG
                     IETLKDVENSSKYGFEILLKAIKAVRK"
     gene            complement(14660..15034)
                     /locus_tag="RPW04_001126"
     CDS             complement(14660..15034)
                     /locus_tag="RPW04_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004084273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HDX6295219.1"
                     /translation="MRLFSLIVLLASLAYCAVNLNTATKEELMALPGIGEINANAIIE
                     YRKHTEFKSIDEIKNIKGISNKRFNVIKADLATTGNTDINSIKSKANIKDKKSKISNK
                     DKVKNTNKTKSKTKSEKNSGEL"
BASE COUNT         4967 a         2853 c         2128 g         5324 t
ORIGIN      
        1 tttgttattg acaattattt tcataatgga attgaaagtc tacaatgagc taacttaaaa
       61 aacaataaaa ttttatatat tatttgaata ttgttatcat tatatttttt attatttaat
      121 aatttttttg atttattaaa taaattattt taactttaat gagtgtttta taaatgctta
      181 tttttaaatt taaactgtat atttcataat ttcactccat tgcaattata caaatggagt
      241 gacgcaagga ggagaaaatt aaaaattatt agctaattat cgttttagct gatttactgt
      301 ttgaagcatc tcgtctgctg ttgtaatcgc ttttgaattt gcctcatagg cgcgctgacc
      361 ggttataaga tcggtcattt cttcaactaa ttgcacgtta ctcatttcaa caaaaccttg
      421 ttttatttga ccaaaaccgt cagtaccgcc gtttcctata tttggagcac cgcttgcggc
      481 agtttctaag aaattattat cgcccatagc gtgaagtcca cttggattta tgaaatttgc
      541 aagctcaatc tgacctattt gagtcatctc ttgatttcct ggttgaagca cggataccgt
      601 gccatcgact cctacagaaa tttgagttgc gtctgctggt atattcatct ctggaagaag
      661 cctataacca tcactattaa cgatacttcc gtctccatca agcttaaatg caccatttct
      721 agtataagca gtagtaccat caggaagctg aatttggaaa aaaccgttac cggctataac
      781 catatctaga ttattccctg tttctttaaa atacccttga ccaaatactt tagttatagc
      841 agtaggacgc actccaagac ctacttccat accagttgga ctcatagttg tcgtacttgt
      901 cggtgttcct gcgtactgca tagtttggta catcaagtcg gcaaattctg cacgattttt
      961 cttatatcca attgtattta cgtttgctat attatgcgat gtggtatcta tctgggtttg
     1021 ctgagctacc attccagtag ctgccgtata aagtgagcgt atcatctatc tatccttaac
     1081 aaattaaact tttggtgaag caagtttagt aattgcttct tgatttatat cattcatatg
     1141 tgtcgacata actctttgat acatatcgac aagacgattt gtttctacta aatttaccat
     1201 ctcaataaca ggatttacgt ttgaaatttg agagtatcct tgagcgacgg aaccgctatt
     1261 ttctacatca tttaactcat ttaaatttgg aagcacaaag agattatcac cctctttttg
     1321 caaattccta atctctcttg gctgagctat aaaaaatcta ccaacatttt cgttatttga
     1381 gtaaatattt ccatctttat ctatagttac aggagcatct tgaggaattt gaatacctct
     1441 gacttcttct ggctgatttt cataattatt tggaagcact ctataacctt cttttgtcac
     1501 aatgtagcct tcattgtcca aatttaaagc accgtttttt gtaagtctta ctccatttgg
     1561 cgtatcaact aacaaaaata gatcgctttt tcctatagct acatccagag ggttatttgt
     1621 cattttaagt ccgccgacat taaagtcagt gtaaatttca ttaatctgcg gaactcgatc
     1681 aatggttcta tttagaaatt tagcggcgtc tcttgtatga ttttccaaag gtaagatatc
     1741 tctagtttct ttaaatattc gttcaaaatc agctataacg acatcatctc ttttatagcc
     1801 gattgtattt acatttgcaa ggttatttgt gattacatca agtctattaa actgcgtaac
     1861 catcgcgccc gtagcttgat aatagccgtt ttgcatatgt tctcctgcat taaatttaga
     1921 aataataaag caagttttgt tccatgtttt tgaaaagcat ttcaaaatct gcatttatat
     1981 agatttaatt attttttaga tataatcctt aattttaaca aaaacagata aataaatttt
     2041 aaggagcttt atatgagtgc agcaaaagag acttttgcac aaatagaaga gttatttaaa
     2101 gagaactcaa aaggttatgt tacttttgaa aagcttgtaa gattgtttga caaagctcca
     2161 acggttgcta ccataaaaaa agtcgaaact ctagccgaac tctataaaat acagctgata
     2221 agtgctgtag aagcggcaaa gataaaaaat atacaagaag ctaaaaaatc agaagaagac
     2281 aagctaaaaa tcatagatac cgccttagaa gaggaatttg atctaactag tgagaatgat
     2341 cttttagaat ggtcacgatc agacagcccc gtgagaatgt atcttagaga aatgggtcaa
     2401 atttcacttc taacaaaaga agaagaggta gaaatcagta aaaaaatcga gcttggagaa
     2461 gatatcatca tagatgcttt ttgctcagtg ccgtatctta ttgattttat tttagattac
     2521 aaagagcctc ttataaatag agaacgccga gttaaagagc tttttaaaag ttttgacgag
     2581 gaagagagcg aagaagagga agaagaaaca actgaagatg aatttgaata tgatgagaac
     2641 gaagaagata gcgctacagc aaaaaaacag ccaaaaaaac ttgacaaaag agcagaaaaa
     2701 gtaatagaaa gctttaaagc tcttgaaaaa gccaaaaaag aatggatgaa aatagtagca
     2761 aaacaaaata tatctatcga agaagaagcc gatctagtag caaagttaaa tttaactttt
     2821 aagaaaaaag ttttgaaaga taaattaatg gatcttggac ctacaagcaa acttataaat
     2881 gaaatagtaa aatccatgga aacggcttta aaaagcgatg atgactttga taaagagcta
     2941 aaacgccttg aatatcgtct tcctatgttt agtgccgaac tcaaaaaaaa ccatcaaggc
     3001 atactaaaag atataacaaa gctttcaaaa gaagatatca tatcaagagt tcctgaagca
     3061 actatggtat caacttatgt agagataaaa aagttatttc aaacaaaaga agctagcaaa
     3121 actggattta atctagaacc aaaagagcta aaaatagtat tagatcagat aaaacgcggt
     3181 aaaaatataa gtgacgatgc aaaagctaga atggcaaaat caaacctaag gctagtagtt
     3241 agtatagcta agcgatatac aaatcgcgga cttccgtttt tggatcttat tcaagaagga
     3301 aatattggtc ttatgaaagc ggttgataaa tttgaatata aaaaaggtta taaattttca
     3361 acatatgcta catggtggat aagacaagct ataagtcgtg ctatagctga tcaggccaga
     3421 acgatacgca taccgatcca tatgatagaa actataaacc gtataaataa aatcaataga
     3481 aaatatctac aagaagaagg aaaagagcca gatgtaagca tcatagcaag agaggtaggt
     3541 cttagtatag ataaagttaa gcaagttatc aaaattacca aagaacctat aagtcttgaa
     3601 gctccaatcg gcagtgaaga tgatggcaaa tacggcgatt ttgtagaaga taaaacaaat
     3661 cttagcccaa tggaacagat actaaaaggc gacttaaaag agcagataga tgaagtatta
     3721 gatcagctaa acgatcgtga aaaagcggtt ataagaatgc gttttggtct tttagaagat
     3781 gaaagcgata gaacattaga agagatagga aaagaactaa acgtgacaag agagcgtgtc
     3841 agacagatcg aaagctcagc cataaaaaaa ctaaaacatc caaaagtagg tagaaaactc
     3901 aaaaattaca tagagggaaa ttaaataaaa gcgatataga ttctagtcta tatcgcttta
     3961 tatcgtctaa agtactatcc taaaagtcca gatacttgac gttgaagtgt ttgcatattg
     4021 tgtgcagcta ccatagttga gctgtttacc aacaaattcg cattgttgta gttattcaca
     4081 ttatttgcta ggtcgttatt ttgcaattga gattcgctag ctttcgttga agtaaccgcg
     4141 gttaaactag catttattcc gcttataaga ccattttgta aacttccgat atcagttcta
     4201 agcgaattta cgctctttaa aaagtcactt atagtatttt gattagatat gtccaaagaa
     4261 ttaacatttg gagctgttaa gtttatgccg acttctccgt ttcctgtttg gaaactaagc
     4321 gaattaccaa aaatattttt accattaaag ctagcagagt ttaaagagtc ttgcatagat
     4381 gtttttagag catttgcttc tttatttaaa gcactaattt gctctggtcc atttattgca
     4441 ctatttgctc taacagaaag ctcatttagt ctatctgccc ctttgcctaa attttgcaaa
     4501 gtagcatcag ctatctgaag tactccaatg gcgtcatttg cattatttac accttgcgaa
     4561 atcgaacttg cactgctacg caaagagtct gctataagca aatttgaact atcggtaccg
     4621 cttaatgctc tttgagcaga tatattttca agtgctttac ttgcattttt ttgagcacta
     4681 tctaaatagt aattttggtt actatttgta taatcaccta ttttcataac tacctccttt
     4741 ggtagatttt atatatttta catcaataat attgaatttt gtcttaactc tcatatctca
     4801 cctttacaga aagctcatga gcgccgagac cttcggcttt tgctaggctc atacaggctt
     4861 ttccaagctc atttatagag cttttattca tagaaataat cgaacttttt ttcacaaaat
     4921 tactcactcc gagaggtgag aaaaatctcg cacttcctcc agtaggcaac gtgtgatttg
     4981 gacctgctaa ataatctccg atcgcttctg gagtataatg acctaaaaat atcgctccag
     5041 catgtttaat acgcgcaaga tactcaaacg cattattcgt ggcgatttct aagtgttcta
     5101 cagctaaatc attcatcaaa tctatgcact catccatatc ttttgctact atgatggcag
     5161 atttattatc tatactagct cttgctatct tttctctact taaagttggc aaaatcttat
     5221 aaatttcgtc tttgacgcta tttgcaaatt tgtcactaaa agttatcaaa aaactacttg
     5281 ctatttcatc atgctcagct tgactaagca aatctatagc aatatgatgt ggattagcac
     5341 tgtcacccgc tataatacct atttcgctag gtcctgctat catatctata tttacatctc
     5401 caaaaacaag ctttttagca gttgcaacat atatatttcc cggcccagtt ataacatcta
     5461 ctttttttat ggttttcgta ccataagcca tagccgcaat agcacttgct ccaccaactt
     5521 tataagcata ttctatacca agaagatgca tagcgccaag cagaagttca tttacatttc
     5581 ctcctacagc aggtgtgcaa accactatat ctttgactcc agcaactata gcaggggcag
     5641 cattcatcaa aagcgaacta ggatatgccg ctttacctcc tggtatataa agacctgctc
     5701 tatctacagg agttactttt tgacctaaaa tactcccgtt atcttcgaaa ctcagccatg
     5761 ttttttctag ctgtttttca tggtatattt ttatgcgttc atatgcgata cttagagatt
     5821 ttttaagatc tggatctaga ttattatatg cattttccat atcgctgcgc tctatttgca
     5881 gatcgccatt gactttccac ttatcaaatt taaaaatctg ctcgtttaaa gcttcatccc
     5941 catactcttt tatatcagag ataatgttat ttaccgtttc cattacattt tgcatatcta
     6001 aatttgaacg atttactaat ttatcaaaat cttgtttgaa attactatcg ttgctatata
     6061 aaattttcat aatctattct ctcctttatt taattatacc atatctagtt taaatttacg
     6121 tttgtaacgc tccaaaagac tttcatttcc tataattcca ccttgatgaa tatataaaat
     6181 tttattttta aattcagtta aattatagag taaactaagc catccaacac tatcgtaaag
     6241 cagctcaaac tcaacatttg ttgagtcttt aagctcttta taaatatcaa aaagctcacg
     6301 ctttaaattc ccaaaatgat atttttttgg cggatttaaa atattcaatt tcgaatcttt
     6361 atctaaattt aaaaccatag aagcaagata atctctatcg cccacgcaag gcgtagtata
     6421 tactttcatt tggcttaaat ttttagctaa atacgccgca ctagcaccag taccactagg
     6481 caaaaatata tcaaatttaa atccgatttg attagaaaaa tcctctataa gcttagcttg
     6541 agttttaaac ccatactcgg cttcgctcat agccacaccc tcaggaatta aaatatcgtc
     6601 gatatttttt aaatttgaag cgaaatcagc tctattttta ctttcataaa tcaccatgcc
     6661 atttcgcaaa gccaaagcca aatttccgct cggacgctct tttaaaaatc cgcttaaatg
     6721 atcggttaca tagataaact ctagtccttt catctttgca aacacgctaa ggctgtacat
     6781 tgcatttgac tgatttgagc cataagatat aatgcgttta aaaccgctta aatccgaatt
     6841 taaaaaatac tcaagctttc ttgctttatt tccattaaat tcgcctccga ttttgtcatc
     6901 tcttaaaatc caaaaactac gaccacgaaa atttacgcat tcaaaattat caaaattacc
     6961 ttgcattttg attgagaatt ttttctatct cttttatagt ggctttatcc gagatgctaa
     7021 atttaatctc aattctgcga gatgcttctt tatcctcaac tccgttttta taaacaagat
     7081 cgctaaaact tctaccgctt gctataaggt atttacctag ttcttcattt ttgtaaaatg
     7141 agtagataaa tttcattacc tcataagctc ttttttgcga taattcaaga ttataaagat
     7201 aactgccatc gctatcggta tgaccttcta taactattct atcaatgttc ggtcgtatct
     7261 catcgcttag aagcacatcg aaatacgcct ttaaagtacg tctcaaatca aatctagcgc
     7321 tatcttttaa cataaatgag tttgtatcaa acaaaataga tgacggaagc gaaactgagc
     7381 ctgaatttgc atcgatacgt atggaattac caagtttttg ctttagatcc gatatcactt
     7441 ttaattttat accacctaaa tcttttatgc gttcttttgt actatttaga tcagccaaaa
     7501 cactgttata ttcggattct ttttgagtta aagcaatttt taaatcactg atttgttcat
     7561 cttttaaatt tataatggag cttaactctt tattttcctc atttaccact ctaagagtac
     7621 tatttatatc tccaagctga atacttaatt cggcaagttt ctcattaaat agtgcattta
     7681 tctcagataa agctaaattg cgatctttag cattttgtaa tttttctatg aaatctttta
     7741 tcgctttttc ttttttgttc aactcatcac tactaaaagc aagtgcttct acttttttat
     7801 ttagatctat tcttaaagca tttaaatctg cttgtgtgag tacgtatttt actacgatag
     7861 ctccgatgag cagcacaaaa acaaacaaaa gtccagccat caaatcggcg taagatatcc
     7921 agaaattact tctttcgtct cttgaattat ctaatttcat cttgatttgc ttctgtattt
     7981 acttctagtt tttctagtgc gctgttagtc tcatcatcta tctcttgaat gctctttttt
     8041 agctcttcta tgattttgct gctctcatcc ccttttgctc cctcatcatc aaaaacctct
     8101 ctaaaagctt gcataccatc tatcatagca gctctaaatc cttctaaggc ttgtttttgt
     8161 ttctctaaaa tttcaacgct aaaaccctca agcgaatttt caaatttaga gatatttcca
     8221 ccaagatcat ttacggatct ctcaagttta gttattttat catcactagc actttgcaat
     8281 cttgtgtaat gctcactaaa tcttagttgc atctctttca aatttagatt aaacgaatta
     8341 agcacattaa ttatttcagc atgtactttt accatatctt tttgatctcg ctgagatttg
     8401 ataagcattc ccatagtatg ctttatatgt tcactgctta gttttacggc gtcttcttct
     8461 actttaagca tatcagaaaa attttggaat tttctttcaa ccgctttatt taactcttca
     8521 aaaaattcct gcttgctaac atgctcaaaa attacgctaa tcttctcgaa atttccgaga
     8581 ctttcttgca tatatctctg ctcgatctcc tcttttgtcc aaaaaaaagt acttgtagca
     8641 tttttttgcc tagctataag cttctcaaat ctactcatac caaatctctc aaaaaatatc
     8701 caccaaagag ccaaaaaaat accatatatc gacacataaa atgcagttcc aactccgctt
     8761 aaaagggtgg aaatctcagt ttcaagcgct tctgtgcttg atgagctaaa attcggcata
     8821 gatatagcta tacttaaaaa cgtaccaagt ataccaagca taggaaaaat tccagcacca
     8881 actgaggcgt aattatcatt tctaacgtca tttgaatatc tttttacaaa ctcatcaaaa
     8941 ctaccgtttg acttttgatc ttttcctatt atcaaaagac ttttcataat atagctttta
     9001 agatctcttt taaactcatc ttttctctgc tcaaataaac aacatccaag ctcaacacta
     9061 tgtctagcaa aaagcatcgc tataaaaagt ataactccca tcataactat agtatgaagc
     9121 tcaacgctaa aatttataat acgaaaatac ccaagcagaa atatagcgta tatcaaaaca
     9181 ggcagaaaaa ctattttaaa ataaactact ttactttgtc tcttaccgct atcaggtaga
     9241 agcaaatcac taaacgcatc atttttatcc ataaaaagtt ccttaaattt atgctaaatt
     9301 taaaaattta taaaattatt aaatttagca taaatttggc agcatacaag ccgccaaaat
     9361 ctaattttta ttcatacagt ttaaattatc aaaagcttca agaagtcttt ttatcatact
     9421 ctcttcacca gatcttaacc attttctagg atcgtagtat tttttatttg gcttgtcttc
     9481 tccctcggga tttcctatct gagattgcag atatccgtga tgagccgctt cgtactctct
     9541 cactccatcc caaaaagccc attgtgtgtc agtatcgata ttcattttaa caacaccata
     9601 acttacggcg tttttaatat cttttaactc actaccacta ccgccatgaa aaacgaaatt
     9661 taccggcttg tcgtcattta gagagaattt gtgcttaata aactcttgtg aatttttaag
     9721 aatttccgga cgaagaacaa catttcccgg cttatatact ccatgtacgt ttccaaaact
     9781 agctgctata ctaaatttat cgctaatttt gcctaactcg gaataagcat aagcaacttc
     9841 tgatggttga gtataaagaa gagagttatc tacaccagaa ttatcaacac cgtcctcttc
     9901 tcctccggta actccaagct cgatttcaag acttatatca agttcgctta aattttttaa
     9961 atactcttta caagtagaga tattttcctc taagctctct tcgctgagat caagcatatg
    10021 agaactaaaa agcggtcttc cgaatacttt tttatgttca cgactagcct ctataagacc
    10081 atctatccat ggcagtaact ttctagcggc atgatctgta tgcaaaacta ctggaatgcc
    10141 gtactctcta gcaagcagat gaacatgctt agcacctact atagcgccta aaatatctgg
    10201 cttaggacat gacttaccgg caaaaaaacc ggcgccgcca ttgctaaatt ggattataac
    10261 aggtgagttt gctctttttg cggcttctaa cactgcattt acggaattgc tgcctactac
    10321 atttactgct gggatagcga acccttcttg tttggcataa gcgtagagtt ttgtgatatc
    10381 atcaccactt agtacgcctg cttttacaat atccaaaact cccattttct acccttattt
    10441 atactctatt tttgcatctt tttttagatc gcttactttt ttttgcataa cagttctgaa
    10501 ctcttcactt ttcatttgat tttctatatt tgcttttgct ttatcaaatc caactgcgct
    10561 tttatctttc atatcttctt tcagtataac atgatatcca aactcgcttt taacaggttt
    10621 attagtaatt tcaccttttt taagtccaaa tgcggctttg ctaaatgatg ccaccatttg
    10681 agactcgcca aaccatccta actcaccgcc atttactgct gaacttttat ctatagattt
    10741 ctcttttgca atttctgaga attttttatc aagagcggca ccttttaaac catttaaact
    10801 ttttatgata tctgcggctt ctttttctgt ctcaactaaa atatgttttg cttttgcttg
    10861 agctggaact acaaatttat ctttattttg ctcgtaaaaa tcttttgctt tcttctcatc
    10921 cacttttata gcgtcaaact gttttttcat ccatatattt atagctacat tatcttcaag
    10981 ttctttaaca acttttttaa attcatcatc tttttctata ccgtcttttt tagcttggtc
    11041 caacataagc tttctttcta taactctatc caatagattt ttcttcatat cagctggtac
    11101 gttgcttgtt tctgatccgt gcggtcctaa tactggagct aaatcctcat ctgttatatt
    11161 ttgaccattt actgttgcca aaactgcggc atttaaacta actgcagcag ctaagcttaa
    11221 agctaaaatt acaccctttt tcatacttat cctttataaa ataaaattaa aaaacgttat
    11281 attatatcaa aaagccccgt taattttgtt taaaatttag tttttttagc taaaatccca
    11341 aaatgcgaac aaaaaaagat ataaaacaaa ttaaagaact atttttgcaa aactttagtg
    11401 gagctaaaag cgaacttaaa tttaaaaatc tctatgaact tctagtctgc gtgatgctat
    11461 cggctcaatg taccgacaaa agagtaaatt tgataactcc tgaacttttt aacgcctatc
    11521 cagatatcaa aagcttgtct gaagcaaatc ttgcctcact aaaattactg ataaattctt
    11581 gtagtttttt taataacaaa gcagcaaatt taataaaaat ggcaaaatcg gttatggatg
    11641 agtttggagg cgatattcca cttgaagaaa aagaactcat aaagttagca ggagtcggtc
    11701 aaaaaacggc tcacgttgtt ttaatagaac accaaaatgc aaatcttatg gcagtagaca
    11761 cacacgtttt tagagtatct catagactga atttaagtga tgcaaaaacc cctcaagcca
    11821 ctgaaatcga tcttactaaa gcattcaaaa cagaattaaa cactcttcat caagctatgg
    11881 ttttatttgg cagatatacc tgtaaagcct taaaaccaca atgcgaaaac tgctttttaa
    11941 aggagctttg cagctctgaa gacaaagtta tctaagctcg cttaataaat tatctataac
    12001 gctaagcgtg tagcttattt gatcatgagt tatcacgtat ggcggcataa aatatatagt
    12061 gtttgccaac gggcgaagca gtagaccttt ttgtaaagct tttttataaa tttcataacc
    12121 cattcgtttt ccctcaaaac cgatcagatc aaatgctaga accattcctg tttgtctaaa
    12181 attatcgaca aagtcatatt ttaacaatgt ttcaaattcg ctttttataa atttagaaag
    12241 atatatattt ttttctatca cgttttgcgt ttcaaaaata tctaaagtag cattagcaca
    12301 tgcgcacgcc aacgcatttc cagtatagct atgagagtgc aaaaaagcct tttggctctc
    12361 ataagtatca taaaactgct cgtaaatatt ctcgctcgta acaacaacgc taagaggtag
    12421 ataaccaccc gttatacctt tactaagaca caaaaaatca ggcaccacat cacactgttc
    12481 tagggcaaac atagttccgc ttctgccaaa accaacagca atttcatcaa atataatatc
    12541 aacatcatat ttttttgcca tcacacaagc cttatttata aaatttgcgc tatacatatt
    12601 catatctcct gcgcactgaa taagcggttc gagcacaaat gcggaaattt cattgccata
    12661 tctttctaaa atatctttta gaccgctaag cgcctcatcg tcgcttactt cacgaccttt
    12721 aaaactcaaa ggtacggggg tgactatggt ttttattaaa atatttttat atactttttt
    12781 atacaactct acatctccga cgctaagcgc cgctatagtt tcaccatgat atgagttttt
    12841 taaatttaaa aaaagaggtt tatttttgcc atttataata tttttatgat agctcatttt
    12901 aagagcaatt tctatagcgc tacttccatt atctccataa aaacatctat ttaaaggata
    12961 aggaagcaga tctatcaacc tttttgatag ttttataata ccatcgtgac taaatccagc
    13021 cattataaca tgttcaagat tttgagtttg ttcacttaat ttttgattta tatattcgtt
    13081 tgaatgacca aatatattta cccaccagct agaaacacag tctatatact cattaccatc
    13141 aaaatcagtt aaaatcgcgc cttttgcacg tttaataggt ataataggaa aatccttatg
    13201 atcactcatc tgagtgcaag gatgccatat atgttctaaa tcgagttttg ataattcact
    13261 atttgtcatg cgtaaccttt ttaatgaaat tatacaactc aaatttaaaa actatcttat
    13321 atttgtatta tcaattattt taaatttaaa aaggcttaaa aataaaatgc tattttctta
    13381 cggcttttat tgctttcaaa agtatctcaa acccatattt actcgagttt tctacatctt
    13441 ttaacgtttc aattccgact ttaatattgt tttcattttt aactacatcc ataactttca
    13501 aaagaccgtt atgaacattt tgatgatgct cggaaacttc ttctatcaca tttttattat
    13561 ttgacaacag atcttttacg ctactagaaa accatttacc aaacctacaa ctagtgtgat
    13621 ctggaatatc ttcaaatttg ttatataaaa tcgccttgta tccgcttaat tttaaattta
    13681 tatgatcaat cttgccatta ctgatattta tctcatttgt tatatttaaa gattgattga
    13741 gtatattttg agtattttca ttcacgctgt ctatattttc acggaaaatc tcaattcttt
    13801 gcataacatc attagataaa gtagaaaatt tatgactcat atcaatcatc gtatttgagt
    13861 tttgttttaa agaaccgata tttaattcaa cttcttgagt ggctttttgt gtgcgttcag
    13921 caagttttct aacttcatct gcgactactg caaatcctct tccgtgctct cctgctctag
    13981 ctgcttcaat agccgcatta agagcgagca aatttgtctg atcggatata tctttaatta
    14041 aatttataat ttcaactata gatatcacac tttgatttaa agaagaagca tcattttgaa
    14101 gtccgctacc tatttgctgg atattttcca tagatgaaac aaccaaagtc gtctgttctc
    14161 tgagtttttc agtttttaaa aatgtttgat tattcaaatt attcatattt tcaagcattt
    14221 taaggttttc ttccatggtt ccttgcaaaa atcccattcc atcttcataa ctagctataa
    14281 gaagattcgg tgccgtctct ttagcatcaa tatttttaat ggtttcgtta ctaacatctt
    14341 gcagtttttt aagttctgat tttaaacttt cgttctcatt ttgcaatttc agattttcat
    14401 ttactacatt tttgtactca gtttctgtta tagaactgtt tttagaaaaa aacataagta
    14461 tcctttaata aaattattct ataatcatac attgcagcta ctaaattata agtaaataaa
    14521 aaactttatt atatttttaa taagagggta ttaatagttt cttattttac cctccccaaa
    14581 aaaactctac tcaactccgc atttaaaaaa taaagcagta aatttaatag ttaatatagc
    14641 tgtaattatt agttacttat tacagttctc cactattttt ttcggattta gttttgcttt
    14701 tagttttatt agtatttttt actttatctt tatttgatat tttacttttt ttatctttta
    14761 tattagcttt tgatttaata ctattaatat ctgtattacc tgtagttgca agatcggctt
    14821 ttataacatt aaatctctta ttgcttatac ctttaatgtt ttttatctca tctatgcttt
    14881 taaattcagt atgttttcta tactctatta tagcattagc attaatttct cctataccag
    14941 gaagcgccat aagctcctct ttagtagcag tatttaaatt tactgcacaa taagccaaac
    15001 tagcaagtaa aactattaaa ctaaataacc tcataataaa ctccttaaat ataatatatt
    15061 tcattataag ctagcaacct aaaaagcaaa cttaaatgta atgcaaatat gataaaaata
    15121 tatataaaga gtataatggt aacactacct aataatttaa taaaatttat ctatataaat
    15181 atatgatata atataaaata ataaactaac tatattaaat ttaattataa agatcttatc
    15241 aacccgacaa caattagcca aattcataaa ta
//
LOCUS       DAPPKW010000042        14697 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.042, whole genome shotgun sequence.
ACCESSION   DAPPKW010000042 DAPPKW010000000
VERSION     DAPPKW010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14697)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14697)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14697
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.042"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(105..1124)
                     /gene="queA"
                     /locus_tag="RPW04_001127"
     CDS             complement(105..1124)
                     /gene="queA"
                     /locus_tag="RPW04_001127"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDX6295220.1"
                     /translation="MSDIFSLSSYDYKLPQDLIATAPTMPKEEARLLVYDRQKDSVFH
                     LKFKNLSEILPECAIIFNDTKVIKARIYGRKDSGAEIQMLLNQPLQNSLFSCYIRGKV
                     KVGTKLKFDLGVEAEVLELKDDSSRIVKFKKNEQILNTSEIYNILSHIGHVPLPPYIK
                     REDTPDDEIWYQSIFAKNEGAVAAPTASLHFNDQMLDDLNKTHDISYITLHVGAGTFK
                     GVEHCDIREHKMHSEFYCISKKAKNIIDSDIKLLGVGTTVTRCIEYYYRTKQPKGFCD
                     LFLHPDNKPLRQDFLLTNFHLPKSTLIMLVASFIGLEKTMEIYKQAVENRYKFYSYGD
                     GMLII"
     gene            complement(1121..1876)
                     /gene="tatC"
                     /locus_tag="RPW04_001128"
     CDS             complement(1121..1876)
                     /gene="tatC"
                     /locus_tag="RPW04_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HDX6295221.1"
                     /translation="MFEDLRPHLIELRKRLIISAFAIIVCFVVCFNFWNPILAYMSAP
                     LKAVLPDGSNIIFTQVAEPFFTAMKVAFFAGLLLALPVIFWQFWLFVAPGLYENEKKY
                     VIPFVISATFMFLVGAAFCYYFVVPVGFHFLINFGGELFQALPSIGDYVGFFTKLIVA
                     FGISFELPVVTFFLAKLGMIDDKALKGFFRYAVVIIFIFAAIMTPPDVLSQFLLAIPL
                     IALYALSIFIAKMVNPAKKDEEEDMQENREEEQ"
     gene            complement(1876..2331)
                     /gene="tatB"
                     /locus_tag="RPW04_001129"
     CDS             complement(1876..2331)
                     /gene="tatB"
                     /locus_tag="RPW04_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HDX6295222.1"
                     /translation="MFGMSLPEIIIIAVIAVIFLGPDKLPDAMVKIAKFFKLFKQTVN
                     SAKSTFEQEVKIAELKEDAKKYKENITNAASSVRKKLTFEELDELKSTVSGTKNSINE
                     SLADIKKEITKDPLTLLNNDPLNNETLNEQPSKPSPNLNLENKEIKKEA"
     gene            complement(2387..3427)
                     /locus_tag="RPW04_001130"
     CDS             complement(2387..3427)
                     /locus_tag="RPW04_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coproporphyrinogen III oxidase family protein"
                     /protein_id="HDX6295223.1"
                     /translation="MQIYIHIPFCESKCPYCAFGSHSDKFSLTKRYFSALKSEIKESI
                     LNLNKKISTIFIGGGTPSSVEAGFYSDIFEIIKPKLAKNCEITTEANPNSASLKWLLE
                     MRELGVNRVSFGAQSFNEKKLKLLGRIHSKNGISKAVQNAKIAKFNNINIDLMYGTKL
                     DTKKLILTEVENIFNLNISHVSAYSLMLEENTPFFERINLKKDSPALAKFMIQELENI
                     GHKQYEISNFGKPCLHNIGYWKQKDYLGFGAYAVGTIGEKRFYSTPNLEAYIKNPLEK
                     SVENLSKNDKLNEHIFLGLRSIVGVKISNLNDLQLQKANILAKKNRIYIKNGRIFNKN
                     FLLSDEIYLFLT"
     gene            3542..4012
                     /locus_tag="RPW04_001131"
     CDS             3542..4012
                     /locus_tag="RPW04_001131"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HDX6295224.1"
                     /translation="MDKEKNYRPNVAAVILSPTYPLECKILIAQRYDIIGAWQFPQGG
                     IDKGEVPRDALLRELGEEIGTSDVEILCEHPEWLSYDFPQNIAKKMAPYDGQTQKYFL
                     VRLKPMAKINLNTKNPEFNDYRFVMQNEVLESVNHFKKNVYNKVLKYFKEEGYI"
     gene            4012..5226
                     /locus_tag="RPW04_001132"
     CDS             4012..5226
                     /locus_tag="RPW04_001132"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HDX6295225.1"
                     /translation="MLIVQKYGGTSVGTLERIEEVAKRVIETKKAGNDVVVVVSAMSG
                     VTNKLIEYAEYFTKNEPCSADMDMLLSSGERVTSALLSIALNEKGYSSIAMSGRAAGI
                     LTDSTYTKARIISIDNSNMKKAISEGKIVVLAGFQGVDANGYVTTLGRGGSDLSAVAI
                     AGALNADLCEIYTDVDGVYTTDPRIEPKAKKLEKISYDEMLELASMGAKVLQNRSVEL
                     AKKLNVSLVTRSSFNNNEGTLITGEANMENNSMEQALISGIALDKNQARVTMRGVVDK
                     PGVAAGIFKKLAEKNINVDMIIQNTSHEDGTTSLGFTVPQNEMEAARSVVDGVAKSVE
                     IDSDVVKVSVVGVGMKSHSGVASLAFSTLANESINIQMISTSEIKISMIVASKYGELA
                     VRALHKAYELDN"
     gene            5226..5768
                     /locus_tag="RPW04_001133"
     CDS             5226..5768
                     /locus_tag="RPW04_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004292099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HobA family DNA replication regulator"
                     /protein_id="HDX6295226.1"
                     /translation="MTDFIKWSLEAIRDEGSLMSWMEERRVEWAPLLASRVKYLFEGV
                     TFIVISDEERDWFESYFLRNINRRDNARPILPFVSLKSLYPSFNEINSKEEISLLEDM
                     LSIAFPNGFIYFYVGKSSSKLSLIAKSKDDSYMWLFDEQAQNSFYLSSNDDLLDIKLL
                     SLFRLFNKSIDAVLFGKVSL"
     gene            5777..6394
                     /locus_tag="RPW04_001134"
     CDS             5777..6394
                     /locus_tag="RPW04_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDX6295227.1"
                     /translation="MYSKIIISSDFSSVKDELIRDIKPNFLRIFEYDNFLVDDAKEII
                     NEAYIAEIEEKVIVIMAFKFGIEPQNALLKILEEPPKNSIFILVAPSKNSLLPTIRSR
                     LMMENRKLNLQRAATGLNLKKLELKDIYNFIEQSISLEKVDKLNKTSLLNLVKSIVCE
                     AIDSGASFSVEDYRYFYKIYRLVDLNAKSTQVLTPLLLLIMQRMR"
     gene            6391..7533
                     /gene="folP"
                     /locus_tag="RPW04_001135"
     CDS             6391..7533
                     /gene="folP"
                     /locus_tag="RPW04_001135"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HDX6295228.1"
                     /translation="MRVFKIDANSGFESICYTIKPQKAGLNIMKQKSHLNFFYIKDIK
                     RAAANILKQDALSIGAELVSSKETVLGGDELENALLIANDKQISYLAKKELMQDFGLK
                     TLAKFISKEFRKPDNPLIMGVLNFNEDSFNPSSRTNIHEAVFKIEKMINDGASYVDIG
                     MVSSRPGSQYIGSEHEFNRVKPVIDEIYSNKLHEKVKLSLDSFDKKCLRYALERGFSM
                     INDISADCSLATLAKEFGASYCLMHKKGDPQTMQQNVCDCEILSEVDDFFSKKLEILE
                     SLGAKDIYLDVGIGFGKTPRDNMILIKHLEHFLHFGYPLFVGASRKSVIDFYSKSSVE
                     QRLAGTLFLHLNAFYNGASIVRVHDVGEHAQMFKLALAYRDLDIEG"
     gene            7534..9471
                     /gene="ligA"
                     /locus_tag="RPW04_001136"
     CDS             7534..9471
                     /gene="ligA"
                     /locus_tag="RPW04_001136"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDX6295229.1"
                     /translation="MDKNDYLKAVDSLNLWAKAYYTDDSPMASDDEYDKLYNAVVQFE
                     KENPDLKLSYSPTNRIGGEILDEFKKISHIEKMWSMEDIFSDSELVAWISRGDKTDCE
                     FFAEPKFDGASLNLLYENGNLISAATRGDGSVGEDVTNNAKVISSVPLQIDYKDKIEI
                     RGEVVITKDDFELINIERSKNSEPPLANPRNAAAGSLRQLDNGIVKQRKLKFYPWGVG
                     ENSLKFNKHSQIMDFVRSLGFLHDNFCKVIRGIDELKIAYKELLSVRELKPILMDGMV
                     IRVNDLSKANQLGYTVKFPKFMVAYKFPATEKTARLIDILLQVGRTGVVTPVGLLDGV
                     LIDGAFIKNVTLHNFDEIDRLNLMKNDFVTVIRSGDVIPKITGVFKDRRDGSQSEIIR
                     PKICPECGNELLDEGVFIKCQNLTCKARVVSSITYFASKKCMNIDGLGDAIVELLYQK
                     NIIKDIADIYRLDELSFIGLEGFKTKKISNLLSAINNSKTPNLDKFIASLGIEHIGEV
                     AAKKIANNYGDRWLELTLEELLALDGFGEAMALSYLEFMRVNLEKIKELLEFITPKMQ
                     NLELKTNIFSGKTVVITGTLSRSRDEFKAELESYGAKVSSSVSKKTDFVLYGNEAGSK
                     LEKANELGVRAIDESEYESLK"
     gene            9468..10169
                     /locus_tag="RPW04_001137"
     CDS             9468..10169
                     /locus_tag="RPW04_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HDX6295230.1"
                     /translation="MRADVFVSATLGISRNQASELIKSKNITLNENMIDKPSLEVKGD
                     ERVVANDNIYVSRAALKLKGFLGELKPCFLNLNALDVGSSTGGFVQILLENGVKSVTA
                     LDVGSAQLSTVLRNDKRVIVQENTDIRKFNSSKFDLVTVDVSFISILQILNDIDRLAK
                     RDIILLFKPQFEVGANAKRSKKGVVKDKKLINLSKAKFEIAASELGWSLKKSKESVIT
                     GKEGNLELFYYYVKR"
     gene            10138..11019
                     /locus_tag="RPW04_001138"
     CDS             10138..11019
                     /locus_tag="RPW04_001138"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HDX6295231.1"
                     /translation="MSYFTTMSKDKIEAIAIGHFDGIHKGHKELIKKLGKNGALVVVE
                     SDKACITPGDRREEYSGVPCFYYHLKDIVELRGDEFLKLLQNEFPNLKRIVVGYDFKF
                     GKDRAWDKHDLKNLFHGEVLVVNEFSFDGLGVHSSAIRRFLRDGDIYRANRLLGREYS
                     IKGRVISGQGLGKKSIYPTLNLVVEPYITPKNGVYATRTKIGDDTYSSITFIGNRFTT
                     DGAFSIESHLFDVDLKDNIYEVRVCFIERIRDNFKFNSLDELKTQISKDMLIARNVAK
                     CCDLSLQDDYIHARDLV"
     gene            11016..11720
                     /gene="cmoA"
                     /locus_tag="RPW04_001139"
     CDS             11016..11720
                     /gene="cmoA"
                     /locus_tag="RPW04_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HDX6295232.1"
                     /translation="MRDEVFKRPIKKQFEFDESVVSVFDDMVSRSVPYYCDVQALISL
                     ILSKNLSPNAKVFDLGCSTATTLLEIFKLRNDLSLNGVDSSEAMIKTARNRSLAYLAN
                     LNLYVSDILDFDFSGSDAVILNYTLQFIRPIKREEFIKKIYSNLKSGGIFIFSEKLVY
                     EDKKLTLDMIEIYENYKHSQGYSKFEIAQKRQALENILIPYSENENKELCLNAGFKSV
                     ETIFKWANFATFIAFK"
     gene            11792..12838
                     /locus_tag="RPW04_001140"
     CDS             11792..12838
                     /locus_tag="RPW04_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDX6295233.1"
                     /translation="MKILKTFFSATIVFGALNAADIDANLIEAAKKEGVINSVAMPDT
                     WANWKDTWDDLARLYSLKHSDTDMSSAQEIAKFKAEKKNATADIGDVGQSFGRIAILE
                     GVSEPFKTSYWDQIPDWAKDKDGHWMLAYTGTIAFIINNQTVKNPPKTWKDLKNATYK
                     ITVGDVSVAAQAVSGVLAANYALGGDERDLSPALNFFAELAKQGRLAMVDPSIANLEK
                     GEIDVAIIWDFNALNYRDKVGKDRYLVTIPQDGSIVSGYTTIINKYAKNINAAKLARE
                     YILSDQGQINLAKGYARPIRNAYIELPQDIKDKLIPENEYKNAKPIKNPEVWEKTAKK
                     LPRLWQENVIINIK"
     gene            12849..13584
                     /locus_tag="RPW04_001141"
                     /pseudo
     CDS             12849..13584
                     /locus_tag="RPW04_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344146.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
     gene            13741..14544
                     /locus_tag="RPW04_001142"
     CDS             13741..14544
                     /locus_tag="RPW04_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HDX6295234.1"
                     /translation="MSKVVLVILDGLEYSTAQQCMGGLLALCNANMGKIYKMKSELPS
                     ISRPLYECILTGVKPALSGILNNYCKPFSSNKSIFEYAKLANLKAGAAAYYWISELYN
                     KTLFDRVKDRIIINEQSLNIPYGIFYYEDDYNDSHLFSDAECLRVKFDLDFTLFHSMN
                     IDDIGHKFSHDSKEYRNAARKVDTILSSLVLKWLEEGVNVIITSDHGMNNDGTHGGNL
                     DIERDVAFFVFGDKFSFARVEVEQSGICGLVCEILGVDHDKSFAKELLK"
     gene            14541..>14697
                     /locus_tag="RPW04_001143"
     CDS             14541..>14697
                     /locus_tag="RPW04_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDX6295235.1"
                     /translation="MNREKFIATLFLIPFFVVFFMFIAAPFLWILINSFIDQNGKWGF
                     DNYKEIFD"
BASE COUNT         5052 a         2023 c         2862 g         4760 t
ORIGIN      
        1 aaatttgaat tactatttac agaagttttt tcttctttgg cttgcgccgt aaatagagtt
       61 aaaacaagta gcaaaattcc tataaaaagc ttcataaata tctcctaaat tataagcata
      121 ccgtcgccat aagagtaaaa tttatatcta ttttctacgg cttgtttata aatttccatc
      181 gttttttcaa gtcctataaa acttgctacg agcattatca gtgttgattt cggtagatga
      241 aagtttgtaa gtaaaaaatc ctgtctcaaa ggcttgttgt caggatgtaa aaatagatcg
      301 caaaatcctt ttggctgttt ggttctatag tagtactcga tgcatctagt aacagtagtt
      361 ccgactccta gaagctttat atctgaatct ataatgtttt ttgctttttt ggatatacag
      421 taaaattcgc tgtgcatttt atgctctctt atatcgcagt gctcaactcc tttaaacgta
      481 cctgcgccta cgtgtagagt gatatatgag atatcatgag ttttgtttag atcatcaagc
      541 atttgatcgt taaaatgtaa gcttgcggtt ggagctgcga cagcgccttc atttttagca
      601 aatatgcttt gataccagat ctcatcatcg ggagtatctt ctctttttat atacggagga
      661 agcggcacgt gacctatatg agataagata ttataaattt cacttgtatt taaaatttgc
      721 tcattttttt taaattttac tatacggcta gagtcgtctt ttagttctaa aacttcagct
      781 tcaactccaa gatcaaattt aagtttagtt ccaaccttta ctttacctct tatataacag
      841 ctaaaaagtg agttttgaag cggctgattt aaaagcattt gtatttctgc accgctatct
      901 ttacgaccgt aaattctagc ttttattacc tttgtatcat taaaaattat tgcacattcg
      961 ggtaaaattt cgcttagatt tttaaattta agatgaaata cgctatcttt ttgtctatca
     1021 taaaccaaaa gtcttgcttc ttcttttggc atagtcggag cggtggctat aagatcttga
     1081 ggaagtttat aatcataact tgaaaggctg aatatatcgc tcattgctct tcttctcgat
     1141 tttcttgcat atcttcttct tcatcttttt ttgccggatt taccattttt gctataaata
     1201 tagaaagagc atataacgct ataagcggaa tagctagtaa aaattgacta agtacatcag
     1261 ggggagtcat aatagcagca aatataaata taattactac cgcatatcta aaaaatcctt
     1321 ttagcgcttt atcatcgatc atgcctagct ttgctaaaaa aaatgtaaca actggaagtt
     1381 caaagcttat accgaaagct actattagtt tcgtaaaaaa tcctacgtag tctcctatgc
     1441 taggaagcgc ttgaaaaagc tctccgccaa aatttataag aaaatgaaat cccaccggaa
     1501 ctacaaaata gtaacaaaaa gcagctccta ctaaaaacat aaaagtagcg cttataacaa
     1561 acggaataac gtattttttc tcattttcat aaagtcctgg tgccacaaat agccaaaatt
     1621 gccaaaatat tactggcaat gctaataaaa gtccggcaaa aaatgcaact ttcatagcgg
     1681 tgaaaaatgg ctccgcaact tgagtaaaga ttatgttgct tccatctggc aataccgctt
     1741 ttaaaggagc gctcatataa gccaagatcg gattccagaa gttaaaacat actacaaaac
     1801 atactataat agcaaatgca ctgatgataa gtcgctttct aagttctatt aaatgtggtc
     1861 ttaaatcttc aaacattatg cctctttttt tatttcttta ttttctaaat ttaaatttgg
     1921 tgatggtttg ctcggctgtt catttaaagt ttcgttattt aatggatcat tatttaacag
     1981 tgttaaagga tctttagtta tctctttttt gatatctgct aaactctcgt ttatgctgtt
     2041 ttttgtgcca ctaaccgtac tttttagctc atcaagctct tcaaaagtca gctttttacg
     2101 cacactgcta gctgcgtttg ttatattttc tttgtatttt tttgcatctt ctttgagttc
     2161 ggctatctta acttcttgct caaatgtact ctttgcgcta tttacagtct gcttaaagag
     2221 tttgaaaaac ttagctattt ttaccatagc atcgggcaat ttatcaggac ctaaaaaaat
     2281 aaccgcaata accgctatta tgattatttc tggcaggctc attccaaaca tagatgttcc
     2341 taattataga tttttatata acattttaca atcttttttc taattgctag gttaagaata
     2401 aataaatttc atcactaagt aagaagtttt tattaaaaat gcgtccattt tttatgtaaa
     2461 ttctattttt cttagctaaa atatttgctt tttggagttg taaatcattt aaatttgaaa
     2521 ttttaactcc gactatactt ctaagaccaa gaaaaatatg ctcatttaat ttatcgtttt
     2581 tacttaaatt ctctacggat ttttcgagcg gatttttgat gtaagcttct aaattcggtg
     2641 tagaataaaa tcgtttttct cctatagttc ctactgcgta agctccaaat ccaagataat
     2701 ctttttgctt ccagtaacct atattgtgca agcaaggttt tccgaaattt gatatttcat
     2761 actgtttgtg acctatattt tccaactctt gtatcataaa tttagctaat gcaggactgt
     2821 cttttttgag atttatacgt tcaaaaaacg gagtattttc ctctagcatt aaagaatatg
     2881 ctgaaacgtg agatatattt aggttaaaaa tattttcaac ttcggttaaa ataagttttt
     2941 tcgtatcaag ttttgttccg tacattagat ctatatttat gttgttaaat ttagctattt
     3001 tagcgttttg cacagctttt gaaataccgt tttttgaatg gattctacca agtagcttaa
     3061 gctttttttc attgaaactt tgagctccga aacttactct atttactcca agctctctca
     3121 tttccaaaag ccattttaag cttgctgagt tcgggtttgc ttcggttgtt atttcacagt
     3181 ttttagcaag tttcggtttt ataatttcaa aaatatccga ataaaatcca gcctcgacac
     3241 tactaggcgt accgccgcct ataaaaatcg tacttatttt tttgtttaaa tttaaaatag
     3301 attcttttat ttcactttta agcgcactaa aatagcgctt tgttaaacta aatttatcgc
     3361 tgtgagaacc aaaagcgcag taagggcatt ttgattcgca aaatggtata tgtatgtaga
     3421 tttgcaaagt tcctctttca ttaaaagaaa aattgtataa aaatatctct taaaactctt
     3481 ttatttatta aactttaaac gcttttaggg tagcattttt tttaaaattt taggaaaaaa
     3541 aatggataaa gagaaaaact acagaccaaa tgtagcagca gttatcctat ctccaactta
     3601 tccgcttgag tgtaaaattc ttatagctca aagatatgat ataatcggtg catggcagtt
     3661 tcctcaaggt ggaattgaca aaggagaagt cccaagagat gcacttttaa gagaactagg
     3721 agaagagata ggcactagtg atgttgagat tttgtgtgaa catccggaat ggcttagtta
     3781 tgattttcca caaaatatag ctaaaaaaat ggctccatac gatggtcaaa cgcagaaata
     3841 ttttttagta agacttaagc cgatggcaaa gataaactta aatactaaaa atccagagtt
     3901 taatgattat aggtttgtta tgcaaaatga agttttagaa agtgttaatc atttcaaaaa
     3961 aaatgtatat aataaggtac tgaaatattt taaagaggag gggtatattt aatgcttata
     4021 gttcaaaaat acggcggaac aagtgttggt acgcttgaga ggattgaaga agtagcaaaa
     4081 agggtgatag agacaaaaaa agctggaaat gacgtagtag tcgtagtttc agctatgagc
     4141 ggagtgacta ataaattaat tgaatatgct gagtatttta ccaaaaatga gccatgctcc
     4201 gctgatatgg atatgctatt aagctcagga gaaagagtta ctagcgcact tctatctata
     4261 gcattaaatg aaaaagggta ttcttctata gctatgagcg gtagagcagc cggtatactt
     4321 actgatagta cttatacaaa agctagaatt ataagtatag ataattcaaa tatgaaaaaa
     4381 gccataagcg agggtaaaat cgtagtttta gcaggttttc aaggcgttga tgcaaacgga
     4441 tacgttacta ctttagggcg tggaggaagt gatcttagtg ccgttgctat agcaggagct
     4501 ttgaatgctg atttgtgtga aatttatacc gatgtagacg gagtatatac aaccgatcct
     4561 cgtatagaac caaaagctaa aaagcttgaa aagattagtt atgatgagat gctagaactt
     4621 gccagtatgg gcgcaaaagt actgcaaaac agaagcgttg agctagctaa aaaattaaat
     4681 gtaagtttag ttactagaag tagttttaat aataatgaag gaacattaat aacaggagaa
     4741 gcaaatatgg aaaataacag tatggaacaa gcattaatca gcggcatcgc tttggataaa
     4801 aatcaagcaa gagtaactat gcgcggtgtt gtcgataagc caggagttgc agctggaatt
     4861 tttaagaaac ttgctgaaaa aaatataaat gtagatatga taattcaaaa cacgagtcat
     4921 gaagacggca ctacaagtct cggttttaca gtgccgcaaa atgagatgga agcagctaga
     4981 agcgttgtag atggcgtagc aaaatctgtt gaaatagaca gcgacgtagt aaaggtaagc
     5041 gttgtcggag taggtatgaa aagtcatagc ggcgtagcaa gtcttgcttt ttcaactttg
     5101 gctaatgaga gtataaatat acagatgatc tctactagtg aaataaaaat atctatgata
     5161 gtggcatcaa aatatggaga gttagcagtt agagcgcttc ataaagctta tgagctagat
     5221 aactaatgac tgattttatc aagtggagct tagaagctat aagagatgaa ggctctctta
     5281 tgagctggat ggaagaaaga cgcgtggagt gggctccact gcttgcttct agagtaaaat
     5341 atctatttga aggcgttaca tttatagtta ttagcgatga ggaaagagat tggttcgaga
     5401 gctatttttt aagaaatatt aatcgtagag ataatgctag gccgatactt ccttttgtat
     5461 ctttaaaatc gctttatccg tcatttaatg agataaactc taaagaggag ataagtcttt
     5521 tagaagatat gttaagtatc gcttttccaa atggatttat atatttttat gtaggaaagt
     5581 caagttcaaa attatctttg atagcaaaaa gcaaggatga tagctatatg tggctttttg
     5641 atgagcaagc gcaaaatagc ttttatctaa gctcgaatga tgatttgctt gatattaaac
     5701 ttctatcttt atttagactt tttaataaaa gtatagatgc tgttttgttt ggtaaagtaa
     5761 gtttatagga gaagttttgt atagtaaaat cataatctca agcgatttta gtagcgttaa
     5821 agatgagctt ataagagata ttaagcctaa ttttttacgt atttttgaat atgataattt
     5881 tttggtcgat gatgcaaaag agattataaa tgaagcttat atagctgaga tagaagaaaa
     5941 agttatagtg ataatggctt ttaaatttgg gattgagccg caaaatgcac ttctaaagat
     6001 actagaagaa cctccaaaaa atagcatttt tatccttgta gcgccgtcta aaaatagtct
     6061 tttgcctact attcgttcaa gacttatgat ggaaaataga aaattaaatt tacaaagagc
     6121 ggctactggt ttaaatttaa aaaaactaga gcttaaagat atatataatt ttatagaaca
     6181 aagtatatct ttagaaaaag tcgataaact aaataaaact tctttgctaa acttagtaaa
     6241 gtcgatagtt tgcgaagcta tcgattctgg agcttctttt agtgttgagg attatagata
     6301 tttttataaa atttaccgtt tagttgatct aaatgcaaaa tcgactcagg ttttaacgcc
     6361 gcttttatta ctgattatgc aaaggatgcg atgagagttt ttaagataga tgcaaatagt
     6421 ggatttgaaa gtatttgcta taccataaag cctcaaaagg cagggctaaa tatcatgaaa
     6481 caaaagagcc atttgaattt tttttatata aaagatataa aaagagccgc agcaaatatc
     6541 ttaaaacaag acgctttgag tataggtgcc gagttggtta gttcaaaaga aacggtttta
     6601 ggcggagatg aacttgaaaa tgcacttctt atagcaaatg ataagcaaat ttcttattta
     6661 gctaaaaaag agttaatgca agattttgga ctgaaaactt tagctaaatt tatctcaaaa
     6721 gagttcagaa aaccggataa tcctcttatt atgggtgttt taaattttaa tgaagatagt
     6781 tttaatccga gtagtagaac aaatatacat gaggctgttt ttaagataga aaaaatgata
     6841 aatgatggcg ccagctatgt tgatatcggt atggtaagtt ctcgtccagg aagtcaatac
     6901 ataggtagcg aacatgaatt taatagagtt aagccggtta tagatgaaat ttattcaaat
     6961 aaattgcacg aaaaggtaaa gttgagtctc gatagttttg ataaaaagtg tcttaggtac
     7021 gctttggagc gtggatttag tatgataaac gatataagtg cagactgttc gttagccacg
     7081 cttgcaaagg aatttggcgc tagttattgt cttatgcata aaaaaggcga tccgcaaact
     7141 atgcaacaaa atgtttgcga ctgtgaaatt ttaagtgaag ttgatgattt tttcagtaaa
     7201 aagctggaaa ttttagaaag tttgggagca aaagatatat atcttgatgt tggaatagga
     7261 tttggaaaaa cgcctagaga taatatgatt ttgataaagc atttggagca tttcttgcat
     7321 tttggttatc ctctttttgt cggagctagc aggaaatcgg ttattgattt ttactctaag
     7381 agcagcgttg agcagagatt agccggaacg ctatttttgc atcttaatgc gttttataac
     7441 ggagctagta tagtgcgcgt tcatgatgtt ggcgaacatg cgcagatgtt taaattagcg
     7501 cttgcttata gagatttaga tattgagggt tagatggata aaaatgatta tttaaaagca
     7561 gtcgatagtt taaatttatg ggcaaaggct tattataccg atgattctcc gatggcgtca
     7621 gatgatgagt atgacaagct ttataacgcc gtagttcagt ttgaaaaaga aaatccggat
     7681 ttaaaactct cttactctcc tacaaataga atcggtggag agattttaga tgagtttaag
     7741 aagatatctc atatagaaaa aatgtggtcc atggaggata tatttagtga tagcgagctt
     7801 gttgcttgga tttctagagg agataaaacg gattgcgagt tttttgccga acctaaattt
     7861 gatggagcta gtttaaattt actttatgaa aacggaaatc ttataagcgc tgctacaaga
     7921 ggcgatggaa gcgttggaga agacgtcacg aacaatgcaa aggtcataag ctcagtaccg
     7981 ttgcaaatag actataaaga taaaatagaa ataagaggcg aagtcgtcat aacaaaagat
     8041 gattttgaat tgataaatat tgagcgtagc aaaaattcag aaccgccttt agcaaatccg
     8101 agaaacgcag cagccggaag ccttagacag cttgataatg gtatagtaaa acagagaaaa
     8161 cttaagtttt atccatgggg agtcggagag aactctttga aatttaataa acattctcag
     8221 attatggatt ttgtaagaag tcttggtttt ttacatgata atttttgtaa agtgatcaga
     8281 ggtatcgacg agttaaaaat tgcttataaa gagcttttaa gtgtaagaga gcttaagcct
     8341 attttgatgg acggaatggt aatacgagta aatgatttat caaaagctaa tcagcttggt
     8401 tataccgtta aatttccaaa atttatggta gcttataaat ttcctgccac tgaaaagact
     8461 gcaagattga tagatatatt gctgcaagta ggaagaacag gagtcgtaac tccagtggga
     8521 ttgcttgatg gagttttgat agatggtgcg tttataaaaa atgtcacgct tcataatttt
     8581 gatgagatag atagattaaa tttaatgaaa aatgactttg ttaccgtgat aagaagcgga
     8641 gatgtcatac ctaagattac tggagtattt aaagatagaa gagacggtag tcaaagtgag
     8701 ataattcgcc caaaaatttg ccctgaatgc ggaaacgagc ttttagacga aggtgttttt
     8761 ataaagtgtc aaaatctaac ttgcaaagct agagtcgtga gttctattac ctatttcgca
     8821 tctaaaaaat gtatgaatat agacggtctt ggtgatgcta tagtagagct tttatatcaa
     8881 aaaaatatta ttaaagatat cgctgatatt tataggcttg atgagcttag ttttataggt
     8941 cttgagggat ttaaaactaa aaaaatttca aatttattat cggctattaa taactctaaa
     9001 actccaaatt tagataaatt tatagcgtct ttaggcatcg aacatatagg cgaagttgcc
     9061 gctaaaaaaa tagcaaataa ttatggagat aggtggcttg aattaactct tgaagagctt
     9121 ttagctttag acggatttgg tgaagctatg gctcttagtt atcttgagtt tatgagagta
     9181 aatttagaaa aaataaaaga acttttagaa tttatcactc caaaaatgca aaatttagag
     9241 ttaaaaacaa atatattttc aggaaaaaca gtagttataa caggtacttt gtctcgctct
     9301 agagatgagt tcaaagcaga actagaaagt tatggtgcta aagtatctag ctcggtgtct
     9361 aaaaaaacgg atttcgtatt atatggaaat gaagccggaa gtaagctaga aaaagcaaat
     9421 gaattaggcg taagagcaat agatgagagt gagtatgaaa gtttaaaatg agagccgatg
     9481 ttttcgtatc cgcaactctt ggtatcagca gaaatcaagc tagtgagctt ataaaatcaa
     9541 aaaatataac tttaaacgaa aatatgatag ataaaccgag tttagaagta aagggcgatg
     9601 agagagttgt tgcaaatgat aatatttatg tgagtagagc cgctcttaaa ctaaaaggtt
     9661 ttttaggcga attaaaaccg tgttttttaa atttaaatgc tcttgatgtc ggcagcagta
     9721 ctggtggatt tgtgcaaatt ttacttgaaa atggtgttaa aagcgtaacc gctttagatg
     9781 tgggaagtgc tcaattaagc accgttttaa gaaacgataa aagagttata gtacaagaaa
     9841 atactgatat aagaaaattt aactcttcta aatttgattt ggttacggtt gatgttagtt
     9901 ttatatctat tttacaaatt ttaaacgata ttgaccgttt agctaaacga gatataattt
     9961 tactatttaa gccgcaattt gaagtaggag cgaatgccaa aagaagcaaa aaaggcgttg
    10021 tcaaagataa aaagctaata aacttatcta aagcaaaatt cgaaatagcc gcaagcgaac
    10081 ttggctggag tttaaaaaag agtaaagagt ctgtaataac tggtaaggag ggtaaccttg
    10141 agttatttta ctactatgtc aaaagataag atagaagcga ttgcgatagg ccattttgac
    10201 ggtattcaca aaggtcacaa agagcttata aaaaaattag gtaaaaacgg cgcgttggtc
    10261 gttgtagaaa gcgataaagc ttgcataact cccggagata gaagagaaga gtactccgga
    10321 gtaccctgtt tttactatca tttaaaagat atcgtagagc ttaggggaga cgagtttttg
    10381 aagcttttac aaaacgagtt tccaaattta aaacgtatag tcgtgggtta tgattttaaa
    10441 ttcggaaaag atagagcttg ggataaacac gatcttaaaa atttatttca cggcgaagtt
    10501 ttggttgtaa atgagtttag ttttgatggt ctcggtgttc atagctctgc tatcaggcgt
    10561 tttttaagag atggcgatat atatagagca aatcgtcttt tagggcgcga atatagcatt
    10621 aaaggcagag ttataagcgg tcaaggttta ggaaaaaaaa gtatatatcc gacgctaaat
    10681 ttggtggttg agccttatat cactcccaaa aacggagttt atgcaactag aacaaaaata
    10741 ggcgacgata cttatagttc tataactttt ataggcaata gatttacgac agatggcgct
    10801 tttagcatag aaagtcatct ttttgacgta gatttaaaag ataatatata tgaagttaga
    10861 gtatgtttta tagagagaat tagggataat tttaaattca actctctaga tgagctaaaa
    10921 actcagatat caaaagatat gcttatagca agaaatgtcg caaaatgctg tgatctgagt
    10981 ttacaagacg attatataca tgcaagggat ctggtttgag agatgaggtt tttaaacgtc
    11041 ctataaaaaa gcagtttgag tttgatgaaa gcgtagtgag tgtttttgat gatatggtta
    11101 gtagatccgt gccgtattat tgcgatgtac aggctcttat ctctttaatt ttaagtaaaa
    11161 atttgtcacc aaacgctaaa gtttttgatc ttggttgctc tactgctacg actttacttg
    11221 agatttttaa gcttagaaac gatctaagtt taaacggtgt cgatagtagt gaagctatga
    11281 taaaaaccgc aagaaataga tctttggctt acttggcaaa tttaaattta tatgtgagcg
    11341 atattttgga ttttgatttt agcggtagtg acgctgttat cttaaattat acgttgcaat
    11401 tcattcgtcc tataaaaaga gaggaattta taaagaagat atattcaaat ttaaaaagcg
    11461 gcggaatatt tatatttagc gaaaaattgg tttatgaaga taaaaaacta actcttgata
    11521 tgatagaaat atatgaaaat tataaacatt cgcaaggata ttctaaattt gagattgctc
    11581 aaaagcgtca agctttagaa aatatactta ttccatatag cgaaaatgaa aataaagaac
    11641 tctgtttaaa tgcaggattt aaaagcgtag aaacgatttt taaatgggca aattttgcta
    11701 catttatagc ttttaaataa ttcggttata attttgtatc tattttgttt ccaaaagaaa
    11761 ttacaatttg ttaatttctt aaggagacaa aatgaaaata cttaaaactt tttttagcgc
    11821 gaccattgtt tttggagcat taaatgcagc ggatatcgac gcaaatttga tagaagccgc
    11881 caaaaaagag ggcgttataa atagcgttgc tatgcctgat acatgggcaa actggaaaga
    11941 tacctgggat gatttagcta ggctttattc gcttaaacat agcgataccg atatgagttc
    12001 tgctcaagaa atagctaaat ttaaagccga gaaaaaaaac gccactgcag atatcggtga
    12061 tgttggtcaa agttttggtc gcatagcgat tttggagggc gttagcgagc cttttaaaac
    12121 tagttactgg gatcaaatac ctgattgggc aaaagacaaa gacggtcact ggatgttagc
    12181 ttataccggt actatagctt ttataataaa caatcaaaca gtaaaaaatc ctcctaaaac
    12241 ttggaaagat cttaaaaacg caacttataa gattacagta ggcgatgtaa gcgtagcggc
    12301 tcaagcagtt agcggagttt tggcggcaaa ttatgcttta ggaggagatg agagagactt
    12361 aagtccggct ttaaactttt ttgccgaatt agcaaaacaa ggtcgtttag ccatggtaga
    12421 tcctagtatt gcaaatttag aaaaaggcga gatagacgta gctataattt gggattttaa
    12481 cgctcttaat tacagagaca aagtaggcaa agatagatat ttggtaacta tcccgcaaga
    12541 cggatctata gtgagcggct atacgactat tatcaacaaa tatgctaaaa atataaacgc
    12601 agcaaaactt gctagagagt atatcttatc tgatcaaggt caaataaatt tagcaaaagg
    12661 ttacgcaaga ccgattagaa atgcttatat agagcttccc caagacataa aagacaaact
    12721 tataccagaa aatgagtata aaaatgctaa acctataaaa aatccggaag tttgggaaaa
    12781 gactgcaaaa aagcttccaa ggctttggca agaaaatgtt attataaata tcaaataggg
    12841 aataaaatat gaaaaaaata gtatttagtg ctttattgat ttataattat ttgtttgcgg
    12901 ctcagtatga ggcaaatttg gcaggacata tagcgataga ctcaaaaagc tttatcgaaa
    12961 ttccaaaaga cgctcccgaa ttttttcaaa gttacggtaa attttcaaat tttattatag
    13021 aagaaaaagt tgaaacatat agatctaaag gcgcgagaga tacggattat tatctacctt
    13081 ttgaaaatca gcctatacaa ggttatagag ggattaaata tatcccggga gacgcaacgt
    13141 accgagtttt accgatagcg gtttaggaaa aaaaagcata attcttacga tgttatgcta
    13201 tatattagtt taaatttgat tttaaaaatt taaaataccg aattgttaaa actatatttt
    13261 ttaaagataa atataagaaa tatcattatc ctatcacgtc tgagataagt aaagagcgtt
    13321 atttgagcgg agcggatttt gatttggaaa gttttcatat tattgacgga gagttttgtg
    13381 tagccgagga atttggacct tttttactga attttgataa aagtggaaat ttaaaagagg
    13441 tttatgatgt ttttgtagat ggcgtaaagc ttctctctcc agataatcca aacgaggcca
    13501 atcccgggta acgtcaaacg ctcacgcgga tttgaggcga tggcaagttc aaaagacggc
    13561 tcaaagctct tacttctcaa gtagagatcc aaataaaacg tatggtaacg agtttatttt
    13621 acttgaagta ggcttttctt aaggctaaat gatagatgag atataaaggt attttgatat
    13681 tttatacata aatttgtatc ggaaatttaa aataaattat ttttattgaa ggaagtaaaa
    13741 atgtctaagg tggttttagt aattctagac ggtcttgaat atagtacggc acagcagtgt
    13801 atgggtggtt tgctcgcact ttgtaatgca aatatgggta aaatttataa gatgaaaagc
    13861 gagcttccgt ctatctcaag accgctttac gagtgtatat tgacaggagt taaaccggct
    13921 ttaagcggca tactaaataa ttattgtaaa ccttttagca gcaataaaag tatatttgag
    13981 tatgcaaaac tagctaattt aaaagccggc gcggcagcgt attactggat aagtgaactg
    14041 tataataaaa ctttgtttga ccgggttaag gatagaatta taataaatga gcagagttta
    14101 aacatacctt acggcatttt ttattatgaa gacgactaca acgatagtca tttatttagt
    14161 gacgcagagt gtttgagagt taaattcgat cttgatttta ctctttttca ttctatgaat
    14221 atagatgata taggtcataa attttctcac gatagcaaag agtatagaaa tgctgctaga
    14281 aaagtagata ctatattatc ttctttggta ttaaaatggc tagaagaggg cgtaaacgtg
    14341 ataatcacaa gcgatcacgg tatgaataac gatggtactc atggtgggaa tttagatata
    14401 gaaagagacg tggcgttttt tgtttttggc gataagttta gttttgctag agttgaggta
    14461 gaacagagtg gaatttgcgg tttagtttgt gaaattttag gtgtagatca cgataaaagc
    14521 tttgctaaag agttattaaa atgaatagag aaaagtttat cgctactcta tttttaattc
    14581 cgttttttgt ggtatttttt atgtttatcg cagctccgtt tttatggatt ttgataaata
    14641 gttttataga tcaaaacggc aagtgggggt ttgataatta taaagagata tttgata
//
LOCUS       DAPPKW010000043        14553 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.043, whole genome shotgun sequence.
ACCESSION   DAPPKW010000043 DAPPKW010000000
VERSION     DAPPKW010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14553
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.043"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            112..1992
                     /locus_tag="RPW04_001144"
     CDS             112..1992
                     /locus_tag="RPW04_001144"
                     /inference="COORDINATES: protein motif:HMM:NF015894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF342 domain-containing protein"
                     /protein_id="HDX6295236.1"
                     /translation="MADEVIMPSIIVDTKNPYQDMEFIASNAGVSVDNVDFNIISVDT
                     RYKLKPEDDFISAIDSELRMFDDDEFMSNPNLSISQNYKVEFFDRRVKKQPMLPKVSL
                     GTNKNMTKVVASIKEDSNVKYYPSFERDLINFIQKKLLKANILIGIRDYIMLREINKV
                     TSILRIKEIIDKAFTFVVVTGVDPVVAVDDNMIFYYKSKLKNSEKNKDDKVNYSNRGF
                     VQGVTEGEVIIEYIKPKTGIAGRNVKGDVISVNEPKILIKEKINVSQNIDVKEDDDSI
                     KYIAKKNGYVNEEKGTYDIKDELDINEVSFKTTGSIETSLESDVKINIKEKDILKDAV
                     GAGMSIETTSINVEGNVAKGAHIVAKDVIIGGQTHAKSVIKAQTAEISVHLGRLICDE
                     AKIDRLESGYVRAKKVFINSVIGGEIIANEVHIKRLFANSSITASTLVEIDELKGTNN
                     RICIDSGEILNYEGKLEEYSKTMSKLKTDILVIPRELESKKNIIDSNRESVNSIKRRI
                     EELRSTGKAPPMSFLNKLKDFQALVYEYNSMLKDLNGKKAALNDLKEELKSMQSMVFK
                     AKIINKDRWKELNEIKFRLIEPKKDITYSTRENELAKLITLKCVTLGDEEIYEIKKSN
                     EI"
     gene            1995..2549
                     /gene="ruvA"
                     /locus_tag="RPW04_001145"
     CDS             1995..2549
                     /gene="ruvA"
                     /locus_tag="RPW04_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDX6295237.1"
                     /translation="MIKAIEGIITKKEPTNVWIKTLSGVSYGISISLFTSASLQKGEK
                     VELFITQVIREDANLLYGFIKESEQRIFEMLLKVNGIGASTAMAVCSSLGPDEFSIAV
                     MNGDDAVLRRVPGIGPKTARTLIAQLSDAKFGEINSMPSYQNEAFMALESLGFKRDRI
                     SKVLNECSSNDTASLIKEALKKLA"
     gene            2558..3595
                     /locus_tag="RPW04_001146"
     CDS             2558..3595
                     /locus_tag="RPW04_001146"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDX6295238.1"
                     /translation="MKFGIVFGGVSFEHEISIVSAIAVKKALKCELSFIFVDKFGDFY
                     LINSDDMRANFFSSHKYKNSKKLHLKKGGFAAHGIFGMNDLNVDCYINLIHGRDGEDG
                     KIAGMFEFYNVTFIGPRLEASVMSFNKELTKLLAHKCAVKSLPYEMIKRGDIVKTELP
                     FILKPARLGSSIGVSVVRDISNLDYALDVAFEFDKDILVEPFKEGIREFNLAGFKAEN
                     DFIYSFIEEPKKNDFLDFEQKYMSFSSSCAKEADIDDSLKIEIKDAFAKIYNGGNFDG
                     ALIRCDFFVLDNEVYLNEINPNPGSMANYLFTDFTSSVEKLANSIKPSKNIDIDYKFI
                     NSITSNKGKLA"
     gene            3664..3900
                     /locus_tag="RPW04_001147"
     CDS             3664..3900
                     /locus_tag="RPW04_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prevent-host-death protein"
                     /protein_id="HDX6295239.1"
                     /translation="MATFSKNEVYTATEVVRNFSSILTKIAKAEMKRAFIVKNNRFEA
                     VLLNMDEYERLNDAVVLLEAIYTTQKKERAENGD"
     gene            3890..4684
                     /locus_tag="RPW04_001148"
     CDS             3890..4684
                     /locus_tag="RPW04_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDX6295240.1"
                     /translation="MAIKDVKVNGGVYSINYDIVNPNADISILILHGWGANKEIMKKA
                     FLNHLDDFKQIYIDLPGFGKSTLKHPLDTKKYAIIVSEFLNLIGVKPDFIMGHSFGGK
                     VASLLNSPRLILLSSAGIITKKSFLVRFKIKIFKLIKLFGFGKFYKLFATKDVAGMSK
                     EMYETLKNVVDEDFRHIFANCKAKTLIFWGKDDKSTPLKSGETISKLIVNSEFYPLNG
                     DHFFFLLHSKFISDKIKISLAHETQSKNLDDAYAQGCILESGDDDA"
     gene            4677..6113
                     /locus_tag="RPW04_001149"
     CDS             4677..6113
                     /locus_tag="RPW04_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDX6295241.1"
                     /translation="MLEISLKLVSNFIITLCFGLYIITALQWYNYKFERVLFHYTKPL
                     WHLYYAIIPLTYISMFQNYVILFIGSILYGVAIILWQKKLDKRLVLTNRVKRFFLFLL
                     IFFVVSLFFKFEQIAVLQLIFSVGFALCFSFIYEYILALKFKKEAKNKINNISNLKIV
                     LITASFGKTSMKNFLYDMLKDDFNVYKTPRSVNTLSGIIRDINENLSFNTQIYIAEAG
                     ARLKGDIKDITEFLEPHFVIVGEIGDAHIEYFKSIENVRATKLEALNSSRIKKAFLHS
                     STLKNYDKNIVIYDILVKNIVSNLDGVKFSILYNAKELHFSSKLLGGFNAYNLCACIL
                     LAMELGVNEQTLQNAILKIKSVEHRLERIEAGGKIIIDDSFNGNLKGMKESYELVNSY
                     SGKKVLLTPGIVEGKSSLNEELSKKINEVFDIVVITNSLNEKSLTKFLVKPEVVLLKD
                     RSQMQDFLANHTVAGDLILFSNDAPNFI"
     gene            complement(6178..7377)
                     /locus_tag="RPW04_001150"
     CDS             complement(6178..7377)
                     /locus_tag="RPW04_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HDX6295242.1"
                     /translation="MKILVINSGSSSIKFKLYDMSDESVICKGLIEQIGAKNSYAKIV
                     TKTGEIAEKREEIPDHGTGIDVMNELLFNSHALTSLDEIDGVGHRVVQGADLFNDAVL
                     VDDDVLQKIEELIPLAPLHNPAHLAGMKETLKVRPDIPNVAVFDTVFHQTMPKSSYMY
                     PLPIEFYEKYKIRRYGAHGTSHQFVAKAGAKILGVDFDHFSCITLHLGNGASIAAIKN
                     GKCIDTSMGLTPLEGLMMGTRCGSIDPAIVPFLMKNANLSGEEIDTIMNKKSGLLAIG
                     GSNDMREIEARMDAGDENAKLAFEMFVLRIKKYIGAYISILGEINAIIFTAGIGENDA
                     RIREAVCSGLEIFGIRMDKDKNAAKKDEPRRVGLPETKVRIIIVPTDEELAIAEDTLR
                     IINQSKK"
     gene            complement(7378..8772)
                     /gene="pta"
                     /locus_tag="RPW04_001151"
     CDS             complement(7378..8772)
                     /gene="pta"
                     /locus_tag="RPW04_001151"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDX6295243.1"
                     /translation="MLKAIYILESDYQNDKFRQNLLKELSEISNKNTIFFPISDINEK
                     NCNTFLTKSEAKEILKNGKKNQLIKSIISKFDSIDANFIVIVGSSIESLDADIAKNLN
                     APFYLSPESEFKKDILGFTYINNINEIKTANSSCITPLKFEKMLFDRAKSNLKTVVLP
                     ESNDDRVLKAAQILLENEAVNIILLGEKINIEERAKFLNLNLEKAVIINTKDNAYKDD
                     FTNTLYELRKSKGMELEKAKSLMEDRTYFGTMLVYKGVADAMVSGASTTTAQTIRPAL
                     QFIKMKPGISNVSGSFIVCLDTKTQIYADCAITPNPTTDQLANIAISTAKTAKNFGLD
                     PKVAMLSYSTGDSGCGEDVNFIIEATKKAKELDPNLKIEGPIQFDAAVDKAVAAKKLP
                     NSAVAGNANTFIFPNLNCGNICYKAVQRTANAIAIGPILQGLNKPVNDLSRGCLVEDI
                     VNTVLISAIQSQGE"
     gene            8848..9552
                     /gene="flgH"
                     /locus_tag="RPW04_001152"
     CDS             8848..9552
                     /gene="flgH"
                     /locus_tag="RPW04_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HDX6295244.1"
                     /translation="MKKKYILVFILPFFAGCATGANPDISMEPPAYVEQLPSKENGIG
                     VSSPGSLFGRGDNPLFSDRKAMNVNDIVTVVIQETANQTSKADKTTKKDSTTSLSGGT
                     FTTPANSALSGIANDINKISGIGFSAGGANNYSGSGTSTRNETFNTTVSARIIKILNN
                     GNYFIEGSKEILINNEKQIMQISGVIRPYDISQNNQIESRYISDAKILYKTEGDLQRA
                     TSKPWGTKVLETIWPF"
     gene            9737..10360
                     /locus_tag="RPW04_001153"
     CDS             9737..10360
                     /locus_tag="RPW04_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF305 domain-containing protein"
                     /protein_id="HDX6295245.1"
                     /translation="MKKTVIAISIALAFNLSAAQNDHMHDSIGNSASYKIMMSMHEPM
                     VNTPFVSSGSVEVDFLSNMIPHHQGAVDSSKLLLEFSKNDTVRKIASTIISDQEKEIK
                     EFNDILKNKTYSTTKLDSAKYDEFVAAERLDMKNMMADMGKVKDTNNVDRDFLESMIF
                     HHKGAIDASNQILKYTKDKTIIQIAKNIIKAQEKEIKEFNELLKSGI"
     gene            10545..12221
                     /locus_tag="RPW04_001154"
     CDS             10545..12221
                     /locus_tag="RPW04_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011992268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HDX6295246.1"
                     /translation="MKKLNGSQMISEALKHEGVSVVFGYPGGAALNIYDETYKQDYFT
                     HVLTRHEQAAVHAADGYARASGKVGVAFVTSGPGFTNAVTGLATAYADSIPLVLISGQ
                     VPLPLIGTDAFQEIDAVGISRPCVKHNFLVKTIDELPRILKEAFYIARSGRPGPVHVD
                     IPKDVTAAMGDFNYPSEIKMQTYKPNVKGHPNQIKKACEIISKSKKPIVYLGGGAINS
                     NAADEARKFIHTANIPTVETLMALGTLRSDDELNLGMVGMHGSYAANMALSEADLIIC
                     FGARFDDRVTGKLSEFAKNAKVIHVDIDPSSIGKIVNAEYPIVGDLKNVLIELNDKIN
                     ISEGSFDPWIEQISIYKKLHPLTYKDSDEILKPQWVIQNLAKIAGDDAVIATDVGQHQ
                     MWVAQFYPFTRPRQLLTSGGLGTMGYGLPAAMGAAWAVDVPVVAVSGDGGFLMNIQEL
                     MTLSANKKRVINIILNNNFLGMVRQWQTFFYGERYSNTDLSIQPDFVKICEGFGGKGF
                     VVKTKDEFKNALKEALKIDTVSVIEVKIDRFENVLPMVPAGAAIYNMILE"
     gene            12225..12686
                     /gene="ilvN"
                     /locus_tag="RPW04_001155"
     CDS             12225..12686
                     /gene="ilvN"
                     /locus_tag="RPW04_001155"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HDX6295247.1"
                     /translation="MRRVISAIVLNEHGVLSRIAGLFSGRGYNIDSLTVAPVPDSEFS
                     RVTIVTSGDERVFEQIVKQLHKLIPTYKVIDSGEFVEKEMVLVKISLNENFSGLDPIL
                     KSYNGMVANANENCIIVMACDNAQRIDCFIKVMKKYNPIQIVRSGSVMMEV"
     gene            12686..13633
                     /gene="lpxD"
                     /locus_tag="RPW04_001156"
     CDS             12686..13633
                     /gene="lpxD"
                     /locus_tag="RPW04_001156"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HDX6295248.1"
                     /translation="MRLSEIYKILNLEFVGADMEISALNSLGRANVDELSYCDSEKNS
                     KFIDESRAGAILVTSNLANLVKSRAVIVENPHLAFAILSKTFSKPLFYPKSPAVIDES
                     VTIMPNVYIGNNVKIESRSIIMAGAYIGDNVTIGQDCIIHPNVVIYNDCKIGNECHIN
                     ANAVIGSDGFGYAHTKTGEHIKIYHNGWVELEDNVEIGACTTIDRGVFEPTIVKKYSK
                     IDNLVQIGHNCEIGFGCIIVSQTGLAGSTKLGRNVVMGGQSGTAGHLKIGDFAQIAGR
                     GAVSKDLEPGKNYAGYPIMELKEWFKLQAKFLKEFGVKR"
     gene            13630..13857
                     /locus_tag="RPW04_001157"
     CDS             13630..13857
                     /locus_tag="RPW04_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295249.1"
                     /translation="MTNAKLEKVIALEGTKKGSILVAHIDEPYGKDSKPIISIGVSLK
                     GDNEPDWKVHIPYENLDELIDVLNEIKKAKD"
     gene            complement(13854..14462)
                     /locus_tag="RPW04_001158"
     CDS             complement(13854..14462)
                     /locus_tag="RPW04_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDX6295250.1"
                     /translation="MLSDIINFLVDLVADWGYIGIFLLMALESSFFPFPSEVVMIPAG
                     YLVYKGEMSVTLAFLAGAFGSLAGALFNYYLCFFFGRSFIQKYGKYVGITDEKMDKFE
                     NFFNKYGEISTFNCRLIPGIRQYISLPAGLAKMNILRFCIFTTLGAGIWVAILIAIGY
                     FLGDQKELIAEYLHTIIIVLLIVVAMITAAYIYIQKKKKAKS"
BASE COUNT         5083 a         2074 c         2692 g         4704 t
ORIGIN      
        1 aagtcaattt gtatttataa atcagtcttt gttttgcgac tattttttat atagaattta
       61 gtggctttaa tgtataatta aatattaatt aatcatagac caaggatttt tatggctgat
      121 gaagttataa tgccgtcgat aatagtagat acgaaaaatc catatcaaga tatggaattt
      181 atagcttcta acgccggagt tagcgttgat aatgttgatt ttaatataat ttccgtcgat
      241 acgcggtata aattaaaacc cgaagatgat tttataagcg ctatcgacag cgagcttcgt
      301 atgtttgatg atgacgagtt tatgtcgaat ccaaatttat ctatatctca aaattataaa
      361 gtagaatttt ttgatagacg agttaaaaag cagcctatgt taccaaaagt atcattaggt
      421 acaaataaaa atatgacaaa agtagtagcc tctataaaag aggattcaaa cgtgaaatac
      481 tatccttcat ttgaacgaga tcttataaat ttcatacaaa aaaagttatt aaaagcaaat
      541 atactgatag gtataagaga ctatataatg cttagagaga taaataaagt aacgtctatt
      601 ttgcgtataa aagagattat cgataaggca tttacgtttg tagtggtcac tggagtagat
      661 cctgtagtgg ctgtagacga taatatgata ttttactata aaagcaaatt aaaaaatagt
      721 gaaaagaata aagacgacaa ggtaaattac tcgaatagag gatttgttca aggagttacg
      781 gaaggcgaag tcattataga atatataaag cctaaaaccg gaattgctgg tagaaatgtt
      841 aaaggagatg ttatctctgt taatgagcca aaaattctaa taaaagagaa gattaacgta
      901 agtcaaaata tagatgtaaa agaagatgac gatagcataa aatacatagc taagaaaaac
      961 ggttacgtaa acgaagaaaa aggcacgtat gatataaaag atgagcttga tataaatgaa
     1021 gtaagcttta aaacaaccgg atctatagaa actagcttag aatctgacgt aaaaatcaat
     1081 attaaagaaa aagatatttt aaaagacgcc gtcggtgctg gcatgagtat agaaacaact
     1141 tctataaacg tagaaggaaa cgtagctaaa ggcgcgcata tcgtagccaa agatgttatt
     1201 ataggtggtc aaactcatgc aaaatcagtt ataaaggctc aaacagcaga gatatccgtg
     1261 catttagggc gattaatatg tgatgaagca aagatagata ggttggaaag cggttatgtt
     1321 agggcaaaaa aggtatttat aaactcagtt ataggcggag aaataatagc aaatgaagtt
     1381 catatcaagc gtctttttgc aaactctagt ataactgcat cgactttggt agaaatagac
     1441 gaactaaaag gaacaaacaa tagaatttgc atagattctg gagagatact aaattatgaa
     1501 ggaaagctag aagagtactc taaaactatg tctaagctaa agaccgatat attagttata
     1561 ccaagagagt tagaaagcaa aaaaaatatt atagactcaa accgagaatc ggtaaattcg
     1621 ataaaacgta gaatagaaga gttaagaagc acaggcaaag cgcctcccat gtcattttta
     1681 aataaattaa aagattttca agctttagtc tatgaatata atagtatgct aaaagatcta
     1741 aacggtaaaa aagctgcttt aaacgatttg aaagaagagt taaaaagtat gcaaagtatg
     1801 gtatttaaag ctaaaattat aaataaagat aggtggaaag agctaaatga gattaaattt
     1861 agattgattg aaccaaaaaa agatattact tatagtacga gagaaaatga gttggcgaag
     1921 cttataacat taaagtgcgt tactttgggc gatgaagaga tctacgaaat aaaaaaatca
     1981 aacgagatat aacaatgata aaagcaatag aaggaataat tacaaaaaaa gagccgacta
     2041 acgtctggat aaaaactctt agcggagtga gttacggaat ttccatatca ctttttacta
     2101 gcgcaagctt gcaaaaaggt gaaaaagtcg aactttttat aactcaagtg ataagagaag
     2161 atgcgaattt gctttacggt tttataaaag agagtgagca gcgtatattt gaaatgcttt
     2221 taaaagtaaa cggtataggt gcttcaacgg ctatggcggt ttgttccagc ttgggtccag
     2281 atgaatttag tatagcagtt atgaacggcg atgacgctgt tttaagaaga gtccctggta
     2341 taggtccaaa aactgcaaga actcttatag ctcaactaag cgatgctaag tttggagaga
     2401 ttaattctat gcctagttat caaaatgaag cgtttatggc tttagaaagt ttaggtttta
     2461 aaagagatag aatttcaaaa gtattaaatg aatgttctag taatgatact gcttctctta
     2521 tcaaagaagc gcttaaaaaa cttgcgtaag gatagttatg aaatttggta tagtatttgg
     2581 cggagtgagt tttgaacatg agataagcat agtctcggcc atagcggtaa aaaaggcttt
     2641 aaagtgcgaa cttagtttta ttttcgtaga taaattcgga gatttttatc ttataaatag
     2701 tgacgatatg agagcaaatt tttttagcag tcataagtat aaaaactcaa aaaaacttca
     2761 tctaaaaaaa ggtggttttg cggctcacgg gatatttggt atgaatgatc taaacgtgga
     2821 ttgctatata aatttaatac acggcagaga tggcgaagac ggcaaaatag ccggtatgtt
     2881 tgagttttat aacgtaactt ttattggccc tagattagaa gctagcgtga tgagtttcaa
     2941 caaagaactc acaaaactat tagctcataa atgcgctgta aaatctcttc cttatgagat
     3001 gataaaaaga ggcgatatag ttaaaaccga acttcctttt atactaaaac cagcaagact
     3061 tggaagtagt ataggcgtga gcgttgttag ggatatttca aatttagatt atgcgttaga
     3121 cgtggcattt gagtttgata aagatatctt agtagagcct tttaaagaag gtataagaga
     3181 gtttaattta gcaggattta aagccgaaaa tgattttata tactctttta tagaagagcc
     3241 aaaaaagaat gattttttag attttgaaca aaaatatatg agtttttcta gtagctgtgc
     3301 aaaagaagcc gatatagacg atagtctaaa aatagagata aaagacgctt ttgctaaaat
     3361 ttataatggc ggaaattttg acggagcttt gataagatgt gatttttttg ttttagataa
     3421 tgaagtttat ctaaatgaga taaatccaaa tcccggtagc atggcaaact atttatttac
     3481 cgactttacg tcatctgtag aaaaattggc aaattctata aaaccatcaa aaaatataga
     3541 tatagactat aaatttatta attctataac aagcaataaa ggtaagctag cataaaactt
     3601 taaaatcttt ctaagccaaa tttatgtaga attttacata aaattctaca ttaaggatct
     3661 gtcatggcta catttagtaa aaatgaagta tacaccgcaa cagaagtcgt gagaaatttt
     3721 agttccatac ttactaaaat cgcaaaagca gagatgaaaa gagcgtttat agttaaaaac
     3781 aaccgctttg aagcggtact tttaaatatg gacgagtacg aaagactaaa tgatgcagta
     3841 gttttgctag aagcgatata tactactcag aaaaaagaga gagctgaaaa tggcgattaa
     3901 agacgtaaag gtaaatggcg gagtttatag cataaattat gatattgtaa atcctaatgc
     3961 agatatttct atcttgattt tgcatggatg gggtgcaaat aaagagatta tgaaaaaagc
     4021 ttttttgaac catttagatg atttcaaaca gatatacata gatcttcccg gttttggtaa
     4081 aagtacgcta aaacatcctt tagatacaaa aaaatacgct attatagtat ctgaattttt
     4141 aaatttaata ggcgtaaaac ctgattttat catggggcat agttttggcg gcaaggttgc
     4201 tagcttgtta aatagtccta gactaattct tttaagcagc gccggcataa taactaaaaa
     4261 atcattttta gttcgtttta agataaagat ttttaaacta attaaattat ttggttttgg
     4321 taaattttat aaactgtttg cgacaaaaga tgtggctgga atgagtaaag agatgtatga
     4381 aactctaaaa aatgttgttg atgaggattt tagacatatt tttgcaaatt gcaaggctaa
     4441 gacattgatt ttctggggaa aagatgataa atcaacgcct cttaaaagtg gagaaactat
     4501 atcgaagctt atcgtaaata gtgagtttta tccgctaaat ggtgaccact ttttcttttt
     4561 attgcactct aaatttataa gcgataagat aaaaatatcc ttagcgcatg agactcaaag
     4621 taaaaattta gatgacgcat atgcacaagg ttgtatttta gaatcaggag atgacgatgc
     4681 ttgaaatatc tttaaaatta gtttcaaatt ttattataac gttatgtttt ggtttgtata
     4741 tcatcactgc tttgcaatgg tataattata aatttgagcg tgtgttattt cattatacta
     4801 aacctttgtg gcatctttat tacgctatta ttccattgac gtatataagt atgtttcaaa
     4861 attatgtaat tttatttatc ggatctattt tatatggcgt ggccattatt ttatggcaaa
     4921 aaaagcttga taaaagactg gttttaacaa atcgagttaa gagatttttt ctttttttat
     4981 tgatattttt tgttgttagt ttatttttta aatttgaaca gatagccgta ttacagctta
     5041 tatttagtgt tggttttgct ctttgtttta gctttattta tgagtatatt ttggctttga
     5101 aatttaaaaa agaggctaaa aataagataa ataacatttc aaatttaaaa atcgtattga
     5161 taactgctag tttcggtaaa actagtatga aaaattttct ttatgatatg ctaaaagatg
     5221 atttcaatgt ttataaaacc ccaagaagcg taaatacttt atcaggaata ataagagata
     5281 taaatgaaaa cctaagtttt aatacccaaa tttatatagc tgaagcaggt gctagactaa
     5341 aaggagatat caaagatata actgagtttt tagagcctca ttttgtgata gtcggagaga
     5401 taggagacgc tcatatagag tattttaaaa gcatagaaaa tgttcgcgct acaaagcttg
     5461 aagcccttaa ttcatctaga attaaaaaag cttttttaca tagctctact ttgaaaaact
     5521 atgataaaaa tatagtaatt tatgatattt tggttaaaaa tatagtttca aatttagatg
     5581 gagttaaatt tagtatttta tataatgcta aagaacttca ttttagttca aagttacttg
     5641 gaggatttaa cgcttataat ctttgtgctt gtatacttct tgcgatggaa cttggagtaa
     5701 atgagcaaac tcttcaaaat gctattttaa agataaaaag cgtggaacat cgtttggaga
     5761 ggattgaagc tggtggaaaa atcatcatcg atgatagttt taatggaaat ttaaaaggga
     5821 tgaaagagag ctatgaactt gtaaatagct atagcggaaa gaaggtattg ctaactcctg
     5881 gtatagttga aggaaaaagt agcttaaatg aagagctgtc aaaaaagata aatgaagtgt
     5941 ttgatatagt cgtgataaca aatagtttaa acgagaagtc tcttactaaa tttcttgtaa
     6001 aaccagaagt cgtgctgtta aaagatagat cgcaaatgca agattttttg gcaaatcaca
     6061 ctgttgccgg agatctcatt ttatttagta atgacgcacc gaatttcata taaagtaagg
     6121 cagtatataa atttaaaaaa gagctaaatt tattcaaaaa tagctcttta acaattgtta
     6181 tttttttgat tgatttatta tacgcagagt atcttctgct atagctagtt cttcatccgt
     6241 aggaactatg atgatgcgaa cttttgtttc aggaagacct acgcggcgtg gctcatcttt
     6301 tttagcggca tttttatctt tatccattct tataccaaat atttcaagtc cgctacaaac
     6361 ggcttccctg attctagcat cattttcacc tataccagcg gtaaatatga tagcatttat
     6421 ttcacccagt attgatatat aagcaccgat atattttttt atgcgcagca caaacatctc
     6481 aaaagcaagt tttgcatttt catctccggc atccattcta gcttctattt cacgcatatc
     6541 gtttgagccg cctattgcta aaagaccgct tttcttattc attatggtat caatttcctc
     6601 gccgcttaag tttgcatttt tcatcaaaaa aggtacaatg gcaggatcta tgcttccgca
     6661 tcttgttccc atcataagac cttcaagagg agttaaaccc atacttgtat cgatacattt
     6721 tccatttttt atagctgcta tactagcacc gtttccaagg tgtagcgtga tacagctaaa
     6781 atggtcaaaa tcaacaccta gaatttttgc gccggctttt gctacaaact gatgcgatgt
     6841 accgtgagca ccgtatcttc ttattttata tttttcataa aattcaattg gaagagggta
     6901 catatatgag ctttttggca ttgtttgatg aaaaacggta tcaaaaacag ctacatttgg
     6961 aatatctggt ctaactttca aagtctcttt catgcctgct aagtgagctg gattatgaag
     7021 cggagcaagc ggtataagtt cttctatttt ttgcaaaaca tcatcatcta caagtacagc
     7081 gtcgttgaaa agatctgcgc cttgaactac cctgtgacct acgccgtcta tctcatctag
     7141 gcttgttaat gcgtgactgt taaataaaag ctcattcatc acgtctattc ctgtaccgtg
     7201 atcaggaatt tcttctcttt tttcagctat ttcaccggtt ttcgtgacta tttttgcata
     7261 tgagtttttt gcgcctattt gttctatcaa acctttgcat ataacgcttt catcgctcat
     7321 atcgtaaagt ttaaatttaa tcgagctgct acctgagttt ataaccaaaa ttttcattta
     7381 ttctccttga gattgtattg cgcttattaa gaccgtattt actatatctt caaccaaaca
     7441 tccacgactt agatcattta ctggtttatt tagtccttgc aaaattggac ctatagctat
     7501 agcatttgcg gttctttgta ctgctttata gcagatattt ccgcagttta aatttggaaa
     7561 tataaatgta tttgcgtttc cagctactgc tgagtttggt aattttttag cggcgactgc
     7621 tttatctacc gcagcgtcaa actgaattgg accttctatt tttaagttag gatcaagttc
     7681 ttttgctttt tttgttgctt ctattataaa atttacatct tcaccacatc cactgtcgcc
     7741 agtggagtaa cttagcattg ctactttagg atcaagtcca aaatttttag ctgtttttgc
     7801 agtgcttata gctatatttg ctagttggtc tgttgtggga tttggcgtga tagcgcaatc
     7861 tgcgtaaatt tgagttttag tatctaaaca gacgataaaa cttccactta cattgctaat
     7921 tcccggtttc attttgataa attgaagagc agggcgaatg gtctgtgcag tagtcgtgct
     7981 agctccgctt accatagcat ctgctacgcc tttataaact agcatcgttc caaaatacgt
     8041 tctatcctcc atcaatgatt ttgctttttc tagctccatc ccttttgatt ttctaagttc
     8101 atataaggta tttgtaaaat catctttgta ggcgttatct tttgtgttta taataactgc
     8161 tttttctaaa tttagattta gaaatttcgc tctttcttct atatttattt tttctcctaa
     8221 aagtattata ttcacagctt cattttcaag caaaatttga gcagctttta atactctatc
     8281 atcattgctt tctggtaaaa ctactgtttt caaatttgat ttagctctat caaaaagcat
     8341 tttttcaaat ttaagcggcg ttatacagct actgtttgcg gtttttatct cgtttatatt
     8401 attaatgtaa gtaaatccta aaatatcttt tttaaactca ctttctgggc tgagataaaa
     8461 aggagcgtta agatttttag ctatatcggc gtcaagactt tctatcgaac ttcctactat
     8521 aactataaaa ttcgcatcta tactatcaaa tttagagata attgatttta ttaattgatt
     8581 ttttttacca ttttttaaaa tttctttagc ttcacttttt gttagaaaag tgttacaatt
     8641 tttctcattt atatcgctaa tgggaaaaaa tatagtattt ttgttactaa tttcactaag
     8701 ttctttcagt aaattttgcc taaatttatc gttttggtag tccgattcaa gaatatagat
     8761 agcttttaac actgttttct cctatgttta atgtatttgg aactcaattt gctttaatta
     8821 tagcatattt atattttaag gcagtttatg aaaaagaaat atattttagt ttttatttta
     8881 ccgttttttg caggttgcgc aacaggtgcc aacccggaca tttccatgga gccaccggca
     8941 tatgtggaac agcttccatc aaaagaaaac ggcataggcg taagcagtcc aggcagtctt
     9001 tttggtagag gagacaatcc gttattttca gatagaaaag ctatgaatgt aaatgatatc
     9061 gtaactgttg ttatacaaga gacggcaaat caaacatcaa aagccgataa aacaacaaaa
     9121 aaagatagca ctacgtcttt gagcggaggt acttttacga ctcctgctaa ctcagcgcta
     9181 tctggaatcg caaatgatat taataaaatt tcaggtatag gattttcagc cggcggagca
     9241 aataattata gcggaagcgg cactagtact agaaacgaga cttttaatac gacagtttct
     9301 gcaaggatta taaaaatcct aaataacggt aattatttta tagaaggtag taaagagatc
     9361 cttataaata acgaaaagca gataatgcag ataagcggcg ttataagacc atatgatatt
     9421 agccaaaata atcaaataga gtctcgctat atctctgatg ctaagatact atataagaca
     9481 gaaggagatt tacaaagagc tactagcaag ccttggggaa caaaggtttt agagactatt
     9541 tggccttttt aaatttataa catcgacttt tgaaatattc caaatgaaaa agagtttagc
     9601 ttaaatttat tatttataat atgctaaact ctactttgct tacttataat atataattta
     9661 tattaaaaca attatcaaaa tatttagtat ttttagttta aattctcatt tataaattta
     9721 agtgtaaagg acaactatga aaaaaacagt tatagcgata agcatcgctt tggcttttaa
     9781 tttaagtgct gctcaaaatg atcatatgca cgactccatc ggtaattctg cgtcatataa
     9841 aataatgatg agtatgcatg aacctatggt aaatactcct tttgtaagtt caggtagcgt
     9901 ggaagtcgat tttttaagca atatgatacc gcatcatcaa ggagcggttg attcttctaa
     9961 gcttctactt gaatttagta aaaacgatac agtaagaaag atagcaagca ccataatatc
    10021 agatcaagaa aaagagataa aagagtttaa cgatatttta aaaaacaaaa cttattctac
    10081 tacaaagcta gatagtgcta aatatgatga gtttgttgcc gccgaaagat tagacatgaa
    10141 aaatatgatg gcagatatgg gaaaggtaaa agacactaat aacgtagata gagattttct
    10201 agagtctatg atatttcatc ataaaggtgc catagacgct tcaaatcaaa ttttaaaata
    10261 cacaaaagat aaaactataa tacaaatagc aaaaaatatc atcaaagccc aagaaaaaga
    10321 gataaaagag tttaacgagc ttttaaaaag cggtatttaa atctaaatat actaaactaa
    10381 atatgtgatt tatcctacta taattatata taaatttgat aagtgtgtga tttctacaca
    10441 cttatcgata tttttcatat atttttaacc ttgcttttat tctgttttaa atttacttaa
    10501 cataattaac gctataattt tgtattttat acaaaggtgg aacgatgaaa aaattaaatg
    10561 gttcacagat gataagtgaa gcattaaagc acgaaggagt tagtgttgtt tttggctatc
    10621 ctggaggagc ggctttaaac atttatgatg aaacatataa gcaagactat tttactcatg
    10681 ttttgactag acatgagcaa gcagcagttc atgctgctga tggatatgct agagcttctg
    10741 gcaaggtcgg tgttgctttt gttacaagtg gtccgggttt tacaaatgcc gtgacaggtc
    10801 tcgctactgc ttatgccgat tcgattccac tggtgcttat aagcggtcaa gtcccgctac
    10861 cgctcatagg tactgatgct tttcaggaga ttgatgcggt gggaatttct cgcccttgtg
    10921 taaaacataa ttttttagtt aaaactatag atgaacttcc acgtatttta aaagaagctt
    10981 tttatatagc tagaagcgga cgtccgggcc ctgttcatgt ggatatacca aaagacgtaa
    11041 ctgcggctat gggcgatttc aattatccaa gcgagataaa aatgcaaacc tataaaccaa
    11101 atgtaaaagg tcatccaaat cagattaaaa aagcgtgtga gataatatca aaatccaaaa
    11161 aacctatagt ttatctaggc ggaggtgcta taaatagtaa tgctgcggat gaggctagaa
    11221 aatttattca tactgcaaac atcccgactg ttgaaaccct tatggctctt ggaactttaa
    11281 gaagcgacga cgagttaaac ttaggaatgg tcggaatgca tggaagttac gctgcaaata
    11341 tggctttaag cgaagcggat ttgattatct gttttggagc taggtttgat gatagggtaa
    11401 ctggtaagct tagtgaattt gcaaaaaatg caaaagttat acacgtagat atagatccaa
    11461 gcagcatcgg aaagatagtg aatgcagagt atcctatagt aggcgatcta aagaatgttt
    11521 taatagaatt aaatgataag ataaatatct cagaaggcag ttttgatcca tggatagagc
    11581 agatatctat atataaaaaa cttcatccgc ttacctataa agacagcgat gagattttaa
    11641 aaccgcaatg ggttattcaa aatttagcca aaatagccgg agatgacgct gttatagcaa
    11701 cggatgtcgg acaacatcag atgtgggtag cgcagtttta tccatttact cgtccaaggc
    11761 aacttcttac tagcggcgga ttaggaacta tgggttatgg acttcctgct gctatgggcg
    11821 ctgcatgggc ggttgatgtt cctgtcgtag cagttagcgg agatggtgga tttcttatga
    11881 atatacaaga attaatgact ttatcggcaa ataaaaaacg cgttataaat ataattttaa
    11941 ataataattt tttaggaatg gttcgtcagt ggcagacgtt tttttatggt gaaagatatt
    12001 caaatacgga tcttagcatt caaccagatt ttgttaaaat ttgtgagggt tttggcggaa
    12061 aaggttttgt tgtaaaaact aaagacgagt ttaaaaatgc acttaaagag gctcttaaaa
    12121 tcgatactgt aagcgttata gaagttaaga tagatagatt tgagaatgtt ttacctatgg
    12181 ttccagccgg agctgcaatt tataatatga tattggagta ggagatgaga agagttatat
    12241 cggctattgt tttaaatgaa catggcgttt taagtcgtat tgcagggctt ttttcagggc
    12301 gtggatataa tattgactcg ctcaccgtag ctccagtacc agatagtgag ttttcaagag
    12361 ttactatagt gactagtggt gatgagaggg tttttgaaca gatagtaaaa caacttcata
    12421 aacttatacc gacttataaa gttatagata gcggtgagtt cgtagaaaaa gagatggttt
    12481 tagtaaaaat atctttaaat gaaaacttta gtggattaga tcctatatta aaatcatata
    12541 acggtatggt tgcaaatgca aatgaaaatt gcatcatagt catggcgtgt gataatgctc
    12601 agcgaattga ctgttttata aaagtaatga aaaaatataa cccgattcaa atagtaagaa
    12661 gcggatcggt aatgatggaa gtatgatgag attaagtgaa atttataaga ttttaaattt
    12721 agagtttgta ggcgccgata tggaaatttc ggctctaaat tctcttggaa gagctaatgt
    12781 agatgagctt agttattgcg atagcgaaaa aaatagtaaa tttatagatg aaagcagagc
    12841 gggagctatt ttagtaactt caaatttagc aaatttagta aaaagtagag ccgtaatagt
    12901 agaaaatcca caccttgctt ttgctatttt atcaaaaacg ttttctaagc ctctatttta
    12961 tccaaaatcc ccagctgtga tagatgaaag tgttactata atgccaaatg tatatatagg
    13021 taacaatgta aaaatagaat ctagaagtat catcatggca ggagcttata taggagataa
    13081 cgtaaccata ggacaagact gcataattca tccaaatgtt gtaatatata atgattgcaa
    13141 gataggaaat gagtgccata taaatgctaa tgcggttata ggaagtgatg gttttggata
    13201 tgctcataca aaaaccggtg agcatataaa aatttatcat aatggctggg tagaattaga
    13261 agataatgta gaaataggag cttgcacaac tatagataga ggcgtttttg agccgactat
    13321 tgttaaaaaa tatagcaaaa tagataatct agttcaaata ggtcataatt gcgagatcgg
    13381 ttttggttgc attatcgtaa gtcaaacggg tcttgctgga agcacgaaac tcggacgaaa
    13441 tgttgttatg ggaggacaaa gcggtactgc cggtcactta aaaataggag attttgctca
    13501 aatagcaggt cgcggcgctg ttagcaaaga tttagaaccg ggaaaaaact atgcaggata
    13561 tcctataatg gagttgaaag agtggtttaa acttcaggct aaatttttaa aagagtttgg
    13621 agtaaaaaga tgacaaatgc taaattagaa aaagttattg cattagaggg caccaaaaaa
    13681 ggatctattt tggtagctca catcgatgag ccttatggaa aagactcaaa gcctattata
    13741 agtataggag ttagtttgaa aggcgataat gagccagact ggaaagtaca tataccttat
    13801 gaaaatttag acgaacttat agatgtttta aatgagatta aaaaagcaaa agattagctc
    13861 tttgcttttt tcttcttttg gatatagata tatgcagccg taatcatcgc tactactatg
    13921 agaagcacta ttattatagt atgtaagtat tcagcgataa gctctttttg atcacctaaa
    13981 aaatatccga tagctatcaa aatcgctacc caaatgccgg ctcctaaagt agtaaaaata
    14041 caaaatctaa gaatattcat tttagctagc ccggcaggaa gacttatata ctgccttatg
    14101 cccggtatca atctgcagtt aaatgttgaa atttctccgt atttattaaa gaaattttca
    14161 aatttatcca ttttttcatc tgttattcct acgtattttc catatttttg tataaaactt
    14221 ctaccgaaaa agaaacataa atagtagtta aataaagctc cggctaagct gccaaaggct
    14281 ccggctaaga aagctagagt aacactcatt tcgcctttat atacaagata gccagcaggt
    14341 atcatcacga cttcgctcgg aaatggaaaa aaactactct caagagccat tagtaaaaat
    14401 atacctatat aaccccaatc agcgactaga tcaactagaa aatttataat atcgcttagc
    14461 acttatatcc tttaataaaa atgtgtattt tagcaacata tggtaaatgt ttatcgttta
    14521 attatttaaa tttatttgct atttaagtgt ttt
//
LOCUS       DAPPKW010000044        14484 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.044, whole genome shotgun sequence.
ACCESSION   DAPPKW010000044 DAPPKW010000000
VERSION     DAPPKW010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14484
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.044"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..677)
                     /locus_tag="RPW04_001159"
     CDS             complement(<1..677)
                     /locus_tag="RPW04_001159"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295251.1"
                     /translation="MIITNNNQAAQSQITQKDEKKEEKKDLKSEISSKTIFKKDVIQN
                     ADIPLSKLDLELNKLTNKLLNALKASNEEGGYKPKILAEVKMAQVAPNLAKDLNELSK
                     ALKSEPSLIKLANKLDEFLKPVEHIKNTNMAQTIKDTGIMLEAKIAQSLNPQTLPTSI
                     KELLSLMKNVSNKQLENSFLNLAKDESTDIAKNFENLKNILQNAKDKNQQIIQTSNFK
                     GLIDTHA"
     gene            complement(658..1830)
                     /locus_tag="RPW04_001160"
     CDS             complement(658..1830)
                     /locus_tag="RPW04_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002948581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDX6295252.1"
                     /translation="MSFIFIANGLVVSSAGVLLTSMNADKTMIGVITSFFFIGALTCT
                     VVSHRLISKVGHMRAYAIFTAIFAISALLHDLSSNLIVWAFLRFMLGFCYYSIVMVIE
                     SWLNAKTANSIRSRVLAFYEIIFYSCFGLGAIIMSLNLDATKVFLIGTIFIILGSIPL
                     NFLKVRSPQIPQTANISLPKIYGIAPLALATSIVAGLLINGFFSMSALFILAQGYSAK
                     EAGVFIVSSMCGGFLSHMFFGVLSDKFGRKFAIILASCIALISSLLFIVIKPSINIQY
                     IFAFFLGIGIFVLYALALARANDVIEDKSRCVEVGRALLFSYLLGSFFSPLIIGFAIN
                     TLGDFGFIYFYSLTLALLIVFAIFQKSIPKELEVAFTRHSGHSVVFDELKDDNHKQ"
     gene            complement(1871..2326)
                     /locus_tag="RPW04_001161"
     CDS             complement(1871..2326)
                     /locus_tag="RPW04_001161"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295253.1"
                     /translation="MKFKNLIIFYVFLDAVLILVMATFGYIYLLNSQVAFICSTFILF
                     TSYYGYKKRINEKSINYQLSAQEKSFFDDNEEDDNDLDIKEIKKKAKFKKMDIVGAFK
                     PYRLLGYITLILAFFMLLRRELFEPFSFLLGLVLMPLGVFLAGVFTRGK"
     gene            complement(2316..2603)
                     /locus_tag="RPW04_001162"
     CDS             complement(2316..2603)
                     /locus_tag="RPW04_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018060714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HDX6295254.1"
                     /translation="MSEKSNRATNINKAIRAADGLSLGISMVVAVIMGFGIGWGLKLL
                     SGSNWGLGIGIFIGVAAAINNVYKAYKSQIKSYEEFKNKPSPNFKDDDDEI"
     gene            complement(2600..3871)
                     /gene="hemL"
                     /locus_tag="RPW04_001163"
     CDS             complement(2600..3871)
                     /gene="hemL"
                     /locus_tag="RPW04_001163"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDX6295255.1"
                     /translation="MTNKNAFLEAKTYIPGGVDSPVRAFGSVGSDPVFIDHGNGEFLY
                     DIEGNEYIDYVLSWGPLIFGHCDSDIEEAVIKTAKKGLSFGAPCLLETALAKLVLSKF
                     PWLGKIRFVSSGTEATMSAIRLARGYSKKNGIIKFEGCYHGHSDSLLVKAGSGATTFG
                     YSSSLGVPEDIVKNTHIAIYNDIQSVEQCFKNEDIGVIIVEPIAGNMGLVPADQVFLD
                     ALRKLCDEYGAVLIFDEVMSGFRASATGSYEFNKIQADIITFGKVIGGGMSAAAFAAK
                     NEIMEMISPLGGVYQAGTLSGNPVAMAAGLASLSKIYNSPNLYKDLENKSKFIVEALE
                     NSAKKAGIALQTEVRGSMWGYFFNDRPVKNYKDALNSDTKMFAKFHAQMIKRGIYLAP
                     SQFETGFVCDKLSQKSLEKTANAIEESFKAL"
     gene            complement(3868..4224)
                     /locus_tag="RPW04_001164"
     CDS             complement(3868..4224)
                     /locus_tag="RPW04_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDX6295256.1"
                     /translation="MKFFYIFLMSFSFLMAEEFITKLEYAKMLYQNPRGIGCNKCHGE
                     KGEGSLIVKYKNLDRKNNVYVEKSLIAPRINNLDFDKFKSAVKESKGIMPSYFLTDNE
                     ILNLYEYIKTFNKENK"
     gene            4303..5154
                     /gene="folD"
                     /locus_tag="RPW04_001165"
     CDS             4303..5154
                     /gene="folD"
                     /locus_tag="RPW04_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010402657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDX6295257.1"
                     /translation="MQIIDGKSVSAKVKEYVKNEAISLKKSGITPTLAVILVGEDKAS
                     QTYVASKEKACLACEMGSVMHRLSKETSQSELLALIEVLNLDDSIDGILVQLPLPKHI
                     DTNRVLEAIDPTKDVDGFHAVNVGKLSSGLDGFVPCTPLGIMELLKEYDVNLQGIDAV
                     VIGRSNIVGKPMASLLLNAGATISIAHSKTKNLPEITRRAKLVVVAVGRPNFLNADMV
                     SDGAIVIDVGINRLDSGKLVGDVDFDSVAPKCSLITPVPGGVGPMTIAMLLSNTLKSA
                     KNRKRNV"
     gene            5151..6008
                     /gene="lepB"
                     /locus_tag="RPW04_001166"
     CDS             5151..6008
                     /gene="lepB"
                     /locus_tag="RPW04_001166"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDX6295258.1"
                     /translation="MKKFLSKAYNFSSSWTGTIIIVLLFIFFVAQAFVIPSGSMKNTL
                     LIGDHLFVKKFAYGVSTPHIPFLEVPVWFDSDGDGHIIEGSKPKRGDIVVFRYPGDPK
                     IYYVKRNFANGGDEVIFAPKTMYLRPSGGDAQIEENYNKNDIVTLLGKKFVKEPYKFK
                     GIHYENRGEKDNFAGQSADTFTIALYYLNQNKFAMTPALIQELPSVDGLPFNAFYFKV
                     PENEFFMVGDNRENSNDSRFWGSVPYKYIVGKPWFVYFSWDKEYKVRWERIGRLASTL
                     ETDETLIHE"
     gene            6001..6645
                     /locus_tag="RPW04_001167"
     CDS             6001..6645
                     /locus_tag="RPW04_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HDX6295259.1"
                     /translation="MSNFDAPTIITLVVVLIISVVGHEIAHGFVAFKFKDNTAKNAGR
                     LSINPLKHIDILGTIVVPSLMYLAGGVLFGWAKPVPINTYTVIKNGGYFGAICVSLAG
                     IVYNFLLALASFLLIYFGIAPEFGLRAISMLLTINLILGIFNLYPIPPLDGSHALSYV
                     LRIFKFEKLANLYQSLSRYGFIILVILIISPVASYVFSPIYTILDLVRTMLISR"
     gene            6700..7146
                     /gene="rpiB"
                     /locus_tag="RPW04_001168"
     CDS             6700..7146
                     /gene="rpiB"
                     /locus_tag="RPW04_001168"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HDX6295260.1"
                     /translation="MKVAQIFIASDHAGFDTKEFVKSYLSNFEFDVVDLGAYSKDMSV
                     DYPDFADKMAENINNDFKFGILICGTGIGISIAANRHPHIRCALCHDATTAKLAREHN
                     DANVLCFGGRIVGTSIIQDMVKVFFTTEFAGGRHEKRVYKLGNYKC"
     gene            7140..7472
                     /locus_tag="RPW04_001169"
     CDS             7140..7472
                     /locus_tag="RPW04_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295261.1"
                     /translation="MLVDWLFYTFLICFSIYLVVMVFYYKTLLRKERSMRDFMKNNLD
                     DTEIVIRKLQVQLQRSLGNIDILTDELNKIKSDVTSLRTRNSQYRIENDKLRLRIKEL
                     EGKIEALL"
     gene            7486..8034
                     /gene="apt"
                     /locus_tag="RPW04_001170"
     CDS             7486..8034
                     /gene="apt"
                     /locus_tag="RPW04_001170"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDX6295262.1"
                     /translation="MKELSKFDKEYLLGTIRDIKNFPKPGIIFKDITTLLGNAKAFKF
                     LLDHLEDRYKDENLDFIVGIESRGFILGAALSARLNLGFVPVRKPNKLPYITISQKYS
                     LEYGFDEVEMHIDAFDSIKNPKVLLVDDLIATGGTAKASSQLLKKLGVNLVEACFLVD
                     LVELGGSKELKSECPVYSVLEV"
     gene            8037..8648
                     /locus_tag="RPW04_001171"
     CDS             8037..8648
                     /locus_tag="RPW04_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDX6295263.1"
                     /translation="MEETLKHILFEYKNWAYLIIFAWCIMEGEIALILAGILAHEGHV
                     NLAMIVFIAGIGGFVGDQIYFYIGRYNKKYIQKKLVKQRRKFAVAHLLLGRYGWPIIF
                     IQRYMYGFRTIIPMSIGITRYSAKKFAFINLLSAWMWAAITILLAWYFGQQIWNAIHW
                     AEAHWYFAIPIIILFLTALILGFKQLEKNILNERKKRHEIHNN"
     gene            8629..10101
                     /locus_tag="RPW04_001172"
     CDS             8629..10101
                     /locus_tag="RPW04_001172"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HDX6295264.1"
                     /translation="MKFTIIEKPLDDIKADYEIIFVVNKDLNHKFIKDGDEFDFFKFK
                     GENVLNLTTLRRIYVGIKDLEPNSIRLGVSNAYNALKDLNLKTIKMASYVGCCFKMSF
                     QAIGEGFLLGSYKFDKYKTEKKESSISEIYISTDEFSGKQIALFEANLGLQHAQIIAE
                     STNYAKDIVNEIPDIYTPQKMAEDAKKLSLSYPSIECKIHDENYIKSQNMNAFLAVNR
                     ASMHPPRLIHLKYTPKDNSLKKVVFVGKGLTYDSGGLSLKPSDYMLTMKSDKSGAAAA
                     MAIIMGAARMGLPFEIHAVLGATENMIGGNAYKPDDVLITRSGVSVEVRNTDAEGRLV
                     LADCLDWAQSELKPDLLIDMATLTGACVVGLGEYTTGIMGNNYELQNEFKNFTKKSGE
                     FLTILEFNDHLRELVKSQIADISNTSSSRYGGAITAGIFLDKFIKDDYKDKWLHLDIA
                     GPAYTEKAWGYNQSGATGAGVRANLYYLVKLARNAEKGCK"
     gene            10101..11204
                     /gene="ychF"
                     /locus_tag="RPW04_001173"
     CDS             10101..11204
                     /gene="ychF"
                     /locus_tag="RPW04_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDX6295265.1"
                     /translation="MGLAVGIVGLPNVGKSTTFNALTKASNAESANYPFCTIEPNKAI
                     VPVPDIRLNELAKIVNPNKIQHSTIEFVDIAGLVKGASKGEGLGNKFLSNIRETEVIL
                     HMVRCFDDSNITHVENSIDPIRDIEIIETELILADIEQLNKKIEKLNKEAKAGAKGAK
                     ESLECASKLLEHLNAGNSASSFELFDSDIFNNLNKELRLLSAKEVIYGANVSEDDISN
                     DNEYVKMVKEYASHSNHEVIKLCAKIEEELISLDDNEAHEMLESLGAKQSGLESIIKT
                     AFAKLNLISYFTAGVVEVRAWTIHKGWKAPKAASVIHNDFERGFIRAEVISYDDYVAC
                     GGESKAKEAGKMRLEGKEYIVNDGDVMHFRFNV"
     gene            11416..12144
                     /locus_tag="RPW04_001174"
     CDS             11416..12144
                     /locus_tag="RPW04_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDX6295266.1"
                     /translation="MVQLENVNKYFGNFQALKDINLTVKEGEKLVIIGPSGSGKSTAI
                     RCINGLEEITSGRVIVDGKELNKKTKLEICRQNVAMVFQHFNLYPHMTVLQNLTLAPI
                     KLRKKSKEEANEIAYRYLKVVGLENKANVYPSTLSGGQQQRVAIARSLCTQKKIILFD
                     EPTSALDPETIQEVLDVMIKISGEKSTTMVVVTHEMGFAKQVADRVIFMENGTILEEA
                     VPNEFFNSPKNKRTEIFLSKILKH"
     gene            12160..12954
                     /locus_tag="RPW04_001175"
     CDS             12160..12954
                     /locus_tag="RPW04_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDX6295267.1"
                     /translation="MNKFVKGLLILGTGLVFAACSSNTSSDSKEANSNLENIKSKGIF
                     TAGVKDDVPGFGLLNKQTGKIEGFEIDIAKLLSKHILGDENKVKLVSVTAKTRGPMLD
                     NGTLDAVIATFTITDERKKTYDYTTPYYKDAVGLLVRKDGGVNTLKDLEGGTIGVSMS
                     STSKKSILEAAKNLGIELKFNEYPDYPSIKAALDAKRIDAFSVDKSILLGYIDDNSVI
                     LDESFAPQEYGIATRKNDPEFSKYVDEFVIANKSQIDELAKKWGLK"
     gene            12954..13643
                     /locus_tag="RPW04_001176"
     CDS             12954..13643
                     /locus_tag="RPW04_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDX6295268.1"
                     /translation="MDSLSPFALWKWEDTLAHWQMFASGLGFTLGVSILALILAGVIG
                     VISGMMATGKIAILRYCSRIYVEVFQNTPLVIQLFFLYFALPPMGINLDVFTIGVLGI
                     GAYHGAYMSEVVRSGINSIPKGQFEAATSQGFSYIEQMMYIILPQSIKIILPPATNQA
                     VNLIKNSSVLLIIAGAELMYMSDSYASDSLNYATSYSVAGILYFIMCFPLAMWARNYE
                     EKLKNAHLTRN"
     gene            13646..14308
                     /locus_tag="RPW04_001177"
     CDS             13646..14308
                     /locus_tag="RPW04_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDX6295269.1"
                     /translation="MEAVLNYINLKNLLYGLSLTLIMAFFAAVGSIIFGSILAVMRNY
                     GNKFIRGIAGAYVEIYRNTPLLLWMYAGCFVLPTIFSFLQGFSYAVLGTIGLFLYTSS
                     VMSEIIRGGLNSIPKGQFEAAASQGFGFFYTLYKIIFPQTIKKATPAILSQVITTVKD
                     TSFMAGLGVYELTNQSKLILASLKEFSHILAVIGLVAAMYFIVCFSLSIIVRYYNTRT
                     TY"
BASE COUNT         4891 a         2209 c         2640 g         4744 t
ORIGIN      
        1 ttcgcatgag tgtctataag acctttaaaa tttgaagttt ggattatttg ttgattttta
       61 tcttttgcat tttgcaatat attttttaaa ttttcaaaat tttttgctat atccgtactt
      121 tcatcctttg ctaaatttaa aaaactattt tcaagctgct tatttgaaac atttttcata
      181 agacttaaaa gctcttttat acttgtgggc agagtttgag ggtttaaact ttgagctatt
      241 ttagcttcta acataatgcc cgtatctttt atggtttgag ccatatttgt attttttata
      301 tgctcaacag gttttaaaaa ctcatctagt ttatttgcaa gttttataag agacggttct
      361 gattttagtg cttttgatag ttcgtttaga tcttttgcta aatttggagc cacttgagcc
      421 atcttgactt cagctaaaat ttttggctta tatccgccct cttcattgct tgcttttaaa
      481 gcgtttagta gtttgttagt tagtttattt aattctaaat caagctttga aagaggtata
      541 tctgcgtttt gtatgacgtc ttttttaaat atagttttag acgagatctc tgatttgagg
      601 tcttttttct cctctttttt ctcgtctttt tgggtaattt gggactgagc ggcttgatta
      661 ttgtttgtga ttatcatctt ttaactcatc aaaaactacg ctatgaccgc tatgtcttgt
      721 aaatgcgact tcaagttctt ttggaattga tttttgaaat attgcaaata ctatcagcaa
      781 agcaagcgtt aaactataaa aatatataaa accaaaatcc ccaagcgtat ttatcgcaaa
      841 tccgattata agtggagaaa aaaatgatcc taaaagatag ctaaataaca gcgctcttcc
      901 gacttctacg catctgcttt tatcttctat aacatcattt gctctagcaa gagctagtgc
      961 atataatacg aaaattccta tacctaaaaa aaatgcaaaa atatattgaa tatttataga
     1021 cggttttata actataaata aaagtgaaga gataagtgct atacaagagg ctaaaataat
     1081 ggcaaatttt cttccaaatt tatccgataa aactccaaaa aacatatgtg ataaaaatcc
     1141 accgcacata gatgaaacta taaatacgcc ggcttctttt gcactatatc cttgagctag
     1201 tataaataga gcagacatgg aaaaaaatcc atttataaga agtcctgcta ctatgctagt
     1261 tgctaaggcc agaggagcta taccgtaaat tttaggtagg ctaatatttg cagtttgggg
     1321 aatttgcggt gaccttactt ttaaaaaatt aagaggaatg gaacctagta taataaatat
     1381 agttcctatt aaaaatactt ttgtagcatc taaattcaga ctcataataa tagctcctag
     1441 accaaagcag ctgtaaaata taatctcata aaacgctaaa actcgtgatc taatagagtt
     1501 tgcggttttt gcatttagcc agctttctat taccattact atactataat aacaaaatcc
     1561 gagcataaat cttaaaaaag cccaaactat aagattgctg cttaaatcat gcaataaagc
     1621 tgaaatagca aaaattgcag taaatatagc ataagctctc atatgaccga cttttgaaat
     1681 aagtctatga gaaactaccg tgcaagtaag cgctcctatg aaaaaaaacg atgttatcac
     1741 tccgatcatc gttttatctg cattcatact agtaaggagc acaccagcag aacttactac
     1801 taaaccgttt gcaataaaaa tgaatgacat tccaaaaaat agcgcactta gcgatattat
     1861 aactcttttg ctacttacca cgtgtaaaaa ctccagctaa aaatactcca agaggcatca
     1921 aaactagccc taagaggaaa gaaaacggct caaataattc tcttcttaga agcataaaaa
     1981 atgctaaaat aagagtaata tatccaagca gcctatatgg tttaaatgct cctacaatat
     2041 ccattttttt aaatttagcc ttttttttga tctcttttat atctaaatca ttatcatctt
     2101 cttcattatc gtcaaaaaat gatttttctt gcgcacttaa ttgataattt atagattttt
     2161 cattaattct ttttttgtat ccgtaataac tagtaaaaag tataaaagta gaacagataa
     2221 aagctacttg cgaatttaaa agataaatat atccaaacgt tgccataact agtatcaaaa
     2281 cagcgtctaa aaaaacataa aatataataa gatttttaaa tttcatcatc atcgtcttta
     2341 aaattcggtg atggtttgtt tttaaattcc tcatagcttt taatctgcga tttgtaagct
     2401 ttatatacgt tatttatagc tgctgctacg cctataaaaa tacctattcc aagtccccag
     2461 ttagagccgc ttaatagctt caaaccccat ccaataccaa atcccattat cacagctaca
     2521 accatagaaa taccaagact taacccgtct gctgctctga ttgctttgtt tatgtttgtg
     2581 gctctatttg atttttcact cataacgctt tgaaactttc ttctatcgca tttgctgttt
     2641 tttctaggct tttttggcta agtttatcgc atacaaatcc tgtttcaaac tgactaggag
     2701 ctagatagat gccgcgcttt atcatttgtg cgtgaaattt agcaaacatt ttcgtgtccg
     2761 agtttaatgc gtctttatag tttttaacag gcctatcatt aaaaaagtat ccccacatag
     2821 atcctctaac ttcggtttgc aaagctatac ctgctttttt agcactattt tccaatgctt
     2881 ctactataaa tttggatttg ttttctaaat ctttatataa atttggagag ttatatattt
     2941 tgcttagcga tgcaagtccg gctgccatgg ctactggatt tccgcttaaa gttcctgctt
     3001 gatatactcc tccaagcggg cttatcatct ccattatctc gttttttgcc gcaaacgccg
     3061 cagcactcat tcctccgccg attactttac cgaaagttat gatatcggct tgtattttat
     3121 taaattcata gcttccagta gcgcttgctc taaatccgct cataacttca tcaaatatca
     3181 aaaccgcgcc gtactcatca caaagttttc taagcgcatc tagaaatact tgatctgctg
     3241 ggactaatcc catatttcct gcgatcggtt ctactatgat aactcctata tcttcatttt
     3301 taaagcattg ctctacgctt tgaatatcgt tgtaaatagc aatgtgcgtg ttttttacga
     3361 tatcttcagg tactccaagt gagcttgaat atccaaaagt cgtagctccg ctaccggctt
     3421 ttactaataa actatcgctg tgtccgtggt agcagccttc gaatttaata ataccgtttt
     3481 ttttgctata tccacgagcc aatcttattg cactcattgt agcttctgtt ccactgctta
     3541 caaaacgaat ttttcccaac catggaaatt ttgataaaac aagttttgca agagctgttt
     3601 caagcagaca cggagcacca aagctaagtc cttttttcgc agttttgata acagcttcct
     3661 ctatatccga gtcgcaatga ccaaatataa gaggacccca gctaagaaca taatctatat
     3721 actcatttcc ttcaatatcg tataaaaact cgccattgcc gtgatctata aaaacaggat
     3781 ctgaccctac cgatccaaaa gcccttacag gagaatcgac accgcctggt atatatgttt
     3841 tagcttctaa aaaagcattt ttattagtca tttgttttcc ttattaaaag tttttatata
     3901 ttcgtataaa tttagtatct cgttatctgt taaaaagtag ctcggcatta taccttttga
     3961 ctctttgact gctgatttaa atttatcaaa atcgagatta tttatccttg gagcaataag
     4021 tgatttttct acgtaaacat tgtttttcct atctaaattt ttatatttta ctatgaggct
     4081 tccctctcct ttttcaccgt gacatttatt gcatccgatg ccgcgtggat tttgatatag
     4141 cattttagcg tattctaatt ttgttatgaa ctcttcagcc attaaaaaac taaaagacat
     4201 taaaaaaata taaaaaaatt tcatctaaaa tcacctgagt ttaatttgaa ttttgatatg
     4261 atacaatttt tgtaataaaa aaagtataaa aaaggatgaa ctttgcagat catagatgga
     4321 aaaagcgtaa gtgcaaaagt caaagaatac gtaaaaaacg aagcaataag cttaaaaaaa
     4381 tcaggtataa ccccaacatt agcagtaatt ttagtaggag aggataaagc cagccaaaca
     4441 tacgtcgcaa gtaaagaaaa agcttgcctg gcttgtgaaa tgggttcggt gatgcatagg
     4501 cttagtaaag aaactagtca aagcgagctt ttagctctta tagaggtttt aaatttagac
     4561 gatagcattg atggtatttt agttcagctt ccattgccaa aacatataga cacaaacaga
     4621 gtgttggaag ctatcgatcc gactaaggac gttgacggat ttcacgctgt aaatgttgga
     4681 aaactctcaa gcggacttga tggattcgtg ccttgcactc cgcttggcat aatggaactt
     4741 ttaaaagagt atgacgtaaa tttgcaaggt atcgatgcag tcgttatagg aagaagcaat
     4801 atagtcggaa agcctatggc gagccttctt ttaaatgctg gagcaactat aagcatcgct
     4861 cattctaaaa ctaaaaatct ccccgaaata accagacgtg ctaagcttgt agtagtagca
     4921 gtcggaagac caaatttctt aaatgccgat atggtgagcg atggcgctat agtcattgat
     4981 gtaggcataa atcgtttaga tagtggtaag ttagtaggcg acgtggattt tgatagtgtt
     5041 gctccaaaat gctctctcat cacgccggtt ccaggcggcg ttggacctat gactatcgct
     5101 atgcttttaa gtaatacatt aaaatctgct aaaaatagaa agcgcaatgt atgaaaaaat
     5161 ttctttctaa agcttataat ttttctagca gttggaccgg gactataatt atagttttgt
     5221 tgtttatatt ttttgtcgct caagcttttg ttataccaag tggttctatg aaaaatacgc
     5281 ttcttatagg tgatcattta tttgtaaaaa aatttgctta tggcgtctct actccgcata
     5341 ttccgttttt agaagttcct gtttggtttg atagtgacgg agatggacat ataatagaag
     5401 gaagtaagcc aaaacgtgga gatatcgttg tttttagata tcccggagat cctaaaattt
     5461 actatgtaaa aagaaatttt gcaaatggcg gcgatgaggt gatatttgca ccaaaaacta
     5521 tgtatttaag accttctggc ggtgatgctc agatagaaga aaactataat aaaaacgata
     5581 ttgttacact acttggtaag aaatttgtta aagagcctta taaatttaaa ggtattcact
     5641 atgaaaatag gggtgaaaaa gataattttg ccgggcaaag cgcagataca tttaccatag
     5701 cgctttatta tctaaatcaa aataaatttg ctatgactcc agcacttatt caggaacttc
     5761 cgtccgtgga cgggcttcct tttaatgcat tttactttaa agttccagaa aatgagttct
     5821 ttatggtcgg agataataga gaaaatagca atgacagcag attttgggga agcgtaccgt
     5881 ataaatacat agttggaaaa ccttggtttg tatattttag ttgggataaa gagtataaag
     5941 ttagatggga gagaataggc agactcgcta gcaccttaga gactgatgag acgctgatac
     6001 atgagtaatt ttgatgcgcc tactataata acgcttgttg tagttttgat aatatctgta
     6061 gtaggtcatg agatagccca tggttttgtc gcttttaaat ttaaagataa tacggcaaaa
     6121 aatgcaggca gacttagtat aaatccttta aaacatatcg atattttagg tacgattgtg
     6181 gttccatcgc ttatgtattt agccggcgga gttttatttg gttgggcaaa acctgttcct
     6241 ataaatacat atacagtgat taaaaacggt ggatattttg gcgccatatg tgttagcttg
     6301 gcgggcattg tttataattt tttacttgct ttggcttcat ttttgcttat atatttcgga
     6361 atcgctccag agtttggcct aagagcgata agcatgcttt taactataaa tttgatatta
     6421 ggaattttta atctttatcc tataccgcct cttgatggat cacacgctct ttcttatgtt
     6481 ttaaggattt ttaaatttga aaaattagca aatttatatc aaagtcttag cagatatgga
     6541 tttataattc ttgtaatttt gatcataagt ccagtggcta gttatgtttt ttcacctatt
     6601 tatactattt tggatttggt tagaactatg cttatatcac gctaaattca ggtttttatg
     6661 atataattat gcgaaattta aaggttatgg gatgatttta tgaaagttgc tcagattttt
     6721 atagcaagtg atcacgctgg atttgatact aaggagtttg taaaaagtta tttatcaaat
     6781 ttcgagtttg atgtggttga tcttggagca tattctaaag atatgagcgt agattatcct
     6841 gattttgccg ataaaatggc tgaaaatata aataacgatt ttaaatttgg tattttaata
     6901 tgcggaacag gaataggcat atccatagcc gcaaatcgcc atcctcatat aagatgcgct
     6961 ctttgccatg atgctactac tgcaaaatta gctcgtgagc ataatgatgc aaatgtactt
     7021 tgctttggcg gcagaatagt cggaactagt atcattcaag atatggtaaa agtatttttt
     7081 actactgagt ttgccggtgg tagacatgaa aaaagagttt ataaattagg aaactacaaa
     7141 tgctagtgga ttggttattt tatacatttt taatatgctt tagcatatat ctcgtagtaa
     7201 tggtgtttta ttataaaact ttgcttagaa aagagcgctc aatgcgtgat tttatgaaaa
     7261 ataatcttga tgataccgaa atagttatca ggaaactaca agttcagctc caacgttcat
     7321 taggaaatat cgatatttta acagatgaac taaataaaat taaatcagat gttactagtc
     7381 ttcgtactag aaattctcag taccgtatag aaaatgataa attaagatta agaataaaag
     7441 agctagaggg caagatagaa gctctactat aaagtaagga taaaaatgaa agaactttct
     7501 aaatttgata aagagtatct tttgggtact ataagagata taaaaaattt cccaaaaccg
     7561 ggaattatat ttaaagatat aaccacgctt ttaggcaatg ctaaagcttt taaatttcta
     7621 cttgatcacc tagaagatag atataaagat gaaaatttag attttatagt cggtatagag
     7681 agcagaggat ttattttagg tgcggcactt agtgcgagac taaatttagg atttgtacct
     7741 gttagaaaac caaataaact tccttatata acaatttcac aaaaatatag cttggagtat
     7801 ggatttgatg aagttgaaat gcacattgac gcatttgata gcatcaaaaa tcctaaagtg
     7861 cttttggtgg atgatttaat agcaaccgga ggcacggcaa aagcctcgtc tcagcttcta
     7921 aaaaaattag gcgtaaattt agtagaagct tgttttttag tggatttagt ggaacttgga
     7981 ggaagcaaag agcttaaaag cgagtgccca gtttatagtg ttttagaggt ctaaagatgg
     8041 aagagacctt aaaacatata ttatttgaat acaaaaattg ggcgtatctt attatttttg
     8101 cttggtgtat tatggagggt gagatagctc tcatacttgc tggaatacta gctcacgaag
     8161 gacatgtaaa tcttgctatg atagtgttta tagccggtat aggcggattt gtgggagatc
     8221 aaatttattt ttatataggt agatataata aaaaatatat tcaaaaaaaa cttgttaagc
     8281 agagacgaaa attcgcagtt gcgcatctgc ttttaggacg atacggttgg cctataattt
     8341 ttatccagcg ttatatgtat ggatttcgca cgattatacc tatgagtatt ggtataactc
     8401 gttatagtgc taaaaaattt gcatttataa atttgctaag tgcttggatg tgggctgcta
     8461 taacaatact cttagcttgg tatttcggtc agcagatctg gaatgcgatt cactgggcag
     8521 aagctcactg gtactttgct atacctatca tcatactgtt cttaacagcg ttgattttag
     8581 gatttaaaca attggaaaaa aatatactaa atgaaaggaa aaaacgacat gaaattcaca
     8641 ataattgaaa aaccattaga tgatataaaa gccgattacg aaataatttt tgttgtcaat
     8701 aaagatttaa atcataaatt tataaaagac ggagatgagt ttgatttttt taaatttaaa
     8761 ggtgaaaatg ttcttaatct aacaacttta agaagaattt atgttggcat aaaagatctt
     8821 gagccaaata gtattagatt aggtgtttca aatgcttata acgcattaaa agatttgaat
     8881 ttaaaaacta ttaaaatggc tagttacgta ggatgctgct ttaaaatgag ttttcaggct
     8941 ataggcgaag gatttttgct aggtagttac aaatttgata agtataaaac tgaaaaaaaa
     9001 gagagctcta taagcgaaat ttatatttct actgatgagt ttagcggtaa gcagatagct
     9061 ttatttgaag caaatcttgg cttacaacat gctcagataa tagcagaatc tacaaactat
     9121 gcaaaagata tagtaaatga aatacccgat atttatactc ctcaaaaaat ggcagaagat
     9181 gcaaaaaagc tgtcccttag ttatcctagt atagagtgta aaattcatga tgaaaactat
     9241 ataaaatcac aaaatatgaa tgcattttta gcggtaaata gagctagtat gcatcctcct
     9301 cgtctaattc atttaaaata tactccaaaa gataacagtc ttaaaaaggt tgtttttgta
     9361 ggtaaaggct taacttatga tagtggcgga ctaagtttaa aaccgagtga ttatatgcta
     9421 actatgaaat cagataaaag cggtgcggca gctgctatgg cgatcataat gggagcagct
     9481 agaatggggc ttcctttcga gatacacgct gttttaggtg caactgaaaa tatgataggc
     9541 ggtaatgcgt ataaaccgga cgacgtgctg atcaccagaa gcggcgttag tgttgaagta
     9601 agaaacacgg acgcagaagg tcgtcttgta ctagccgatt gtcttgactg ggcgcaaagt
     9661 gagttgaaac ctgatcttct tatagatatg gcaactttaa caggtgcttg cgttgtcggt
     9721 cttggtgaat atactacagg gattatggga aacaactatg aactccaaaa tgagttcaaa
     9781 aattttacga aaaagagtgg cgagtttttg actattttag agtttaatga tcatttaaga
     9841 gaacttgtga aatctcaaat agcagatata agcaatacat cttcaagcag atacggcgga
     9901 gctataactg ccggtatatt tttagataaa tttataaaag acgattataa agataaatgg
     9961 ctgcatcttg atattgccgg acccgcttat acggaaaagg cttggggtta taatcagtct
    10021 ggagctactg gagctggagt gagagcaaat ttatattatc tggttaaact tgctagaaat
    10081 gccgaaaaag gctgcaaata atgggcttag cagtaggtat agtaggactt ccaaatgttg
    10141 gaaaatcaac gacttttaat gcgttaacaa aagctagcaa tgcagaatct gcaaactatc
    10201 cattttgcac tatagagcca aataaagcca tagttccggt tccagatata cgcttaaatg
    10261 agcttgcaaa aatagtaaat ccaaataaaa tccaacattc gactatcgaa tttgtagata
    10321 tcgcaggact tgtgaaaggc gctagtaaag gcgaaggact tggcaataaa tttctctcaa
    10381 atataagaga aaccgaagta attttacata tggttagatg ttttgatgac tcaaatatta
    10441 ctcatgtaga aaatagcata gatcctataa gggatataga aataattgaa acagagctaa
    10501 ttctagccga catcgaacag ttaaataaaa agatagaaaa attaaacaaa gaagcaaaag
    10561 ccggagcaaa aggtgccaaa gagagtcttg agtgtgcaag taaattacta gaacatttaa
    10621 atgcaggaaa tagtgcaagc agctttgagc tttttgatag tgatattttt aacaatctaa
    10681 ataaagaact caggctgtta tctgctaaag aggtgatata cggcgcaaat gtatcagaag
    10741 acgatatatc caacgataat gagtatgtaa aaatggtaaa agagtatgct tctcattcaa
    10801 atcatgaagt tataaagctt tgtgcaaaga tagaagaaga actgatctca ctagatgata
    10861 atgaagctca tgagatgtta gagagtttag gggctaagca aagcggtctt gaaagtatta
    10921 taaaaacagc atttgcaaaa ctaaatttaa taagttactt tacagccgga gttgttgaag
    10981 taagagcttg gaccatacat aaaggttgga aagcaccaaa agcagccagc gtcatacata
    11041 atgactttga aagaggcttt attcgtgctg aagttataag ctacgatgat tatgttgctt
    11101 gcggcggaga atctaaagcc aaagaggctg gaaaaatgcg tttagaaggt aaagaatata
    11161 tcgtaaatga cggcgatgta atgcatttta gatttaacgt ttaaccatat attaaggagc
    11221 ttttttaaat ttataaaagc tcctatgtta taaatttgac tcatattttt gaattctatt
    11281 attaaataca ctctttttat ataaattgtt actataagaa acatagatta aattatttta
    11341 ataaaatatt aaacaaatat aatatcatta atatttatgt gatatagtcg ttacataaaa
    11401 ttattggagt taaaattggt tcaattagaa aatgttaata agtattttgg caactttcaa
    11461 gcattaaaag atataaattt aacagtaaaa gagggcgaga aattagttat cataggtcca
    11521 agcggaagtg gaaaatcaac tgctattcgc tgtataaatg ggctagaaga gatcactagc
    11581 ggtagagtaa tcgtagatgg aaaagagtta aataaaaaaa ctaaacttga aatttgcaga
    11641 caaaatgtgg ctatggtatt tcagcacttt aatctttatc cgcatatgac tgttttacaa
    11701 aatttaactt tagcacctat aaaacttcgc aaaaaaagta aagaagaggc aaacgagata
    11761 gcttatagat acttaaaagt agtcggttta gaaaataaag caaatgttta tccatcgact
    11821 ttaagcggag gtcagcagca aagagttgcg atagctagaa gtctttgcac tcaaaaaaag
    11881 attattttgt ttgatgagcc gacttcggct ttagatcctg agactatcca agaagtttta
    11941 gacgtgatga taaaaatatc gggagagaaa tccacaacaa tggttgttgt cactcacgaa
    12001 atgggttttg caaagcaggt tgccgataga gttatattta tggaaaatgg aaccatttta
    12061 gaagaagcag tgcctaatga attttttaac agtccaaaaa acaagagaac agagatattt
    12121 ttaagtaaga tattaaaaca ctaatataag gagaaagaaa tgaataaatt tgtaaaaggt
    12181 ttgctgattt tgggcacagg acttgtattt gcggcgtgca gctcaaatac gagtagcgac
    12241 tctaaagagg caaattcaaa cttagaaaat ataaaatcaa aaggtatttt cacagccgga
    12301 gtaaaagacg atgttcctgg tttcgggctt ttaaataagc aaactggaaa gatagaaggc
    12361 tttgagattg acatagcaaa acttttatca aaacatattt tgggtgatga aaataaagtt
    12421 aaattggttt ctgttacagc aaaaacaaga ggacctatgc tagataacgg tacgttagat
    12481 gccgttatag ccacatttac tataacagat gagcgcaaga agacatatga ttatacaact
    12541 ccgtattata aagatgcagt aggtctttta gtaagaaaag atggcggtgt aaacactcta
    12601 aaagatcttg aaggcgggac aataggagtt tctatgagtt ctactagcaa aaagagtatt
    12661 ttagaagccg ctaaaaatct tggaatagag cttaaattta atgaatatcc agattatcct
    12721 tctataaaag ccgctcttga tgcaaaaaga atagacgcat ttagcgttga taaatctata
    12781 cttttgggat atatcgatga taatagtgtt attttagatg agagttttgc tcctcaagaa
    12841 tacggcatag ctactagaaa aaatgatcct gagttttcaa aatacgttga tgagtttgta
    12901 atagcaaata aatctcagat tgatgaattg gcaaaaaaat ggggtcttaa gtaatggata
    12961 gcctaagtcc atttgctttg tggaaatggg aagatacatt agctcactgg cagatgtttg
    13021 ctagtgggct tggctttact ttaggagtaa gcattttagc gcttatctta gctggtgtca
    13081 taggggtaat aagcggtatg atggctactg gaaaaatagc tattttacgc tattgttctc
    13141 gtatatatgt tgaagtattt caaaatactc cacttgtaat tcagctgttt ttcttatatt
    13201 ttgctttgcc tcctatgggt ataaatttag acgtatttac tataggagtt ttaggtatag
    13261 gcgcttatca tggtgcttat atgagcgaag tagtaagaag tggtataaac tccattccta
    13321 aaggtcaatt cgaagcagcc acgtcgcaag gttttagtta tatagaacaa atgatgtata
    13381 tcatattacc tcaatctata aaaatcatat taccgccagc cacaaatcag gcagtaaatt
    13441 tgataaaaaa tagctccgta cttcttataa tagcaggcgc ggaacttatg tatatgagtg
    13501 attcttatgc gagcgacagt ctaaattacg caacttcata tagtgttgct ggaattttat
    13561 attttataat gtgttttcca cttgccatgt gggctagaaa ttatgaagaa aagcttaaaa
    13621 atgcacattt gacaaggaat taataatgga agctgttcta aactacataa atttaaaaaa
    13681 tctattatat ggactaagtc ttacgctgat tatggcgttt tttgctgccg tagggagtat
    13741 tatttttgga tctattttgg ctgttatgag aaattatggg aataaattta taagaggcat
    13801 agcaggagcg tatgtggaaa tttatagaaa cactccgctt ctactatgga tgtatgccgg
    13861 atgttttgtt ttgcctacta ttttttcatt tttacaagga tttagttacg cagttttggg
    13921 tactatcggg ctatttttat atacgtcttc tgttatgtcc gagataataa gaggaggtct
    13981 aaactccatt cctaaaggtc aattcgaagc agccgcgtcg caaggttttg gcttctttta
    14041 tactctttat aagataattt ttccacaaac aatcaaaaaa gcaactccag ctatattatc
    14101 ccaagtaata accacagtaa aagacacgtc ttttatggct ggactaggag tttatgaact
    14161 aacaaatcaa agtaagctca tactagctag tttaaaagaa tttagccata tactcgctgt
    14221 tataggtttg gttgcagcta tgtattttat agtgtgcttt agcctatcta ttatagttag
    14281 atattataat actagaacta cttattaata agccaatggc ttattaaatt tttaattata
    14341 aattgtttct taatttatta ctgaaatata aaaatatttt ttaaattttt taattaaatt
    14401 tgcttaaagt atgctataat agtgttatat atttttttaa ttttattatt ttattttgat
    14461 agctggtatt aagatatatt tttt
//
LOCUS       DAPPKW010000045        14271 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.045, whole genome shotgun sequence.
ACCESSION   DAPPKW010000045 DAPPKW010000000
VERSION     DAPPKW010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 14271)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14271)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14271
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.045"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            8..1903
                     /locus_tag="RPW04_001178"
     CDS             8..1903
                     /locus_tag="RPW04_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005869333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HDX6295270.1"
                     /translation="MLFILLIPFTVLFANYEKEAKSIEEIFTQVIELYKNGKDTEARE
                     LTQTAYFGHFENLEGGIRINLGQKKAYSMEKQFGDIRKAIKAGQDVAKIEAMIANLNT
                     EIKEVLPTISSGVKLQAQKSDDGGLAAAGMSSSVLESNPWGSVYENIKSSLDDAILAY
                     DKKDGEALKNAMNKAKFNYYRNMELEIAVRRYATQRLDQMIQQIMGNVISENVNMQKN
                     AFEQSIKDIDELISSAINKLPEESYVLAPKIEVEEKKVVDFTPTVQNIKDKMQNVLSL
                     YKSGSIKEAISEAGDIYFDEYEASGMESKIGAIDITLKTATEASFSKIVSLMKSGVSS
                     DKVSAEQYNLFSLLETSLEKSSTDLSGWALFIYALSIILREGFEALIIISAVVAYLIK
                     TGNSKHLNIVYSSMIVAILLSFATAWAVNLIFGSNMAAQSREIIEGVVMLIAVGLLFY
                     VGFWLLSNAGAKKWNHYIQGHITSSLTSGDSKALWWTLFLAVYREGAETVLFYQALIF
                     DARSNGALGMVGLGFVAGIVILFILYFIIKAFSLKIAIKPFFIATSAIIFYMSIVFVG
                     KGVMELVEGKLFVPNVIESIPTITWLGIYPYYESLIPQFLMILALIIGVYIIKQKQIN
                     LNKGEQV"
     gene            1900..2421
                     /locus_tag="RPW04_001179"
     CDS             1900..2421
                     /locus_tag="RPW04_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron transporter"
                     /protein_id="HDX6295271.1"
                     /translation="MKKILSGMLALSLAAVITMAAEQPIGEPIEKNGMEIAAVYLQPI
                     DMEPKGIDLAPSLADIHLEADIHAIKGNANGFGEGEWVPYLKIAYTLKNIDNGKTLQG
                     TLMPMVASDGPHYGANLKMTAGVGNYELTFHIDNPSTQGFGRHADKATGVAKWWAPFD
                     AKYTFKYTGAPKE"
     gene            2594..3958
                     /locus_tag="RPW04_001180"
     CDS             2594..3958
                     /locus_tag="RPW04_001180"
                     /inference="COORDINATES: protein
                     motif:HMM:NF016811.1,HMM:NF021587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2318 domain-containing protein"
                     /protein_id="HDX6295272.1"
                     /translation="MAIFFYQVVLALFGFSFIISFLDVKEHIKNIFLPAVVGIFVGFI
                     LFGITKFAIIADDVKLFFDTLCLVALVLFLFCFKFKNSYVISLTVFLLAVGYGFDYRY
                     ISMNFTIFAGEILDSLSLSNLFLICFALVVLLLAYFILRSVLSLVCKSVRLFFAIFST
                     VILIVDRAGFLTLGLMQNGAVPTYSNTLSVVAKIVYFDSFLPIVFSLFLAILALFSLS
                     KLPKKALYKDIVEFRIINAARTQGFRNAFFAWLLGAIIVCFSLFYILVSSRPPSISTP
                     IIVEPINGEFKFDAAALLDGKLHRYAYITDDGHEVRFFLINRFKDKLAPVAVFDACAI
                     CGDMGYIKSGDNLICISCNVRIFLPSVGKAGGCNPIPFDYKYDGKNVTIGLQEIQKGA
                     TFFSKIVEKKVVDPVSKKEISNSSKFNYIYYGRTYFFENHDNQMLFEENPENYVTTSG
                     ELKE"
     gene            3963..5207
                     /locus_tag="RPW04_001181"
     CDS             3963..5207
                     /locus_tag="RPW04_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDX6295273.1"
                     /translation="MFLNLIKSSITGSKESKILAFITIFLSVSLIACMLNITLKIGDE
                     VAKELRSYGSNIVVLPKSDSLNIEIAGKNYSPLKNEDYLKESDLHKIKEIFWRNNITA
                     FAPFLTAKAGNYDIVGTYFSKDANVEGEPDFRSGVESLYPFWIVDGRYPIDDSLDEVL
                     AGEKLGLKVGDVLNLNNYSVKVVGVLKGAQDESAKLVTSLKLAQNIANKPNLINKAEV
                     AAMTIPENDLSLKARRDLESLDSVAYDKWYCSAYVSSIAYQISEEYPNASAKAVLSVS
                     EAQSGITKKIQNLMGVVSVISLIVSSIAITSLMSSEIHRRKKEIGLLKALGASGFIIY
                     AQFAAEVFIVCIAASLLGSLAGYALSFIIAYQIFGSFIGVSFMVLPISIVFGMLICIL
                     GGILPLRSVINLLPAEVLYGRK"
     gene            5194..6324
                     /locus_tag="RPW04_001182"
     CDS             5194..6324
                     /locus_tag="RPW04_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDX6295274.1"
                     /translation="MVENRAFFRKIIFKSIANSAVRSFVIFISILLGSAVCAAFINIY
                     ADIDKKVTSELNSYGPNVIISPLSLENGYIKMADLDAKLSGIKELKAKNEYLFGSVNI
                     GVTRAVIMGVNFSNLKEIMPFLDIKSGEFINIDFDDKNALIGEDLAKLTGVKVGDIIE
                     ISSPNSNEVYKVRIKGIVYDGQKEDSLLLISLSLAQEILDKPNLINYAEAAISGSYDS
                     IKSLCSSLSTSEFKFEVISKVSKAQGQILDKIKLLMALIGVTILFITSVCINTSLSSI
                     LLSKIKEFALIRAIGASKRDVLKIIFSEILVISIAGSFLGALVGYLLAIFLGNLIFSS
                     GVDFRFVSLVVSVILSLVFAFIASYYPVKKALNQNLADLLRE"
     gene            6327..6989
                     /locus_tag="RPW04_001183"
     CDS             6327..6989
                     /locus_tag="RPW04_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6295275.1"
                     /translation="MEVLNLKNISKYFNEVKALDDINFSVNKGEWISIMGPSGSGKST
                     FVNILSLMDSPTCGELILGGENASHLNDDQILEFRRKKIGLVFQQFHLIPYLSAIQNV
                     MLSQYYHSCIDKTSAKKALEKVGLAHRISHKPSELSGGEQQRVCIARALINDPDIIIA
                     DEPTGNLDEANEKIVLELFKELKNDGKTLLLITHNEELGRYADKVVYLKHGKLDRIEK
                     LQ"
     gene            6986..7483
                     /locus_tag="RPW04_001184"
     CDS             6986..7483
                     /locus_tag="RPW04_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDX6295276.1"
                     /translation="MKNIVFAAVFTLILAGCGSGLKHHMALNDKDGFDTIYDPALKEL
                     KIANWNEPYILFFFTTMCGACTAQVPALNELVKEYGSKIKVIGVMGNSLGFDGDMMAL
                     KDKGVEFMSVSTKKSVDYFSNIVGGIMGTPVTYVFDKNGKISKQFLGLYPKSALENEL
                     KLLLN"
     gene            7555..8526
                     /locus_tag="RPW04_001185"
     CDS             7555..8526
                     /locus_tag="RPW04_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase family protein"
                     /protein_id="HDX6295277.1"
                     /translation="MIQTYAEWDEQELLMLSIPHSNSDWKPYLNDILTSYEELISAVS
                     SYQKLLLIAPQKSDFDRFSKFKNVEFLEVLTNDTWIRDYGAIDVKCGLKTISYDFKFN
                     AWGGKFESSLDNDVNKKLFSHLKGELVSIPLILEGGSIEFNGDGVLLTTTSCLLNDNR
                     NSLSKNELEIRLKELFGLKKIIWLEHGFIKGDDTDSHIDTLARFISKDTIAYASCTDK
                     NDEHYLPLKEMENELKKTGFNLVPLELPKPVMFEGRRLGATYCNFIFVNGALIVPTYG
                     DKKSDELALSTLKQVLNLDIIGVDSTVFIRQNGSLHCSSQNRFKGDR"
     gene            8523..9398
                     /locus_tag="RPW04_001186"
     CDS             8523..9398
                     /locus_tag="RPW04_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDX6295278.1"
                     /translation="MRVYPPVVAGSVAVVLAIIKFAIGLASGSMAVLSSAIDSLLDCL
                     VSALNYFALRKSNSDPNSKFNFGYGKIEALVALFEGAFIIGIGIFICYSSVTKIINPE
                     KSIEVGAGMIVMIISIILTGALVFYLQREYKKTGNLIIKADALHYQTDLVTNAAILAA
                     LFAIWLSGYDIIDALFGIGISVYIVFSAFKLLKEGVYILLDGALPESMVSEIIDIINL
                     KHEVKSYHYLKSRISGEKYYFSVHLVFDPSISLSKAHSVADDIESEIRSKFNRHKWVF
                     DMHFDTEDDRDKEEL"
     gene            9395..10264
                     /locus_tag="RPW04_001187"
     CDS             9395..10264
                     /locus_tag="RPW04_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002866885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase"
                     /protein_id="HDX6295279.1"
                     /translation="MKVALVAHKFYGNKPDTIKRTTKLIEEAANKGAELIVLEELHQG
                     SYFCQDESVDSFELANDFESDIAYWAEVAHEFKIVLVTSLFEKRSAGLYHNTSVVFDN
                     DGRIAGKYRKMHIPDDPNFYEKFYFAPGDLGFEPIDTSIGRLGVLVCWDQWYPEAARL
                     MALKGAQILIYPTAIGWFDGDSEDEKSRQLEAWVAVQRGHSVANGLPVVTVNRVGFEA
                     APDGNGGIRFWGNSFVFGPQGEELFRSNSTDELADIVDIDIKRCEQVRRWWPFLRDRR
                     IDAYEGLLKRFID"
     gene            complement(10303..11517)
                     /gene="gltS"
                     /locus_tag="RPW04_001188"
     CDS             complement(10303..11517)
                     /gene="gltS"
                     /locus_tag="RPW04_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HDX6295280.1"
                     /translation="MQTINIDSYSTLVVMVLVLLLGSFVIKRVKFLQDYNIPEPVVGG
                     IIAAVLFLCLYVFANIHLAFDSSLKDPLMLAFFSSIGLLADFASLKKGGVKLVIFLFI
                     ISGLLILQNAVGIGVALGLGENPLIGLLGGSITMSGGHGTGGAWANEFIKAPYNFSAA
                     YEVAMASATFGLIAGGVIGGPVAKFLITKYKLKTPDTNVEDKSAILNFEQPGKEKLIT
                     QQSFIESLALISLCLLIGNFVSDYVKTLNVNFTLPTFVYCLFMGVILRNLLQAFKIHE
                     VFDREVSVIGNVSLSLFLAYALMSINLWQLVSLALPIVTILISQVALMVFYAIFITFR
                     FCGRDYDAAVLAAGHCGFGLGATPTAMVNMQTVTNHYGMSHMAFIIVPLCGAFFIDLV
                     NALIINGFLLFF"
     gene            complement(11609..12229)
                     /locus_tag="RPW04_001189"
     CDS             complement(11609..12229)
                     /locus_tag="RPW04_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDX6295281.1"
                     /translation="MATKTSSLKFGKFDVTINYKPVKYLRLKVAPNGDISISAPFFTS
                     KTNILNLLSKNENWLENTLAKIKPKDDKIKFLGNAYELKFDENIKEVLVLGTQILAPC
                     KAQFDKFLRLKAKEIFQKYIEFYQPKISKKVTHVSIKKMTSRWGSCNSKKGYINLNLN
                     LITKDERFIEYVVLHEMTHLLYPHHQKSFYDFIENLMPDFRARERL"
     gene            complement(12205..13479)
                     /locus_tag="RPW04_001190"
     CDS             complement(12205..13479)
                     /locus_tag="RPW04_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002946489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDX6295282.1"
                     /translation="MLLRTLTLIINTIMVAKVDVNLVGAMGAGNQIFNLFVTVFSFLS
                     VGCSVVVAQSLGARKINLATRAIHISLSFNGILGLICAAFIFLNTHKALELLQIPVGV
                     IEDSFKYLHILSLALFLEALGIVIAAIVRVKNYAFAIMLISVFMNILTIFGNAIALFG
                     LFGLPNFGLSGVAISTIFARGVGIILLMYVLVKIAKVHIFFGLFFKFSLDILSKILKV
                     GLPSAGENLLWIGQYMVAFSFVASMGETSLSVQTIYFQMSMFIFLAATSISLANEIII
                     GHLVGACEFDKAYKRAFKSLKIGALITWIVLFIFYLSREEIMNSLNLTEELKSIMRPL
                     FTLSLVLESGRTFNIIMVNSLRASGDARFPFIMGALFMWGVSLPIGYYLDIILEYGII
                     GVWIGFCVDEWARAFANTLRWRSKKWQLKRLV"
     gene            complement(13524..>14271)
                     /locus_tag="RPW04_001191"
     CDS             complement(13524..>14271)
                     /locus_tag="RPW04_001191"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012722.1,HMM:NF014567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDX6295283.1"
                     /translation="IILIYISYELSMYKTRQIKELLNKKDKKLKKQSVKIRLKNTQLE
                     NLLSGISHEFKNPISVIKMSAQTILDDDVSKEIRIKFINKIISNSDRLNNILNKLRIV
                     FGGDITPNLSVFDARKLCKEAISNLEQKYPDQKIKIIGEKSLKADYDMIYQVVLNLCE
                     NALKYSKKDVEILLNESGIFIKDAGEGIEEAELKLILKKFYKSQDYDWNSSLGLGLYI
                     VKLILKLHNFELIVSSQKCVGSTFGFKDKE"
BASE COUNT         4710 a         2151 c         2719 g         4691 t
ORIGIN      
        1 tcttaaaatt ctttttatat tgcttatacc ctttactgtt ctttttgcaa attatgaaaa
       61 agaggcaaaa agcatagaag agatatttac tcaagttata gaactttata agaacggtaa
      121 ggatactgaa gctagagagc ttactcaaac tgcgtatttc gggcattttg aaaatttaga
      181 aggcggtatt agaataaatc ttggtcaaaa aaaagcttac tctatggaaa aacagtttgg
      241 agatataaga aaagctatca aagcgggtca agacgtcgct aaaatagaag ctatgatagc
      301 aaatttaaat accgagataa aagaagtttt gcctactata agtagcggcg tgaagctcca
      361 agcccaaaag agcgatgacg gcggtttggc tgctgctgga atgagctctt ctgtcttaga
      421 gtcaaatcca tggggtagcg tttatgaaaa tataaaatct agtttagatg atgctatttt
      481 ggcttatgac aaaaaagacg gcgaagctct taaaaatgct atgaataaag ctaaatttaa
      541 ttattataga aatatggagc ttgaaatagc cgttagaaga tatgccactc aaaggctaga
      601 tcaaatgata cagcagatta tgggtaacgt gatatcagaa aatgtaaata tgcaaaaaaa
      661 tgcatttgaa cagtctataa aagatatcga cgagcttata agcagcgcta tcaataaact
      721 tccagaagag tcttatgttt tagctcctaa aatagaagta gaagaaaaaa aagtagtaga
      781 ttttactcct actgtgcaaa atataaaaga taaaatgcaa aatgtactgt ctctatacaa
      841 aagcggtagt ataaaagaag ctataagcga ggccggagat atatattttg atgagtatga
      901 agcaagcggt atggagagta aaataggggc tatagacatc acgcttaaaa ctgcaactga
      961 ggctagtttt agcaagatag tttctcttat gaaaagcgga gttagtagcg ataaagtatc
     1021 ggcagagcaa tacaatctat tctctttgct agaaaccagc cttgaaaaaa gtagtaccga
     1081 tcttagcgga tgggctcttt ttatatatgc gcttagtata attttaagag aaggatttga
     1141 agctctcata attatctccg cagtagtagc ttatcttata aaaaccggaa atagtaaaca
     1201 tctaaatatc gtctatagct cgatgatagt ggctatattg cttagttttg ctacagcgtg
     1261 ggccgtaaat ttaatatttg gctcaaatat ggctgcacaa agcagagaga taatagaagg
     1321 tgttgttatg cttatagcag tcggacttct attttatgtc ggattttggc tgcttagtaa
     1381 cgccggagct aaaaaatgga accattatat acaaggacac atcactagta gccttactag
     1441 cggagatagt aaagcgcttt ggtggactct atttttagca gtatatagag aaggagccga
     1501 aaccgtgcta ttttatcaag ctcttatatt tgatgcacgt tcaaacggcg ctcttggtat
     1561 ggtcggactt ggatttgttg ctggtatagt aatacttttt atactatatt ttatcattaa
     1621 agcgttctca ttaaagatag ctataaaacc atttttcata gctacttcgg ctattatatt
     1681 ttatatgtcg atagtatttg tgggtaaagg cgtaatggag cttgtggaag gaaaattatt
     1741 tgttccaaac gttatagagt ctattcctac tataacttgg ttgggaattt atccgtacta
     1801 tgagagtttg atacctcaat ttttgatgat actagctctt ataataggag tatatataat
     1861 aaagcaaaaa caaatcaatc ttaataaagg agaacaagta tgaaaaaaat actttcagga
     1921 atgttggcac taagccttgc agcagttatt actatggcag ctgagcagcc tatcggtgag
     1981 ccgatagaga aaaacggtat ggaaatagcc gctgtttatc ttcaacctat agatatggag
     2041 ccaaaaggta tagacttagc tcctagttta gcagatatcc atcttgaagc agatatccat
     2101 gctataaaag gaaatgcaaa cggatttggc gagggtgaat gggtgcctta tcttaagata
     2161 gcttatactt taaaaaacat agacaacggt aaaacactgc aaggaactct tatgcctatg
     2221 gtagcaagcg acggtcctca ctacggcgca aatttaaaaa tgaccgccgg agtcggtaac
     2281 tatgaactta catttcatat agataatcca agtactcaag gttttggacg ccacgcagac
     2341 aaagcaacgg gagttgcaaa atggtgggca ccgtttgatg caaaatatac atttaaatat
     2401 acaggtgctc caaaagagta atcaagcagt ttggcttaag tataaattta aaaagtccgg
     2461 ctgatttttg gctggatttt taaatttaaa agatctctgc ttgagtttta ataaattttg
     2521 cgccgtttaa aatgaactat aaaattgcgc aatttatcgg ctagtgattt tttaaattta
     2581 aaaaggtgct atgatggcga ttttctttta tcaagttgtt ttggctctat ttgggtttag
     2641 ttttataatc tcatttttag atgtaaaaga gcatattaaa aatatatttt taccagctgt
     2701 tgtcggtatt ttcgtcggtt ttatactatt tgggataact aaatttgcta ttatcgcaga
     2761 tgatgtaaaa ttgttttttg atacgctttg tttggtggct ctagttttat ttttattttg
     2821 ttttaaattt aaaaatagtt atgttatatc tttaaccgtc tttttactcg cagtcggata
     2881 cggatttgat taccgttata taagtatgaa tttcactatt tttgccggtg aaattttaga
     2941 tagtttgagt cttagcaatc tatttttgat ctgttttgct cttgtggttt tactgcttgc
     3001 atattttatt ttaagatctg ttttaagtct agtttgtaag tctgttaggc tgttttttgc
     3061 tatttttagc actgtgattt tgatagtgga tagagctgga tttttaactc ttggcttaat
     3121 gcaaaacgga gccgttccta cttactccaa tactctttcg gtggtcgcaa aaatagttta
     3181 tttcgatagt tttttaccta ttgtattttc actattttta gctattttag ctctttttag
     3241 tttaagtaag cttcctaaaa aagcccttta taaagatatt gttgagttta gaatcataaa
     3301 tgccgctaga acgcagggat ttagaaatgc tttttttgca tggctgcttg gagcgattat
     3361 agtatgtttt agtttatttt atatattagt atcttcaaga ccgccttcta taagtactcc
     3421 tattatagta gagccgataa acggcgagtt taaattcgac gctgcagctt tgcttgatgg
     3481 aaaactccat agatatgctt atatcaccga tgacggacat gaagttaggt tttttcttat
     3541 aaatagattt aaagataaat tagctcctgt tgctgttttt gatgcgtgcg cgatatgtgg
     3601 cgatatggga tatataaaaa gcggcgataa tcttatatgt attagttgca atgtaagaat
     3661 atttcttcct agcgtaggta aagcaggagg ctgcaatcct ataccctttg attataaata
     3721 cgacggcaaa aacgttacta taggtttgca agagatacaa aaaggtgcaa cattttttag
     3781 caaaattgtc gaaaaaaagg ttgttgatcc agttagtaaa aaagagattt caaatagctc
     3841 taagttcaat tatatttatt acggaaggac gtattttttt gaaaaccatg ataatcaaat
     3901 gctgtttgaa gaaaatccgg aaaattacgt tactacttct ggcgaattaa aggagtgaat
     3961 aaatgttttt aaatttgata aaatcttcta taacagggtc taaagagagt aaaatcctag
     4021 cttttataac tatatttttg tctgtttcat tgatagcttg catgctgaat ataactttaa
     4081 aaataggaga tgaagtagca aaagagttaa gaagttatgg ttcaaacatc gtagtacttc
     4141 caaaatcaga tagcttaaat atagaaatag caggtaaaaa ctactctcct ttgaaaaatg
     4201 aggattatct aaaagagagt gatttacaca agataaaaga gatattttgg agaaataata
     4261 taacagcgtt tgcaccgttt ttaaccgcta aagccggtaa ttacgatata gttggtactt
     4321 actttagcaa agatgcaaat gtagaaggag agccggactt tagaagcggc gtagaaagtt
     4381 tatatccgtt ttggatagtt gatggaagat atccgattga tgatagctta gatgaggttt
     4441 tagcaggaga aaagttaggt cttaaagtcg gagatgtttt aaatttaaat aactatagcg
     4501 taaaagtcgt tggagtttta aaaggagctc aagacgagag tgcgaaacta gttacgagtc
     4561 ttaaactagc tcaaaatatc gcgaataagc caaatttgat aaacaaagcc gaagtcgccg
     4621 ctatgacgat accagaaaat gatctttcgt tgaaggctag gagggatctt gagagtcttg
     4681 atagcgttgc ttacgataaa tggtactgct ccgcttatgt tagttctata gcttatcaga
     4741 tcagtgaaga gtatccaaat gcttctgcaa aggctgtttt aagtgttagc gaagctcaaa
     4801 gtggcattac aaaaaagatt caaaatttaa tgggagtcgt gagcgtgata tcgcttatcg
     4861 tatcaagtat agctattacg agtttaatga gtagcgaaat tcataggcgc aaaaaagaga
     4921 tcggtctgtt aaaagcactt ggagcaagcg ggtttatcat ctatgctcag tttgcagccg
     4981 aagtttttat agtttgtata gccgcttctt tacttggaag tttggctgga tatgctttaa
     5041 gcttcattat agcttatcaa atatttggaa gttttatcgg agttagtttt atggtgctgc
     5101 ctatcagcat tgtttttgga atgcttattt gtattttagg cggaatactt ccattaagaa
     5161 gtgttataaa tttacttcca gctgaggtgt tatatggtag aaaatagagc gttttttaga
     5221 aaaattatat ttaaaagtat agcaaatagc gcagttagaa gttttgtgat atttatctct
     5281 attttgcttg gaagtgctgt ttgtgcagct tttataaata tatatgcaga tatagacaaa
     5341 aaagttacta gcgagttaaa tagctatggt ccaaatgtta tcataagtcc gttaagctta
     5401 gaaaacggat atataaaaat ggctgattta gatgcaaaac taagcggcat taaagagtta
     5461 aaagctaaaa acgaatacct ttttggtagt gtaaatatag gcgttacaag agcggttata
     5521 atgggcgtta atttctcgaa tttaaaagaa attatgccgt ttttagatat aaaaagcggc
     5581 gagtttataa atattgattt tgatgataaa aatgcactta taggtgagga tctagcaaaa
     5641 ttaacaggcg ttaaagtcgg tgatatcata gaaataagct ctccaaactc aaatgaagtt
     5701 tataaagtta ggataaaagg tatcgtttat gatgggcaaa aagaggactc tttgcttctt
     5761 atatctttga gcttggctca agaaatttta gataaaccaa atttaataaa ctacgccgaa
     5821 gccgctataa gcggtagtta cgatagtata aaatctcttt gctcatctct tagtactagt
     5881 gagtttaaat ttgaagttat cagcaaagtt tcaaaggctc aaggtcagat attagataaa
     5941 ataaagcttt tgatggctct tataggagtt actattttgt ttataacatc ggtttgtata
     6001 aatactagtt taagctctat tttgctatcg aaaatcaaag aatttgcgct tataagggct
     6061 atcggagcta gcaaaagaga tgttttaaaa ataatatttt ccgaaatttt ggttattagc
     6121 attgctggat cgtttttagg agctttagtc ggctatttgt tggctatttt tcttggtaat
     6181 ttgatatttt ctagcggagt tgattttagg tttgttagtc ttgttgtttc tgttatttta
     6241 agtcttgttt ttgcatttat cgctagttat tatcctgtca aaaaagcgtt aaatcaaaat
     6301 cttgcagact tgttaaggga gtagaagtgg aagttttaaa tttaaaaaat ataagtaagt
     6361 atttcaacga agttaaagca cttgatgata taaattttag tgtaaataaa ggtgaatgga
     6421 tcagtataat ggggccaagc ggaagcggta aaagtacgtt tgtaaatata cttagtctta
     6481 tggatagtcc tacttgcggc gaactgatat taggcggtga aaatgcaagc catctaaatg
     6541 atgatcaaat tttggagttt agacgtaaga aaatagggct tgtgtttcag cagtttcatc
     6601 ttatacctta tctaagtgct atccaaaacg taatgttaag tcagtattat cacagctgca
     6661 tagataaaac tagtgctaaa aaagctttag aaaaagtcgg acttgctcat agaatctcgc
     6721 acaaaccaag tgagcttagc ggcggagagc aacaaagagt ttgcatagca agggctctta
     6781 taaatgatcc agatataata atagccgatg aaccgacggg aaatttagac gaggcaaatg
     6841 aaaaaatagt tttagagctt tttaaagagc ttaaaaatga cggtaaaact ctactgctca
     6901 tcactcacaa tgaagagctt ggcagatatg cagataaagt agtatatcta aaacatggaa
     6961 aacttgatag aatagagaaa ttacaatgaa aaatatagtt tttgcggcgg tatttacact
     7021 gattttagca ggatgcggaa gcggacttaa acatcatatg gctttaaatg ataaagacgg
     7081 atttgacact atttacgatc cggctctcaa agagcttaaa atagcaaatt ggaacgaacc
     7141 ttatatacta tttttcttca ctactatgtg tggagcttgc acggctcaag taccggcttt
     7201 aaatgaactt gtaaaagagt atggttcaaa gataaaagtt ataggagtta tgggaaattc
     7261 tctcgggttt gatggcgata tgatggcttt aaaagataaa ggcgttgagt ttatgagtgt
     7321 atcaactaaa aaatccgtag attatttttc aaatatcgtt ggaggaatta tgggaacgcc
     7381 ggttacttac gtttttgata aaaatggaaa aatatctaaa caatttttag gcttatatcc
     7441 taaatccgct cttgaaaacg aactaaaact acttttaaac taggttttat aaaatattaa
     7501 atggttatat gctatccttg caaacttcta atttagagtt tcaaaggtgg cattatgata
     7561 caaacttacg ccgaatggga tgagcaagag ctattgatgc ttagtatccc gcattctaat
     7621 agcgactgga agccttattt aaatgatatt ttaactagct atgaagaatt gataagcgct
     7681 gttagcagtt atcaaaaatt acttcttata gcgcctcaaa aaagcgactt tgatagattt
     7741 tctaaattta aaaatgtaga gtttttagaa gtcttgacaa atgatacttg gataagagat
     7801 tacggtgcta ttgatgtaaa atgcggtttg aaaaccatta gttatgattt caaatttaat
     7861 gcatggggcg gtaaatttga aagttcttta gataatgacg tcaataagaa actcttttcg
     7921 catttaaaag gcgagcttgt aagcattccg cttattttag agggcggcag catagagttt
     7981 aacggtgatg gtgtacttct aactacaacc agctgccttt taaatgataa tagaaactcg
     8041 cttagtaaaa atgagcttga aatcagacta aaagagcttt ttgggctaaa aaaaattatc
     8101 tggttagaac acggttttat aaaaggcgat gacactgata gccatatcga tactcttgct
     8161 agatttatat caaaagatac tatagcttac gcatcttgca cagataaaaa cgatgaacat
     8221 tatttgcctc ttaaagaaat ggaaaatgag cttaaaaaaa cagggtttaa tctagttcct
     8281 cttgagcttc caaagcctgt tatgttcgag ggacgcaggc tcggagctac ttattgtaat
     8341 tttatatttg tcaatggtgc tcttatagtt cctacttacg gtgataaaaa aagcgatgag
     8401 cttgctttaa gtacgcttaa gcaagttcta aatttagata taataggagt ggatagcacg
     8461 gtatttatca ggcaaaacgg cagtctacac tgctctagtc aaaatagatt taagggagat
     8521 agatgagagt atatcctcca gtagtagcag gaagcgtagc cgtagtattg gctatcataa
     8581 agtttgctat aggtttggct agcggttcta tggctgtttt gagctccgct atagattcgc
     8641 ttttagactg ccttgtatcg gctttgaact attttgcgct tagaaaatca aattccgatc
     8701 caaactccaa atttaatttt ggttatggca aaatagaggc tttagtggct ctttttgaag
     8761 gtgcttttat catagggata ggcattttta tctgttattc aagtgtaacg aaaataataa
     8821 atccagaaaa atcaatcgaa gtcggcgcag gtatgatagt tatgattata tctattatcc
     8881 ttactggagc tttggtgttt tatttgcagc gcgagtataa aaaaaccgga aatttaataa
     8941 taaaagccga cgcacttcat tatcaaacag atcttgtgac aaatgcggct attttagcgg
     9001 ctttgtttgc tatatggctt agcggatatg atattataga cgctcttttt ggtattggta
     9061 ttagcgttta tatagttttt agtgcgttta agttgctaaa agagggcgtt tatatcttac
     9121 ttgatggagc gctgcctgaa agtatggtaa gtgagataat agatattata aatttaaaac
     9181 acgaagtaaa aagttatcat tatctaaaaa gtcgtataag cggagaaaag tactatttta
     9241 gcgtacattt ggtatttgat cctagcatat ctcttagtaa agcgcactca gtagcagacg
     9301 atatagaaag tgaaataaga tctaaattta atagacataa atgggttttt gatatgcatt
     9361 ttgatactga agacgataga gataaggagg agttgtgaaa gtagcattag tagcacataa
     9421 attttatgga aataaaccag atacgataaa acgtactaca aaacttatag aagaagcagc
     9481 caacaagggt gcagagctta tcgtgcttga agagcttcat caaggcagtt atttttgtca
     9541 agatgaaagc gttgatagtt ttgagttggc aaatgacttt gaaagcgata tagcttattg
     9601 ggctgaggtg gcccatgagt ttaaaatagt tttagttact tctttgtttg aaaagcgctc
     9661 agcaggactg tatcataata cttctgttgt gtttgataat gatggaagaa tagccggaaa
     9721 atatagaaaa atgcatattc cagatgatcc gaatttttat gaaaagttct attttgctcc
     9781 aggagacctt gggtttgaac ctatagatac tagcataggc agactcggag ttttggtttg
     9841 ttgggatcag tggtatccag aggctgctag acttatggcg ctaaaaggag ctcagatact
     9901 tatatatcca acggctatag gttggtttga tggcgatagt gaagacgaaa aatccagaca
     9961 attagaagca tgggttgctg tacaaagagg acattcagta gcaaatggac taccagtagt
    10021 tactgttaat agagtaggtt ttgaagctgc tccagatggc aatggcggta ttagattttg
    10081 gggaaatagt tttgtttttg gacctcaagg agaggaattg tttcgttcaa atagcacaga
    10141 tgagcttgcc gatatagttg atatagatat aaaaagatgt gagcaagtaa gaagatggtg
    10201 gccgttttta cgagatagaa gaatagacgc gtatgaagga cttttaaaac gatttataga
    10261 ttaattataa actgagttat ctaagtaact cagtttacta attcaaaaaa atagtaaaaa
    10321 tccattgata ataagagcat taactaaatc tatgaaaaat gctccacaaa gcggaactat
    10381 gataaatgcc atatggctca taccgtagtg atttgtgact gtttgcatat ttaccattgc
    10441 tgttggagtc gctcctaagc caaatccaca gtgtccagca gccaaaaccg cagcatcata
    10501 gtctcgtccg caaaatctaa aagttataaa aatagcataa aataccataa gtgcaacttg
    10561 agagataagt atagtaacga taggaagcgc taaagacacg agctgccaaa gatttatact
    10621 cataagagca tatgccaaaa atagagatag gctaacattc cctataacgg atacttctct
    10681 gtcaaagact tcatgaattt taaatgcttg aagtaaattt ctaaggataa ctcccatgaa
    10741 taaacagtat acaaacgtag gtagagtaaa attcacgttt agcgttttta cgtaatctga
    10801 tacgaagttt cctatcaaca gacataaaga tataagtgct aaagactcta taaaagattg
    10861 ctgagtgatg agcttttctt ttccgggctg ttcaaaattt aaaatagcgg atttgtcttc
    10921 cacatttgta tctggtgttt ttagcttgta tttagttata agaaatttag ccacaggacc
    10981 tcctataaca cctcctgcta taagtccaaa cgtagcgctt gccattgcta cttcatatgc
    11041 tgcactaaag ttataaggcg cttttatgaa ctcgttcgcc caagctccgc cagtaccgtg
    11101 accgccgctc atagttatag atcctccaag cagtcctata agaggatttt ctccaagacc
    11161 taaggccact cctataccga ctgcgttttg caaaattagt aatccgctta taataaataa
    11221 aaatataacg agttttactc ctcctttttt aagggatgca aaatcagcca aaagccctat
    11281 gcttgagaaa aacgccagca tcaaaggatc tttgagagat gaatcaaaag ctaaatgtat
    11341 atttgcaaaa acatataagc acaaaaacaa tacagccgct ataataccgc ctacaacagg
    11401 ttctggtata ttatagtctt gcaaaaactt tactcttttt atcacaaaag agccaagaag
    11461 cagcactaaa accataacta ctaatgtgga gtacgaatct atatttatag tttgcattga
    11521 tattcctttt ttattataat tttatttata tataataatt atgccagaaa tattttaata
    11581 aaaatacaaa aaatcactcc aaaaaatatc aaagtctctc tctagcccta aaatcgggca
    11641 ttagattttc tataaaatcg taaaaactct tttgatgatg cggatagagt aggtgtgtca
    11701 tctcgtgaag tacgacgtac tcgataaagc gttcatcttt tgttattaaa tttaaattta
    11761 agtttatata gccttttttg gagttgcaac tgccccagcg agaagtcatt tttttaatgc
    11821 ttacgtgagt tacttttttg gatatttttg gttgataaaa ttctatgtat ttttgaaata
    11881 tctctttggc ttttaagcgt agaaatttat cgaactgcgc tttacaagga gctaaaattt
    11941 gagtgcctaa aactaaaact tctttgatat tttcatcaaa tttaagttca taagcatttc
    12001 ctaaaaattt gattttgtcg tctttgggtt ttatctttgc aagagtattt tctaaccaat
    12061 tttcgttttt actaagcaaa tttaagatat ttgttttcga ggtaaaaaaa ggagcggata
    12121 tacttatatc gccgtttgga gcgactttta gacgtagata ttttacaggt ttatagttta
    12181 tagtcacatc aaatttacca aatttcaaac tagacgtttt agttgccatt ttttacttct
    12241 ccagcgcaga gtatttgcaa aagctcttgc ccattcatct acgcaaaatc ctatccaaac
    12301 accgattatt ccatattcta aaattatatc aagatagtat cctataggaa gtgaaactcc
    12361 ccacataaaa agtgctccca ttataaatgg aaacctagca tctccgctag ctcttagcga
    12421 atttaccatt ataatattaa atgttctgcc gctttcaagc actaaagaaa gcgtgaaaag
    12481 aggccgcatt atggatttta gctcctcggt taaatttaaa ctattcatta tctcctcacg
    12541 gctcaaataa aatataaaaa gcactatcca agtaatgagc gccccgattt tcaagctttt
    12601 aaaagctctt ttataagctt tgtcaaactc gcaagctcct actaaatgac ctattattat
    12661 ctcgtttgca agacttattg atgtagcggc taaaaatata aacatagaca tctgaaaata
    12721 tatggtttgt acactaaggc tcgtttcccc catgcttgct acaaaactaa acgctaccat
    12781 atattgacct atccaaagca aattttctcc ggcgctaggc agtcctactt ttaagatttt
    12841 ggaaagtata tctaaactaa atttaaaaaa taatccaaaa aatatatgca ctttggctat
    12901 ttttactaaa acatacatta aaagtataat tcccacgcct ctagcaaata tagtagatat
    12961 agcaactccg cttaatccaa aattcggaag cccgaatagt ccaaaaagcg ctatagcatt
    13021 tccaaagata gttaaaatgt tcataaatac ggatataagc attatagcaa atgcataatt
    13081 tttcactctt acaattgcag ctatgactat accaagggct tctaaaaaca gtgctaaaga
    13141 tagtatatga aggtatttga aactatcttc tatgactcct actggaattt gcagaagttc
    13201 taaggctttg tgcgtgttta aaaatataaa tgcggcacat ataagcccta aaataccgtt
    13261 aaaactaagg ctgatatgaa tggctcttgt tgctaagttt atttttcttg ctcctaaact
    13321 ttgtgctact actacgctac agcctacgct aagaaagcta aaaacggtta caaaaaggtt
    13381 gaaaatttga tttccggctc ccatagctcc tactaaattt acatctactt ttgctaccat
    13441 aatcgtattt ataataagag ttaaagtacg aagtagcata tcgaaaaata tcggagttgc
    13501 caatctcgtt aaatttagtt ctttcactct ttatccttaa agccaaaagt tgagcctaca
    13561 catttttgcg aacttactat gagttcaaaa ttatgaagtt tcaaaatgag tttaacgatg
    13621 taaagtccaa gcccaagcga actgttccag tcgtagtctt gtgatttgta aaattttttt
    13681 aatatcagct ttagttcggc ttcttctatt ccctctcctg cgtcttttat gaaaattcct
    13741 gattcattta gcagtatttc tacatctttt tttgagtatt taagagcgtt ttcgcataaa
    13801 tttaaaacta cttgatatat catatcataa tctgctttta gggatttttc tcctattatt
    13861 ttgatttttt gatctgggta tttttgttct agattgctta tcgcttcttt gcaaagtttt
    13921 cttgcgtcaa atacgcttaa attcggggta atatcgccgc caaatactat tcttagcttg
    13981 tttaatatgt tgtttaatct atcgctattt gatattattt tgtttataaa tttaattctt
    14041 atctctttgc ttacatcatc atcaagtatt gtttgagcag acattttaat aactgaaatc
    14101 ggatttttaa actcatgact tatgccgctt agcagatttt ctagctgtgt attttttaac
    14161 ctgattttaa cagattgttt ttttaatttc ttatcttttt tattaagaag ttcttttatc
    14221 tgtcttgttt tatacataga aagttcgtat gatatatata ttaaaattat c
//
LOCUS       DAPPKW010000046        13994 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.046, whole genome shotgun sequence.
ACCESSION   DAPPKW010000046 DAPPKW010000000
VERSION     DAPPKW010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13994)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13994)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13994
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.046"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..697
                     /locus_tag="RPW04_001192"
     CDS             <1..697
                     /locus_tag="RPW04_001192"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012722.1,HMM:NF014567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDX6295284.1"
                     /translation="LKEGKNGDEIALVISKFNEMANSLEMVNRARMQFLTDISHELRT
                     PISKSKIALSFLEDGKYKNILKNSVTAMDKLTDELLHIERLNSNNVQFEIKEWSIESI
                     LLESLSKMIILDEILDVEMKSIFNINADLNYISIAIKNLIDNAIKYNDYQKDSRIYIK
                     STPNKLCIISSGEKLDKPLEFYTSVFTRDENARSGYGYGLNLVKRVLDKHGFELAYEH
                     INDKNIFCIIFSI"
     gene            complement(787..1167)
                     /locus_tag="RPW04_001193"
     CDS             complement(787..1167)
                     /locus_tag="RPW04_001193"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295285.1"
                     /translation="MGKDYSVPKSQVKEAYIACDLNIEECDVDTKLGNVTFSFYPRPL
                     VGMAPTTLKISGLPQNIKDPNVRIYGLNMEMGVISAPLTKQGSSYTANIVISLCVISR
                     MEYRLEVLSGDKPLGVSIDFYIKS"
     gene            complement(1248..1703)
                     /locus_tag="RPW04_001194"
     CDS             complement(1248..1703)
                     /locus_tag="RPW04_001194"
                     /inference="COORDINATES: protein motif:HMM:NF017394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HDX6295286.1"
                     /translation="MRKILFLALFCTFLFGENLKTDPFFKDVNTTCPIKFIDVFNHPD
                     FIAVLVYANGEKILFSSVKPMFHYFHMNPGKHISPLKTMLVTDFKTHALIDAATAYYV
                     FGSGIMSNSGDDLIPFANLDDAKEFMSANHGHKILEFKDVTKKLIDYLN"
     gene            complement(1700..2526)
                     /locus_tag="RPW04_001195"
                     /pseudo
     CDS             complement(1700..2526)
                     /locus_tag="RPW04_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009295293.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
     gene            complement(2523..3176)
                     /locus_tag="RPW04_001196"
     CDS             complement(2523..3176)
                     /locus_tag="RPW04_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6295287.1"
                     /translation="MINLKNVTKKFGAVSVLDCVNLDIDDAKKVLIIGQNGAGKTTLM
                     KTILGEILLNSGEVLINGVNPAKNRKKALSYISFVPQNPPPLKLSVGELCDYSISSSG
                     SNLDDIKTYLKALNLDFDKEDKKPFHKLSGGMKQKILIAIALARNGDILMFDEPTANL
                     DPEARECFLNLLSDKFKEKTIIFISHRLSEVRGIVECVVEMDLGRITSIKDLSKEDR"
     gene            complement(3189..4085)
                     /locus_tag="RPW04_001197"
     CDS             complement(3189..4085)
                     /locus_tag="RPW04_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapH/MauN family ferredoxin-type protein"
                     /protein_id="HDX6295288.1"
                     /translation="MNKYESRQTVANAGFLSTFISTDKNGKKRPSMRFYRYFIMIFTH
                     LLFVLSYVADIQILEGDITGSRIMGFHLADPFITTQIVLAHDSFPINLMIGSLTILAF
                     YVIFAGRAFCSFVCPYNFFGEFAERLNAKLVKAKIIKPRHFDPNMRYLFLLAFWLLSF
                     LSGYLIFEIFSPVGIVSRFIIYGYSAAIWWAVLVFLVEVFFSRRFWCRYVCPIGTLYS
                     LVSRMRAIKISWNKDKCDHCGVCMDVCIVPKVLEITKAKNADANGGSFSVVSGDCTLC
                     GRCIDVCHGDALSYENRLKKLL"
     gene            complement(4090..4533)
                     /locus_tag="RPW04_001198"
     CDS             complement(4090..4533)
                     /locus_tag="RPW04_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002947654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295289.1"
                     /translation="MGKGIALGFGVVIVFLMGYLLMSGDAQPEAKVAAQKTQNQPEKK
                     AVNNNDLATDAAELNKILELKQSLENTNDGVSKLYLTSCAPCHAKDGKGVIAPSIAGK
                     NKEEILARLHDYKANLVPNTLMKGVLDNVSDENLTALAEEISLFK"
     gene            complement(4536..5084)
                     /locus_tag="RPW04_001199"
     CDS             complement(4536..5084)
                     /locus_tag="RPW04_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295290.1"
                     /translation="MNKTLIFASAFLLLVGCSQQDNKFDKNETKNEVVEQNASIVVKK
                     SENQVNEKNNWITYDIDGKKSVKFGLGDDNNETTKSIGALAMTRTPLQSINKALIRGT
                     LSKNFITKCSACHDDYANGIIGPSLLTKSQDEIFKMIEAYKTKTKVNVLMVELVKRMD
                     DKEIMDLAIEISTFNEQFRSKK"
     gene            complement(5087..5761)
                     /locus_tag="RPW04_001200"
     CDS             complement(5087..5761)
                     /locus_tag="RPW04_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDX6295291.1"
                     /translation="MNRRNFTIFSLATLACSAAAGYLLRGYEARNHLRPPGSVKHFES
                     LCIKCGQCVQVCPYHSIELLGIDDGINLASAYIDPAKRGCYLCDLFPCVLSCPSGALD
                     HNTTSIKDVKMGVAVVVNLKNCYANLGKTVEQSDVAHLLDRKAYNEREEAAKNIIQNS
                     IGKKCDLCVSSCPVSGAISIIDIEGKSAPKIDKSCVGCGVCSEVCFAKVIDIAPGRTY
                     EEIYKE"
     gene            complement(5754..6968)
                     /locus_tag="RPW04_001201"
     CDS             complement(5754..6968)
                     /locus_tag="RPW04_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
                     /protein_id="HDX6295292.1"
                     /translation="MKKLCLFLLIIQASLANPLQDAIDSANPGDIIELGDAKYTGNII
                     INKAITIDGKNKAVIQGDEKGDVIKIMSSNVSLLNLNIQGSGDSHTTLDSAISCDQAN
                     EINIIGNHISDSLFGINFKQCNASVIKDNFITSKNVDLGLRGDAIRLWYSHDNIVENN
                     HILKSRDMVIWYSSNNEIRKNIGEEGRYSLHFMYAGKNLVEDNIFKLNSVGIFFMFSS
                     GSLVRNNQVLNSTGAFGVGIGMKDTSDFVIQNNILSYNARGLYLDQSPFQPGTINKFE
                     NNKILYNTVGVQFHATQHKSIFLENDFIGNMEVAINDTPGSKIAKNEWNKNYFDDYEG
                     FDRNKDGIGDLPYQNYTYLDSLWQYHPNLRFFYGSSVISILNFIARLAPFSSPELLIT
                     DENPRIKRAYHE"
     gene            complement(6965..7732)
                     /locus_tag="RPW04_001202"
     CDS             complement(6965..7732)
                     /locus_tag="RPW04_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HDX6295293.1"
                     /translation="MKRYQIYTILALILMTVGFTIPVIAYHGMGAKIKEEKALPSYVY
                     PIYNFYSSFQYKNHLMPDDIKKDLRKMIENRSEIGVPSLPIWYVSLEAPNYPKEAFPD
                     GIPVYFHVDGYSGDVHEMNTINHYIGMYPMEHGGNTERAIAPYYLLVATIFMLLYLYY
                     DGRGNSLLLIPTIIAPVLFMSAFVGWLYWYGHNMQEWGAFKIKPFMPTALGDGKVAQF
                     TTHSYPTIGFWVMMAMSIFCILAIFSKKKYLKSKADS"
     gene            complement(7859..10453)
                     /gene="nosZ"
                     /locus_tag="RPW04_001203"
     CDS             complement(7859..10453)
                     /gene="nosZ"
                     /locus_tag="RPW04_001203"
                     /EC_number="1.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-dependent nitrous-oxide reductase"
                     /protein_id="HDX6295294.1"
                     /translation="MSSFLKTPFVLTAGICLSLSSVFGASELETIMKERNLSEKDVLA
                     AAKTYQPSGRKDEFIVFSSGGQSGQVIVYGVPSMRIYKYIGVFTPEPWQGYGYDNESK
                     AILKSGAIRGKEISWGDTHHPNFTEKNGEYVGDYLFINDKANPRMAVISLHDFETTQI
                     VVNPIMKSEHGGSFVTPNTEYVIEASQYAAPLDNNYHPIEEYEAVYRGAVTFWKFDYP
                     KGKIDEKKSFSLELPPYMQDLSDAGKGESMGWGFTNSFNSEMYTGGIEKGLPPFEAGM
                     SRNDTDYMHVYNWQALEKLVQDPKNYTIINDHKVIPISVAVANNALFLIPEPKSPHGV
                     DVTPDGRYIVVGGKLDTHASVYDFRKIKNLIDKKDFAGKDPFGIPILDMKKALHGQVE
                     LGLGPLHNTFEEKDGIIYTSLYVDSQIVKWDYKNLKVLDRVNVHYNIGHLDTMEGKSA
                     KPIGKYALALDKLSIDRFNPVGPLHPQNHQLIDITGPKMELIYDMPIPLGEPHDVVSI
                     AASKLKPAMTYKMGTNSRTGEQSVGMTLAGQERIERNGKNVTVYATMIRSHINPEHIE
                     LNKGDNVTIYLTNLERAQDETHGFAIDLYNVHASIEPGKTASVSFVADMEGVFPYYCT
                     EFCSALHLEMMGYMYVKDPNKKYESVKKAKLKELTKEQLEAEYKKVIATNKATDDVIQ
                     SVVTFLKEKHFEKYPKVKQLVEDALDQYGKIPEVKAKADAAYKAGDVNGAILWEYQVW
                     QYMVKTADVGLRAKNNLTKALATPMSKVQARGEEAYLKGGCNGCHVIGQVSSGPDLTG
                     VLLRHDNAEQWVFDFIKNPASKYEEDYVKAMINYFNLRMPNQHMTDQEIKDIIEYLKW
                     IDENAGLN"
     gene            complement(10495..11361)
                     /locus_tag="RPW04_001204"
     CDS             complement(10495..11361)
                     /locus_tag="RPW04_001204"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295295.1"
                     /translation="MIKIIFIICFFFSFSFAECKIVQNTSNDIVFTSSSEDKIVYYDG
                     KKLLLKSLPSLKTTLDKEYDPRSLTSVILSENEIIAGFKNGFAYSIYLNGYEEAIINP
                     NKTSLYKPVSSIAKFKDKLAFVIGNESVVIYDKINKIYKKTNIDNSSKVMFSKFMNDI
                     FYFACYDRSFYELDTLNLKLKKLFKTPSLITSFDLINNKPVVGLINGNAYFEGKTYEI
                     SKGALTKILVSGDSMIFGDDKGDIYIYDLNFKFKNKMKTSSDTIRDMFIDKNLGLVVL
                     LWDSRVYSCKIN"
     gene            complement(11536..13335)
                     /locus_tag="RPW04_001205"
     CDS             complement(11536..13335)
                     /locus_tag="RPW04_001205"
                     /inference="COORDINATES: protein motif:HMM:NF012570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dynamin family protein"
                     /protein_id="HDX6295296.1"
                     /translation="MLKEFIKEYKRLYDTSFNPGFKGEFEKFYKLLTEPKFHPSGFLF
                     DRLNFLNSLNYEPPIVAVVGQFSSGKSSFLNALLGSDILPTGVVPVTAKPTYIKYAPN
                     LMLKALFFDGRQEYHSIDELGAFVDQRVSLKDVKCLNIYAPNEILKKVSFIDTPGLNS
                     RSDADTYETKQILKEAVALIWISLIDNAARKSELDELNLIPNSLRQNAICLLNQKDKL
                     SSSEIQNVLSHSKTTYENYFSDILPVSAKMQKEGSKDSGFEQVFKFIDRLNENKEQFI
                     ISECSKILDSNRAQNEKFIAILDELGDIFDDFCISCDSKLRCLEKEYLDKFGLFFETI
                     KQNAALIASEINGCLKSEKKSYFRPKNGIFHKDSYEKIQYERVMLQGDEVLSKLIYND
                     DKLNKVFKKFKRDLGEFQSKIIADLSAVFDELKDEVLVYKAKYESLRKSDSLHSDVLF
                     ADIRKFSSEVYALFLNEFEKSLFDKYAKLGLFFERVFIKVTQNYQNAVKLSVSFIEQK
                     CQKASDDYESDPIAFSLYYPQLSEINERLLANLSYYEFENDFIGSSTFISKFINELIG
                     NFKDIKDENLKYISALKERYALNLKELEIKFYF"
     gene            complement(13329..>13994)
                     /locus_tag="RPW04_001206"
     CDS             complement(13329..>13994)
                     /locus_tag="RPW04_001206"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295297.1"
                     /translation="LNKNLDYSNLNEFSTLKSISSRLKDRIVSDVKYANSKKQKVDFD
                     RTNVILESGFRDMFIDFFRDFKHKISKDIESFYEILKLKLNTKDEIINLPNIKEYLDA
                     NMPKISYEKLKTQVKDSIKNSQNIETLSSTLIKLFDDFIAGLNLKNELNRLASLCTNE
                     FINSIEKQTTQMKMALELKKSELQSFIGETMQESNAKELLRKDIEEKLLNLEEIHNRI
                     IAC"
BASE COUNT         4487 a         2603 c         2021 g         4883 t
ORIGIN      
        1 gctcaaagag ggtaaaaacg gagatgaaat agcactagtc ataagcaaat ttaatgaaat
       61 ggcaaactct ttagaaatgg taaatagagc cagaatgcaa tttttaacag atataagtca
      121 tgagctaaga acacctatat caaaatctaa aatcgcactt agttttttag aagacggaaa
      181 atataaaaat atactaaaaa actctgtaac tgcgatggat aaactaacag atgagctact
      241 acatatagaa agactaaact caaacaatgt tcagttcgag ataaaagagt ggagcataga
      301 gagtatactc ttagaaagct tatcaaaaat gataatttta gatgaaattt tagatgtaga
      361 aatgaaaagc atatttaaca taaatgccga tctaaactat atctctattg ctataaaaaa
      421 tcttatagat aatgctataa aatataacga ctatcaaaaa gacagtagaa tttatataaa
      481 atctactcca aataaactat gcataataag cagcggagaa aaactagata agccgcttga
      541 attttatact agcgtattta ctagagatga aaatgcaaga agcggttatg gatatggttt
      601 aaatctagta aaaagagtac ttgataaaca tggttttgag cttgcttatg agcatatcaa
      661 tgacaaaaat atattttgta taatatttag catataaaac acgcaataat cgcaatgaaa
      721 ataagctaaa ttcaaaaagc tagccgccct ataatacacg agcagctata aattttatat
      781 aaaaatttag ctttttatat aaaagtcaat gctcacacca agcggtttgt caccgcttaa
      841 aacttctagt ctatactcca tgcgagagat tacacataga cttataacta tatttgcagt
      901 gtatgagctg ccttgttttg taagaggagc gcttatgact cccatttcca tatttaaccc
      961 ataaatgcga acatttggat cttttatgtt ttgcggcaat cccgaaatct ttaaagtagt
     1021 aggagccata cccacaagag ggcgcggata aaacgagaat gtaacattac ccaatttagt
     1081 atccacatcg cactcttcta tgtttaaatc acacgctata tatgcctctt ttacctgcga
     1141 tttaggaacg gaataatctt ttcccatata ataaagaaat gccgctagcg ttccaactaa
     1201 aataccacca atgagtaaaa aaaaaataaa tttttcatac ttactcctta gtttagataa
     1261 tcgattagct ttttagttac atctttgaat tctaaaatct tatgaccgtg gttggcactc
     1321 ataaattctt tagcatcatc taaattcgca aatggtataa gatcatcgcc gctattgctc
     1381 attataccgc tgccaaatac gtaatatgcg gttgcggcgt ctatcaaagc gtgagtttta
     1441 aaatcagtta caagcatagt ttttaatggt gagatatgct tgccgggatt catatgaaag
     1501 taatgaaaca taggttttac cgaactaaaa agtatctttt caccattagc ataaactaaa
     1561 acagctataa aatcaggatg gttaaatacg tctataaatt taataggaca agtagtatta
     1621 acgtctttga aaaatggatc ggtttttaaa ttttcaccga acaaaaatgt acaaaataga
     1681 gctaaaaata gaatttttct catactagat cctttttggt aaagagaata tagcctaaag
     1741 ctaggcttat aatgcctaaa attataggat aaattattga atatattata aagttaccta
     1801 ctccaaaact atctaaaata aagtaagccg ctgcgcctat gacagctaag tttctatcaa
     1861 ataaacttat agaagccacg cgaaatacct ctataggatt taaaagagct atggtataaa
     1921 ttatgttttc atttactgca ttttgcatca taagcccgat taaagctaag tctataaatg
     1981 ctagtaaaaa tagccaaaat aaaaatgaaa agccaagagc aagctcgcta ctttttatca
     2041 cgcttgatat caaaaatcca aatgataaaa acacaaagct gagtgctaaa agtagcaaag
     2101 tatagtaaaa aataccaccc atggtatctc tacgcctttt aaaacagcta tcactaaaga
     2161 aaatataaga gccaaaacta taggcataaa tatagtaaat gctctaccta aagctttacc
     2221 gaagtaatac tctttaagcg aaataggaaa gctcaaaaga tattccaaag ctccggcttc
     2281 gcggtctgtg cttatgcttc taactgtagt tattagtata aaaataggca aaatcacaac
     2341 acaaatttga ataaataaaa gaagcattct agtaagtccg ctaaatcccg caactcttga
     2401 atccaacacc ccagtaacaa aaaaagttgc tataagaccc gcgaaaataa gcagataaag
     2461 caagaaccat ttggaacgga acgactctct catgtcgatt ttggcaatta aaagtaggtt
     2521 cttcatctat cttcctttga taaatctttt atagaggtta tgcgtcctaa atccatctct
     2581 acgacgcatt ctacgatacc tcttacttcg cttaaacggt gcgatataaa tattatagtt
     2641 ttttctttaa atttatcact tagtaaattt aaaaaacact ctctagcttc tggatcaaga
     2701 tttgcagtag gttcatcaaa catcagtata tcaccatttc tagctaaagc tatggctatt
     2761 aagatttttt gtttcatacc tcctgagagt ttatgaaatg gctttttatc ctctttatcg
     2821 aaatctaaat ttaaagcttt taaataagtt tttatatcat ctaaatttga tccgcttgag
     2881 cttatactat agtcgcaaag ctcacctacg cttagcttca aaggaggcgg attttgcggt
     2941 acaaaactta tatatgacag agctttttta cgatttttag caggatttac accatttatt
     3001 agtacttcgc cgctatttag caaaatttca cctaaaatag tcttcataag agttgttttt
     3061 cctgctccgt tttgacctat aatgagaact tttttagcgt catctatatc taaatttacg
     3121 caatccaaga cactaactgc tccaaatttt ttagtaacat tttttaaatt tatcaaattt
     3181 agcccttttt atagtagttt tttaagccta ttttcatatg ataaagcatc tccatgacac
     3241 acatctatac agcgtccgca aagcgtacaa tctccactaa cgacactaaa gcttccgccg
     3301 tttgcatctg catttttggc ttttgtaatc tcaagcacct ttggaactat acaaacatcc
     3361 atacatactc cgcagtgatc gcatttatct ttattccagc ttatttttat agctcgcatt
     3421 ctagatacta aagagtaaag agttcctatc gggcagacgt atctacacca aaatcttctt
     3481 gagaaaaata cttcaactaa aaataccaaa acagcccacc atatagcagc actataaccg
     3541 tatataataa atcttgaaac tatgcctact ggactaaata tctcaaatat aagatatccg
     3601 ctaagaaaac taagcagcca aaacgctagt aaaaacagat atcgcatatt tggatcaaaa
     3661 tgtctaggtt tgataatttt agcttttact aattttgcgt ttaatctttc ggcaaattct
     3721 ccaaaaaagt tgtacggaca tacaaaactg caaaacgctc tacctgcaaa tataacataa
     3781 aatgctagta tagtaagcga acctatcatc aaatttatcg gaaaactatc atgtgctaat
     3841 actatctgag tagtgataaa aggatcggct aagtgaaatc ccattatccg tgatccggtg
     3901 atatcacctt ctagtatttg gatatcggct acatatgaaa gtacaaataa aagatgggta
     3961 aatatcatta taaaatagcg gtaaaagcgc atgcttgggc gctttttacc gtttttatcg
     4021 gtacttataa atgtacttag aaaaccagcg ttcgcaacgg tttggcgtga ttcgtactta
     4081 ttcataatct tacttaaata aagaaatttc ttctgctaaa gcggttaaat tctcatcgct
     4141 aacattatcc aaaacgccct tcataagggt atttggtaca aggttggctt tataatcatg
     4201 caatctagcc aaaatttctt ctttattttt tcctgctata cttggagcta taactccttt
     4261 tccgtctttt gcgtggcacg gcgcgcagct agttaaatag agtttgctta caccatcatt
     4321 tgtattttct aaactctgtt ttaactctaa tatcttattc aactctgcag cgtctgtagc
     4381 taagtcatta ttatttaccg cttttttctc aggctgattt tgagttttct gcgccgctac
     4441 tttagcttct ggctgcgcat cgccgctcat caacaaatat cccattaaaa aaacaataac
     4501 tacaccaaag cctaaagcta tacccttgcc tatattcatt tcttactcct aaattgctca
     4561 ttaaatgtac ttatctcaat cgctaaatcc ataatctctt tatcgtccat acgttttaca
     4621 agttctacca ttaaaacatt tactttagtt tttgttttat aagcttctat cattttaaat
     4681 atctcatctt gactctttgt aagaagagac ggtcctataa tgccgtttgc ataatcatca
     4741 tgacaagccg aacatttagt gatgaagttt ttacttaaag ttcctcttat taaagcttta
     4801 tttatgcttt gaagaggagt tctagtcata gctaaagcac ctattgattt tgtagtttca
     4861 ttgttatcat caccgagccc aaatttgacg ctcttttttc cgtctatatc ataggttatc
     4921 cagttatttt tctcatttac ttgattttca ctttttttaa ccactataga cgcgttttgt
     4981 tccactactt catttttagt ctcattttta tcaaatttgt tatcttgctg gctacagccg
     5041 actaataata aaaatgcact agcaaatata agtgttttgt tcattgttat tccttgtaaa
     5101 tttcttcgta agttctgccc ggtgctatat ctataacttt agcaaagcac acctcgctgc
     5161 atactccaca cccaacacag cttttatcta ttttgggggc tgatttgccc tctatatcta
     5221 tgatgcttat cgctccgctt acagggcatg atgaaacgca tagatcgcac tttttaccaa
     5281 tgctattttg tataatattt ttagcagctt cttctctttc gttataagct tttctatcaa
     5341 gcaaatgagc gacatcgctt tgttctactg ttttaccgag attcgcatag cagtttttta
     5401 aatttactac tacggctacg cccattttaa cgtcttttat actagtagta ttgtgatcta
     5461 atgcaccgct tggacaagat aatacgcaag gaaacaaatc acatagataa cagcctcttt
     5521 tagcaggatc tatgtaagct gaggctaaat ttattccatc atcaataccc aaaagctcta
     5581 tactatgata tgggcaaacc tgcacacact gtccgcactt tatacataga gactcaaagt
     5641 gttttacgct tccaggaggt cttaggtgat ttcttgcttc atatcctctt aacagatatc
     5701 cagctgcagc actacaggct aaagtagcta aactaaatat agtaaagttt cgtctattca
     5761 tgatatgctc tttttattct tggattttca tctgttatga gaagctccgg acttgaaaac
     5821 ggtgctaaac gagctataaa atttaaaata cttataacag aactaccgta aaaaaatctt
     5881 aaattaggat gatactgcca tagcgagtct aaatacgtat agttttgata tggtaaatct
     5941 cctataccgt ctttatttct atcaaaacct tcataatcgt caaaatagtt tttattccac
     6001 tcgtttttgg ctattttaga tcccggagta tcatttatag cgacttccat attgcctata
     6061 aagtcatttt ctaaaaatat acttttatgt tgagtagcat gaaactgcac tccaaccgtg
     6121 ttgtataaaa ttttattatt ttcaaattta tttatcgttc ctggttgaaa cggcgactga
     6181 tcaagatata atcctcttgc gttataagat aaaatattat tttgtattac aaaatcgctc
     6241 gtatctttca taccaatacc aactccaaat gctccagttg agtttagaac ctgattattt
     6301 cttacaagag atccagatga gaacataaaa aatattccga ctgaatttag tttaaaaatg
     6361 ttatcttcaa ctaaattttt tcctgcatac ataaaatgaa gagaatatct accctcttct
     6421 cctatatttt ttctaatttc gttgttgctt gagtaccaaa taaccatatc tctacttttt
     6481 aatatatggt tgttctctac tatattgtca tgactatacc aaagtcttat agcatcacct
     6541 ctaagtccta aatcaacgtt ttttgaagtt ataaaattat cttttatcac agaagcgtta
     6601 cactgcttaa agtttatgcc aaacaaagag tcgcttatgt gattgccgat aatgtttatc
     6661 tcatttgctt gatcacagct aatagccgaa tctaaagtcg tatgagaatc gccgctacct
     6721 tggatattta aatttaaaag agagacgtta gaactcataa tctttataac atctcctttt
     6781 tcatctcctt gaataactgc tttattttta ccgtctatcg ttatggcttt atttattatg
     6841 atatttccgg tgtatttggc atctccaagc tcgattatat cccccggatt tgcgctatcg
     6901 atagcatctt gtagaggatt tgccaaactt gcttggataa tcaataaaaa taagcagagt
     6961 tttttcacga atcagcctta gatttcagat attttttctt tgaaaatata gccaatatac
     7021 aaaatatact catagccatc atgacccaaa aaccgatagt aggatatgaa tgggtagtga
     7081 attgagctac tttaccgtct cctaaggctg ttggcataaa cggttttatc ttaaatgcgc
     7141 cccactcttg catattgtgc ccataccagt aaagccaacc tacaaatgcg ctcataaata
     7201 gaaccggagc tatgatagtc ggtataagta aaagagagtt tcccctgcca tcgtaatata
     7261 aatataaaag cataaatata gtcgcaacca acagataata cggagctata gctctttctg
     7321 tatttccgcc gtgttccata ggatacattc cgatatagtg atttatggta ttcatctcat
     7381 gaacgtcacc gctatatcca tctacgtgaa aatacacggg aattccatcc ggaaaagcct
     7441 cttttggata gtttggagct tctagcgaaa cataccagat aggaagactt ggaacaccta
     7501 tttctgatct attttctatc atttttctta aatctttttt tatatcatca ggcataagat
     7561 gatttttata ctgaaaactt gagtaaaaat tatatatagg atatacatac gaaggaagtg
     7621 ctttttcttc ttttatctta gcccccattc catgatatgc aataactgga atagtaaatc
     7681 cgacagtcat taaaataagc gccagtatag tataaatttg ataccttttc atctcatttc
     7741 ctttagtttg ttttttaaat ttgcttttaa atttaataat ctagcctatt aaatttaaaa
     7801 gcaaagacga gcaaagctcg cctttgcaaa aatccgattt tggattacat caactagact
     7861 aattaagtcc tgcattctca tcgatccatt ttaggtactc gatgatatct ttgatctctt
     7921 gatcggtcat atgttgattt ggcattctta gattaaagta attaatcata gcttttacat
     7981 agtcttcttc gtatttgcta gctggatttt tgatgaaatc aaatacccat tgctcagcat
     8041 tatcatgtct tagtaaaacg cctgttagat ccgggcctga acttacttga ccgataacgt
     8101 gacaaccgtt acatccgcct tttaagtatg cttcttcacc gcgagcttga actttactca
     8161 taggagttgc aagagctttt gtaaggttgt ttttagccct taaaccaaca tcggctgttt
     8221 ttaccatgta ttgccatact tggtattccc aaaggatagc gccatttaca tcacctgctt
     8281 tataagcagc atcagctttg gctttaactt caggtatttt tccgtattga tcaagtgcat
     8341 cttcaacaag ttgtttaact tttggatatt tctcgaagtg tttttctttt aagaatgtaa
     8401 caacactttg gataacatcg tcagttgctt tatttgttgc tataactttt ttatattcag
     8461 cttctaattg ctcttttgta agctctttaa gttttgcttt tttaactgat tcatacttct
     8521 tgtttggatc ttttacatac atataaccca tcatctcaag gtgaagagct gaacagaact
     8581 cggtacaata gtaagggaaa acaccttcca tatcggctac aaagctaacg cttgcagttt
     8641 tacctggttc tatagaagca tgtacgttat aaagatctat agcaaatccg tgagtctcat
     8701 cttgagcacg ctctaagttt gttagataga tagtaacgtt atcgccttta tttaattcta
     8761 tatgctctgg gttgatatgg cttcttatca ttgtagcata tacggttacg tttttaccgt
     8821 ttctttctat tctctcttgt ccagctagag tcataccgac tgattgctca ccggttcttg
     8881 agtttgtacc cattttgtat gtcatagcag gttttagttt gctagctgct atagatacaa
     8941 catcgtgagg ttcacctagt ggaatcggca tatcgtatat tagctccatt ttaggacctg
     9001 ttatatcgat aagttggtga ttttgtggat gaagaggacc aaccggatta aatctgtcta
     9061 ttgaaagttt atcaagcgct aaagcatatt tgcctatagg ttttgctgat ttaccttcca
     9121 tagtgtcaag gtgacctatg ttatagtgta catttactct gtctagaact tttaaatttt
     9181 tataatccca ttttacgatt tgactatcaa catacaatga tgtatagatg ataccatctt
     9241 tttcttcaaa tgtattatga agtggtccaa gaccaagttc tacttgtccg tgaagagcct
     9301 ttttcatatc aagaatagga ataccaaaag gatctttgcc tgcaaagtct tttttgtcaa
     9361 tcaaattttt gatttttctg aagtcataaa cactagcgtg agtatctagc ttaccgccga
     9421 ctactatata tctaccatca ggagttacat ctacaccgtg tggagatttt ggctcaggaa
     9481 ttaaaaatag agcattgttt gcaactgcaa cactaatagg aataacttta tgatcattta
     9541 taattgtata attttttgga tcttgtacaa gtttttctaa tgcttgccag ttataaacgt
     9601 gcatatagtc agtatcattt ctactcatac cagcctcaaa cggaggaaga cctttttcta
     9661 taccgcctgt atacatctct gagttaaagc tgtttgtgaa gccccagccc atagactcgc
     9721 ctttacctgc atcgcttaag tcttgcatgt atggaggaag ttcaagtgag aatgattttt
     9781 tctcatctat tttacctttt ggataatcaa atttccaaaa tgtaacagca cctctataaa
     9841 ccgcctcata ttcctctatc gggtgatagt tattatcaag cggagctgca tattggctag
     9901 cttcgataac atactcggta tttggagtaa caaagctacc gccgtgctca cttttcatga
     9961 taggatttac tacgatttga gttgtctcaa agtcgtgcaa gctgataaca gccattctag
    10021 ggttggcttt atcatttata aatagataat cgcccacgta ttcgccgttt ttctcagtga
    10081 aattcgggtg gtgagtatct ccccagctta tctctttgcc tctgatagct ccgcttttta
    10141 gtatagcttt gctttcattg tcatatccgt atccttgcca aggctctgga gtaaatacgc
    10201 cgatatattt gtaaatcctc atagatggga caccataaac tataacctgt ccgctttgtc
    10261 cgccagatga aaaaacgatg aactcatctt tacgaccact tggctgataa gttttagctg
    10321 ccgctagaac atctttttcg ctcaagtttc gctctttcat gatagtttca agctcacttg
    10381 caccaaaaac agatgacaag ctaagacaga tgccagccgt aagtacaaac ggagttttca
    10441 aaaaactact cataaggctc tcctttttaa aaattttgta tcaaatttgg atacctagtt
    10501 aattttgcag ctataaaccc tagaatccca tagaagaact actagaccta gatttttatc
    10561 tataaacata tcccgaattg tatcgctgct ggttttcatt ttatttttaa acttaaagtt
    10621 taaatcataa atatatatat cgcctttatc atcaccaaat atcatagaat caccacttac
    10681 taatatcttt gtaagtgcgc cttttgatat ctcgtaagtc ttgccttcaa aataagcatt
    10741 tccgtttatc aaaccgacta ctggtttgtt atttatcaga tcaaaagatg ttataaggct
    10801 tggagtctta aaaagctttt ttaattttaa atttaatgta tctagctcgt aaaagctcct
    10861 atcgtaacag gcaaaataaa aaatatcatt cataaattta gaaaacataa ctttggaact
    10921 attgtcaata ttagtttttt tatatatttt atttatctta tcatatataa ctacgctttc
    10981 attgccgata acaaacgcca atttatcttt aaatttagcg atggaagaaa ccggcttata
    11041 caaagaagtt ttattaggat ttataatcgc ctcttcatat ccatttaaat atatactata
    11101 agcaaaaccg tttttaaacc ctgctataat ctcattttca ctcaaaataa cagatgttaa
    11161 agagcgcgga tcgtactctt tatcaagagt agtttttaaa ctcggcaaac tttttaatag
    11221 tagttttttt ccatcgtaat aaactatttt atcctcacta ctagaagtaa agactatatc
    11281 attactagta ttttgaacaa ttttgcactc ggcaaaagaa aaagaaaaaa agaaacaaat
    11341 aataaaaatt attttaatca taatgcaatc tttatttaac ataattttta tattatatca
    11401 ttttttgcct gttttgtggt tgattttagt catttaaact tataattttt aaatttattg
    11461 taaaaaaaat aagttaagtt tatagtttaa taaaaaagtg cctaaaagaa tacgcacatt
    11521 aactaaaaag cgtatttaaa aataaaattt aatttctaac tcttttaaat ttaaagcata
    11581 acgctctttt agagcagaaa tatatttcaa attttcatct tttatgtctt taaaattacc
    11641 aattagttca tttataaatt tagatataaa agtgctgctt cctataaagt cattctcaaa
    11701 ctcataataa ctaagatttg caagcagacg ctcatttatc tcacttaatt gcggataata
    11761 aaggctaaaa gcaataggat cgctctcata gtcatcgctt gctttttggc acttttgctc
    11821 tataaaagat acgcttagct taactgcatt ttgataattt tgagtaactt ttataaaaac
    11881 tctttcaaaa aatagtccaa gctttgcata cttatcaaaa agcgacttct caaactcatt
    11941 caaaaacagc gcataaactt cactgctaaa ctttctaata tctgcaaata atacatcaga
    12001 atgcaaagaa tcactttttc ttaagctctc atattttgct ttatagacta aaacctcatc
    12061 tttcaattca tcaaaaacag cggacaaatc ggcaataatt ttgctttgaa attcacccag
    12121 atcgcgctta aattttttaa aaaccttatt tagtttatca tcgttataaa tgagtttaga
    12181 aagaacttca tcgccttgta acataactct ttcgtattgt attttttcat aactatcttt
    12241 gtgaaagata ccgtttttag gtctaaaata tgactttttt tcacttttca aacagccatt
    12301 tatctcgctt gctataagag ccgcattttg tttaatagtt tcaaaaaata gtccgaattt
    12361 atctaaatac tctttttcaa ggcatctaag cttagagtcg cagcttatac aaaaatcgtc
    12421 aaaaatatct cccaactcat ctaaaatagc tataaatttc tcattttgcg ccctgtttga
    12481 atcaagtatt ttagagcatt cagatattat aaactgttct ttattttcat ttaatctatc
    12541 tataaattta aaaacctgct caaaaccgct atctttagaa ccctcttttt gcatcttcgc
    12601 agataccgga agtatatcgc taaaataatt ttcatatgta gttttagaat ggctaagtac
    12661 attttgtatc tcgcttgagc taagtttatc tttttgattt agaagacaaa tcgcattttg
    12721 tcttagcgaa tttggtataa gatttagctc gtctaactca ctttttcttg ctgcattatc
    12781 tataagactt atccatatga gcgctactgc ttcttttaaa atttgctttg tttcatacgt
    12841 atcggcgtcg cttcttgagt taagaccagg agtatctatg aaactaactt tttttaaaat
    12901 ctcgtttgga gcgtagatat taagacattt aacatctttt aagctaactc tttgatccac
    12961 aaaagctcca agctcatcga tactatgata ctcctgtctt ccatcgaaga aaagagcttt
    13021 tagcataaga ttcggcgcgt actttatata tgtaggtttt gctgtaacag gaacaactcc
    13081 agtaggtagt atatcgcttc ctaaaagagc atttaaaaag ctggattttc cactgctaaa
    13141 ctgccctact acggccacta taggcggttc ataatttaat gagtttaaaa aattcaatct
    13201 atcaaataaa aatccgctag gatgaaactt aggctcagtt aaaagtttat agaatttttc
    13261 aaattcccct ttaaaaccgg gattaaaact agtatcatat agtcttttat actcttttat
    13321 aaattctttt aacacgcaat tatcctatta tgaatttctt ctaaatttaa taacttttct
    13381 tctatatctt ttctaagcaa ctctttagcg ttactttctt gcatagtttc tcctataaaa
    13441 ctttgtagtt cacttttttt taactctaaa gccattttca tctgcgtcgt ctgtttttct
    13501 atgctattta taaactcatt tgtacaaaga gatgctagcc tatttagctc gtttttcaaa
    13561 tttaacccgg ctataaaatc atcaaaaagt ttaattaaag tcgaacttag agtttcgata
    13621 ttttggctat ttttaatgct atcttttact tgagttttca gtttttcata agatattttc
    13681 ggcatatttg cgtctaaata ctctttgata tttggtaaat ttataatttc atctttggta
    13741 tttaatttta gctttaaaat ctcgtaaaac gactctatat ctttacttat tttatgttta
    13801 aaatccctaa aaaagtctat aaacatatct ctaaatccac tttctaatat aacattcgtt
    13861 ctatcaaaat caactttttg ctttttggag tttgcatact taacatcgct tactattcta
    13921 tcttttagcc tagaagatat actttttaag gtactaaact cgtttaagtt actataatca
    13981 agatttttat ttaa
//
LOCUS       DAPPKW010000047        13443 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.047, whole genome shotgun sequence.
ACCESSION   DAPPKW010000047 DAPPKW010000000
VERSION     DAPPKW010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13443)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13443)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13443
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.047"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..894)
                     /gene="rfaQ"
                     /locus_tag="RPW04_001207"
     CDS             complement(<1..894)
                     /gene="rfaQ"
                     /locus_tag="RPW04_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipopolysaccharide heptosyltransferase
                     III"
                     /protein_id="HDX6295298.1"
                     /translation="MKILVMKFRNIGDVLLTTPLLENLKHYYPDSKIHFALNKGCEAM
                     IEGNPNIDKIHIYDRNEIKKKNAFRRIYLEYKFAKSLKNEKFDIVIQTTKGDRGLIIA
                     KFCCAKTVVSYLAKNRIFNKFITHKIKEQGSTHTVLANLDALKALGYEPKNARVKIYF
                     DDYSQDSKFKNIPNRFIHIHPMSRWLFKCIDDETLAKIIDFCELNLNHKVVLTCDKNP
                     VELEKIQNILKNCSAKPVLFLGNLNLKEVAFLSSKSELFIGVDTAIMHIAAANNVPCI
                     AFFGPSGAFHWGPWDNSCLKSG"
     gene            complement(891..1586)
                     /locus_tag="RPW04_001208"
     CDS             complement(891..1586)
                     /locus_tag="RPW04_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDX6295299.1"
                     /translation="MISFVVLTYNSKKYIKEVLSSISWADEVVVVDSGSNDETLSICS
                     EFKNVKITHQKWLGFSAQKQLGVDLSKNEWVFVLDSDEVVTNELKNEITNELKNHKFK
                     VYKVARLNYFFGKPIRKMGLYPDYTIRFFNKNYAKFDGRSVHESVITNSKIGVLKNHF
                     IHHAYESVEQFINKQNSYSSLNKKSNKIKAVLNPCWTFFKLYILKGGFLEGWNGFVIA
                     KLYSEYTFWKYIK"
     gene            complement(1583..2467)
                     /locus_tag="RPW04_001209"
     CDS             complement(1583..2467)
                     /locus_tag="RPW04_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HDX6295300.1"
                     /translation="MSDIIYLFLYKFFKFVVTYTPQSLQSPFFTALAYIFYKFDKKHT
                     NIMRVNLKMCFPEFTGQKIEKIIKATYRNFGYFGADFLRNQDSTKENILNKVSFKNED
                     ILLDALDTKRPIIVQTAHYGNWELFSLAMAAKFGSVSIVGRNLDSSVMDQILSKNRTK
                     FDIELIPKDGGARDILKALKNRRLLGILVDQNTAKKDGVQCEFFGKKIMHTPAASIFA
                     NKTGAIIIPAFIKRISRDKNEICFFKEILAENYEGDKLQKATQAQSDATEQMIKEKPD
                     EYFWMHKKFKHFYEEIYK"
     gene            complement(2460..3428)
                     /gene="waaC"
                     /locus_tag="RPW04_001210"
     CDS             complement(2460..3428)
                     /gene="waaC"
                     /locus_tag="RPW04_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004308585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HDX6295301.1"
                     /translation="MKIAIIKLSSLGDIVHATVVLQFIKKYCEAAEISWFADEKFGSI
                     LDSHPDIKEVIKLPLKDKKFVKTYKILSKFRNKFDIIIDLQGLIKSAIVGRILGKNLV
                     GFDKFSAKEPLCSMFYNAKINCDYNENIIIRNLTLASKALNFKFTTSQIDNKIPCFKV
                     NDDNFDFLDKNSKNLLIAPFASEKSKRYDKFKTVINGLKKYNIFISFGSEKEKAEALD
                     LTKNTHAKLLPALSLNRMINLINKVDLVIGNDSGITHIAWAQNRASITIFGNRPSKRN
                     AYKTDKNIVLDTGKKIDAKCIDKSDFCVCDIDPNLVIKEAKRLIDE"
     gene            3488..4306
                     /locus_tag="RPW04_001211"
     CDS             3488..4306
                     /locus_tag="RPW04_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020247039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDX6295302.1"
                     /translation="MARSEYICVFDCETVPDSDTLRRVFGYEGSDIEVAKEAFKTQLE
                     KSGSEFLPVCFHEVVAISAVMADKFGRFLRVSTMQGKNEEEKITKFINFINEHNPRLV
                     SFNGRGFDLPMLMVRAMRYNLQAEPYFSTSDKENGKDKWTNYRSRYDGIFHLDLLDHI
                     SDFRAVSGLKLDTLCASLNLPGKYDVHGDQVIDMFYEEKLDKINEYCESDTLNTYWLF
                     LKYELLRGKLTKDDYANYLSQMSDYLKDKKTDMSYTPVFSKFIDDELGRLKDSL"
     gene            4348..5565
                     /locus_tag="RPW04_001212"
     CDS             4348..5565
                     /locus_tag="RPW04_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HDX6295303.1"
                     /translation="MRDIKIGIIGLGYVGMPLAAAFSDAFSVVGFDLNEKRINELKNG
                     IDRTLELDEEQMAKVLKNGMKFSVNLDDIKECNFYIVTVPTPIDKNNRPDLTPLYKSS
                     ASLAKVLKKGDIVVYESTVYPGVTEDECVPVLETSGLKFGVDFECGYSPERINPGDKE
                     HTVTKIKKIISASSSAALKTVEDVYSKIIKAGVYKASSIKVAEAAKVIENTQRDINIA
                     FVNELLMIFDKMKIDTNEVLDAAATKWNFLNFRPGLVGGHCIGVDPYYLTHKAEEIGY
                     HPEIILAGRRINDNMGIYHANQSVKMMIKNGLKVNGAKVLVLGITFKENCPDIRNSRV
                     IDVIKELKEFGCNVDVYDPWADANDVKKEYGVELLESLNLSGHDCVILAVAHKEFAKI
                     DFGRCLSYKIKRI"
     gene            5575..6633
                     /locus_tag="RPW04_001213"
     CDS             5575..6633
                     /locus_tag="RPW04_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase"
                     /protein_id="HDX6295304.1"
                     /translation="MKILVTGTAGFIGFHLSRELAKRGDEVVGFDCINDYYDINLKYA
                     RLNELGIKRENIEENIAVRSSIYPNLSFIKADLSDLKTMQKLFENGSFDCIVNLAAQA
                     GVRYSLINPHAYINSNILGFTNILECCRNYGVKNLVYASSSSVYGLNEKMPFSTHESV
                     NHPISLYAASKKSNELMAHTYSHLFGLSTTGLRFFTVYGEWGRPDMALFLFTKAALEG
                     KAIDVYNYGKMKRDFTYVTDIVKGVMKCVDNPAIANLAWDASHPDPATSNAPYKIYNI
                     GNNSPVELMDYIKAIEIKLGREIKKNLMPLQAGDVPSTYADVSDLVEDFNYKPNTSVN
                     DGVARFVQWYMDYYKVKI"
     gene            6684..7448
                     /locus_tag="RPW04_001214"
     CDS             6684..7448
                     /locus_tag="RPW04_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HDX6295305.1"
                     /translation="MLLKEYNDENLSGWLMSEKYDGVRAIWDGKSLKSRNAKIIKAPK
                     WWLKDFPNFAIDGELWSGRGEFEFIGSVISSFDDKGWENIKFMIFDVPNAKGNLRDRL
                     EVLREFLSQNSNEFIRVIEQIKIDSNEDAFAFLDEVVSGGGEGIVVRNENAPYKNGRS
                     GEILKLKKFKDSECKVVKLQNGKGKFEGLLGSLICVDIFSNIEFKIGSGFSDEQRSNP
                     PKVGTIITYKYQNLTKYAKPRFPVFLRVKSDNNLTK"
     gene            7459..7701
                     /locus_tag="RPW04_001215"
     CDS             7459..7701
                     /locus_tag="RPW04_001215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295306.1"
                     /translation="MKKVCFLAVVFVISAGAWPINEASNAFERKYHREGSIYRQLGQG
                     KWECTDRYSKDSAELEWCIKGWEYMDEKLESKKRDW"
     gene            7780..11637
                     /locus_tag="RPW04_001216"
     CDS             7780..11637
                     /locus_tag="RPW04_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014517037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDX6295307.1"
                     /translation="MVTKENLAQVLKLLEFKQNGEIFSKTYANDAVIKVDFKNLKIIY
                     PLEIKKGDETTCNFSHTENLVVLECVNRLLEKGYKPANLELEPRWQLGRDAKSGKADI
                     LVKDESNLPYLIIECKTAGSEFSKEWNRMQNEPSQLISYHQQERSAKFLALYTSDFKN
                     NELKFENYILNFNDNEIYLQSQGFAKSYQTATSAEEIFKVWSEIYKGDYSQVGIFEIN
                     INPYEVGKSALCFDDLVELTSQNEDGKSYEDGKYHDFATILRKYNISGKENAFDKLVN
                     LFLCKIYDETHNKENLQFCYRGVTADSFEAMQERLMKLYKDAMKEYLNEEITYVSDEQ
                     IDEQFSDFKRNKIKTQTLKNQINEFIRMLKFYSHSDFSFIEVHNKTLFEQNAQVLKAI
                     IKLFENLRLTQNKTNQLLGNLFELFLQKGMKQDEGQFFTPIQICEFIVHSLPLKMLFD
                     KDIPKVIDYACGAGHFLNTYANIAKSISNDSEAINSNIYGIEKEYRLSKVAKVSAAMY
                     GQSGVKISYADALDESKFKERDFDLLIANPPYSVKGFLQTLSKNECEKYELFNYINLK
                     SSNAIECFFIERANRLLKSNSKVAIILPSSILNKDGVYEKTREIILRNFDIISITELG
                     SNTFGATGTNTVILFLSKKQTYANGFNSQSYENLKENIESSLDFSNLYLLEGLLAYCE
                     FMGYKKDEFREFLSGGYGEIYSHDIFKEYLNEFKNSSALSNLKKSRRYKDSNEKEALE
                     QKEFLNFCLNLEKEKILFFSLVKDTKTLIIKSPSENKAQSKFLGYEWSNRKGSEGLKE
                     LQTPYNSPLFERENLDNPEKLCFLVRRAFILNDDFEKQKLKDPYVSFSQNLQIPANLS
                     EFAFTTPLLKCLDFTSAKFNKAINLNIASSKNGVNLNPFEGSKFKLVKLGEICEILTG
                     STPSTQKKEFYGSDFPFYRPADLINGRNVNSSEVMVSKLGYESQRALPKKSILVSCIG
                     TIGRVGMIEKSGIFNQQINALLPNNNYISEFLFYLFDTNFFKQLLIQQTHNTTVPIIN
                     KSKFSNIKIPLPPLEIQEKIAKECEEVEEKFKTIRMSIEEYKSLIKEILIKSCVITDS
                     SLEIGGGYEQNLAQILNDLPSPQNYGLSEWESVKLTNKDFILKIGKRVLDKDLTQDGI
                     NVFSANVKEPFGKINKDLIKDFSLDSVLWGIDGDWMTGFVKANEPFYPTDHCGVLRSK
                     SHKAKILEFALFEVGAKFGFSRQNRASIERISNLTLSLPPLEAQEKIVKAIEFCEGEI
                     SNLNNELKTLENATSKILKRELF"
     gene            11700..12692
                     /gene="galE"
                     /locus_tag="RPW04_001217"
     CDS             11700..12692
                     /gene="galE"
                     /locus_tag="RPW04_001217"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HDX6295308.1"
                     /translation="MNILITGGAGYIGSHVLKSLLEEGGHNITVIDNFYTGSKEALVT
                     LEKVGKFEFIKCSLEDTSSLREIFRGRNFEAIIHFAAYIEVFESMVKPLKYYLNNTAN
                     AANLINLAVEHGVSKFIFSSTAATYGEPSSGVVDETSEQNPINPYGRSKLMTEWILKD
                     AALANRDFKFGILRYFNVAGASTDGLIGQNYPNATHLIKVATQTITRKRESMSIFGSD
                     YATKDGTCVRDYIHIEDLANAHLAVLEYLKTNDSDIFNVGYGRGFSVKEVVQTAKKVG
                     GVDFKVLNAPRREGDPAMLISDASKLRNKTSWKPTRESLELIISSALEWEKKLK"
     gene            complement(12693..13073)
                     /locus_tag="RPW04_001218"
     CDS             complement(12693..13073)
                     /locus_tag="RPW04_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HDX6295309.1"
                     /translation="MKLSNSYFLRYLCVGVLNTIVGFGIIFTLMYIGYSAEISNLIGY
                     ICGIIFSYFMNKFFTFNTKNRNKKEFIKFIIAMLISYVLNLLMLKTCLSLGINAYIAQ
                     LFAGAAYTVSGFLISKFWVFKLNS"
     gene            complement(13074..>13443)
                     /locus_tag="RPW04_001219"
     CDS             complement(13074..>13443)
                     /locus_tag="RPW04_001219"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295310.1"
                     /translation="KEQTEYAKYRVEIMLHDFYKMIPKDNKFGFTSEVNKNNFMSPIA
                     LNTSKTFPIIMRNHAIDNMLDANWLFNSYGLMAHYEHWTPILSKGLCGQKNKKPIEIV
                     ENPLHKITKYDNNCFVIEFL"
BASE COUNT         4583 a         2028 c         2482 g         4350 t
ORIGIN      
        1 tccgcttttt agacaagagt tatcccaagg tccccaatga aatgccccgc taggtccaaa
       61 aaacgctatg caaggcacat tatttgccgc tgctatatgc atgatcgcag tatctactcc
      121 tataaatagt tccgattttg agcttaaaaa cgctacttct tttaaattta aatttcctaa
      181 aaatagtacc ggttttgcac tgcagttctt aagtatattt tgtatttttt caagctcgac
      241 cgggttttta tcacaggtta atactacttt gtgatttaaa tttagttcac aaaaatctat
      301 gattttagcc aaagtttcat catctataca tttaaaaagc catctgctca taggatgaat
      361 atgaataaat ctatttggta tatttttaaa tttagaatct tgtgaatagt catcaaaata
      421 gattttaact ctagcgtttt ttggctcata tcctaaagct ttgagtgcgt ccaaattcgc
      481 tagtaccgta tgcgtagatc cttgttcttt tattttgtga gttataaatt tattaaaaat
      541 acgattttta gctaagtatg atacgactgt ttttgcacag caaaatttag ctatgatgag
      601 acctcggtct ccttttgtag tttggataac gatatcgaat ttctcatttt ttagagattt
      661 tgcaaattta tactcaagat aaatacgcct aaaagcattt ttctttttta tttcatttct
      721 atcgtaaata tgtattttat ctatatttgg attgccttct atcatcgcct cgcagccttt
      781 atttaaagca aaatgtatct ttgaatccgg ataatagtgt tttaaatttt ctaacaaagg
      841 agtcgtgagt aagacatcgc cgatatttct aaatttcatt actaaaattt tcattttata
      901 tacttccaaa atgtatattc gctataaagt tttgcgatga caaagccatt ccagccctct
      961 aaaaaaccgc cttttaaaat atataattta aaaaacgtcc agcaaggatt aagtacggct
     1021 tttattttat ttgatttttt atttaggctt gaatagctat tttgtttatt tataaactgc
     1081 tccacgctct cataggcatg gtggatgaag tgatttttta gtactcctat ttttgagttg
     1141 gtaatcacgc tttcatgcac gcttctaccg tcaaatttag cataattttt attgaaaaat
     1201 cttatcgtat agtctggata aaggcccatt tttctaatcg gcttaccaaa aaaatagttt
     1261 agtctagcaa ctttgtatac tttaaattta tgatttttaa gctcgttggt aatttcgttt
     1321 ttaagctcgt tggtaacaac ttcatcgcta tcaagcacaa atacccattc gttttttgat
     1381 aaatcaacac cgagctgttt ttgtgcacta aatccaagcc atttttggtg agtgatttta
     1441 acgtttttaa attcagaaca aatacttaaa gtttcatcgt ttgagccgct atctaccact
     1501 acgacttcat cggcccaaga tatgcttgat agcacttctt ttatgtattt tttactattg
     1561 taagtcagca ctacaaagct tatcatttgt aaatttcctc ataaaaatgt ttaaattttt
     1621 tatgcatcca aaagtattcg tccggttttt cttttatcat ctgttcagta gcatcgcttt
     1681 gagcttgagt cgctttttga agcttatccc cttcataatt ttcagctaaa atctctttaa
     1741 aaaagcaaat ttcgttttta tcccttgaaa tacgttttat aaaagcagga atgatgatgg
     1801 ctcctgtttt gttagcaaat atactagcag ctggggtgtg catgatcttt ttgccgaaaa
     1861 actcacactg aactccatct tttttggctg tattttgatc tactaaaatt ccaagcagac
     1921 gcctattttt aagagcttta agaatatctc tagcgccgcc gtcttttggt ataagctcta
     1981 tgtcaaattt tgttctattt ttgcttaaaa tttgatccat aacactgcta tcaaggtttc
     2041 tgccgactat agaaacacta ccaaactttg ctgccatcgc aagactgaaa agctcccagt
     2101 ttccataatg cgctgtttgt actatgatag ggcgttttgt gtctagcgcg tctagcaata
     2161 tatcttcatt tttgaaacta actttattta gtatattttc ttttgtgcta tcttgatttc
     2221 gtaaaaaatc agctccgaaa tagccgaaat ttctgtacgt tgcttttata attttttcta
     2281 ttttttgccc tgtaaattcc ggaaaacaca tttttaaatt tactctcatg atgtttgtat
     2341 gttttttatc gaatttataa aaaatatacg caagtgccgt aaaaaatgga ctttgcaatg
     2401 attgtggtgt gtaagttact acaaatttaa aaaatttata taaaaacaga taaattatat
     2461 cactcatcaa tcagcctttt tgcctctttt ataactaaat tcggatctat atcacatacg
     2521 caaaaatcac ttttatcaat gcattttgca tctatctttt ttcctgtgtc tagtactata
     2581 tttttatctg ttttataagc gtttcttttg cttgggcgat ttccgaaaat agttatagaa
     2641 gctctatttt gcgcccacgc aatgtgagtt ataccgctat cgtttcctat gactaaatcg
     2701 actttgttta taagatttat catacgattt aaactaagtg caggaagtag tttggcgtga
     2761 gtattttttg taagatctaa tgcttcagcc ttttcttttt ctgagccaaa acttataaag
     2821 atattatact tttttaatcc gtttatcacc gttttaaatt tgtcgtagcg tttgcttttt
     2881 tcgcttgcaa aaggtgctat tagtagattt ttactgtttt tatctaaaaa atcaaaatta
     2941 tcgtcgttta ctttaaagca tggtatttta ttatctattt ggcttgttgt aaatttaaaa
     3001 ttaagggctt tgctggctag agttaaattt ctaattatta tattttcatt ataatcgcag
     3061 ttgatttttg cattataaaa catgctgcaa agtggctctt ttgcgctaaa cttatcaaat
     3121 cctaccaaat tttttcctaa aattcgcccg acgatagctg attttataag tccttgaagg
     3181 tcgatgatga tatcaaattt atttctaaat ttagataaaa ttttgtaagt ttttacaaat
     3241 tttttatctt ttaaaggaag ttttataact tcttttatat caggatgcga gtctaaaata
     3301 gagccgaatt tttcatctgc aaaccacgaa atttcggctg cttcgcaata tttttttata
     3361 aattgcaaaa ctacggttgc atgtactata tcgccaaggc tggagagttt tatgatggct
     3421 attttcaact atttttccat tgttttttgg tatgattgta taaaaaatat tctaaaaagt
     3481 aggtaaaatg gcaagaagtg aatatatatg cgtgtttgat tgcgagaccg taccagatag
     3541 cgatacttta agacgtgttt ttggctacga aggaagtgat atagaagtag caaaagaggc
     3601 ttttaaaact caattagaaa aaagcggaag cgagtttttg cctgtttgtt ttcatgaagt
     3661 cgttgctata tcggctgtta tggcggataa atttggtaga tttttacgag tttctacgat
     3721 gcaaggtaaa aatgaagagg agaaaataac taaatttata aactttataa acgagcataa
     3781 tcctcgtttg gtaagtttca acggtcgcgg ttttgatctt cctatgctga tggtgcgtgc
     3841 tatgcggtac aatcttcaag ccgagccgta ttttagtaca agcgataaag aaaacgggaa
     3901 ggataaatgg acaaattaca gaagcagata tgatggcatt tttcatcttg atttgcttga
     3961 tcatatcagc gattttaggg ctgttagtgg actaaaatta gatactcttt gcgcctcttt
     4021 aaatctccct ggaaaatacg acgtgcatgg agatcaggtt atcgacatgt tttatgagga
     4081 aaaattagac aaaataaatg aatattgcga gtctgatacg ctaaatacat actggttgtt
     4141 tttaaaatat gagttgctgc gcggaaaact aactaaagat gattatgcta attatttatc
     4201 tcaaatgagc gattatttaa aagataaaaa aacagacatg agctatacgc ctgtgttttc
     4261 taaatttata gacgatgaat taggtagact taaagatagc ttatgatatt ttggtgtata
     4321 attttctaaa tttaaaaaag gttcgcgatg agagatataa aaatagggat tatcggtctt
     4381 ggatacgtcg gaatgccttt agctgcggca tttagcgacg cttttagcgt tgtaggattt
     4441 gaccttaatg aaaaaagaat aaacgagcta aaaaacggta tcgatagaac tcttgaatta
     4501 gatgaagaac agatggctaa agtactaaaa aacggtatga aatttagcgt aaatttggac
     4561 gatataaaag agtgcaactt ttacatagtt acggttccaa ctccgatcga taaaaataat
     4621 cgtcctgatc ttactccgct ttataaatca agcgcgagtt tagccaaagt gcttaaaaag
     4681 ggcgatatag tagtgtatga aagtaccgtt tatccgggtg tcacagaaga tgaatgcgtg
     4741 cctgtgcttg aaactagcgg gctgaaattc ggtgtggatt ttgagtgcgg atacagccct
     4801 gagcgtataa atccgggtga taaagagcac acggtcacga aaatcaaaaa aatcatctcc
     4861 gcaagtagtt ctgcagccct taaaacagta gaagacgttt atagcaagat cattaaagca
     4921 ggagtttata aagctagtag tataaaagta gccgaagccg caaaagtcat agaaaatacg
     4981 cagcgcgaca taaatattgc ctttgtaaat gagctattga tgatatttga caagatgaag
     5041 atagatacca acgaagtgct tgacgcggcc gcgactaagt ggaacttttt aaatttccgc
     5101 ccaggactcg tgggaggcca ctgcatcggt gtagatccat actatcttac gcataaagcc
     5161 gaagagatcg gctatcaccc agagatcatt ttagcaggac gaagaataaa tgataatatg
     5221 ggaatttacc atgcaaatca gtctgttaaa atgatgataa aaaacggatt aaaagtaaat
     5281 ggtgctaagg ttttagtgct tggaatcact tttaaagaaa actgccccga tatccgcaat
     5341 tcaagagtta ttgacgtgat aaaagagctc aaagagtttg gttgtaacgt agatgtttat
     5401 gatccttggg cggacgcaaa cgatgtgaaa aaagagtacg gcgtagagct tttagagagt
     5461 ttaaatttaa gcggacacga ctgcgtgatc ttagctgtgg cacacaaaga gtttgctaaa
     5521 atagacttcg gcagatgttt atcttataaa atcaaacgaa tttaaaggca ttttatgaaa
     5581 attttagtta ctggaacagc cggatttata ggatttcatc taagccgtga gcttgcaaag
     5641 cgtggcgatg aagtggtcgg atttgactgt ataaatgatt attacgatat aaatttaaaa
     5701 tacgcaaggc taaacgagct tggtataaaa cgtgaaaata tagaagaaaa catagcagtt
     5761 agatccagta tttatccaaa tttaagcttc ataaaagccg atttaagcga tcttaaaact
     5821 atgcaaaagc tttttgaaaa cggctcgttt gactgcatag taaatttagc cgcgcaagca
     5881 ggagttcgct actctctcat caatccgcac gcctatataa atagcaatat tttaggtttt
     5941 acaaatattc ttgaatgttg tcgtaattat ggtgtgaaaa acctcgtata tgcaagctca
     6001 agttcggttt atggactaaa tgaaaaaatg ccgttttcca ctcacgagag tgtaaatcat
     6061 cccatcagtt tgtacgccgc gagcaagaaa tcaaacgaac ttatggcgca cacttatagc
     6121 catctttttg gacttagcac gaccggacta agatttttta ccgtttatgg cgagtgggga
     6181 cgtcctgata tggctctgtt tttatttacc aaagctgcct tagagggcaa agctatcgat
     6241 gtttataact atggaaagat gaaaagagac ttcacttacg taactgatat cgtaaaaggc
     6301 gtaatgaaat gcgtggataa cccggctatt gcgaatttag cgtgggatgc aagccatcct
     6361 gatccagcta cttcaaacgc gccttataaa atttataata tcggaaataa ctctccagtc
     6421 gagctaatgg actacataaa ggcgatcgag ataaaactag gacgtgaaat taaaaaaaat
     6481 cttatgccgc ttcaagcagg tgatgttcct tcgacttacg ccgatgtaag cgatctagta
     6541 gaggatttta actataaacc aaatactagc gtaaatgatg gagttgcaag attcgtgcag
     6601 tggtatatgg actattataa agtaaaaatt tgaagttttt agctctatta ttaatcgctt
     6661 ttttaatttt aaaagccgaa gttatgctat taaaagagta taatgatgaa aatttaagcg
     6721 gttggttaat gagcgaaaag tatgatggcg tgagagctat ctgggatggc aagagtttga
     6781 aaagcagaaa tgctaagatc atcaaagctc caaaatggtg gctaaaagat tttccgaatt
     6841 tcgctataga cggtgagctt tggagcggac gaggcgagtt tgagtttatc ggctccgtga
     6901 ttagttcttt tgatgataaa ggttgggaaa atatcaaatt tatgatattt gatgtgccaa
     6961 acgctaaggg aaatttgcgc gatagactag aagtgctgcg tgagttttta agtcaaaatt
     7021 caaatgagtt tatacgggta atagagcaga taaaaataga ctcaaacgaa gacgcttttg
     7081 cgtttttaga tgaggtcgtt agcggtggtg gcgagggcat agtcgtaaga aatgaaaacg
     7141 caccttataa aaatggtaga agcggcgaaa ttttaaagct caaaaagttt aaagatagtg
     7201 agtgtaaagt cgtcaaactg caaaacggta aaggtaaatt tgaaggactt ttaggttcgc
     7261 tgatttgtgt tgatattttt agtaacatag agtttaagat aggttctggt tttagtgatg
     7321 agcaaagatc aaatccgcca aaagtcggca ctatcattac ttataaatat caaaatttaa
     7381 ctaaatacgc taagcctaga tttcccgtat ttttacgtgt taaaagcgat aataatttaa
     7441 caaaataaag gataaaatat gaaaaaagta tgttttttag ctgtagtatt tgtcataagc
     7501 gccggcgcat ggcctataaa cgaagcgagt aacgcttttg agagaaaata tcatagagaa
     7561 ggctcaattt atagacaatt agggcaagga aaatgggaat gcactgatag atattctaaa
     7621 gattcagctg agcttgagtg gtgtataaaa ggctgggaat atatggatga aaagctggag
     7681 agtaagaaga gggattggtg agtttaaaaa gataaaaatc tcatctttgg ctcaatgcct
     7741 acttaactta tatgtgaagt taaaataata aggtaaaaaa tggtaacaaa agagaattta
     7801 gcccaagtac taaaactttt agaatttaaa caaaacggcg agatttttag caaaacttac
     7861 gcaaacgacg cagtcataaa agtagatttt aaaaatttaa aaataatcta tccactagag
     7921 ataaaaaaag gcgatgagac tacttgcaac ttttctcata ctgaaaattt agtcgtttta
     7981 gagtgcgtaa atcgtctgct tgaaaaaggc tataagcctg caaatttaga gcttgaaccg
     8041 cgttggcagc ttgggcgaga tgccaaaagc ggcaaagctg atattttagt aaaagatgaa
     8101 agcaatttgc catatttaat aattgagtgt aaaaccgccg gaagtgaatt tagcaaagag
     8161 tggaatagaa tgcaaaatga gcctagccag ttaatcagct atcatcaaca agagcgtagt
     8221 gcaaagtttc tagcacttta tacaagcgat tttaaaaaca atgagcttaa atttgaaaat
     8281 tatattttaa attttaacga caatgaaatc tacttacaaa gtcaaggctt tgccaaaagt
     8341 taccaaacag ccacaagtgc cgaagagatt tttaaagttt ggagtgaaat ttacaaaggc
     8401 gattactcac aagttggaat ttttgagata aatataaatc cttatgaagt tggcaaaagc
     8461 gcactttgtt ttgatgattt agtagagctt actagccaaa atgaagatgg caaaagctat
     8521 gaagatggca aatatcacga ttttgccacg attttgcgta aatacaacat aagcggtaag
     8581 gaaaacgcct ttgataaact tgtaaatctg tttttatgta aaatttacga tgaaacgcac
     8641 aataaagaaa acttacaatt ttgttaccgt ggcgttacgg ctgacagctt tgaagcgatg
     8701 caagagcgtt tgatgaagct ttataaagat gctatgaaag agtatttaaa cgaagaaatc
     8761 acatatgtaa gcgatgaaca aatagatgag cagtttagcg actttaaacg aaacaaaatc
     8821 aaaactcaaa cactaaaaaa ccagataaac gaatttatcc gtatgctaaa attttactct
     8881 catagcgatt ttagctttat tgaagtacat aacaaaactc tttttgagca aaacgcacaa
     8941 gttttaaaag ccattattaa gctttttgaa aacttaagat taactcaaaa taaaaccaac
     9001 cagcttttag gcaatctttt tgagttattt ttgcaaaaag gtatgaagca agatgagggg
     9061 cagtttttta cgcctattca aatttgcgag tttatagtgc attctttacc gcttaaaatg
     9121 ctttttgata aggatattcc aaaggtgatt gactatgctt gtggtgcggg acattttcta
     9181 aatacgtatg caaatatagc taaaagtata agtaatgatt ctgaagctat aaactcaaac
     9241 atttatggca tagaaaaaga atatcgccta agtaaagtcg caaaagtaag tgctgctatg
     9301 tatgggcaaa gtggtgttaa aatttcttat gcagacgctc ttgatgagag caaatttaag
     9361 gagcgtgatt ttgacttgct tatagcaaat ccaccttata gtgtaaaagg ttttttgcag
     9421 actttatcaa aaaatgaatg cgaaaaatac gaacttttta actatataaa tttaaaaagt
     9481 tcaaatgcta tcgagtgttt ttttattgaa cgtgcaaaca gacttttaaa aagcaattca
     9541 aaagttgcta ttatcttgcc ttcaagcatt ttaaataaag acggcgttta tgaaaaaact
     9601 agagagataa ttttaagaaa ttttgacatc atctctataa ccgagcttgg ttcaaatacc
     9661 tttggcgcta ccggcacaaa taccgtaatt ttatttttaa gtaaaaagca aacttatgca
     9721 aatggcttta attctcaaag ttatgaaaac ttaaaagaaa atatagaaag ctcgctagat
     9781 ttttctaatc tttatttgct tgagggcttg ctagcgtatt gcgaatttat gggttataaa
     9841 aaagatgagt ttagagagtt tttaagcggt ggttatggag aaatttatag ccacgatatt
     9901 tttaaagagt atttaaacga atttaaaaac tcatccgcgc tatcaaattt aaaaaaatct
     9961 agacgctata aagatagcaa tgaaaaagaa gctttagagc aaaaagaatt tttgaacttt
    10021 tgtctaaatt tagaaaaaga gaaaattctc ttttttagct tagtaaaaga tacaaaaact
    10081 ctcatcataa aaagcccgag cgaaaacaaa gctcaaagca aatttttagg ctatgagtgg
    10141 agcaatcgca aaggaagcga agggctaaaa gagctacaaa cgccgtataa ttcgccgctt
    10201 ttcgagcgtg aaaatttaga taatcctgaa aaactttgct ttttagtaag acgtgctttt
    10261 atcttaaatg atgactttga aaaacaaaaa ttaaaagatc catatgttag ttttagccaa
    10321 aatttacaaa ttcctgcgaa tttaagcgaa tttgccttta ccacgccgct gttaaaatgc
    10381 cttgatttta cgagtgcgaa atttaataaa gctataaatt taaatattgc aagtagcaaa
    10441 aatggcgtaa atttaaatcc ttttgaaggg tctaaattta agcttgtaaa acttggagaa
    10501 atttgcgaaa ttttaacagg ttcaacacca agcacacaaa aaaaagaatt ttatggttct
    10561 gattttcctt tttatagacc agcggattta attaatggta gaaatgttaa ttcatctgaa
    10621 gttatggtct caaaacttgg atatgaaagt cagagagctt tacccaaaaa atctatctta
    10681 gttagttgca ttggaacaat tggaagagtt gggatgattg aaaaaagtgg aatttttaat
    10741 cagcaaatta atgcattatt gccaaataat aattatataa gtgaattttt attttatttg
    10801 tttgatacta atttttttaa acaattatta attcagcaga cacacaatac aacagttcca
    10861 attataaata aaagtaaatt ttcaaatatt aaaatcccac ttccaccgct agaaatccaa
    10921 gaaaaaatcg ctaaagagtg cgaagaggta gaagagaaat ttaaaactat tagaatgagt
    10981 attgaagagt ataaaagctt gattaaagaa attttaatta aaagttgtgt aatcaccgat
    11041 tctagtttag agataggggg agggtatgag caaaatttag ctcaaatttt aaacgattta
    11101 ccatcaccgc aaaattatgg cttaagcgag tgggaaagcg taaaattaac aaataaagat
    11161 tttatattaa aaatcggtaa gcgtgtttta gataaagatt taacgcaaga tggcataaat
    11221 gtatttagtg caaatgttaa agaacctttt ggaaaaataa ataaagattt aataaaagat
    11281 tttagtcttg atagtgtttt atggggaatt gatggagatt ggatgacagg atttgtaaaa
    11341 gcaaatgaac ctttttatcc gactgatcat tgcggagttt taagaagtaa atcacataaa
    11401 gcaaaaattt tagaatttgc tctttttgaa gttggtgcta aatttggatt ttctagacaa
    11461 aatagagcat caattgaaag aatttctaat ttaactttat cacttccgcc gcttgaggct
    11521 caagaaaaaa tcgttaaagc cattgagttt tgtgagggtg aaatttcaaa tttaaataat
    11581 gagttaaaga cgctagaaaa cgccacaagc aaaattttaa aacgtgaatt attttaggct
    11641 atttaagtct aaactagcta taataatcac taagatttaa agtaaaacga aggcgaaaaa
    11701 tgaatatctt gataaccgga ggagctggat atatcggctc tcacgtttta aaatctctgt
    11761 tagaagaggg tgggcataac ataactgtca tagataattt ctacacagga agtaaagagg
    11821 cgttagtaac gcttgaaaaa gttggaaaat tcgagtttat aaaatgctct ttagaagaca
    11881 cttctagcct tagggagatt tttagagggc gtaattttga agcaatcata cattttgcag
    11941 catatataga agtgtttgaa agtatggtaa aaccactgaa atattatcta aataacacgg
    12001 caaacgccgc aaatttaata aatttagctg ttgaacacgg tgtgagtaag tttatattta
    12061 gctcgactgc tgctacttat ggggagccta gtagcggcgt agtcgatgaa acaagcgagc
    12121 aaaatccgat caatccatac ggtagaagca agctcatgac tgagtggatc ttaaaagacg
    12181 ccgcgcttgc aaacagggat tttaaatttg gcattttgcg ttattttaac gtagctggag
    12241 caagcacgga cgggcttatc ggtcaaaatt atccaaacgc gactcatctt atcaaagtag
    12301 ccactcaaac gattactaga aaaagagaaa gtatgagtat ttttgggagt gattacgcta
    12361 caaaagatgg aacttgtgta agagattata tccatataga agatcttgca aatgctcatt
    12421 tggccgtact tgaatatcta aaaacaaatg atagtgatat atttaacgtg ggctatggta
    12481 gaggatttag cgtaaaagaa gtcgttcaaa cggctaaaaa agttggcgga gtggatttta
    12541 aagtattaaa tgccccacgc cgcgaaggag atccagctat gcttatatca gacgctagca
    12601 agcttagaaa taaaactagt tggaaaccga ctcgcgagag tttggagctc atcatcagct
    12661 cagctttaga gtgggagaag aaactaaaat agctaactgt ttagtttaaa tacccaaaat
    12721 ttacttatta aaaagccgct tacagtatat gcggctcctg caaatagttg agctatatat
    12781 gcatttatac ctaaactcag acaagtttta agcattaata gatttaatac ataagagata
    12841 agcatcgcta ttataaattt tataaactct tttttgtttc tattttttgt attaaaagta
    12901 aaaaatttat tcataaaata tgagaaaata attccgcaaa tatagcctat taaatttgag
    12961 atttccgcgc tatatccaat atacataagg gtaaatataa tcccaaagcc aacaatagta
    13021 tttaatactc ctacacataa atatcgtaaa aaatatgaat tagatagttt catttataaa
    13081 aactctataa caaaacagtt gttatcatat tttgtgattt tatggagcgg attttctacg
    13141 atctcaattg gctttttatt tttttgtccg cataggcctt ttgagagtat cggtgtccaa
    13201 tgttcataat gagccataag tccataagag ttgaacagcc aatttgcatc tagcatatta
    13261 tctatagcgt gatttctcat tattatagga aatgtttttg acgtgtttaa tgctattgga
    13321 gacataaaat tgtttttatt tacttcagag gtaaagccaa atttattatc ttttggtatc
    13381 attttataaa aatcatgcag cataatctca actctgtatt ttgcatattc tgtttgctct
    13441 ttt
//
LOCUS       DAPPKW010000048        13371 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.048, whole genome shotgun sequence.
ACCESSION   DAPPKW010000048 DAPPKW010000000
VERSION     DAPPKW010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13371
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.048"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(63..617)
                     /locus_tag="RPW04_001220"
     CDS             complement(63..617)
                     /locus_tag="RPW04_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDX6295311.1"
                     /translation="MARMKFYVDKNRCISCFACQVACSSAHEVPVGINRRKVITVNDG
                     IEGKEVSSTIACQHCTDAPCAQVCPVSCFYIRADGIVLHDKNKCIGCGYCLYACPFGA
                     PQFPRDGAFGIKGEMDKCTMCAGGPEETNSEAERHLYGQNRIAEGKVPMCAAVCSTNA
                     LLVGDATEVSNIYRKRVLIKNANI"
     gene            complement(632..3589)
                     /locus_tag="RPW04_001221"
     CDS             complement(632..3589)
                     /locus_tag="RPW04_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008341139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(3053..3055),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HDX6295312.1"
                     /translation="MSEAHIGRRSFLKLAALGAGSTMAFGKENETLRTATNEEIKNPF
                     PGSKKVRTICTICSAGCGIEAEVKDGVWIRQDMAIDHPISQGSHCCKGIDQIDLTKSK
                     QRVKYPMKKVNGKWERISWETAINEIGDKLLEIRKEDGPDCVEFLGSAKFSNEQAFYF
                     RKFAAFWGTNNIDHVARIUHSATVAGVANTWGYGAMTNHFGDVTANSKAILLIGANSA
                     VANPIGFKHMLQAKDRNNCKLIVVDPVYTKSAAKADYFVRLRPGTDIAFAYGMLHLIF
                     KNGWEDKEFIKTRSYAVDEIRKEAEHWTPQETENVTGIPAEQLIEITRVFATTKPATL
                     AWALGVTQHSVGSSNTRIYALLQLILGNVGKAGGGCNIIRGHDNVQGATDMNNLADSL
                     PGYYGLGDAAWKHFCKGWGQDYDKFIKRFATSVKEPREKLGDDVEGTKFKEYFYHDPK
                     TPEDRNWRNEKGYSLSKWWQGVLKEENTFSSGNLRVLWVQGTGITSMAHLTKIKEAID
                     KLDMLVVVEPFVNEVAILSDRKDGVYILPAATQFESSGYVSATNRSAQWRSQVIPPIY
                     ESKEDQEVMMLFAKKFGFYDEYVKGMMMDVVDGELKKVKDSFVWPDDATNEIARTTQS
                     IGNNGRTADRLKKHQENWINFDPDTLMGKPGSPVAGEYYGLPWPCWNKNHPGSPVLYD
                     VTKPVWKGGMGFRNRFGLEHNGVSQLADDSITIPGSKVKGGYPQITKDNIEKVLGITL
                     SEEEKAKMGSGWNMDYSGIIAKKCEEAGVSPCGNAKARAIVWEFIDQYPKHREPIHSP
                     RKDLVEKYPTFGDQAKNFRVSTKFESEQKAQDWSKDFPTIISSMRLVNLSGAGMIERT
                     SKYLAHITPEMFAHVNPELALKYGIQDGEMMWIHSPQGTKIKVKCIHSHSVTPDRICL
                     PYNFAGVMQGVDLSARYPEGTKPYTIGESSNTITNYGFDIVTQISEFNAGLCRLERAS
                     DQSTFKTAFFDEK"
     gene            complement(3600..3803)
                     /locus_tag="RPW04_001222"
     CDS             complement(3600..3803)
                     /locus_tag="RPW04_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HDX6295313.1"
                     /translation="MKNRREFLKKALQVGAIAGVGVAATGAFASKEYNESNQNGVVSG
                     KTKKKEVLYYKSEAWEKFYKIAY"
     gene            complement(3933..4610)
                     /locus_tag="RPW04_001223"
     CDS             complement(3933..4610)
                     /locus_tag="RPW04_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HDX6295314.1"
                     /translation="MSDLDIGRSYYYEFLSYPLFYSEDKKRYEEFIEQAIYLAKSPID
                     PSNDVDFANIIKFSFDEFKKEQNSVLFDLSYTNIPLSASFYDEGRDDGNKRLKVIEIL
                     KRSNFRRDTNKCSCSEDYLGFIFKLMATILKNNLALSRELFETLINDFSDEFAKMTKE
                     HEAADFFRSYANIYINFISLERAILGFKAPKFEKSIAEESLHKKPFQTKMATPKSKVM
                     WDEFTKI"
     gene            complement(4607..6268)
                     /locus_tag="RPW04_001224"
     CDS             complement(4607..6268)
                     /locus_tag="RPW04_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HDX6295315.1"
                     /translation="MQEFAFLYDNSEEIVLDDSIKTLNLPNDEEFLVSNSKSLNAQIY
                     APEINFYLNNTKENMLLKAKNSLKLYEARATAFDFALDADLSKSVSKNILLISDELEL
                     SVKKLENAGFKVICLNHNEVKFLYGEIGELVAIVLQKDGEFEIEFDILLVRNAKDYML
                     KQSGCFEIDGLEDYEILNLANKVSPVFNYKKIIAYDAQTCQYKSRRTKHCAKCVDACP
                     TVAIMKDDEIKELEFSDIDCIACGACISVCPSGSLEYNSMPRNGFYEVAKIYADKIVL
                     AFEECLDISNLSINLKENILPFPLKSVNFLDQSYLLTLLQTTGATVVLYAKQITSGTK
                     ESLELVNEIYEKIYGTKGIEVANDEESLKIALDRASFISNSKYDLNETNLSKREIFSK
                     RVLYMLNGKNHGKTGCGELVRYGRIIVNESSCTLCLSCVGACNVGALYADKSDNSLKF
                     NASICTTCGYCETSCAEKDTLTVIRDGMSLEPSYFEYKTLAKDELFKCAECGKEFATV
                     KSVKKIASMLEPVFNGNDLKIRTLYCCADCKAKLMMMSDLEKEDL"
     gene            6400..7728
                     /locus_tag="RPW04_001225"
     CDS             6400..7728
                     /locus_tag="RPW04_001225"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HDX6295316.1"
                     /translation="MRKAMNKLPKIDKIPNLKEFQNYFKPALLDISKSVLEEIRSKNQ
                     NETISEQDVINLIKNAYAKFQNIEPKPLINATGVIIHTNLGRSPISEDLIKQATHLMT
                     SYSNLEYGLSSGKRGDRYAYTSYLLKLLFGCEDALIVNNNAAAVFLILNSFADEKEVL
                     VSRGELVEIGGSFRVPEVMKNSGAILKEIGTTNKTHLSDYENSINENTAMILKVHKSN
                     YDIVGFSSEVSINDIAKLTQKRGILNYYDLGSGYVNTLPYSLSKDEPNVKKLIQSGVD
                     IISFSGDKLFGSVQCGIILGKKELINKLKNNQILRMLRVDKMVLSMLNETIKAYLNKD
                     FHLIKPINQIYKTLSELEVQAKKVLENIKLEASIKETKTFVGGGTMPNKSYPSIGLFF
                     KGNANKNEFKFRKYGIIGRIENAEFLLDFRSIFENDIENIIKIINGMSDE"
     gene            7721..9526
                     /gene="selB"
                     /locus_tag="RPW04_001226"
     CDS             7721..9526
                     /gene="selB"
                     /locus_tag="RPW04_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HDX6295317.1"
                     /translation="MNSIIIGTSGHIDHGKTALIKALNGYEGDKTSDEIKRGITIDLS
                     FSNLNNGIKNIAFIDVPGHENLVKTMISGAFQFDACMLVIAANEGLKPQTKEHIEILN
                     LLNVKNIILVFSKCDLVGKNEQLEVKNSVLDFIKDFSNLEILRSFFVSIKDKNSIDAL
                     KNYLFTIQRKTHDQDSVFRYYIDRVFQVKGHGTVVTGGVLKGTLKVGEQILNLDLNES
                     FILRNLEVHSRSAKTVEAPNRAALNLSGDKTYALKKGQILSKKGFWRGFFEADCFVSG
                     DLTHNSEVVFCVGSKQVNAKAALLKDNFFTFKFNKMMFLEFNEPFILLKNSRVIGGGF
                     VLNPVSEPLKKDVKSDLLSALNNMDFVQAFEILSRSHRHGFGLISSLQRFGMSTSTAL
                     DIASNLKNVFVDKKAACIYTNDGYSDVKEFIKFIINKNKDAMFSPSSINTKLSWASTD
                     FIEAVLNELETNKIVQKNGSIYTKFGTNFDELNTTVESKIYDILEKGYITPKAPYNIY
                     DELDIDKIVGDAALKKLTKAKKVVRLEHNLFISSNALNKVINMLRDIIKNEGKVNITS
                     VKNHLNLSRKYALAYLEYLDKFADIKKFENDRLFV"
     gene            9572..10312
                     /locus_tag="RPW04_001227"
     CDS             9572..10312
                     /locus_tag="RPW04_001227"
                     /inference="COORDINATES: protein motif:HMM:NF024498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin fold domain-containing protein"
                     /protein_id="HDX6295318.1"
                     /translation="MKNVLIISSLIAATSMFAINDAEILDLFKAASNEGLQVKIESKS
                     KLEGTNFDQIIVNITDGKQSQKQVLFTDGKYVFPDIIDVNKRVSYLGKFNDIQEKASM
                     GEAYSKLAALIKNLDKSKIINLGNDPKKPTKYLFTDPDCPYCRIELDRIEKDLEESNL
                     KVIMAPIPSHGEDAIKKSIAIYKEVKGVKDDATKIKILRKYYAKDASAPTNITADQVK
                     TEQANIMKYFETGAIRGVPAMIDESDLK"
     gene            10382..11059
                     /gene="pseF"
                     /locus_tag="RPW04_001228"
     CDS             10382..11059
                     /gene="pseF"
                     /locus_tag="RPW04_001228"
                     /EC_number="2.7.7.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid cytidylyltransferase"
                     /protein_id="HDX6295319.1"
                     /translation="MINNIAIITARGGSKRIPRKNIKDFMGKPMIYYAINAAINAGIF
                     DEIMVSTEDEEIASISKNLGAKVPFLRSTKTADDFATTNDVIEEVLSQYAKLGTLIEN
                     ICCIYPCAPFISGELLKEAYETFVSTNASKLTPVVKFSFPVQRAFIVDEKGFLKYREP
                     LNANKRSQDLKPTYHDAGMFYFYKANALNSDDRVPFILSENVTQDIDTMDDWKMAELK
                     YKVLHGL"
     gene            11049..11825
                     /locus_tag="RPW04_001229"
     CDS             11049..11825
                     /locus_tag="RPW04_001229"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295320.1"
                     /translation="MAYKIGLKLWSLNENYINSAANLYESGVYDYIELYSVPNSLNKI
                     KIWADLKLKFGIPFAIHAPHFSSGLDFSNKDKFSSNLKLVELARAYSLELDAIYTVFH
                     PGIGGNVDESIRQINSIKDFKFIIENKPYVVPMDNAPNAFCIGSTFEMIKKIIDQTGH
                     GFCLDIGHALVSANYQKLGIYEYIAKFNSLNPLVYHISDNDSTSIYDAHLHFGDGNID
                     FKKIHSIIDKDKFLAIETIKDSKENLDDFIKDSKFIKELK"
     gene            11822..12031
                     /locus_tag="RPW04_001230"
     CDS             11822..12031
                     /locus_tag="RPW04_001230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295321.1"
                     /translation="MNQKVALVIGASSESVFAINEAKKAGLKVVAFDGNKDAIGLRLA
                     DVSYVVDIRDPKNIIEKLTGGGTSL"
     gene            12061..12210
                     /locus_tag="RPW04_001231"
     CDS             12061..12210
                     /locus_tag="RPW04_001231"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295322.1"
                     /translation="MITTGSINDYYKLGGVSYKAADLCTDKLLFHKKLRNLTNETMGG
                     GIPSK"
     gene            12221..13024
                     /locus_tag="RPW04_001232"
     CDS             12221..13024
                     /locus_tag="RPW04_001232"
                     /inference="COORDINATES: protein motif:HMM:NF024925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HDX6295323.1"
                     /translation="MRPIECHLITPNLDLRVLKFPLIIKPRFGSGSRDVIAVKDQHEF
                     KNALAKIDLSKEDFLAETLVEGTEYGLSGAVINGKYIHILIREKLLTPLPYRQSIGNL
                     SAPEILEVTRYMQRVATRLNLKNCLINADLIITPEGEPFIIELAPRPSGHYLSSTFVE
                     ISTGVNMTKEWINMILGKPFSFEPKFTKHAIIRYFDFEGRVVPPNFEILKNELGIVKY
                     ECNINGILGKVINGASIMNRGYAIIVASNKQECLTNTDALIKKFKKEIK"
     gene            13021..>13371
                     /locus_tag="RPW04_001233"
     CDS             13021..>13371
                     /locus_tag="RPW04_001233"
                     /inference="COORDINATES: protein motif:HMM:NF025217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDX6295324.1"
                     /translation="MNESVKQAQENAYKLWGEHVSTGYLLYPNEYLTRYVFANRRSFK
                     TVLDFGCGDGRHLEMMSKAKIPHIIGVDYNKSVLQIAKNRCNENGVKCEVFQSGEVLN
                     LNEILGGEKVDCVVC"
BASE COUNT         4599 a         2444 c         2184 g         4144 t
ORIGIN      
        1 aaaatattaa tagaattgcc agttattaac aaaagttaat ctggcaaatt ctataaattt
       61 aatcaaatat ttgcattttt tataagtact cttttgcgat aaatatttga aacctcagtt
      121 gcatcgccga ccaaaagagc gtttgtagaa caaactgcgg cacacatagg taccttgcct
      181 tcggcaattc ggttttgacc gtagagatga cgctcggctt cactgtttgt ctcctcagga
      241 cctccagcac acattgtgca tttatccatc tcacctttga taccaaaagc accgtcgcgt
      301 ggaaattgag gagcaccaaa tggacaagca tataagcagt atccacagcc tatacattta
      361 ttcttatcat gaagaactat tccatcggct cttatgtaaa agcagctcac tggacaaact
      421 tgagcgcaag gtgcatcagt acagtgctga caagcaatcg tacttgatac ctcttttcct
      481 tctatgccgt catttaccgt gataactttt cggcgattta ttccgactgg aacttcatga
      541 gccgaactac aagcaacttg acaagcaaaa cagcttatac acctattttt atctacataa
      601 aatttcattc ttgccatact atctccttag ctcatttttc atcgaaaaac gctgttttaa
      661 atgtactttg atcacttgca cgctctaatc tacaaagtcc ggcattaaac tcggaaattt
      721 gagtaacgat gtcaaatcca taattagtga tagtatttga gctctcgcct atagtatatg
      781 gcttagtacc ctccggatat ctagcactta gatctactcc ttgcataact ccagcaaagt
      841 tatacggaag acaaattcta tcaggtgtta cactatgaga atggatgcat tttactttta
      901 tctttgtacc ttggggacta tgtatccaca tcatttctcc atcttgtatg ccatatttca
      961 aagcaagttc cggatttacg tgagcaaaca tttctggcgt tatatgagct aaatatttac
     1021 tagttctttc tatcataccg gcaccactta aatttactaa acgcattgag cttataatag
     1081 ttggaaaatc tttactccaa tcttgcgctt tttgctcgct ttcgaattta gtagaaactc
     1141 tgaaattttt agcttgatca ccgaaagtag gatatttttc aactaaatct ttgcgcggag
     1201 agtggatcgg ctctctatgc tttggatact gatctataaa ttcccacact atagctcttg
     1261 cttttgcatt tccgcaaggg cttacgcccg cttcttcgca ttttttagca attataccac
     1321 tataatccat attccaaccg ctacccattt tagctttttc ttcttcgctc aaagtaatac
     1381 ccaaaacttt ttctatgtta tctttggtaa tttgcggata tccgcctttt acttttgagc
     1441 caggaatagt tatagaatca tctgctaatt gacttacgcc attatgctca agtccaaaac
     1501 ggtttctaaa tcccataccg cctttccata caggttttgt cacgtcataa agcactggac
     1561 ttccaggatg atttttattc caacaaggcc atggaagacc gtaatactca cctgctacag
     1621 gactgcccgg ttttcccata agagtgtctg gatcaaaatt tatccagttt tcttgatgct
     1681 ttttgaggcg atctgcagta cgaccgttgt tgccgatact ttgagtagtt cttgctatct
     1741 cgtttgtagc atcatcaggc catacgaagc tatcttttac ttttttaagc tctccgtcta
     1801 caacatccat catcatacct tttacgtact catcataaaa accgaatttt ttagcaaaaa
     1861 gcatcattac ttcttgatct tcttttgact cgtaaatcgg aggtataact tgacttctcc
     1921 actgagctga acgatttgtg gcactaacat atccgctact ctcaaactga gttgcagcag
     1981 gcaatatata tactccatct tttctatcgc tcaaaattgc gacttcattt acaaacggtt
     2041 ctacgacaac aagcatatca agcttatcta tagcctcttt tatcttagta aggtgagcca
     2101 tagaagtgat accagtgcct tgcacccaaa gaactcttaa atttccgctt gaaaatgtat
     2161 tttcttcttt taaaacacct tgccaccatt ttgaaagaga gtaacctttt tcgtttctcc
     2221 agtttctatc ttctggggtt tttggatcat gataaaaata ctctttaaat ttagttccct
     2281 caacatcatc gcctaacttt tctctaggtt cttttacgct agttgcaaaa cgttttataa
     2341 atttatcata atcttgcccc caacctttac agaaatgttt ccatgcagca tcgcccaagc
     2401 cataataccc aggaagagaa tccgcaaggt tgttcatatc ggtcgcacct tgaacattat
     2461 cgtgaccacg gataatattg catccgccac cggctttgcc tacgtttcct aatatcagtt
     2521 gcaaaagtgc ataaattcta gtatttgaac ttcccaccga gtgctgagtt acgcctaaag
     2581 cccatgctaa agtcgcgggt tttgtcgtag caaaaactct agttatctct atgagctgct
     2641 ctgctggaat tccagtaaca ttctcagtct cttgcggagt ccaatgctcg gcttcttttc
     2701 ttatctcatc aactgcgtaa gagcgagttt ttataaactc cttatcctcc cagccgtttt
     2761 taaatattaa atgaagcatt ccataagcaa atgctatatc tgttcctggt ctaagtctta
     2821 cgaaataatc agcctttgcg gcagattttg tataaacagg atcaactacg ataagtttgc
     2881 agttatttct atcttttgct tgaagcatat gcttaaagcc aataggattt gcaactgccg
     2941 agtttgctcc gatcaaaagt attgcttttg aatttgctgt cacatcgcca aagtgattcg
     3001 tcatcgcgcc ataaccccaa gtattggcca caccggccac tgttgcgcta tgtcaaatac
     3061 gtgctacgtg atctatatta ttcgttcccc aaaaagctgc aaattttcta aagtaaaatg
     3121 cttgctcatt gctaaattta gccgaaccca aaaactcaac acagtctggt ccgtcttctt
     3181 ttctaatctc aagaagctta tcgccgatct cattgatagc agtttcccag ctgattcttt
     3241 cccatttacc atttactttt ttcatcgggt actttacacg ctgttttgac ttcgtaagat
     3301 ctatttgatc aataccctta cagcaatggc taccttgaga tataggatga tctatcgcca
     3361 tatcttgtct tatccaaacg ccatctttta cctcagcttc tataccacaa ccagctgaac
     3421 atatagtaca gatagtgcga actttttttg agccgggaaa tgggtttttt atctcttcgt
     3481 ttgtagcggt tcttaatgtc tcattctctt taccaaacgc catagtgctt ccagcaccaa
     3541 gagcagcaag ctttaagaat gagcgtctac ctatgtgagc ttcactcatt ttaagccttt
     3601 caatacgcta ttttgtaaaa tttttcccaa gcttcacttt tgtagtaaag cacctctttt
     3661 ttctttgttt taccgcttac aacgccattt tgatttgatt cgttgtattc tttagaagca
     3721 aaagctcctg tggcggctac tcctacacca gctattgcac ctacttgcaa agctttttta
     3781 agaaattctc ttctgttttt caaagcaact ccttgtatca taagtaaaat atattttact
     3841 tatttgtttt attctacttt aaagagtatc aaaatcgaat aataagttaa tactaataat
     3901 ttaaatttat ttaagtttca aaatatataa atttatatct tagtaaattc gtcccacata
     3961 accttgcttt ttggagttgc cattttagtt tgaaatggtt ttttatgtaa agactcttcg
     4021 gctatacttt tttcaaattt aggagcttta aatcctaaaa tagcacgttc aagactaata
     4081 aaatttatat aaatattagc ataagatcta aaaaaatctg cagcttcatg ttcttttgtc
     4141 atcttcgcaa actcatcaga aaagtcattt atcaaagttt caaaaagctc tcttgagaga
     4201 gctaaattat tttttaatat tgtagccatt aacttgaaaa taaagcccaa ataatcctca
     4261 gagcagctgc acttattcgt atctcttcta aaattgcttc tttttaagat ttctataact
     4321 ttcaaacgct tattgccatc atctcttccc tcatcataaa agctagcact tagaggaata
     4381 tttgtataac taagatcaaa taaaacagaa ttttgctctt ttttaaactc atcaaaacta
     4441 aatttaataa tatttgcaaa atcaacatca tttgatggat ctataggact tttagcaagg
     4501 taaatggctt gttctataaa ctcttcataa cgttttttat cttcactgta aaatagcgga
     4561 taagataaaa attcataata ataacttctt ccaatatcta aatcgctcat aaatcttcct
     4621 tttctaaatc actcatcatc ataagttttg ctttacaatc agcgcaacaa taaagcgtcc
     4681 taatcttcaa atcatttccg ttaaatacag gctcaagcat ggaagctatc tttttaacgg
     4741 atttcacggt tgcaaattct ttgccgcatt ccgcgcattt aaataactca tctttagcca
     4801 aagttttata ctcaaaatag ctcggctcaa gactcattcc gtctcttatg accgttaacg
     4861 tatctttttc ggcacagcta gtctcgcaat acccgcaagt agtacaaata gacgcgttaa
     4921 atttaagcga attatcgctc ttatcagcat ataacgctcc aacattacaa gctcccacac
     4981 acgataaaca aagagtacag ctgctttcat ttacaatgat tcttccatat cttactaact
     5041 caccacagcc tgttttacca tggtttttac catttaacat atataaaact cttttagaaa
     5101 aaatttctct tttgctaaga tttgtctcat tgagatcata tttactattt gatataaatg
     5161 acgctctatc caaagctatt tttaaactct cttcgtcatt tgctacttct atgcctttag
     5221 ttccatatat tttttcataa atttcattaa ccagctcaag actctctttt gtgccgcttg
     5281 ttatctgttt tgcatataaa accacggtgg cgcctgttgt ttgaagcaga gtcaaaagat
     5341 aagactgatc taaaaaattt actgatttta gaggaaaagg aagtatgttt tcttttaaat
     5401 ttatacttaa atttgagata tccaaacact cctcaaacgc caaaactatt ttatccgcat
     5461 atattttagc aacttcataa aatccatttc ttggcatcga attatactca agcgatccgc
     5521 tcggacagac gcttatacag gctccgcaag ctatgcagtc gatatctgag aactcaagtt
     5581 cttttatctc atcatctttc attatagcaa cggtaggaca ggcatctaca catttagcgc
     5641 aatgctttgt tcttctactt ttgtattgac aggtttgagc gtcataagca attatttttt
     5701 tataattaaa cacgggactt actttatttg caagatttaa aatctcataa tcttctaaac
     5761 cgtcgatctc aaaacaaccg ctctgtttta gcatataatc tttagcattt ctgactaaca
     5821 aaatatcaaa ctctatctca aactcaccat ctttttgcag tactatagct actaattcac
     5881 ctatctctcc atataaaaac ttaacttcat tatgatttaa gcaaattacc ttaaatcctg
     5941 cattttccag cttttttaca gataactcca actcatcgct aattagtaaa atatttttac
     6001 tgacgctctt tgataaatca gcgtctaaag caaaatcaaa cgcggtagct ctagcttcat
     6061 aaagcttcaa tgagttttta gcttttaata gcatattctc tttggtatta tttagataaa
     6121 aatttatctc cggagcatat atctgagcat ttaaggactt tgaattagaa actaaaaact
     6181 cttcatcatt tggcaaattt agagttttta tactatcgtc aagaactatt tcttcgctat
     6241 tgtcatataa aaatgcaaac tcttgcataa ttttccttga ttaaaatatt atactcattt
     6301 tataatcatt tgtataaatt taggctgatt atttataact aataattaac ttaaaaggaa
     6361 aatcaaaact aaaaaatgat atactgagtt taaatttaaa tgagaaaagc tatgaataaa
     6421 cttccaaaaa tagataaaat tccaaatcta aaagagtttc aaaactattt taaaccagca
     6481 cttttagaca tctctaaatc agtattagaa gagataagaa gtaaaaatca aaatgaaact
     6541 atatcagagc aagatgttat aaatttgata aaaaacgcat acgccaagtt tcaaaatatc
     6601 gagccaaaac cgcttataaa cgcaactgga gttataatac ataccaacct tggcaggagt
     6661 cctatcagcg aagatttaat taaacaagca actcatctta tgacttcata ctcaaattta
     6721 gaatacggct taagcagcgg caaaagaggc gatagatacg catatacaag ctatctttta
     6781 aaactgctat ttggttgtga agacgctctt atagtaaata ataacgcagc cgcagttttt
     6841 ctcatattaa atagttttgc cgacgagaaa gaagtactgg ttagtcgcgg tgaattagta
     6901 gaaatcggtg gaagtttcag agtaccagaa gtaatgaaaa acagcggagc tatattaaaa
     6961 gagattggca ctacaaacaa aacccatcta agcgattatg aaaactccat aaatgaaaac
     7021 accgccatga tcttaaaagt acataaatca aactatgata tagtcgggtt ctccagcgaa
     7081 gtttctataa atgatatcgc gaaattaacc caaaaaagag gaattctaaa ctattacgat
     7141 cttggtagcg gatatgtaaa tacgcttccg tattctctaa gtaaagatga gccaaacgta
     7201 aaaaaactga tacaaagtgg agttgatata ataagtttta gcggtgataa gctttttggc
     7261 agtgtgcaat gcggcataat acttggtaaa aaagagctta taaataagct taaaaacaat
     7321 caaattttaa gaatgttaag agtcgataaa atggtgctta gcatgttaaa tgaaacgata
     7381 aaagcgtact taaacaaaga ttttcatctc ataaaaccta taaatcaaat ttataaaaca
     7441 ctaagcgaac tagaagtaca agctaagaaa gttttagaaa acatcaaact agaagctagc
     7501 ataaaagaga ctaaaacttt tgtcggcgga ggaacaatgc caaataaaag ctatccatca
     7561 atcgggttat ttttcaaagg aaacgcaaac aaaaatgagt ttaaatttag aaaatacgga
     7621 atcataggca gaattgaaaa cgcggagttt ttgcttgatt ttcgttctat ttttgaaaat
     7681 gatatagaaa acatcataaa aattataaac ggaatgagtg atgaatagca taataatagg
     7741 aacctcaggt catatagatc acggaaaaac agcacttatc aaagctttaa acggctatga
     7801 aggcgacaaa acatcagacg agataaaacg cggtattacg atagatctta gtttttcaaa
     7861 tttaaataac ggaattaaaa atatagcatt tatcgatgtt cctggtcatg aaaatttagt
     7921 caaaactatg ataagcggag catttcaatt tgacgcttgt atgctcgtaa tagcagccaa
     7981 cgaaggactt aagccacaaa caaaagagca tatagaaata ttaaatttac taaatgtaaa
     8041 aaatataatt ttagtatttt caaaatgtga tttggtaggt aaaaatgagc aattagaagt
     8101 caaaaacagt gtattggatt ttataaaaga tttctcgaat ttagaaattt taagaagttt
     8161 tttcgtcagt ataaaagata aaaacagcat agatgcgcta aaaaattatc tttttacgat
     8221 ccaaagaaaa acgcatgatc aagactctgt ttttcgctac tacatagaca gagtttttca
     8281 agtaaaaggt catggcacgg tcgtcacagg aggcgtatta aaaggcactc taaaagtcgg
     8341 ggagcaaatt ttaaacttgg atttaaatga aagttttata ttaagaaatt tagaagttca
     8401 ttctaggagc gcaaagacgg tagaagctcc aaatagagcc gcgttaaact taagcggaga
     8461 taaaacttac gctttaaaaa aagggcaaat tttaagcaaa aagggatttt ggagaggatt
     8521 ttttgaagct gattgttttg tgagcggaga tttgactcac aatagtgaag tcgttttttg
     8581 cgtcggatct aaacaagtca atgcaaaagc cgctctttta aaagacaatt tttttacatt
     8641 taaatttaat aaaatgatgt ttttagagtt taacgagccg tttattttac tgaaaaatag
     8701 cagagttata ggcggcggat ttgttctaaa tccagtaagc gaacctctta aaaaagatgt
     8761 taagtcagat ctactttcag cgctcaataa tatggatttc gtacaagctt ttgagatttt
     8821 aagcagatca catagacatg gttttggact tatatcgtct ttgcaaagat ttggaatgag
     8881 tacaagcacg gcactagata tagcttcaaa tttaaaaaat gtttttgtgg ataaaaaagc
     8941 ggcttgtatc tacacaaatg acggctatag cgatgttaaa gaatttatca aatttataat
     9001 aaacaaaaac aaagacgcca tgttctctcc atctagcata aatacaaagc tgtcttgggc
     9061 aagtacggat tttatagaag ctgttttaaa tgagctagaa acaaataaaa tagtccaaaa
     9121 aaacggaagt atttatacta aattcggaac taatttcgat gaattaaata caacggtaga
     9181 aagtaaaatt tatgatattt tagaaaaagg atatattact ccaaaagcac cgtataacat
     9241 atatgatgag cttgatatcg ataaaatagt aggagacgcg gctctaaaaa agctcacaaa
     9301 agcaaaaaaa gtagtaagac tagaacacaa cctttttata agctcaaatg cattaaataa
     9361 agtgataaat atgctaagag atataataaa aaatgaaggt aaagtaaaca taaccagcgt
     9421 taaaaatcat ctaaatttaa gtagaaaata tgctttggcg tatttagaat atcttgataa
     9481 atttgccgat atcaagaaat ttgaaaacga taggcttttt gtttaaaaac aacgcctata
     9541 atgtttgaaa ttttatattt taaggtaaca gatgaaaaat gttttaatta taagttctct
     9601 aatagcggct acttccatgt ttgctataaa cgatgcggag attttagatc tctttaaagc
     9661 tgcttcaaat gagggtttgc aagtaaaaat agagtcaaaa tcaaagcttg aaggtacaaa
     9721 tttcgaccaa attatagtaa atatcacaga tggaaaacag agccaaaaac aagttttatt
     9781 tacagatggc aaatatgtat ttccagatat catagacgta aataaaagag tatcttatct
     9841 aggtaaattt aacgatatac aagaaaaagc ctctatgggc gaagcttata gcaaattagc
     9901 agcacttata aaaaatcttg ataaatcaaa aattatcaat ctaggaaatg accctaaaaa
     9961 acctacaaaa tacttattta ccgatccgga ctgtccatat tgcagaatcg aacttgacag
    10021 aattgaaaaa gatttagaag aatcaaattt aaaagttatc atggctccaa ttcctagcca
    10081 cggcgaagat gcgataaaaa aatcaatcgc gatatataaa gaggtaaaag gcgtaaaaga
    10141 cgatgccaca aagataaaaa ttctaagaaa atactatgcc aaagacgcat ccgctccaac
    10201 taatataact gccgatcaag taaaaacaga acaagcaaat ataatgaaat actttgaaac
    10261 aggtgctata agaggcgtac ctgcaatgat cgacgagagc gatctaaaat aacatggggc
    10321 ttataaagcc ctatcctaaa tttatgctat cattgcagat aaaattctca aggaacaaaa
    10381 cttgataaac aatatagcta ttataacagc gcgcggcgga agcaaaagaa ttccgcgtaa
    10441 aaatatcaaa gattttatgg gaaaacctat gatatattac gctataaatg ccgctataaa
    10501 tgccggaatt tttgatgaga tcatggtttc aaccgaagat gaagagatag ctagtatctc
    10561 taaaaattta ggcgcaaaag ttccgttttt gcgaagcacc aaaacagcgg atgactttgc
    10621 tactacaaac gacgttatag aagaagtact aagccaatac gccaaactag gaactcttat
    10681 cgaaaatata tgctgcattt atccttgcgc accgtttata agcggcgaac ttttaaaaga
    10741 agcgtatgaa acattcgtat ctacaaatgc gagcaaatta actccagtag tcaaattttc
    10801 atttcccgtg caaagagctt ttatagtaga tgaaaaaggt tttttaaaat accgcgaacc
    10861 gcttaacgca aataaaagat ctcaagatct aaaaccaacg tatcatgacg ccggaatgtt
    10921 ctatttttat aaagcaaacg cgctaaactc tgatgataga gtaccattca tcttaagtga
    10981 aaatgttaca caagatatcg atactatgga cgattggaaa atggcagagc ttaaatacaa
    11041 ggtgttacat ggcttataaa atcggtctta aactatggtc tttgaatgaa aattatataa
    11101 atagtgcggc aaatctttat gaaagtggag tttatgacta tatcgagctt tactcagtgc
    11161 caaactctct taacaaaatc aaaatttggg cggatctaaa acttaaattc ggtattccat
    11221 ttgctattca tgctccgcat tttagcagcg gtttagattt ttcaaataaa gataaattta
    11281 gttcaaattt aaaactagta gaactcgctc gtgcttatag ccttgagctt gacgctattt
    11341 acactgtttt tcatcctggt atcggcggca atgttgatga aagtataaga cagataaata
    11401 gtataaaaga ttttaaattt ataatagaaa acaagcctta cgtagtacct atggataacg
    11461 ctccaaacgc attttgcatc ggttcaactt ttgaaatgat aaaaaaaata atagaccaaa
    11521 caggacatgg attttgcctt gatatcggtc acgccctagt aagcgcaaac tatcaaaaac
    11581 tgggtattta cgagtacatt gccaaattta actctttaaa tccgcttgta tatcatataa
    11641 gcgataacga tagcacaagc atttatgacg cgcatttgca ttttggagat ggaaatattg
    11701 attttaaaaa aatccactct atcatagata aagataaatt tcttgctata gaaaccataa
    11761 aagatagcaa agaaaattta gatgatttta taaaagattc taaatttata aaggagttaa
    11821 aatgaaccaa aaagtcgctc tagtaatagg tgctagtagc gagagtgttt ttgccatcaa
    11881 tgaagccaaa aaagccggac ttaaagtcgt agcttttgat ggaaataaag acgcaatcgg
    11941 actaaggctt gccgacgtat cttacgtagt tgatataaga gatccaaaaa acatcataga
    12001 aaaacttacg ggggggggta cgagcctata acgattttac cggttcccat cggtagatac
    12061 ttgataacga ccggaagtat aaatgactac tacaaactag gcggtgttag ctacaaagcc
    12121 gctgatttat gcacggataa acttctattt cataaaaaat taagaaatct aactaacgaa
    12181 actatggggg ggggtattcc ctccaagtga ggaaggggat ttgagaccta tagaatgtca
    12241 tttgatcact ccgaatttag atttaagagt acttaaattt ccacttatca ttaaaccgcg
    12301 atttggaagc ggaagcagag acgtcatagc ggtaaaagat caacatgaat tcaaaaatgc
    12361 tttagcaaaa atagacttaa gcaaagaaga ttttttagct gaaacattag tagaggggac
    12421 ggaatatgga ctaagtgggg cagtgataaa tggaaaatat attcacatac ttataagaga
    12481 aaaactcctt acgccgcttc cttatcggca aagcatagga aatttgagtg ctccggagat
    12541 tttggaagtc acacgctata tgcagcgagt cgctactagg ctaaatttaa aaaactgcct
    12601 tataaacgcg gatctcatca taacgcctga aggagagccg ttcatcatag agctagctcc
    12661 acgtccaagc ggtcactatc tctcaagtac gttcgtagag atatcaactg gcgtaaatat
    12721 gactaaagag tggataaata tgattttagg caaacccttt agttttgagc ctaaatttac
    12781 aaaacatgcg attatcaggt attttgattt tgaaggtaga gttgttccgc ctaatttcga
    12841 aattttaaaa aacgagcttg gaattgtaaa atatgagtgc aacataaatg gaatcttagg
    12901 caaagtgata aacggtgcaa gcattatgaa tagaggatat gccatcatag tagctagcaa
    12961 caagcaagag tgtctaacaa atacggacgc tcttataaaa aaatttaaaa aggagataaa
    13021 atgaacgaaa gtgtaaaaca agctcaagaa aatgcttaca aactgtgggg agaacacgta
    13081 tctactggat atttattata tccgaacgaa taccttacaa gatatgtttt tgcaaacaga
    13141 aggtcgttta aaaccgtttt agactttggg tgcggcgatg gaagacacct tgaaatgatg
    13201 agcaaagcaa agattcctca tataatcggc gtggattata ataaatccgt tttacaaata
    13261 gctaaaaatc gctgtaatga aaacggcgta aaatgcgaag tatttcaaag cggagaagtt
    13321 ttaaatttaa acgagatatt aggcggagaa aaagttgatt gcgtagtttg c
//
LOCUS       DAPPKW010000049        13300 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.049, whole genome shotgun sequence.
ACCESSION   DAPPKW010000049 DAPPKW010000000
VERSION     DAPPKW010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13300)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13300)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13300
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.049"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..474
                     /locus_tag="RPW04_001234"
     CDS             <1..474
                     /locus_tag="RPW04_001234"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295325.1"
                     /translation="ASTWIHNGVNDKTGQAYSLHKMAITIRPEIKNEAGEITQQQERI
                     FATKNRNGVKGYSFDSTNDKALEKEFLNNISKGFNLGLAAEKNETLAKNPKLMEIINK
                     IPDRSAVTINYDFVKQQGIVVMPETMKSVSKSINKGAEILNGELNQEQKSQGFDR"
     gene            619..2868
                     /locus_tag="RPW04_001235"
     CDS             619..2868
                     /locus_tag="RPW04_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012662275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase 3"
                     /protein_id="HDX6295326.1"
                     /translation="MGRLFIAEKPELARAIAKGLNGNETKSNGFIKKGDDTITWAFGH
                     ILELYKPDDYAEKYKKWDLADLPFEIEKFKYKPIEKSKEQLNIILNLLKNKGINEVVH
                     CGDADDEGQILVDEILQYANNKLPVKRLLINDLSEAGIKKELNNIRSNDDFYGLSQRG
                     FARSLADWIVGLNLTRAYTVTARKKGYQDGVLNLGRVQTPILSLVVNRDQENENFKSL
                     EYFAISGEFKSFDGIEFRANLKVDDKITDREIAQNIAKECEDKTARITTKKTENKKEL
                     PPLPYNLLKLQAECAKELGLKPDKVLSITQNLREKFHLITYNRSDCEYLPETMYDEAP
                     NIMQSLKELFNGTKDLELNGILQNADLGIKSTAFNSANISAHHGIIPTGAKANLNELS
                     KDELNIFMMISKRFALQFFTAREYEATSIIVEIDGYKFTASQNVTTDLGFTFYLKPQN
                     DDKKDNNSDEVENTSRLVDLLEGSTADCIKIKLDAKKTKPKPFYTMATLLTDLTGVAK
                     YAKNPNIKKLLLEKDQGKKGENGGIGTPATRSNHIKSLIDNDFISVSDDKKQVIHATQ
                     KGKDLIAVAPEILTSVDMTALWFEKQKMIESRDLSLDDFLAEINKQIKEEIEKVKDSD
                     MGNFGARPQDAITCPMCNKGYLIRRESQNKKGVFWWGCSKWRNDCKAFFYDNNGKPQL
                     EAKPKQEIPNDAQICPKCKSGKLLPKTSQKGFNYFACNGKLKNGNWCNAKFKTNDSGE
                     LEEMIFDKK"
     gene            2878..4146
                     /locus_tag="RPW04_001236"
     CDS             2878..4146
                     /locus_tag="RPW04_001236"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295327.1"
                     /translation="MLDYTNSKYINESTNAILNDLNDNLKDKYSSGVKQNLKELYKNE
                     VKQKIEKMGERNPQIADFLNEMYANSNYNMDEFNPKYLKENQEKYKDQKGGIVASIID
                     KNDKAQSSYQLESFFEKYDQIFDKNTPHDKIIDRVASRFLELNSELHNKIEHNTIYNK
                     AEQNLSKTLSDNIITRINIEVDPKEIKSGYEVDKFKKLLNSGKEFKGDENKALFQTLK
                     MMDKALMDENNKDFKVVYEKVGLDFTDINGNKIKIDAKLGEGYFQKDLDHLIRVGCND
                     CNIGNASKIANKLFINSIELKDPNLEQNKEPTKEIDKGLEFKSPATLDNFEKCLKGSM
                     EATAALAESIGDESITAFTQNLSRVAGISGLGKHISNTIASQNDKSQSKEVMNRLGLA
                     YEEKVKSGAIKLPKEKVIEHSNQKSLGASR"
     gene            4143..4640
                     /locus_tag="RPW04_001237"
     CDS             4143..4640
                     /locus_tag="RPW04_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019108607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HDX6295328.1"
                     /translation="MKFLKQFKIINNYKKLFIIILFSCSALNAVNLPNINETKFNWLF
                     YKFGKEFDIPPILLWAIAKTESNFDIKAKNINTNGSSDYGLMQVNSIHEPTLKAKNLS
                     LDDLYRPEINIQMGAMVLKGCLDKHGWDYKALNCYNGKVDNNPYSRKVFINLRTLKQE
                     RRVIK"
     gene            4637..5857
                     /locus_tag="RPW04_001238"
     CDS             4637..5857
                     /locus_tag="RPW04_001238"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295329.1"
                     /translation="MNLHRDDTRAFLEYIGFDVDSHYKFKMRQDEHTASASIDPKNGY
                     IKDFGSGFRGDVIAFYKEVKSCDDVTAFAEVKVILDDLKISNEINRDYHTGSTKHNVN
                     RKQETIEQEIIRTLTNKNLTAGQVFESLCKEKNIKEGSDKADSFYDRICDTMSDLSKK
                     NILNLDIQSDVYSINLEKQIKQEPKVEYLDENIMQKYENERRENFTRYQELLTRLLPA
                     CDNAKRKELAQKFQIGYSKSEDRLIMPMRDENSGIITLWKYNPNLNIKYTFSKDRPRT
                     AFNILNLKEYTKDDRPIFIAEGEKDCLNMLSRGYKAISLGSANAKFKTSQAQILKDCY
                     VVIAYDYDEAGKNGSKALKEQLNGICKTVEIIDWEKILKHNNLEINLKKGFDFTDFLE
                     LSAKQRERKQGFDR"
     gene            5854..6108
                     /locus_tag="RPW04_001239"
     CDS             5854..6108
                     /locus_tag="RPW04_001239"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295330.1"
                     /translation="MTKTKNNNNNKEKQKKKQVVIYLEEEELEYLDYIYNKKYFPTRA
                     AYIRMLINEDKEIITKPIQNKSFLIDCKKISKFATPKTTR"
     gene            6105..6320
                     /locus_tag="RPW04_001240"
     CDS             6105..6320
                     /locus_tag="RPW04_001240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295331.1"
                     /translation="MTVDRQYKSEWRSGALEEYKNWDKAQKAKMLEKLKEQNQNIQIP
                     VAQSAIKPAQATIAQREEKSTDKGRGF"
     gene            6523..7233
                     /locus_tag="RPW04_001241"
     CDS             6523..7233
                     /locus_tag="RPW04_001241"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295332.1"
                     /translation="MLPNTPQDYPTGFAVPIWYAHLIEQVGEDAIEKLGFYPNERLLE
                     SAKNLVAKQDQTLANFFSQKIFWGIFYKNHGSEEEALAVNNRRIIPLVWLRQIADSKF
                     ASSLKEIAKIAKNDLEQLIYEAILYQEFFELQILIKDESIAWLKNNATKGEILRHHGF
                     NEMLGYKYFLKRVREGLMFSDKTYENGFDERKLPKFSQMVADGDGAFLPCSLLKNELH
                     FGGGNWQIEYEFVADGDY"
     gene            7301..7618
                     /locus_tag="RPW04_001242"
     CDS             7301..7618
                     /locus_tag="RPW04_001242"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295333.1"
                     /translation="MKNLSKVVLGALVAVIFIGCGEEAKFGDKEYTHDYLNDKVNAKT
                     LVELVEFCEANKNANLSTIQMKNCELGSFIKHKKNQRWSLLTGDNEPTEWEKLVQQYG
                     SKK"
     gene            7643..8305
                     /locus_tag="RPW04_001243"
     CDS             7643..8305
                     /locus_tag="RPW04_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012000853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDX6295334.1"
                     /translation="MVIAICNEKGGSGKTNIAINLAIKLALVGDDTLLVDADPQRSID
                     VFTDIRADSSLPLLFNSVSKLGSSMLKEIQSLKQKYDSVVIDTGGRDSQEMRQALAVC
                     DIAIIPVIPSDLDIAVLNKMILVFNQAKIYNPTAKALIVISKASPNPFLAKKVEALRE
                     YISEKNLDDIFLAHSIIYEREAYRNALSSGMGVVEYCKNGENAKLDFEGFFDELVKFV
                     NN"
     gene            8373..8684
                     /locus_tag="RPW04_001244"
     CDS             8373..8684
                     /locus_tag="RPW04_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005869828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HDX6295335.1"
                     /translation="MLTKDEILDYLKEIKPKLQEDGIVKLGLFGSFAKDTADIASDVD
                     ITIETTGDFVKKHSWGGIIYLDNLRERFMRKFKRQVDLCDTASMSKQKQQNLLTGVIY
                     V"
     gene            8806..9108
                     /locus_tag="RPW04_001245"
     CDS             8806..9108
                     /locus_tag="RPW04_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014666309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF86 domain-containing protein"
                     /protein_id="HDX6295336.1"
                     /translation="MHLIVCNENIDKLMYSDEIDIKSILSQKELRGIKAIRNIAAHDY
                     EGLDFSIIHDVVKYYLPSIKTNIDRFLVSQKEIGGSSGSNVHKVSNDTAKSKEKEK"
     gene            9112..9948
                     /locus_tag="RPW04_001246"
     CDS             9112..9948
                     /locus_tag="RPW04_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015453712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HDX6295337.1"
                     /translation="MDGGVNLGNFLKNNNERDYWLDVCVRMAHHSTAIEGNTLSQDET
                     ASILLDGYIAKATSEREFYEVKNYRQILPKMFSSLQEKAKIDEKLIKDFHRLIMNNLI
                     DNNGKFKTIENLVVGANFEPTKPYLVPVAIKDMCDNLYFRLDNAKNDDDKLKAILQSH
                     IKFEKIHPFSDGNGRTGRIIMIYGCLENNLAPIIIPKEQKNRYIAILRNNDIDGFMAF
                     AKEIEKDEISRRNKFLSQRPNEQDNSKSVLSRLGNAYAKKLESGAIKALNDTANSKEK
                     ER"
     gene            9948..10868
                     /locus_tag="RPW04_001247"
     CDS             9948..10868
                     /locus_tag="RPW04_001247"
                     /inference="COORDINATES: protein motif:HMM:NF014691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HDX6295338.1"
                     /translation="MQEQYTEIKDSNIINKQNIDIAVGLGLVDDLKPSEYFYKAVEKS
                     RTYNELEDNVKKYYDGKKLDKKEVGEKECDIVSVNIAKYLEKSGFTLSPVTLKTIHKN
                     LFWDAFPQGLEKYVGVFRDVNISKKEEVLGGEKSVEYGNYDELGDMLDYDFDREKRKD
                     YAKMTRQEQALNVGKFVSGVWQIHPFREGNTRTIAVFTIKYLQSKGFEANNDIFKENS
                     KYFRDALVLANYDNMKENIKSDFSYLESFFNKFILNKNIELKLLPNSPKGHKSEKSVL
                     SRLGAAYDKKVQSGAIKQPQISKKSKEKER"
     gene            10868..11137
                     /locus_tag="RPW04_001248"
     CDS             10868..11137
                     /locus_tag="RPW04_001248"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295339.1"
                     /translation="MGILDKKKEFAFVNNASVAASSNVSEFINSGAADKKEDRKSNAG
                     RPRKEGEKPVAVAIYLMPSEKERLENEAKEQFISLSGYLKQKLLA"
     gene            complement(11146..12483)
                     /locus_tag="RPW04_001249"
     CDS             complement(11146..12483)
                     /locus_tag="RPW04_001249"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295340.1"
                     /translation="MSRKLKSYLDDDNFLKAKKVWSEFERKQGKYFNSPQSFKDKIWN
                     NYISSKGFITQKFNKAQRDYTTKLLTKKNGYNSQVLIKITGSDKNFNQLKNHIKYISR
                     DELLDVFINDPSSGGDIFCSKNLDETAAFFQDGIYNIPSKKDIEEDQNLKEKNEVLHM
                     VFSMKGENNIPVDDIKNAAMKTIKEKFPNNLFILAIHNDTDNPHCHLDLKTVDCNGNR
                     IKIAPVDLDDLRNEFAKNLTELGYKATNFSRKQKEFARDKYPDPWDGHKPHHYKITGY
                     GKAKYNFSLEEHVEESYYVKFETRKGKETILWGKHLEKLMEQYNITNGDWARFTVTDQ
                     EAVVKKIYDKKTKQWYEKTVYKNVWDCSVEGKREVELKPLSESEKKKSEYKILGEEKS
                     QASNITLQSQTINKRQNKNGVSKAKALQNTQKTDKIRSNDSKETAVKKHDFQR"
     gene            complement(12480..13043)
                     /locus_tag="RPW04_001250"
     CDS             complement(12480..13043)
                     /locus_tag="RPW04_001250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295341.1"
                     /translation="MAKELKAFRIDGENLEYLQSLKEKMQVKSLNETVNLLLFFLQRD
                     KNFADTIKENYPLLQIKNTNLYKENTKEVKNFFTDDEFEILKKLGKENGFSSVNKFSK
                     FLVLSHMYDEKILSNDTINEFARVNYSIKRVGINLNIFLRAIQQDGATYFDKGAVDEL
                     VNQIKQQVLEAEKFIKEQKKFLRVKLR"
BASE COUNT         5102 a         2032 c         2386 g         3780 t
ORIGIN      
        1 gcctctactt ggatacacaa tggtgttaat gacaaaacag gacaagccta tagtttgcat
       61 aaaatggcaa taacaattcg tccagagatc aaaaatgaag caggagagat cactcagcag
      121 caagagcgaa tttttgctac aaaaaatagg aatggcgtaa aaggctattc atttgatagc
      181 acaaatgaca aagcccttga aaaagagttt ttaaacaata tttcaaaagg ctttaatctt
      241 ggtcttgcag ctgagaaaaa tgagactttg gctaaaaatc caaagctaat ggaaatcata
      301 aataaaattc ctgatcgatc agcggtaaca ataaactatg attttgtcaa gcaacaaggc
      361 attgttgtaa tgcccgaaac gatgaagtca gtttcaaaat caatcaataa aggtgccgaa
      421 attctcaatg gcgagctaaa tcaagagcaa aaaagtcaag gctttgacag ataatcttgc
      481 attaactttt ttgccaaatt tggggctaaa atggtggttt tagccctatt aaaattataa
      541 taaaaaataa ttttaaaatg tattaaaaaa taaaatataa tttaaaacta tttttaaatt
      601 tagtaaagga ttaaaaaaat gggtagatta tttatagccg aaaagcctga actcgcacgt
      661 gcaatcgcaa aaggtttaaa tggcaatgag actaaaagca atggctttat taaaaaaggt
      721 gatgacacta taacttgggc ttttggacat attttagagc tttataaacc tgatgactat
      781 gcagaaaaat ataaaaaatg ggatttagca gatcttccat ttgagataga aaaattcaaa
      841 tataagccga tcgaaaaaag caaagagcaa cttaatataa ttttaaattt gctgaaaaat
      901 aaaggcataa atgaagtcgt ccactgcggc gatgcagatg atgaggggca aattttagtt
      961 gacgaaattt tacaatacgc aaacaataaa ttgccagtca aaagacttct tataaacgat
     1021 cttagcgaag ccggaataaa aaaagagtta aacaatatta gatcaaacga tgatttttat
     1081 ggcttatcac aacgtggctt tgccaggagc ttagccgatt ggatagttgg acttaatctt
     1141 actcgtgcat acacggttac agcaagaaaa aaaggttatc aagatggtgt tttaaatctc
     1201 ggcagagtgc aaacacctat tctttcctta gtggtcaata gagatcaaga aaatgagaat
     1261 tttaaaagtt tggaatattt tgcaattagt ggcgaattta aaagttttga tggaatagaa
     1321 tttcgtgcaa atttaaaggt tgatgataaa attaccgata gagaaatagc tcaaaatatt
     1381 gcaaaagagt gtgaagataa aacagctaga attacaacaa aaaagactga aaacaaaaaa
     1441 gagctgccac cgcttcccta taatttacta aaactacaag ccgagtgcgc caaagaactt
     1501 ggcttaaaac ctgacaaagt cttgtctatt actcaaaatt tacgagaaaa atttcatctt
     1561 ataacatata atagaagcga ctgcgaatac ctgcccgaaa ctatgtatga tgaagcacca
     1621 aacataatgc aaagcctaaa agagcttttt aatggcacaa aggatttaga gctaaatgga
     1681 attttacaaa atgctgatct tggtataaaa agcacagctt ttaactcggc aaacatttca
     1741 gctcaccatg gcattattcc aactggcgca aaagcaaatt tgaacgaact aagcaaagat
     1801 gaactaaata tttttatgat gatctcaaaa agatttgcct tgcaattttt tacagcaaga
     1861 gaatacgagg caacaagtat catagttgag atcgatggct ataaatttac ggcttctcaa
     1921 aacgtaacaa ccgatttggg ctttactttt tacctgaaac cacaaaatga tgataaaaaa
     1981 gataacaata gcgatgaagt agaaaatact tcaaggctag tcgatttgtt agaaggatca
     2041 acagcagatt gtatcaaaat caaactcgat gcaaaaaaga ccaaaccaaa accattttat
     2101 actatggcaa cacttcttac agaccttaca ggcgtagcaa aatatgcaaa aaatccaaac
     2161 attaagaagc tactgcttga aaaagatcag ggtaaaaaag gcgaaaatgg tggcatagga
     2221 acacctgcca ctagatcaaa tcatattaaa agtctaatag ataatgattt tatcagtgtt
     2281 agcgatgata agaagcaagt cattcacgca acacaaaaag gcaaagacct aattgctgtt
     2341 gcacctgaaa ttctaactag cgttgatatg actgctttat ggtttgaaaa acaaaaaatg
     2401 atcgaaagtc gtgatcttag cttagacgat tttttagcag agatcaacaa gcaaataaaa
     2461 gaagagatag aaaaagtcaa agatagcgat atgggtaatt ttggagcaag accacaagat
     2521 gcaataacct gccctatgtg caacaaaggc tatttaattc gccgtgaaag tcaaaataaa
     2581 aaaggtgtat tttggtgggg ttgtagcaaa tggcgcaatg actgcaaggc atttttttac
     2641 gacaataatg gcaaaccgca acttgaggca aaaccaaaac aagagatacc taatgatgct
     2701 caaatttgtc caaaatgcaa gagcggaaag cttctgccaa aaacgagtca aaaagggttt
     2761 aattattttg cttgtaacgg aaaacttaaa aatggcaact ggtgcaatgc caaatttaag
     2821 acaaatgata gcggcgaact tgaagagatg atttttgata aaaagtgagg atagaaaatg
     2881 ttagattata caaattctaa atatatcaat gaaagcacaa atgctatatt gaatgattta
     2941 aacgataact tgaaagacaa atattcaagc ggtgtaaagc aaaatttaaa agagttatat
     3001 aaaaatgaag ttaagcaaaa aattgaaaaa atgggcgaga gaaatccaca aatagcggat
     3061 tttttaaatg agatgtatgc aaattccaac tataatatgg atgagtttaa tccaaaatac
     3121 ctaaaagaaa atcaagaaaa atacaaagat caaaaaggtg gcatcgtcgc aagtatcatt
     3181 gataagaatg ataaagcgca aagcagctat caacttgaaa gcttttttga aaaatacgac
     3241 caaatttttg acaaaaatac accacacgac aaaataatcg acagggtagc gagtagattt
     3301 ttagaactta atagcgaatt acacaacaaa atagaacaca atacaatcta caacaaagcg
     3361 gagcaaaatt taagcaaaac attatctgac aatataataa ctcgtattaa cattgaggtt
     3421 gatccaaagg agatcaagag cggctatgaa gtagataaat ttaaaaaatt attaaatagt
     3481 ggcaaagaat ttaagggcga tgaaaacaag gcactattcc agaccttaaa gatgatggac
     3541 aaggctttaa tggatgaaaa caataaggac tttaaagtag tttatgaaaa agtaggtcta
     3601 gattttacag atattaacgg caataaaata aaaatcgatg caaaacttgg agagggatat
     3661 tttcaaaaag atctagatca tcttataaga gtgggttgca atgattgtaa tatcggcaat
     3721 gctagtaaaa tagcaaacaa gctttttata aactcaatcg aattaaaaga tccaaatttg
     3781 gagcaaaaca aagaaccaac aaaagaaata gacaaaggac tagagtttaa aagtccagcc
     3841 acgctagaca attttgagaa atgtctaaaa ggtagtatgg aagcaactgc tgcattagcc
     3901 gaaagtatag gagatgaaag tattactgcc tttacccaaa atttaagtcg tgttgctgga
     3961 atttcaggac ttggcaaaca cataagcaat accatagcct cacaaaacga caaaagtcaa
     4021 agcaaagaag ttatgaatag actaggtctt gcctatgaag aaaaggttaa aagcggagct
     4081 attaaacttc caaaagaaaa agtcatagaa cactcaaatc aaaagagttt aggtgctagt
     4141 agatgaaatt tttaaaacaa tttaaaataa taaataatta taaaaaatta tttattatta
     4201 tattattttc gtgttctgcc ttaaatgctg taaatttgcc gaatataaac gaaactaaat
     4261 ttaattggct tttttataaa tttggtaaag agtttgatat tccgccaata cttctttggg
     4321 caattgcaaa gacagagagc aattttgata tcaaagcaaa aaatatcaac acaaatgggt
     4381 caagcgatta tggattaatg caagttaatt caatacacga gccaacttta aaagctaaaa
     4441 atttaagcct tgatgatctt tatagaccag agataaatat tcaaatgggt gcgatggtct
     4501 taaaaggatg cctagataaa cacggctggg actataaagc actgaattgc tacaacggaa
     4561 aagttgataa taacccatat tctcgtaaag tttttataaa tttgagaacc ttgaaacaag
     4621 aaaggagggt aataaaatga acctacatag agatgataca agggcatttt tggaatatat
     4681 tggctttgac gtcgatagcc actataaatt taagatgcgc caagacgagc acaccgcctc
     4741 tgcctcaatc gatcctaaaa atggctatat aaaagatttt ggtagcggat ttagaggaga
     4801 tgtaatagcc ttttacaaag aagtaaaaag ctgcgatgat gtaacagcct ttgcagaagt
     4861 caaagtaata cttgatgatt taaaaattag caatgaaatc aatcgagact accataccgg
     4921 tagcacaaaa cacaatgtaa atagaaaaca agaaaccata gaacaagaga taattagaac
     4981 actgaccaat aaaaatttaa cagcaggtca agtgtttgaa agtctttgca aagagaaaaa
     5041 tattaaggaa ggatcggata aggccgatag tttttatgat cgcatttgtg atactatgtc
     5101 cgatctatcc aaaaaaaata ttttaaatct tgatattcaa tctgatgttt atagcataaa
     5161 tttagaaaaa cagattaaac aagaaccaaa agtagaatat ttagatgaga atattatgca
     5221 aaaatacgag aatgaacgcc gtgaaaattt tactcgctat caagaacttt taactagact
     5281 tttaccagct tgcgataatg caaaacgcaa ggaattagct caaaaatttc aaataggcta
     5341 ttcaaaaagc gaggataggc ttataatgcc aatgcgcgat gaaaatagtg gaataataac
     5401 actttggaaa tacaatccaa atttaaatat taaatataca tttagcaaag atcgaccacg
     5461 cacagctttt aatattctaa acttaaaaga atatacaaaa gatgatcgcc ctatttttat
     5521 agcagaaggt gaaaaggatt gtttaaatat gctatcgcgt ggatacaaag ccataagcct
     5581 tggcagtgca aatgccaaat ttaaaaccag tcaagctcaa attttaaagg attgctatgt
     5641 agtaattgct tatgattacg atgaagctgg gaaaaatggc tcaaaagcct tgaaagaaca
     5701 gctcaatgga atttgtaaaa cagtagaaat tattgactgg gagaaaattt taaagcacaa
     5761 taatctagaa atcaatctaa aaaaaggctt tgattttaca gactttttag agcttagtgc
     5821 aaagcaaaga gaaaggaagc aaggatttga tagatgacaa aaacaaaaaa caataacaac
     5881 aataaagaga aacaaaagaa aaagcaggtt gtaatctacc ttgaagaaga agaattagaa
     5941 tatctagact atatttataa taaaaaatac tttcccactc gcgccgcata tattagaatg
     6001 ctgataaacg aagataaaga gataataacc aaacctatcc aaaacaagag ctttttaata
     6061 gactgcaaaa agatctcgaa atttgcaacg ccgaaaacga caagatgacg gtcgatagac
     6121 aatataaaag tgagtggaga agcggtgcgc ttgaagaata caaaaactgg gataaagccc
     6181 aaaaggcaaa aatgcttgag aagctaaaag agcaaaacca aaacatacaa attccagtgg
     6241 cacaatccgc cataaaacca gctcaagcca cgatagccca aagagaagaa aaatcaaccg
     6301 acaaaggtcg aggcttttaa tttgatacat tttagaatta tattaaacaa tttaatataa
     6361 ttctaaatta tttaatatct acaaaaaata accgagaaat ttataagaga acccagcagg
     6421 agaaataatt atttataata ttaaattata ttttattatt taatattatt ttaaactttt
     6481 ttatattata attctttcaa acttcaagat aaaggagaaa agatgttgcc aaacacgccg
     6541 caggactatc ctactggctt tgcagtgcct atatggtatg cacaccttat agagcaagtt
     6601 ggcgaagacg ccattgaaaa acttggcttt tacccaaatg aaaggctgct tgagagtgca
     6661 aaaaacctag tagccaaaca ggatcaaaca ctagctaact tttttagcca aaagattttt
     6721 tggggtattt tctacaaaaa tcacggcagc gaggaagaag ccttagcagt aaataaccgt
     6781 aggattattc cgctcgtatg gcttagacag atcgccgata gcaaatttgc gagctcgctt
     6841 aaagagatcg caaagattgc caaaaatgat ctggaacagc tcatttacga agccattttg
     6901 tatcaagagt tttttgagtt acaaatttta ataaaagacg aaagcatagc gtggcttaaa
     6961 aacaatgcta caaaaggtga aattttaaga catcacggct ttaatgaaat gcttggatac
     7021 aagtattttc taaaacgagt tagagaaggt cttatgtttt cggataagac ttatgaaaat
     7081 ggttttgatg agcgaaagct gccaaaattt agccaaatgg tagcagatgg agatggtgca
     7141 tttttacctt gctcactgct taaaaatgag ctgcattttg gtggcggaaa ctggcaaata
     7201 gaatatgagt ttgttgccga tggcgactat taatctatat tatattaaat tttaaaataa
     7261 tttaatataa taaaatataa tttaatataa aggataaaag atgaaaaatt taagcaaagt
     7321 tgtacttggc gcgttggtgg cagtgatatt tattggttgt ggcgaagaag ctaaatttgg
     7381 agataaagaa tatactcacg actacttaaa cgataaagta aatgcgaaaa cattagttga
     7441 actggtagag ttttgtgaag caaataaaaa tgcaaattta agcacaattc aaatgaaaaa
     7501 ctgcgagttg ggaagtttta tcaagcacaa aaaaaatcaa agatggagtt tgcttactgg
     7561 cgataatgaa ccaactgagt gggaaaaatt agttcagcaa tacggaagta aaaaataaaa
     7621 gccaaatttc aaaggataaa caatggtaat cgcaatctgc aatgaaaaag gcggtagcgg
     7681 caaaacaaat atcgccataa atttagccat aaagctggca ctcgtcggcg atgatacgct
     7741 tttagtagat gccgatccac aaagaagtat cgatgtattt acggacatta gagcagatag
     7801 ctcgctgccg ctgctattta atagtgtctc aaagctgggc tcgtcaatgc taaaagagat
     7861 ccaaagctta aagcaaaaat atgatagtgt cgtgatcgac actggcggac gtgatagcca
     7921 agaaatgcgc caagccttag cagtttgcga tattgccatt atcccagtta tcccaagcga
     7981 tcttgatatt gcggtattaa ataagatgat tttagttttc aaccaagcta aaatttataa
     8041 tccaaccgca aaagctctta ttgttatctc aaaagcttcg ccaaatccgt ttttagctaa
     8101 aaaggtcgaa gcgttgcgtg agtatattag tgagaaaaat ttagatgaca tttttctggc
     8161 acacagcatt atttacgagc gcgaggctta ccgcaatgcc ctttcatctg gaatgggcgt
     8221 ggtagaatac tgcaaaaacg gcgaaaatgc aaagcttgat tttgaaggct tttttgacga
     8281 attagttaaa tttgtaaata attaaaaata ataaaatatt attttttaaa gttttaaata
     8341 atataatatg ataaatttac aagggcgaaa aaatgcttac aaaagatgaa atcttagact
     8401 atttaaaaga gattaagcca aaactgcaag aagacggtat cgtaaaactc ggactttttg
     8461 gaagctttgc aaaagacacc gccgatatcg caagcgacgt tgatataaca atagaaacca
     8521 ctggcgattt tgtaaaaaag cactcatggg gtggaataat ttatttggat aatctaagag
     8581 agcggtttat gcgtaaattt aaaagacaag tcgatctatg cgatacggct tcgatgtcga
     8641 agcaaaaaca acaaaattta ttaacaggag tgatttatgt ctgatgatgt caaacgactt
     8701 ggcgatattt caaagcgaat aaatagcatc aataaaatat gtgaaaaata cggcggaatt
     8761 tatgaggcac ttgaaaattt tgaagaagca cagcctgcga ttatgatgca tttaatcgta
     8821 tgtaacgaaa atatagacaa gttaatgtat agcgatgaaa tcgatataaa atcaattctt
     8881 agtcaaaaag agttgcgagg cataaaggct ataagaaata tcgccgcaca cgattatgaa
     8941 gggcttgatt tctcaattat tcacgatgtt gtaaagtatt acttaccaag cataaaaaca
     9001 aatatagata gatttttggt atctcaaaaa gaaattggtg gcagtagtgg ctcaaatgtc
     9061 cacaaagtat caaatgatac cgcaaaatca aaagaaaagg aaaagtaaaa aatggatggc
     9121 ggtgtaaatt taggcaattt cttaaaaaac aacaacgagc gagactattg gctagatgta
     9181 tgtgttcgta tggctcatca tagcacagca atcgagggca atactttaag tcaggatgag
     9241 actgcttcaa tcttgcttga tggctatata gcaaaagcaa ctagcgagcg tgaattttat
     9301 gaagtaaaaa actatcgcca aattttgcca aaaatgtttt catctttaca agaaaaagcc
     9361 aagatagacg agaagctaat aaaagatttt cataggctaa taatgaataa tttaatagac
     9421 aacaacggca aatttaaaac tatcgaaaat ttagttgtag gcgcaaattt cgaacctaca
     9481 aagccgtatc tagtgccagt agcaattaaa gatatgtgcg ataatctata ttttagactt
     9541 gataatgcca aaaatgacga cgataagcta aaagcaatat tgcaaagcca tatcaaattt
     9601 gaaaaaattc atccttttag tgacggaaac ggcagaaccg gcaggataat tatgatctat
     9661 ggttgtttag agaataattt agcaccaatt ataataccaa aagagcaaaa aaatagatac
     9721 attgcaatac tgcgcaacaa tgacatcgat ggatttatgg cgtttgctaa agaaatagaa
     9781 aaagatgaaa tatcaaggcg taataaattt ttaagccaac gaccaaatga gcaagataat
     9841 agtaaatcag tcttatctag gctcggcaat gcttacgcca aaaagctaga aagcggagcg
     9901 atcaaagcat taaatgatac cgcaaattca aaggaaaagg agagataatg caagaacaat
     9961 atacggaaat caaagatagc aatattatta ataaacaaaa catagatatt gcagtagggc
    10021 ttgggcttgt agatgatctg aagccttctg agtattttta taaggctgtt gaaaaatcgc
    10081 gaacatacaa cgaacttgaa gacaatgtaa agaaatatta tgatggcaaa aagctagata
    10141 aaaaagaggt cggcgaaaaa gagtgcgata tagtttcagt aaatatcgcc aagtatttag
    10201 aaaaaagtgg ctttacgcta tctcctgtta cattgaagac tatacataaa aatttatttt
    10261 gggatgcctt tccacaaggg cttgaaaaat atgttggagt ttttagggat gtaaatattt
    10321 caaaaaaaga agaagtcttg ggtggcgaaa aaagcgtaga gtatggtaat tatgatgagc
    10381 ttggcgatat gctggattat gattttgata gagaaaaacg caaagattac gccaaaatga
    10441 ctaggcaaga acaggcttta aatgtcggca aatttgtaag cggggtatgg caaattcatc
    10501 cgtttcgaga aggcaatact aggacaattg cggtttttac tattaagtat ctgcaaagta
    10561 aaggctttga agcaaacaac gatatcttta aagaaaactc aaaatatttc agggatgctt
    10621 tagtgttagc aaattacgac aatatgaaag aaaatataaa aagtgatttt tcatacctag
    10681 agagtttttt taacaaattt attctaaata aaaatataga gttaaaactg ctaccaaaca
    10741 gcccaaaagg tcacaaaagt gagaaatcag tcctatctag acttggtgca gcctatgaca
    10801 aaaaggtgca aagtggagcg atcaaacaac cacaaataag caaaaaatca aaagaaaagg
    10861 aaagataatg ggaattttgg ataaaaaaaa ggaattcgcg tttgtaaata acgcaagtgt
    10921 tgccgcaagt agcaatgtaa gtgagtttat aaattcaggc gcagcggaca aaaaagaaga
    10981 tagaaaaagc aatgccggtc gacctagaaa agaaggcgaa aagccagtag cggttgcaat
    11041 atatctaatg ccaagcgaaa aagagcgact agaaaacgaa gcaaaagagc agtttataag
    11101 cctgtcaggg tatctaaaac aaaagctttt ggcgtaaaat aggcactatc tttgaaagtc
    11161 gtgctttttt acagctgttt ctttgctatc gttagatcga attttatcag ttttttgtgt
    11221 gttttgcagg gccttagcct tgctaacacc attcttgttt tgtcttttat tgatagtttg
    11281 actttgtaaa gttatattag aggcttgtga tttttcttcg cctaaaattt tatattcgct
    11341 ctttttcttt tcactctcac ttagtggctt taattcaact tctcgcttgc cctcaactga
    11401 gcaatcccat acatttttat acacagtttt ttcataccat tgtttggttt tcttatcata
    11461 aattttcttt acgactgctt cttgatcggt taccgtaaaa cgagcccaat cgccatttgt
    11521 aatattatat tgttccatta gtttttctaa atgcttgccc caaaggatgg tttctttacc
    11581 ttttctagtt tcaaatttaa catagtaaga ctcttccacg tgttcctcta gtgagaaatt
    11641 atattttgcc tttccatatc cagtgatctt gtaatggtgc ggcttgtgtc catcccaagg
    11701 atcagggtat ttatctcttg cgaattcctt ttgtttgcgt gaaaaattag ttgccttata
    11761 gcctaattcg gttagatttt tcgcaaactc attgcgtaga tcatcgagat cgactggagc
    11821 aatcttgatc ctattaccat tgcaatcaac agttttcaaa tccaaatgac aatgcggatt
    11881 gtccgtatca ttatggattg ctaatataaa aagattgttt ggaaattttt ctttaatagt
    11941 tttcatcgcc gcatttttaa tatcatccac tggtatattg ttttcgccct tcatcgaaaa
    12001 aaccatatgt aaaacttcgt ttttttcttt taaattttga tcttcttcta tgtccttttt
    12061 acttgggata ttatatattc catcttgaaa gaaagcagca gtctcgtcta aatttttaga
    12121 acaaaaaata tctccaccac tacttggatc attaataaaa acatccaaca attcatcgcg
    12181 actgatatat tttatatgat tttttaattg attaaaattc ttgtccgagc cagtgatttt
    12241 tatcaaaact tgtgaattgt atccattttt tttagtaagc agttttgtgg tataatctct
    12301 ttgggcttta ttaaattttt gagttataaa gcctttgctt gaaatataat tgttccatat
    12361 tttatcttta aaactttgtg gtgagttaaa atatttacct tgttttcgct cgaactcact
    12421 ccaaactttc ttggctttta gaaaattatc atcgtctaaa tatgacttta atttacggct
    12481 catcttagct taactcgtaa aaacttcttt tgttctttta taaatttttc agcctcgagc
    12541 acctgctgtt ttatttgatt taccagctca tcaactgcac ctttgtcaaa ataagtcgct
    12601 ccgtcttgtt gtatagctct aagaaaaatg tttaaattta tgccaactcg cttgattgaa
    12661 taatttactc ttgcaaactc atttatggta tcgttgctta aaattttctc atcatacata
    12721 tgacttaata ccaaaaattt tgaaaattta tttacgcttg aaaatccatt ttctttaccg
    12781 agttttttta aaatttcaaa ctcatcatcg gtaaaaaagt ttttaacttc tttggtgttt
    12841 tctttatata gatttgtatt tttaatctgc aaaagaggat aattttcttt aatggtatca
    12901 gcaaaatttt tatctcgctg tagaaaaaac aaaagtaaat tgactgtttc attgagtgat
    12961 tttacttgca ttttttcttt tagactttgc aaatactcta aattttcgcc atcaattctg
    13021 aaagccttta actcttttgc catattaaag caccctttca ttttttaatt ttccataaaa
    13081 actttgctac tgcaaagccc acaagagcct cgcagagtat ttgccttttt cgaatatttt
    13141 gtataacaaa ataggagaaa aaggctatcc tgcaatctaa ctttttacag tgaattatat
    13201 cacaactttt gttgaaaaaa tatcaaaatt atgctaaaat atcaaaaaat atcaagcagt
    13261 aaatatatac aacaaataaa gaaaaaatag atattatttc
//
LOCUS       DAPPKW010000050        13198 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.050, whole genome shotgun sequence.
ACCESSION   DAPPKW010000050 DAPPKW010000000
VERSION     DAPPKW010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13198
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.050"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            83..349
                     /gene="rpsT"
                     /locus_tag="RPW04_001251"
     CDS             83..349
                     /gene="rpsT"
                     /locus_tag="RPW04_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDX6295342.1"
                     /translation="MANHKSAEKRARQTIKRTERNRFYRTRLKNLTKAVRVAVASGDK
                     DAALVALKDANKNFHSFVSKGFLKKETASRKVSRLAKLVSTLAA"
     gene            361..1428
                     /gene="prfA"
                     /locus_tag="RPW04_001252"
     CDS             361..1428
                     /gene="prfA"
                     /locus_tag="RPW04_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDX6295343.1"
                     /translation="MLADKLRPFIDRYNELNSILSDPEVINDISRMTKLSKEQRNLES
                     IKDATQRYLSILNGIEENKTLLEDPELGELAKDELKALETELPKLEEEIKLLLLPKDP
                     NDEKNIFLELRAGTGGDEAALFVGDLATAYIRYTEERGYKYEIVSSSEGSAGGYKELI
                     LLIKGEGAYSRLKYEGGTHRVQRVPETESQGRVHTSAITVAIMPEVEDSEIDINPNDL
                     KIDVMRSSGHGGQSVNTTDSAVRVTHIPTGLVVVNQDGKSQHKNKDAAIKVLKARLYD
                     MQERERREKESKERKDQVGTGDRSGRIRTYNYPQNRISDHRINLTLYRLDAIMAAGLF
                     DEIIDPLIAHYQAEAIANAGL"
     gene            1454..1804
                     /locus_tag="RPW04_001253"
     CDS             1454..1804
                     /locus_tag="RPW04_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HDX6295344.1"
                     /translation="MTRETVFKYAKEKYGTIPDHPWKKYPKYAILRHLKNQKWYGAVI
                     NIPRNKLGLNGDDAVDVLNVKCEKDLAILLKDNKAIFSAYHMNKKNWISILLEKAENK
                     MVFDLISQSYKITL"
     gene            complement(1805..2308)
                     /locus_tag="RPW04_001254"
     CDS             complement(1805..2308)
                     /locus_tag="RPW04_001254"
                     /inference="COORDINATES: protein motif:HMM:NF013053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HDX6295345.1"
                     /translation="MDSIVTVIDMQTKLLNVMSDKNLLQNSVKFLKIANDLGLKVIAT
                     QQYKKGLGDTDEQILNLINSKIFDKSEFSAFNVIKDEISGYRNVILIGVEAHICVYQS
                     AKDLLNNGYNVTLVDECVGSRDERNKELTFLNLNGVTVKSTEMIAFEMMRSAEHVKFK
                     DISKLIK"
     gene            complement(2326..3084)
                     /gene="xth"
                     /locus_tag="RPW04_001255"
     CDS             complement(2326..3084)
                     /gene="xth"
                     /locus_tag="RPW04_001255"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009295089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HDX6295346.1"
                     /translation="MKLISWNVNGLRAALGKESFSWLDEHKPDFLALQEIKVSEDKIP
                     AEIYNLGFENISANSAKRPGYSGVMSLSNLKSQNLKSQFFDDDEGRVLEHKFDNIHLF
                     NIYFPNGQSGDERLAYKMDFYDKFLSYINALVSEGKGVIFCGDVNTAHRKIDLKNPKA
                     NSKTSGFLPIERAWIDRVIDSGFIDTFRFINGDKENAYSWWSYRFNARAKNVGWRIDY
                     FFISSNLKDKLKDAFILDSIEGSDHCPVGIEIDL"
     gene            3207..4736
                     /locus_tag="RPW04_001256"
     CDS             3207..4736
                     /locus_tag="RPW04_001256"
                     /inference="COORDINATES: protein motif:HMM:NF028537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine--lipid A transferase"
                     /protein_id="HDX6295347.1"
                     /translation="MKISSNIFILSFALFITLLNYKFFEFAINKAGFYENKIVILTLP
                     VLFFALLIIAFSLLFLPYLTKPLSIFIGISGIAGAYFMNTYGTIIDSDMIRNAVQTDV
                     KEVKDLLNWDIILWILGAVFVVIIVVKTKIIYSKVLHEIKIRSIFIVAALAIFGASFG
                     IFSKNFIPFFRNYPEIRFFTTPFYPIYSIIKFTKSLTPKAEFQKIGLDATLKDDKKRL
                     FVLVVGETARAANYSLNNYMKNDTNPYSKENGVLSFTNFYSCGTSTAISVPCMFSNLT
                     KKTFSPSKANNTGNLLDVFTVANIDVSWFGNNSGWCKGVCDRLQNAKNYGGEGFDEVM
                     LKDINSKIQNASKNSFIVVHLQGSHGPTYFKRYPKEFDKFNPTCDTAVLKDCTHDEIV
                     NTYDNTILYTDYVMNKIINMLKDSKFETGLLYVSDHGESLGENGLYLHGMPYAFAPDF
                     QIHVPAILWLNDNKKLDELSRLKDENLSQDYVFHSMLGFFSIDSNVYDNNLDLFAKDI
                     K"
     gene            4733..5095
                     /locus_tag="RPW04_001257"
     CDS             4733..5095
                     /locus_tag="RPW04_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDX6295348.1"
                     /translation="MRNQPKYSFFKNSSYAFSGLFDIISSEKSFKIELAIIIPLLIVS
                     VFLNLTLSEHLLLAAVLFLILVVECINSSIERAVDLTTTNYHILAKKAKDAASAAVFL
                     SICLAGLVWISIILNLIF"
     gene            5062..5325
                     /locus_tag="RPW04_001258"
     CDS             5062..5325
                     /locus_tag="RPW04_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009295091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HDX6295349.1"
                     /translation="MDKYNFKFNILTKLFKKILGEKKTLIMELLVENMDEKYLVKYTI
                     KEICDELEVSKPTVIQTFKLLEEKGVLTKIKNGLYRLNLSDEL"
     gene            complement(5303..5847)
                     /locus_tag="RPW04_001259"
                     /pseudo
     CDS             complement(5303..5847)
                     /locus_tag="RPW04_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018137343.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump"
     gene            5935..6843
                     /locus_tag="RPW04_001260"
     CDS             5935..6843
                     /locus_tag="RPW04_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDX6295350.1"
                     /translation="MKKSVIAEILLIFVAISWGMTFVPVAEAIKSVNVFSFLFWRFLI
                     ATIFMFVFCIKICKFDKKSIYYGLFLGFWLFCGFAFQTYALKYSYSSTVAFITGLSVV
                     LVPFLMLVFFKQSVNKFAFGGALIAFIGLYFLSGTGEFGLGKGEILSIICAVCYALHI
                     SFTGVLVSKCNIYAMVICEFFAVTILSFFGAILFESGDTNSLFQGLQISFETEFLMAL
                     IVCALFATVFAFFVQSYAQIYTTATKTALIFTLEPVSAGLAGYYIANEILSVTQVLGA
                     TAILFGVLFSEIGSNLIKQATLKFEN"
     gene            complement(6840..7667)
                     /locus_tag="RPW04_001261"
     CDS             complement(6840..7667)
                     /locus_tag="RPW04_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002949471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDX6295351.1"
                     /translation="MIDAFSFSFMQNALFAGILVSVACGIMGSLIVVNKMTFIAGGVA
                     HGAYGGIGIAFFLGLSPLLGATFFAIALGLLIAFISLKNRDRTDSIIGAIWAFGMAIG
                     IIFIDITPGYNSDLMSYLFGSILAVSSSDLWFMAFIDLLFIAFSIGLYRQICAVSFDS
                     EFAKLRGVDTTLLYYAMTALMSLCVVATIRVVGLILVIALLTIPPYIAEKFSPNLGIM
                     MILAGVISALFTIFGLWLSYSYNLTSGASIILVATICFFGVEVFCTFKSKLKNKTQI"
     gene            complement(7664..8419)
                     /locus_tag="RPW04_001262"
     CDS             complement(7664..8419)
                     /locus_tag="RPW04_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018713562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6295352.1"
                     /translation="MTVELKNVTFGYDGSTILKNINLVYHSSDFLSIIGPNGGGKSSL
                     LRLMLGLIAPLKGSVLIDGKSPKELCKFIGYVPQHIPINRAFPMSVLEIVLMGRLDNK
                     IFGFYSKKDKELAMNALKKVSMQDFYKRGIGELSGGERQRVYIARALCSDAKILMLDE
                     PTASIDTEGQAEIYTRLKDINATGIGIVIVSHDINMAISFASKVAYVSRELFLHSIDG
                     RDKQSFIEHLSRSHDHFCDVEIALKKCGCKEHV"
     gene            complement(8416..9957)
                     /locus_tag="RPW04_001263"
     CDS             complement(8416..9957)
                     /locus_tag="RPW04_001263"
                     /inference="COORDINATES: protein
                     motif:HMM:NF015763.1,HMM:NF017985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1007 family protein"
                     /protein_id="HDX6295353.1"
                     /translation="MKVVFLTLILLLQSAFGCALCSLYSPTAHTEISFIEDDDKIKDA
                     KVKWIFSENFTELTFKTYDINSNLKLEEDELSEIQKALLDYLEPKDYLMDFSYYDGEE
                     KSKKLNLKANEVKTAIEDGRLVFTFLFPLNLDLKDGRVIRISIFDTQEYFNFKIADSS
                     AYETKSGLFINPNINLNIAFYEIDKEKKTNPDKPSLASIIPKNTNLSNADESPKYDST
                     QNATLDSLKDIDRIDEEKYNLLAKVSTNYLDNLKMLIKDSSGSGVFAILLVSFVYGFL
                     HAAGPGHGKLLTTSYFVANRASYMKAINLSLKIGFLHVIGALILVYVMMFVINAFITK
                     ATNEAASITTKISAVIIILIAIFMIFTKLKIFFKSKKIKFKTISDQSKIYTKIFNYSN
                     SNHEHNGTCGCVCASFSSGFPRSVYEWMLVFAAALVPCPGTVLVFVLAFSLGSFGIGL
                     ASAFMIGLGMASVIFIAAVFGKSMNDSLFKFKNLRVYLEFLALALMIVLGVYMFIISS
                     RVSVL"
     gene            complement(9954..11363)
                     /locus_tag="RPW04_001264"
     CDS             complement(9954..11363)
                     /locus_tag="RPW04_001264"
                     /inference="COORDINATES: protein motif:HMM:NF013465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ZinT/AdcA family metal-binding protein"
                     /protein_id="HDX6295354.1"
                     /translation="MNKFLCVLCIGAAFIYAKPVVTTSILPTKYFVEQIAGDSVDVNY
                     MVNAGADPHIYEPRPEQMKNLEKSDIFFAVGMEYENTWLPRFAKSYPSLDIIKTQKGV
                     PLITSEAHEHGDHDHEKHDHAKQHKDSYYGIFDDNDVKDRDISDWNGDFNSVYPYLID
                     GSLDPVLEAKASSPNSDKNFNEYKKQYEKGYKSSINRIVINNGNISFYTSNGVNTGKY
                     AYKGYEILTYKSGKKGVRYQLENIDKNSNAPKFIQFSDHEIGPAKISHFHIYMGDDSF
                     KTLSLELENWPTFYKSNMKKADIIEDMLEHIDRNFDTHIWVDPLLVKIQAKNIADALI
                     AHYPKNKALYEANLAKFQNELDMLDSYIKEQLASVKNRNFIVYHPSWAYFAKRYGLNQ
                     IAIEAEGKEPKPAQLANIIKEAKEENVKVIFVAPQFSKKAAQLIAKEAGANVVEIDNL
                     AEDWVESMKNTANAFKEGL"
     gene            11549..11899
                     /locus_tag="RPW04_001265"
     CDS             11549..11899
                     /locus_tag="RPW04_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HDX6295355.1"
                     /translation="MKATTFLQSHNISSTPLRIELVKMLQNANKPISYDEFLSKIKAN
                     KTTIYRNLDLLLSKNLIIKNEIEHKSFYELADHAKAYFVCETCHEMEEIEVPNLPGKN
                     IKSAVIKGICEKCS"
     gene            12065..12919
                     /locus_tag="RPW04_001266"
     CDS             12065..12919
                     /locus_tag="RPW04_001266"
                     /inference="COORDINATES: protein motif:HMM:NF015131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1924 domain-containing protein"
                     /protein_id="HDX6295356.1"
                     /translation="MIKLILILGIITSLFGQIRDEIFMPLTQQKAYNKQKADLGKELF
                     RDKRLSKDKTISCETCHNLEITATGTSNQKLLNPPTLLNSSLNFIFSSKGDIKNLSEQ
                     IKKSLTSDKELNSQEEFIVSQINKNPKYEAKFKNLYKDGVTFENSVDALTEFIKALTT
                     PLSRFDKFLAGDKTALSDDEQKGLDIFIRSGCVSCHNGINLGGNIISIMKNEMINTNE
                     ILKVPTLRNISLTKPYFHDGRVNKLRDAIEMIRSRIHSRKHNEEECELIYKFLLTLEG
                     NTPEILYE"
     gene            12912..>13198
                     /locus_tag="RPW04_001267"
     CDS             12912..>13198
                     /locus_tag="RPW04_001267"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295357.1"
                     /translation="MNKRYITNKIIVVMVLVLSLFCAYFIFHTSEIISKNNFWLDKAS
                     EIKILNNDIDIQMSKQLSMINYDDMNAKITEINRLIHEIEMSKDFSKFFFK"
BASE COUNT         4610 a         2331 c         2049 g         4208 t
ORIGIN      
        1 gattaaattt gacttaaatt cagatttatt taattatctt taggatataa tcaccgacta
       61 aaattataaa aaaaggtaag ttatggcaaa ccacaaatct gctgaaaaaa gagcaagaca
      121 aactataaaa agaaccgaga gaaatagatt ttaccgtaca agacttaaga atttaaccaa
      181 agcggtaaga gttgcagtag caagcggcga caaagacgct gcattagtag ctttaaaaga
      241 tgcaaataaa aacttccata gctttgtaag caaaggattc cttaaaaaag agaccgcttc
      301 tagaaaagtt agccgcttag caaaacttgt tagtacttta gctgcataat ttaaatttaa
      361 atgttagctg acaaactacg tccatttata gatcgctaca atgagttaaa ctctattctt
      421 agcgatccag aagtcataaa cgatatatct cgtatgacta aactctcaaa agagcaaaga
      481 aacttagaat ccataaaaga cgctactcaa agatacttaa gtatcttaaa cggtatagaa
      541 gaaaataaaa ctctacttga agatccagaa ctaggcgaac tagctaaaga tgagctaaaa
      601 gcgctagaaa cagagcttcc gaaactagaa gaagagataa aacttctgct tcttccaaaa
      661 gatccaaacg atgaaaaaaa tatcttttta gagctacgcg ccggtacagg aggcgatgaa
      721 gctgccttat ttgtaggaga cttagctact gcgtatataa gatataccga agagcggggc
      781 tataaatacg agatagtaag ttcaagcgaa ggaagtgcag gcggatataa agagctgatt
      841 ttactcataa aaggcgaagg tgcttactca agacttaagt atgaaggcgg aactcacaga
      901 gttcaaaggg taccagaaac agaaagtcaa ggtagagtgc acacttcggc tatcacagta
      961 gccatcatgc cagaagtaga agatagcgag atagatataa atccaaacga tcttaaaata
     1021 gacgttatga gaagctcggg tcatggcgga cagtcggtaa ataccacaga cagtgccgtg
     1081 cgcgtaactc acataccaac aggcttagtc gtagtcaatc aagacggtaa aagccaacac
     1141 aaaaacaaag acgccgctat aaaggtctta aaagctaggc tttacgatat gcaagagcgc
     1201 gaacgcagag aaaaagaaag caaagagaga aaagatcaag tcggcaccgg agatagaagc
     1261 ggtcgtatcc gcacgtacaa ttacccacaa aaccgcatca gcgatcaccg cataaatctc
     1321 actctttata ggctagatgc gattatggca gcaggacttt ttgatgagat catagacccg
     1381 ctcatcgcgc actaccaagc agaagccata gcaaacgccg gactataaat taactatttt
     1441 taaaataaat attatgacca gagagaccgt atttaagtat gcaaaagaaa agtacggtac
     1501 gatccccgat catccatgga aaaaatatcc gaaatacgcc attttaagac atttaaaaaa
     1561 tcaaaaatgg tacggagccg taatcaacat accaagaaac aaactcggac taaatggaga
     1621 tgacgcggtt gatgttttga atgtcaaatg cgagaaagat ttggctattt tgctaaaaga
     1681 taacaaagcc atcttttccg cttatcacat gaacaaaaag aactggatat cgattttgct
     1741 tgaaaaggcg gaaaataaga tggtttttga tctcatttcg caaagttata aaataactct
     1801 ttaactattt tatcaacttt gagatatctt taaatttgac atgctcggca cttcgcatca
     1861 tctcaaacgc tatcatttcg gtagatttta cggtaacgcc atttaaattt aaaaaagtaa
     1921 gctctttgtt tctttcgtct ctactgccca cacactcgtc taccaaagtc acattataac
     1981 cattatttag cagatctttt gcgctttgat atacgcatat atgagcttct actccgatca
     2041 aaatcacatt tctataacct gaaatttcat cttttataac gttaaaagcc gagaattccg
     2101 acttatcaaa tattttggaa tttatcaaat ttaatatctg ctcatcggta tcgccaagcc
     2161 cttttttata ctgctgcgta gcgatcacct taagtcctag atcatttgct atttttagaa
     2221 atttaacact gttttgcaac aaatttttat cgctcatcac gtttaaaagc ttagtttgca
     2281 tatcgataac cgtgactata ctatccatga ttttcctccg tttttttata gatctatctc
     2341 gatacccact ggacagtgat cgctaccttc tatgctatca agtataaagg cgtcttttaa
     2401 tttatctttt aaatttgagc taatgaaaaa ataatcaatc cgccaaccga cgtttttagc
     2461 tcttgcgtta aatctatagc tccaccatga gtaagcgttc tctttgtcgc catttataaa
     2521 tctaaaagta tctataaatc cgctatcgat aaccctatct atccacgccc tttcaatagg
     2581 caaaaatccg cttgttttgg agttggcttt tggattttta aggtcgattt tacggtgagc
     2641 ggtatttacg tcgccgcaaa atatcactcc tttgccttcg ctcaccaaag cattgatata
     2701 agatagaaat ttgtcataaa aatccatctt atatgctagt ctttcatctc cgctttgacc
     2761 gtttggaaag tatatattga aaagatgtat attatcaaat ttatgttcca aaactctgcc
     2821 ttcatcatca tcaaaaaact gcgattttaa attttgagat tttaaattcg acaaactcat
     2881 cacacctgag tagccaggtc ttttggctga atttgcggat atattttcaa atcccagatt
     2941 ataaatttct gctggtatct tatcttcact tactttgatc tcttgcaaag ctaaaaagtc
     3001 cggtttatgc tcatctagcc acgaaaaaga ctcttttcca agcgctgctc taagtccatt
     3061 tacgttccac gaaattagtt tcaaatttaa tccttttata tattttcttg cttaaattat
     3121 aacttcaaat ttaaaatact tatactaaat ttttatctat ttaccatatt gaattataat
     3181 tttaacaaat aattttaagg atcttcatga aaatcagctc aaatattttt atattgagtt
     3241 ttgctctttt tataaccttg cttaactaca aattttttga atttgcaatc aataaagcag
     3301 gtttttacga aaacaaaatt gttattttaa cgcttccggt gctatttttt gcactattga
     3361 taatagcttt tagcttgtta ttcctacctt atctaactaa accattatca atttttatag
     3421 gtattagcgg aattgccgga gcgtacttta tgaacacgta cggcacaata atagatagcg
     3481 atatgataag aaatgcggtg caaacggatg taaaagaggt gaaagatcta ctaaattggg
     3541 atataatttt atggatttta ggcgccgttt tcgtcgtgat tatcgtagta aaaacgaaaa
     3601 ttatctattc taaggttttg cacgagataa aaatcagatc tatttttata gtagcggctt
     3661 tagccatttt cggagcttct tttggtatat ttagcaaaaa ctttatacca ttttttagaa
     3721 actatccgga aatcaggttt tttacaactc cgttttatcc gatatactct ataattaaat
     3781 ttacaaaatc actaactcct aaagcagaat ttcaaaaaat aggacttgac gcaactctaa
     3841 aagatgataa aaaaagatta tttgtacttg tagtaggaga aactgcgaga gctgctaatt
     3901 actcgttaaa taactatatg aaaaacgata ccaacccata ctcgaaagaa aacggcgtac
     3961 ttagcttcac gaacttctac tcatgcggaa catctactgc tataagcgta ccttgtatgt
     4021 tttcaaattt aacaaaaaaa acattttctc caagcaaagc taacaatacg ggtaatttat
     4081 tagacgtatt tactgtagca aatattgatg taagctggtt tggtaacaat tctggatggt
     4141 gcaaaggagt ctgcgataga ctgcaaaacg ctaaaaatta cggcggagag ggctttgatg
     4201 aagtcatgct aaaagatata aattccaaaa tacaaaacgc ttcaaaaaac agctttatag
     4261 tagttcatct gcaaggaagc catgggccaa cttactttaa aagatatcca aaagagtttg
     4321 ataagttcaa ccctacttgc gatactgccg tactaaaaga ctgtacgcat gatgaaatag
     4381 taaatacata tgataatact atactatata ccgattatgt tatgaataaa ataataaata
     4441 tgctaaaaga ttctaaattt gagaccgggc tcctttacgt aagtgatcac ggcgagagtt
     4501 tgggagaaaa cggattatat ttgcacggta tgccttatgc ttttgctccg gattttcaaa
     4561 tacatgttcc tgccatactt tggttaaacg acaataaaaa attagatgaa ttgagcagat
     4621 taaaagatga gaatttatca caagactatg tttttcactc tatgcttgga ttttttagta
     4681 tagattcaaa cgtgtatgat aacaatctgg acttatttgc taaggatata aagtgagaaa
     4741 tcaaccgaaa tatagctttt ttaaaaactc atcatatgcc tttagcggac tttttgatat
     4801 catatctagc gaaaaaagct ttaaaataga actagccatc ataattcctc tacttatcgt
     4861 atctgttttt ttaaatttaa ccctaagcga acatctactt ttagccgccg tgctattttt
     4921 gattcttgta gtagagtgta tcaactcatc tatagaaaga gccgtagacc ttactacgac
     4981 aaactatcat atactagcta aaaaagcaaa agacgctgca agtgcggctg tgtttttaag
     5041 tatatgttta gcgggattag tatggataag tataatttta aatttaatat tctaacaaaa
     5101 ctctttaaaa aaattctagg cgaaaagaaa acgcttataa tggagcttct agtagaaaat
     5161 atggatgaaa aatatcttgt aaaatatact ataaaagaga tttgcgacga gctcgaagta
     5221 agcaaaccca cagttattca gaccttcaag ctcttagagg aaaaaggcgt tttaacaaag
     5281 ataaaaaacg gtttatatag acttaattta tcagatgagt tatgataatt ttacagccta
     5341 tcaaaataag tataacgccg ccaagaacta gagctttgct ttctaacatt tcgcccaaaa
     5401 ctctgcccat gtaactagca ataacgcata aaacaaaaca taccaagcct atcacaaaag
     5461 ccgcgatgct atatttatct cttcaaaact aaaagtaatt cctacggcaa gcgcatccaa
     5521 actagtcgca aaagctccta acataagcat tcttaaactt aaatttaaac tacaatgtac
     5581 gctaatctgt cgactctctt ttatcatttt tatacctaaa aatagcaaaa tagcaaaagc
     5641 tacgtaatga tctatataag atataaaccc aacaaatgcg agacccaaaa aataaccgat
     5701 aaccggcata aaagcttgaa atattccaaa caaaaaagac attttaaaaa tttgcaaagc
     5761 ttttatgttc atacaccttg cgccgtttgc catacttata gccacactgt ccattgctaa
     5821 agcgatagat aaaaaaatca gctccattat tatccttatt ttaaaaagag tgtaattata
     5881 tcttaattta cattatgcta aaattaacgc attttttatt gaaagaagat taagttgaaa
     5941 aagagtgtca tagctgagat cttacttatt tttgtagcga tctcttgggg aatgacgttt
     6001 gtaccggtag ccgaagctat aaaaagcgtt aatgttttta gctttttgtt ttggagattt
     6061 ttaatcgcta ctatttttat gtttgttttt tgcatcaaaa tatgtaaatt tgataaaaaa
     6121 tcaatttatt atggtttatt tttaggattt tggttatttt gcggatttgc ttttcagaca
     6181 tatgcgctca aatactcata tagctcaaca gtagcattta tcacaggatt aagcgtcgtt
     6241 ttagtaccgt ttttgatgct tgtatttttt aagcaaagtg tgaataaatt tgcatttgga
     6301 ggagctctta tagcttttat cggactatat tttcttagcg gcacgggaga atttgggctt
     6361 ggtaaaggcg aaattctatc cattatttgc gctgtttgtt atgctttgca tatctcattt
     6421 acaggagttt tggttagcaa atgtaatatt tatgcgatgg taatttgcga attttttgcc
     6481 gtgacgattt taagcttttt tggagcgata ttgtttgaga gtggtgatac aaattcatta
     6541 tttcaaggac ttcaaattag ttttgaaaca gagtttttaa tggcacttat agtctgcgct
     6601 ctatttgcta ccgtatttgc atttttcgta caaagctacg ctcaaattta tacaactgct
     6661 acaaaaacag ctttgatatt cacgcttgag ccagtaagcg ccggattagc cggttattat
     6721 atcgcaaatg aaattttaag cgtaacgcag gtactaggag ctacggctat actttttgga
     6781 gtgctgttta gcgaaatagg ttcaaattta ataaagcaag cgactcttaa atttgaaaat
     6841 taaatttgag ttttattttt tagcttagac ttaaatgtgc aaaatacctc aacaccaaaa
     6901 aagcagatcg tggcgactaa gataatgcta gcaccgctcg taagattata actataacta
     6961 agccacaaac caaaaatagt gaaaagtgca gatataacgc ctgctaaaat catcataata
     7021 cctaaattcg gactaaactt ttcagcgata taaggaggta tagtaagaag agctataaca
     7081 agtataagtc caactactct tatagtggct accacgcaaa gagacataag agccgtcatt
     7141 gcatagtata aaagcgttgt gtcgactcct ctaagtttag caaactcgct atcaaaactt
     7201 actgcgcaaa tttgcctata aagtcctata ctaaaagcta taaaaagcag atctatgaaa
     7261 gccataaacc ataaatcact gctagaaaca gccaaaatcg atccaaaaag ataactcata
     7321 agatcgctat tatatcctgg agtaatatct ataaaaataa tacctatagc cataccaaac
     7381 gcccatatag cacctattat gctatctgta cgatctctat ttttaaggct tataaaagct
     7441 attaaaagtc caagtgctat ggcaaaaaaa gtagcaccca aaagtggact taagcctaaa
     7501 aaaaatgcta ttcctatacc gccatatgct ccgtgcgcaa ctccgcctgc tataaaagtc
     7561 attttattta caactataag agagcccata atgccacacg ccacgcttac taatattccg
     7621 gcaaaaagag cattttgcat aaaactaaaa ctaaaagcgt ctatcataca tgctccttac
     7681 agccgcactt ttttaaagct atctcaacat cacaaaaatg atcgtgagag cgactcaaat
     7741 gctctataaa actctgcttg tctctaccgt ctatgctatg caaaaacagt tcgcgactaa
     7801 cataagcaac cttactagca aaacttatag ccatatttat atcatgactt actataacta
     7861 tacctatacc agttgcgttt atatctttaa gtctagtata aatttctgct tgaccctctg
     7921 tgtctatact agccgtaggc tcatctagca taagaatttt agcatcgctg caaagtgctc
     7981 ttgctatata aactctttgt ctctctccgc cgcttaattc tcctattcct cttttataaa
     8041 aatcttgcat agaaactttt ttaagtgcat tcatagctaa ttctttatct ttttttgagt
     8101 aaaatccaaa tattttatta tccagtctac ccattaaaac aatttctaaa acactcatag
     8161 gaaatgctct atttataggt atatgctgag gaacataccc tataaattta cagagctctt
     8221 ttgggctttt accgtctatt aatacgctgc cttttaaagg agcgataaga cctaacataa
     8281 gacgcaaaag actgcttttg ccgcctccgt tcggtcctat tatgctaaga aaatcactag
     8341 aatgataaac taaatttatg ttttttaaga tagtagagcc gtcataacca aatgttacgt
     8401 tttttaattc tactgtcata aaacactaac tctacttgaa ataataaaca tataaacacc
     8461 aagaactatc attaaagcaa gagctaaaaa ctcaagataa actctaagat ttttaaattt
     8521 aaataacgaa tcattcatac ttttaccaaa taccgccgct ataaatatca cactagccat
     8581 accaagacct atcataaaag cacttgccaa tcctatacca aaactaccta aactaaatgc
     8641 caaaacaaaa acaagcactg ttcctgggca aggtacaaga gctgcggcaa aaacaagcat
     8701 ccactcataa accgagcgag gaaatcctga agaaaaagag gcgcaaacac agccgcaagt
     8761 accgttatgt tcatgattcg aatttgaata gttaaaaatt ttggtatata ttttggattg
     8821 atcgctaatt gttttaaatt taattttttt tgatttgaaa aatatcttta atttagtaaa
     8881 aatcataaaa atagctatta atataattat gacggccgag atttttgtcg tgatactagc
     8941 agcttcgttt gtagcttttg ttataaaagc atttataaca aacatcataa cataaaccaa
     9001 aatcaacgct ccaataacat gcaaaaagcc gatttttaag gacaagttga tcgccttcat
     9061 ataactagcg cggttagcca caaaatagct agtagtaaga agttttccat gtcccggacc
     9121 agcagcatgt aaaaatccat aaacaaacga aactagcaaa atagcaaaca ctccagaacc
     9181 gctgctatct ttaataagca tctttaaatt atcaagataa tttgtactaa cttttgctaa
     9241 aagattatat ttttcttcat cgattctatc tatatctttt aaagaatcca aagtagcgtt
     9301 ttgcgtagag tcgtattttg gactttcatc cgcatttgag aggttcgtat ttttaggtat
     9361 tatactagct aaactaggct tatcgggatt tgtttttttc tctttatcaa tctcgtaaaa
     9421 tgcaatattt aaatttatat ttggattgat gaaaagtcca ctttttgtct catatgcact
     9481 agaatctgcg attttgaagt taaaatactc ttgcgtatca aatatactta ttcgaattac
     9541 tctaccatct tttaaatcca aatttaaagg aaataaaaat gtaaaaacga gtcttccgtc
     9601 ctcgatagcg gtttttacct catttgcttt taaatttagt tttttgcttt tttcctctcc
     9661 gtcataatac gaaaaatcca ttaaataatc tttaggctcc aaatagtcca aaagagcttt
     9721 ttgaatctct gataattcat cttcttctag ttttaaattt gagtttatat catatgtttt
     9781 aaaagtcaat tcggtaaaat tctcagaaaa tatccatttg acttttgcat cttttatttt
     9841 atcatcatct tcgataaaac ttatctcagt atgagccgta ggtgaataaa gtgagcaaag
     9901 cgcgcatcca aacgcgcttt gcaataataa aattaaagtt aaaaaaacta ctttcataaa
     9961 ccttctttaa atgcatttgc cgtatttttc atactttcta cccaatcctc ggctaaatta
    10021 tctatctcta caacatttgc accggcttct ttagctataa gctgtgctgc ttttttagaa
    10081 aactgcggcg ctacaaagat aacttttacg ttctcttctt tggcttcttt tatgatattt
    10141 gccaactgag ccggttttgg ctcttttcct tcagcctcta tagctatttg atttaagccg
    10201 tagcgcttag caaaatacgc ccacgacgga tggtaaacta tgaaatttct attttttaca
    10261 gaagctagtt gctcttttat ataactatct agcatatcaa gttcattttg aaatttagct
    10321 aaatttgctt catataaagc tttattttta ggataatgag ctattaaagc gtcagctata
    10381 tttttagctt gtattttaac aagaagagga tcaacccaga tatgagtatc aaaattcctg
    10441 tctatatgtt ctaacatatc ttctatgata tctgcttttt tcatatttga tttataaaaa
    10501 gtaggccaat tttcaagttc taaactaaga gttttaaaac tatcatctcc catataaata
    10561 tgaaaatgag agatttttgc aggaccgatc tcatggtcgc taaactgaat aaatttaggt
    10621 gcattactat ttttatctat attttccaac tgatacctga cacctttttt accgctttta
    10681 tatgttagaa tttcataacc tttataagca tattttccag tatttacacc gttagaagta
    10741 taaaaactta tattaccgtt gtttataact atacgattta tactgctttt atagcctttt
    10801 tcatactgtt ttttatactc gttgaaattt ttatcactat ttggagagct tgccttggct
    10861 tctaaaacag ggtcaagact accatcgatc aaatacggat atacactatt aaaatctccg
    10921 ttccagtcgc tgatatctct atcttttaca tcattatcat caaaaattcc gtaataacta
    10981 tctttatgtt gtttagcgtg atcgtgtttt tcatggtcgt gatctccatg ctcatgagcc
    11041 tcgctagtta taagcggaac acctttttga gttttgatta tatctaagct cggatagctt
    11101 ttagcaaatc ttggaagcca cgtattttcg tattccattc caacggcaaa aaatatatcg
    11161 cttttttcta gatttttcat ctgttcggga cgcggctcat aaatatgagg atcggcaccg
    11221 gcatttacca tataatttac gtctacacta tctcctgcta tttgctcaac aaaatacttc
    11281 gtaggtaaaa tgctagtagt tacaactggt tttgcatata taaatgcagc gcctatacat
    11341 aaaacgcaaa gaaatttgtt catctttttc cttttaaatt tgatattttg cagagcatta
    11401 tatcaaaatg caacttagtt gcaacttaac agtaaataat tcaaaaatta tattctaata
    11461 tggctaaaat ttgacttatt ttttattata tattttaaat ttaactgttt ttatgatatg
    11521 attttaacca aaaaaatgag gtggttaaat gaaagcgact acttttttac aaagccataa
    11581 tatatcttca actccgctta gaatagagtt agtaaagatg ttgcaaaacg caaacaaacc
    11641 tataagttat gatgagtttt tgtctaaaat caaagcaaat aaaacaacaa tttatagaaa
    11701 tttagatctt cttttaagca aaaatttgat catcaaaaat gaaatagagc ataaaagttt
    11761 ttatgagtta gcagatcatg ctaaagcata ttttgtatgc gaaacatgcc atgagatgga
    11821 agaaatcgaa gttccaaatt tacctggtaa aaatataaaa agtgccgtta taaagggtat
    11881 ttgcgaaaaa tgcagctagt aagatatttt aaatttccaa cagatagatt tgattttaag
    11941 cctttttttt ataaaatgat acatttaaaa aaggttagca attgcaaaat acgctagtaa
    12001 aaatagctcg ccaaaaacat cagtataatg aaagcattgg cataatgaaa gtattggtat
    12061 tttgatgata aagttaattc tgattttagg aattatcacg agtttgtttg gacagatcag
    12121 agatgagata tttatgcctc ttacgcagca aaaagcatat aacaagcaaa aagcagatct
    12181 aggaaaagag ctttttagag ataaaagact aagcaaagat aaaactatct cttgtgaaac
    12241 ttgtcataat cttgaaatca ccgcaaccgg aacttcaaat caaaaactgt taaatcctcc
    12301 gactctgctg aattcctctt taaattttat attttctagt aaaggagata taaaaaatct
    12361 cagtgaacag ataaaaaaat cattaactag cgataaagaa cttaacagtc aagaggaatt
    12421 tatagtatct caaataaaca aaaatcctaa atatgaagct aaatttaaaa atctctacaa
    12481 agacggcgtg acatttgaaa attcagtaga tgctttaact gagtttatca aagcacttac
    12541 tacgccgctt agtcgttttg ataaattttt agcaggagat aaaaccgcac tcagcgatga
    12601 cgaacaaaaa ggacttgata tatttataag atctggctgc gttagctgtc ataacggaat
    12661 aaatttaggc ggaaatataa taagcattat gaaaaatgaa atgataaata caaacgagat
    12721 attaaaagtg ccaacgctaa gaaacatctc tcttacaaaa ccgtattttc acgatggacg
    12781 cgtaaataag cttagagacg ctatcgaaat gataagatca aggatacact cgagaaaaca
    12841 caacgaggaa gagtgcgaac tgatatataa atttctactt actttagagg gaaacactcc
    12901 ggagatatta tatgaataaa agatatatta cgaataaaat aattgttgtt atggttctgg
    12961 tgttatctct tttttgtgcg tattttatat ttcacactag tgaaattata tcaaaaaata
    13021 acttttggct tgacaaagca tcggagataa aaatattaaa taacgatata gatattcaaa
    13081 tgtctaaaca actatctatg ataaattacg atgatatgaa cgctaaaata acagagataa
    13141 acagacttat tcacgaaata gagatgtcaa aagacttttc taaatttttc tttaagat
//
LOCUS       DAPPKW010000051        13015 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.051, whole genome shotgun sequence.
ACCESSION   DAPPKW010000051 DAPPKW010000000
VERSION     DAPPKW010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 13015)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13015)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13015
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.051"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..540
                     /locus_tag="RPW04_001268"
     CDS             <1..540
                     /locus_tag="RPW04_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295358.1"
                     /translation="NYIKTEISSQEQFLENAIRSERFIKKNKKIIIAIVAVAVAALIA
                     YAVLDQIKSSNITESNQAYAALLSNPNDKEAKQTLMQKNPSLFALYAIKTAYDSNNTE
                     ILDEATNLTIDPLLKQILQNAKGESGDGLLSTYNSLVKGYELLAENKLSEAKIEFSKI
                     PSNSPLEPVAKNLEHYQGK"
     gene            543..1550
                     /locus_tag="RPW04_001269"
     CDS             543..1550
                     /locus_tag="RPW04_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA selenium transferase"
                     /protein_id="HDX6295359.1"
                     /translation="MKNITIIASIFAVLILAGCSTKREYFEPTDIAGKISYNETLSSS
                     INYTTKSGATLKNGDVISKNSIIPGLNLDKKDNFIGEFNGKLIVANLDGNLKIIEGKD
                     VIYTKKFQGTVVSASLKDGYLAALSSENTIYLIDINSDTTMLEYRTGDSFAQDSRTAN
                     PVFLTSLIIYPTLDGKIMIVDKQNARIIRDAVVSSDPFFNNVIFLDVLNDKMFAATAT
                     KLIMISPNGTKYYNGQIKDVIAYQNKIYILLKDGNIEITDLDLQPINKKEFKFAIFSN
                     VIPKGDYLYIFEKTGYLIKTDLNLNNSKIIELNNEIEDKSFAGKDAFYYDNKVLKLDQ
                     I"
     gene            1557..1883
                     /locus_tag="RPW04_001270"
     CDS             1557..1883
                     /locus_tag="RPW04_001270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295360.1"
                     /translation="MDNKISEIFSQNKILLKNLKTLDFGEFSKKRTYKLFIGIDKNSL
                     YTLVFMREAKSKFIKKELDELVNITKLVETKFDTNIKKLILLYRSQICSKVIKNATDW
                     KFYAFM"
     gene            1870..2502
                     /locus_tag="RPW04_001271"
     CDS             1870..2502
                     /locus_tag="RPW04_001271"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HDX6295361.1"
                     /translation="MLLCDIGNTTATFYQNRKIWSYKIDEFRAWQPKETVYYINVNDS
                     LSDKLRNPMFIDIQKQINFNTTYIGLGVDRAAACYSIDTGLVVDAGSAITMDVMSNGF
                     HLGGFIMPGITTTLNSLKTISSRLNQTLNSQIDLECLPQKTNDAISYGVIKPIILLVE
                     QLSNEKPIYFTGGDGEFLSRFFKNSIYDRALVFRGMEKAINENKEIFCLQ"
     gene            2490..3101
                     /locus_tag="RPW04_001272"
     CDS             2490..3101
                     /locus_tag="RPW04_001272"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010400265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDX6295362.1"
                     /translation="MLTVALPKGRIADETLNIFSKIFNDEFKFEDRKLTMIKDNFEFL
                     MVRNQDIPTYVTEGAADIGVVGLDVLEEHNCDVLRLLNLKLGKCKVCIGIKNSDTLDY
                     TKPELKIATKMPNITKNYFASKAVAAKIIKLYGSIELAPIVGLSDAIVDIVETGTTMK
                     QNGLKVADIIMESSAHLIANKNSFITKRDEILSLYHKINSVIN"
     gene            3110..4414
                     /gene="brnQ"
                     /locus_tag="RPW04_001273"
     CDS             3110..4414
                     /gene="brnQ"
                     /locus_tag="RPW04_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HDX6295363.1"
                     /translation="MKKNLLKSDFLIISLMLFSMFFGAGNFIFPPMVGKEAGENLYEA
                     IAFFCLTAVALPVLGIAAVAKSGTLDALVKRVDRLFAPIFTISVYIIIGPLLAIPRAA
                     NMPYEVSLSPSFGDSLLFVYTAVYFIINYIICINKSTMIDTIGKWLAPIMLVLIFALF
                     MASIINPLGELGEASGKYAISPMSSGFLDGYQTMDAMAALVFGIVVIQAMKNIGIKDN
                     KRLANSVISSGILAGVILMSIYIILSYIGASSASRFPEAVNGANVLSLVTHYLFGFYG
                     KFILGSIFLLACLTTTVGLIGSASEYFSSIVPKLSYKFWVFIWSFASFCMANIGLNDI
                     LNYSIPILTTFYPVSIVLILLALINNIINSSKLIYRSCVYLTLIISLAYSLEQIGIKL
                     PVIVNIFKNIPFYDIGLGWVIPGIICFCVSYIIFILRKRGSF"
     gene            4411..5520
                     /locus_tag="RPW04_001274"
     CDS             4411..5520
                     /locus_tag="RPW04_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011992074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDX6295364.1"
                     /translation="MNPYLFSIVSISIFLAINFYCYKKLKQNLLLSKFKNILAAFFVL
                     LFIFELLFFISLKNGELSGILYKISIISVGISFMLFCIILPYDTLLFGVTKFSKGRRR
                     AIKFILDISVLIGFFTYFFKGLFNANFNTYITTREIYLKNLANPLNIVVITDVHIGQF
                     LQKDFLQKTVDRINTLSPDAIFIVGDLVDLNAESLGDFLDPLNELKSRFGTFFVVGNH
                     EYYHGISSLLNKFKNLNLKILENENVSFGGINLAGVYDIQGLKMGIFEPNFDKALSNL
                     DPNLPTILLTHQPKSLNYLKQEVDLVICGHTHAGQIFPFSLLVWLDQKYVYGLYKLSK
                     KMQLLVSSGIGFWGPPVRILSKSEIVYINLKEDKK"
     gene            5517..6308
                     /locus_tag="RPW04_001275"
     CDS             5517..6308
                     /locus_tag="RPW04_001275"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDX6295365.1"
                     /translation="MNYNKFSNYFGLVAHYKFPKTIQNLINSWYIKKFNINMEEFKSA
                     DKYNSLNELFTRTLNKQRKLEDGFISPSDGICLECKKGDKQTAYSIKNYSYSINELLG
                     KSLKKGELESQFEYINIYLSPKDYHHYHSPCYLDIMSLHYIPGKLFSVAKNWLEKVDN
                     LYCKNERVILKAKLNNEKQIWLVFIGAWNVGKMKFDFEPRINTNIEAKAVYYEYSNLN
                     LKKGDHIGNFELGSTIVMISEKNSIEYNVKADDTLKFGKNIGKIL"
     gene            complement(6347..6682)
                     /locus_tag="RPW04_001276"
     CDS             complement(6347..6682)
                     /locus_tag="RPW04_001276"
                     /inference="COORDINATES: protein motif:HMM:NF015861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HDX6295366.1"
                     /translation="MNISSVVVNVIDPGFVSDVISSISDIYGCEVVTQSENKIVVVIE
                     SQTFDDEIKSYKSIEAINGISTVAMIYSYQNLDEDIEKSNNNHIGEIVRKIDESDVDD
                     IVYSGNPTV"
     gene            complement(6679..7578)
                     /locus_tag="RPW04_001277"
     CDS             complement(6679..7578)
                     /locus_tag="RPW04_001277"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295367.1"
                     /translation="MKFFVVLFSFFVVLFADSKLDLDANVVGLKLDQNRLFIGLDSGE
                     LYDYNLEDKSLVKLLELPKISTITQENIGSRISSIDNFKNKIAFIYETDNKLKRVGIF
                     DGELTSFDVEEGMKQLFFIDENLVLLVSLSSEIYYLDLNSKKITLKAKLSYSSWIADS
                     VYLSNKSCLVSVSEGGVVYYFDVKSKKVIKDLPIQKDILYSVGAVGDKFVAGSAENLA
                     YYFDGIKPHIFKTDNKHVFRVGLSDEFGAYYTEDGIEIFSANGKKIKHIDYDKDQINY
                     LLFWNNTLISASYDNTIYFWSIK"
     gene            complement(7575..8045)
                     /locus_tag="RPW04_001278"
     CDS             complement(7575..8045)
                     /locus_tag="RPW04_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HDX6295368.1"
                     /translation="MPDLSKRTIFSKILGQKRSNVIPPPYFGGKFDCNECDGKCTFVC
                     ERELLNLENGVVKFDASNIGCNFCEKCAIECPNEVLNLENGAFINANTVIDVNLCISW
                     NGVICSSCQDVCGFRAIDFFGMLRPVINDKCTNCGECISSCFKSAISMNSKDCL"
     gene            complement(8048..8581)
                     /locus_tag="RPW04_001279"
     CDS             complement(8048..8581)
                     /locus_tag="RPW04_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HDX6295369.1"
                     /translation="MKTIILCLAAGLFISACSLANPADKNKSPVSDTEIGLRNVDLND
                     ENNVANPDIKWLGDAPGTNKTFDRSFENAPPLISHSLDGLVPITIESNSCLSCHVPEV
                     AKDAGTIPVPKSHLVVLRTGKDLNGQVSDERFNCTQCHVPQADVKPLKKNNFKADFRY
                     KDSNESSNLLDILNQGI"
     gene            complement(8578..9363)
                     /gene="napH"
                     /locus_tag="RPW04_001280"
     CDS             complement(8578..9363)
                     /gene="napH"
                     /locus_tag="RPW04_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HDX6295370.1"
                     /translation="MKFTILRRLVQLSIILLFIAGNIFGIKILQGNLSSSLLFDTINL
                     SDPFAVLQVALASFSVSSVAITGAIIVFAFYALIAPRAFCGWVCPVNILTDFGAFLRT
                     KLKIGKNILNISQNLRYYLLALSLIFSLIFGIAAFESLSFVNAFNRSLFYLSYSVISV
                     GVIIIIIETFVGKRLICSHICPLGAFYAITSKFSLIRVKYDLNKCSKCYRCKAVCPEE
                     RVLDLVGVKDGIIGSECISCGKCIEACNDDAINFSILKFGDNK"
     gene            complement(9360..10112)
                     /gene="napG"
                     /locus_tag="RPW04_001281"
     CDS             complement(9360..10112)
                     /gene="napG"
                     /locus_tag="RPW04_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HDX6295371.1"
                     /translation="MQRREAIKQGFSLVGLLAASGFAYCEFAAAEPTLKLRPPAARDE
                     NEFLARCIRCGLCVEACPFDTLKLAQFKDGGIGLGTPFFKPREIPCFMCTDIPCAVKC
                     PTGALDVEAVSSDGKLDINKARMGMAVVDDKACIAYFGLRCDACYRNCPLIDKALKLE
                     YKHNERTGKHALLLPIVDTDVCTGCGKCEQSCITKKASITVVPREILKGEMNDNYVKG
                     WDQSDENRIKDNDTKIKLDGKKSLKYLNGDEL"
     gene            complement(10115..12892)
                     /gene="napA"
                     /locus_tag="RPW04_001282"
     CDS             complement(10115..12892)
                     /gene="napA"
                     /locus_tag="RPW04_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase catalytic subunit NapA"
                     /protein_id="HDX6295372.1"
                     /translation="MDRREFIKSSAAAAACSAAGIAVPSSLSAAENQDGWRWDKSACR
                     FCGTGCGIMVATKNGKIVAVKGDPLAPVNRGLNCIKGYFNAKIMYGEDRITKPLLRVN
                     ANGEFDKKGKFQEVSWKRAFDEMEKQFRKTYAELGPTGIGVFGSGQYTIQEGYAISKL
                     IKGGFRSHNIDPNARHCMASAVVGFMQTFGIDEPAGCYDDIELTDTIVTWGANMAEMH
                     PILWSRVSDRKLQNSDKVKVVNLSTYSTRTSNIADIEIIFTPHTDLAIWNYIAREIVY
                     NHPEAIDEEFVKANCVFTTGPVDIGYGMRANIKHPKYLPSELDTAAKEKSTVLSENEG
                     VTLAYLGMKAGDTLENKSTGAPDKHWIIQYEDFKKALAPYTLDFVAKLAKGDPNEDLE
                     EFKKKLKALADLYIEKNRKVVSFWTMGMNQHTRGVWVNEQSYMVHFLLGKQAKPGSGA
                     FSLTGQPSACGTAREVGTFSHRLPADMVVANPKHREITEKIWKIPAGTINPKPGAPYM
                     KIMRDLEDGKVKFVWVHVNNPWQNSANANHWIKAAREMDNFIVVSDPYPGISAKVGDL
                     ILPTAMIYEKWGAYGNAERRTQHWRQQVLPVGDAMSDTWQYMEFAKRFKLKDFWGEVK
                     VDGKLTLPNVLDKAVAMGYNPENTLFEVLFANKSAMKFSSDDKIMAGYDNTEVFGDSR
                     NVVGSDGNVFKGYGFFVQKYLWEEYREFGLGHGHDLADFDTYHKVRGLRWPVVDGKET
                     LWRFNTKYDVYAKKDNPNGDFSFYGNKNGALVTGDLAKATSKEKEALKSRAKIFFRPY
                     MDPPEMPSKDYPLWLCTGRVLEHWHSGTMTMRVPELYRAVPEALCFMNEIDGNKFGIK
                     QNDIIWVESRRGKVKARVDFRGRNKPAEGLIYVPWFDENVFINKVCLDATDPLSKQTD
                     FKKCAVKIYKA"
BASE COUNT         4499 a         2275 c         1962 g         4279 t
ORIGIN      
        1 aattatataa aaacagagat aagttcgcaa gagcaatttt tagaaaatgc gataagaagc
       61 gaaagattca taaaaaaaaa taaaaaaata attatagcga tagttgcagt agcagtagca
      121 gcgttaatag cttatgcggt tttagatcaa ataaaatcaa gcaacataac agaatcaaac
      181 caagcttatg cggctctttt atcaaatcca aacgataaag aagcaaaaca aaccttaatg
      241 caaaaaaatc catctttatt tgctctttat gctataaaaa cagcttatga ctcaaataac
      301 actgagatat tagatgaagc aacaaatcta actatcgatc cgcttttaaa acaaatttta
      361 caaaatgcaa aaggagagag cggtgatgga cttttatcta cttacaattc gcttgtaaaa
      421 ggatatgagc tgttagcaga aaacaaactg tcagaagcta aaatagagtt ttcaaaaata
      481 ccgtcaaatt cgccattaga gcctgtggct aagaatctag aacactatca aggaaaataa
      541 atatgaaaaa tataactatc atagcttcta tttttgccgt gctgatatta gctggttgta
      601 gtacaaaaag agagtatttt gagcctacag atattgctgg aaaaattagc tataatgaaa
      661 ctttaagctc atctataaat tatacgacaa aaagcggagc tacattaaaa aatggcgatg
      721 taatatcaaa aaatagtatt atacccggtc taaatttaga taaaaaagat aactttatag
      781 gtgaatttaa cggcaaactg atagttgcaa atttagacgg aaatttgaaa ataattgaag
      841 gtaaagacgt tatctataca aaaaaatttc aaggaacagt tgtatctgca tcactaaaag
      901 acggatatct agcagctctt agctctgaaa atactatata tttaatagac ataaacagcg
      961 atactacaat gcttgagtat agaacaggcg actcattcgc ccaagactca agaacagcca
     1021 atcctgtatt tcttactagt cttataatat atccgacgct agatggaaaa attatgatag
     1081 tcgataaaca aaacgcaaga ataataagag acgccgtagt gagcagtgat ccgtttttta
     1141 ataatgtaat atttttagat gttttaaacg acaaaatgtt tgcggcaacg gctacaaaat
     1201 taattatgat aagcccaaac ggaacgaaat actacaacgg tcagataaaa gacgtaatag
     1261 catatcaaaa taaaatatat atattgttaa aagatggaaa tatcgagata acagacttag
     1321 atcttcaacc tataaataaa aaagagttta aatttgcgat attttcaaac gtaatcccaa
     1381 aaggggatta tctttacatt tttgaaaaaa caggatattt gatcaaaacg gatctaaatt
     1441 taaataatag caaaataata gagctaaaca acgaaatcga agataaaagt tttgccggaa
     1501 aagatgcatt ttattacgat aataaagttt taaaactaga tcaaatttaa ataaatatgg
     1561 ataataaaat atctgaaatt tttagccaaa ataaaatttt attaaaaaat ttaaaaacgc
     1621 tggattttgg tgagtttagt aaaaaacgta catataaact atttatagga atcgataaaa
     1681 atagtctata tactcttgtt tttatgcgtg aagccaaaag caaatttata aaaaaagagc
     1741 ttgacgagct agttaatata actaagcttg tggagactaa atttgatacc aacatcaaaa
     1801 aattgatcct actttataga tctcagatct gttctaaagt gataaagaac gccacggatt
     1861 ggaaatttta tgcttttatg tgatatagga aatacaaccg ctactttcta tcaaaataga
     1921 aaaatatgga gctacaaaat agacgagttt agagcttggc agccaaaaga gacggtgtat
     1981 tatataaatg taaatgatag tttatctgat aaattaagaa atcctatgtt tatagatata
     2041 caaaaacaga taaatttcaa cacaacgtat atagggcttg gagtagatag agcagcggct
     2101 tgctatagta tagatacggg actagtagta gacgcgggaa gtgctataac tatggatgta
     2161 atgtcaaacg gatttcatct aggaggattt ataatgcccg gtataactac tactttaaat
     2221 agcttgaaga caatctcttc tagattgaat caaacgctaa actcacaaat agatcttgag
     2281 tgtctaccgc aaaaaacaaa tgacgccatt agctatggag ttataaaacc gataatctta
     2341 ctagtagaac agctttcaaa cgaaaaacct atatatttta cgggcggaga cggagagttt
     2401 ttatcgagat tttttaaaaa ctctatttat gatagggctt tagtttttag aggtatggaa
     2461 aaagccataa atgaaaataa ggagatattt tgcttacagt agctttacca aaaggcagaa
     2521 ttgccgatga aacattaaat atttttagta aaatttttaa tgacgagttt aaatttgaag
     2581 atagaaaatt aactatgata aaagataatt ttgaattttt aatggtaaga aatcaagata
     2641 ttcctacata tgttacagaa ggtgctgcag atataggagt agttgggctt gacgtcttag
     2701 aagagcataa ttgtgatgtt ttgaggcttt taaatttaaa acttggaaaa tgcaaagtct
     2761 gcataggtat aaaaaatagc gatacgctag attacacaaa accagaactt aaaatagcaa
     2821 ctaaaatgcc aaatatcaca aaaaattatt tcgcgagcaa ggcagttgca gcaaaaatca
     2881 taaaactata cggatctata gaattagctc caatagtagg actaagtgac gctatagtag
     2941 atatcgtcga gacaggaaca actatgaagc aaaatggact aaaagtcgcc gatatcatca
     3001 tggaaagctc tgctcatctt attgcaaata aaaatagctt tataacaaaa agagatgaga
     3061 tactatcttt ataccataaa attaactcag ttataaatta agtataaatt tgaaaaagaa
     3121 tctattaaaa agtgattttc ttatcatatc tttgatgctg ttttccatgt tttttggagc
     3181 tggaaacttc atttttccac caatggtagg aaaagaagcc ggagaaaatt tatatgaagc
     3241 tatagcattt ttttgcctca ctgctgttgc tttgccggta cttggtatag cggctgtagc
     3301 aaaaagcggt acgttagatg cactagtaaa acgtgtagat agactatttg cgccaatttt
     3361 tactatatct gtctatataa ttataggtcc acttttagca attcctagag ctgcaaatat
     3421 gccttatgaa gttagtcttt cgccgtcttt tggagatagt ctactttttg tatataccgc
     3481 agtttatttc atcataaatt atataatctg catcaacaaa agcactatga tagatactat
     3541 aggaaaatgg cttgctccta ttatgcttgt gcttatcttt gctcttttta tggctagtat
     3601 tataaatcct ttaggcgaac ttggcgaagc aagtggaaaa tacgcaatca gccctatgtc
     3661 tagtggattt ttagacggat atcaaactat ggatgctatg gcggctcttg tttttggtat
     3721 cgtagttata caagctatga aaaatatcgg tataaaagat aataaacgac ttgcaaactc
     3781 ggttattagc tctggtattt tagctggagt tatattaatg agtatatata taatactatc
     3841 ttatatagga gctagtagcg ctagcagatt tcctgaagcg gtaaacggtg caaacgtact
     3901 atctttagta acacattatc tatttggttt ttatggaaag tttatattag gatctatatt
     3961 tttattagct tgtcttacca ctacagtggg gcttataggc tcagcaagcg aatattttag
     4021 ctctatagtt cctaagctta gttataaatt ttgggtattc atctggagtt ttgctagttt
     4081 ttgtatggca aacataggct taaatgatat attaaattat agcataccta ttttaactac
     4141 attctatccg gtatctatag tattgatact attagctctt ataaataata ttataaactc
     4201 ttcaaagctg atatatcgct cttgtgtata tctaacattg ataataagcc ttgcttactc
     4261 cttagaacaa ataggaatta agctgcctgt catagtaaat atatttaaaa atataccgtt
     4321 ttacgatatc ggtcttggct gggtaatacc cggaatcatc tgtttttgcg tctcatacat
     4381 aatttttata ctacgaaaaa gaggtagttt ttgaacccgt atttatttag tatcgtatct
     4441 atatctatat ttttagctat taatttttac tgctataaaa agcttaaaca aaacttactt
     4501 ttatctaaat ttaaaaatat tttagctgct ttttttgtgt tattatttat ttttgaactg
     4561 ctatttttta taagtttaaa aaatggcgaa ctgagcggta tattatataa aatatcgatt
     4621 atcagcgttg gtataagttt tatgctattt tgtataattt tgccttatga tacgttgctt
     4681 tttggagtaa ctaaatttag caaaggaaga agaagggcta ttaaatttat acttgatatc
     4741 agcgttctta taggtttttt tacatatttt ttcaaaggat tgtttaacgc caactttaat
     4801 acttacataa caactagaga aatttatcta aaaaatcttg caaatccatt aaatatcgta
     4861 gtaattaccg atgttcatat aggtcaattt ttgcaaaaag attttttgca aaaaacagtt
     4921 gatagaataa acacgctctc acccgacgct atttttatag tcggtgattt agtagattta
     4981 aacgctgaga gcttaggaga ctttttagat cctttaaatg aactaaaatc acgattcgga
     5041 acattttttg ttgttggaaa tcatgagtat tatcatggta taagttctct tttaaataaa
     5101 tttaaaaatt taaatttaaa aattttagaa aatgaaaacg taagttttgg aggtataaat
     5161 ttagccggag tttatgatat acaagggctt aaaatgggta tttttgaacc gaattttgat
     5221 aaagcgcttt caaatttaga tccaaattta ccgactattt tactaactca tcaaccaaaa
     5281 tctctgaatt atcttaagca agaagttgat ttagttatct gcggacacac tcacgctggg
     5341 cagatttttc cattttcttt acttgtatgg cttgatcaaa aatacgttta cggactatac
     5401 aaattaagta aaaaaatgca acttttagta agtagcggaa tcggcttttg gggtcctcca
     5461 gtaagaattt taagtaaaag cgaaatagta tatataaatt taaaagagga taaaaaatga
     5521 attacaataa attttcaaat tatttcggac ttgtagctca ctataaattt ccaaaaacta
     5581 ttcaaaattt aataaatagt tggtatataa aaaaatttaa tataaatatg gaagaattta
     5641 aaagtgcaga taaatataac agcttaaatg agctatttac acgtacttta aataaacaaa
     5701 gaaagctaga agatggattt ataagcccta gtgacggaat atgccttgag tgcaaaaaag
     5761 gagataagca aacagcttat agtataaaaa actactctta tagtattaat gagcttcttg
     5821 gtaaaagcct taaaaaaggt gaattagagt cacagtttga gtatataaat atatacttat
     5881 ctcctaagga ttatcaccat tatcattctc cgtgttattt ggatattatg agtttgcact
     5941 atattccagg aaagcttttt agcgtagcaa aaaattggct agaaaaagtt gataatctat
     6001 attgcaaaaa tgagagagtg atactaaaag ctaaattaaa caatgaaaaa cagatttggc
     6061 tagtatttat aggggcttgg aatgtcggta aaatgaaatt tgattttgaa ccgcgaataa
     6121 atacaaatat agaagccaaa gccgtatatt atgaatattc aaatttaaat ttaaaaaaag
     6181 gagatcatat aggaaatttt gaactaggat caactattgt gatgataagt gaaaaaaata
     6241 gtatagaata taacgtaaaa gccgacgata cactaaaatt tggaaaaaat ataggcaaaa
     6301 tactataaaa gtatctcact tataaagaaa aatagcataa gttaaatcaa acggttggat
     6361 ttccgctata aactatatca tcaacatcgc tttcatctat ttttcttact atttctccta
     6421 tatggttatt attcgatttt tctatgtctt cgtctaaatt ttgataacta tatatcatag
     6481 ccacagtaga aatgccattt atagcctcta tgcttttata tgattttatc tcatcatcaa
     6541 atgtttgaga ttctatcact acaactattt tattttcact ttgagtaaca acttcgcaac
     6601 catatatgtc agatatagag cttataacgt cgctcacaaa gccaggatct attacattca
     6661 caacaacact tgagatattc attttatact ccaaaaataa attgtattat cataactagc
     6721 acttattaaa gtattattcc aaaatagcaa ataatttatc tgatctttgt cataatcaat
     6781 atgttttatc ttcttaccgt tagcagaaaa tatctctatg ccgtcttccg tataataagc
     6841 accaaactca tcgctcaaac cgactctaaa aacatgctta ttatccgttt tgaatatatg
     6901 aggtttaata ccgtcaaaat aataagccaa attttcagca gatccagcta caaatttatc
     6961 ccctactgct ccaacgctat ataaaatatc tttttgtata ggcagatctt taatcacttt
     7021 tttacttttt acgtcaaaat aatatacaac tccgccctcg ctaacagaaa caaggcatga
     7081 tttatttgac aaataaacag aatcggcaat ccaagatgag tagctaagtt ttgcttttaa
     7141 agtaatcttt ttagaattta aatcaagata ataaatttca ctactaagac taactaataa
     7201 aaccaaattc tcatctataa aaaatagttg tttcattcct tcttctacat caaacgaagt
     7261 aagttctcca tcaaaaatac caactctttt tagtttatta tccgtctcgt atataaaagc
     7321 aattttattt ttaaaattat ctatactgct aattctagaa ccgatatttt cttgagttat
     7381 ggttgaaatt tttggtaatt ccagtagctt tactaaactt ttatcttcta gattataatc
     7441 atatagttcg ccactatcca atcctataaa aagtctattt tgatctagtt taagtcccac
     7501 gacatttgca tctaaatcca gctttgaatc ggcaaacaaa actacaaaaa agctaaataa
     7561 cactacaaaa aatttcataa acaatccttt gaattcatcg aaatcgcact cttaaaacag
     7621 ctgcttatac attcaccgca gttagtgcat ttgtcgttga taacagggcg taacatacca
     7681 aaaaaatcaa tagccctaaa tccgcaaaca tcttgacaac ttgagcaaat tacaccattc
     7741 caagatatac ataaattcac atcaatcaca gtattggcat taataaacgc accattttct
     7801 aaatttaaaa cctcattcgg acactctata gcacactttt cacagaaatt acagcctata
     7861 tttgaagcat caaattttac gacaccgttt tctaaattta gcaactctcg ttcgcaaaca
     7921 aatgtacatt ttccatcaca ttcattacaa tcaaatttgc cgccaaaata tggcggcggt
     7981 attacattgg atctcttttg acccaaaatt ttactaaata ttgtcctttt agaaaggtct
     8041 ggcattctta gataccttga tttaaaatat ctagtaagtt tgagctttca ttgctatctt
     8101 tatatctaaa gtcggctttg aaattgtttt tcttaagagg tttaacatct gcttgaggta
     8161 cgtgacattg agtacagtta aatctctcat cactaacttg tccgtttaga tcttttccgg
     8221 ttcttaaaac aacaaggtga ctctttggaa ccggtatagt tccagcgtct tttgctactt
     8281 ctggaacgtg acagctaagg caactattgc tctcgatagt aataggaacc aatccatcaa
     8341 gactatgaga aataagcgga ggtgcatttt cgaaacttct atcaaatgtt ttattagttc
     8401 ccggggcatc tcctaaccat tttatatcag gatttgcaac gttattttca tcgtttaaat
     8461 caacgtttct aagacctatt tcagtatcag aaacagggct tttattttta tcggcaggat
     8521 tagccaaact acaagcgctt ataaataatc ctgcagccaa acaaagtata atagttttca
     8581 tttattatct ccaaatttta atatactaaa attaatcgca tcatcattgc aagcttcaat
     8641 acacttgccg cagcttatac actcgctgcc aataatacca tcttttactc caactagatc
     8701 caaaactctc tcttcggggc aaactgcttt acatctgtag catttactgc atttatttaa
     8761 gtcgtattta acacgaatca gactaaattt actggtaatc gcataaaacg ctccaagcgg
     8821 acagatatga gaacaaatga gtcttttgcc tacaaaagtt tcaattataa tgataataac
     8881 gcctacgctg atcacactat aacttagata aaatagactt ctgttaaatg cattaacaaa
     8941 acttaagctt tcaaaagctg ctataccaaa aatcaaacta aatataaggc ttaaagccag
     9001 caaataatat cttaaatttt gacttatatt taagatattt ttacctattt tcaattttgt
     9061 tcttaaaaaa gccccaaaat ccgtaaggat atttacagga caaacccaac cacaaaatgc
     9121 acgcggagca ataagcgcat aaaatgcaaa aacaattatc gctccagtaa ttgctactga
     9181 agatacgcta aaactagcta aagctacttg caatacagca aaaggatcgc ttaaatttat
     9241 agtatcaaac agtaaagaac tgcttaaatt tccctgtaaa atcttaattc caaaaatatt
     9301 accagcaata aaaagcaaga taatgctaag ctgaactaat cgtcttaaaa tagtaaattt
     9361 catagctcat ctccatttag gtattttaga cttttcttgc catctagctt tattttagta
     9421 tcgttatctt tgatcctatt ttcatcactt tgatcccagc cttttacgta attatcgttc
     9481 atttcgcctt ttagaatttc tctaggaaca accgtgatag aagccttctt ggttatacaa
     9541 gactgctcac atttaccaca tccagtacat acatcagtat ctactatagg aagtaataat
     9601 gcgtgttttc ctgttctttc attgtgttta tactcaagtt ttaacgcttt atctataagt
     9661 ggacaatttc tataacaggc gtcacatcta agaccaaaat aagctataca agctttatca
     9721 tctacaactg ccatacccat tctagcttta ttgatatcaa gttttccatc gctactaaca
     9781 gcttctacgt ccaaagctcc agtagggcat ttaactgcac acggaatatc ggtacacata
     9841 aagcaaggaa tttcacgcgg cttaaaaaat ggcgttccta gcccaattcc gccgtcttta
     9901 aactgtgcta atttcagcgt atcaaacgga cacgcctcta cacacaatcc gcaacgaata
     9961 cagcgagcta aaaattcatt ttcatctctt gctgctggtg gacggagttt gagtgttggt
    10021 tcagcagcag caaattcaca ataagcaaat ccgctagccg ccaaaagacc cactaagcta
    10081 aaaccttgtt ttattgcttc ccttctttgc ataattaagc cttataaatc ttaactgcgc
    10141 atttcttaaa gtcagtttgt tttgagagtg gatctgttgc atccaaacag accttattta
    10201 taaatacgtt ttcatcaaac catggaacat atattaaacc ctctgcaggt ttatttctac
    10261 cacggaaatc aaccctagct tttactttac cacggcggct ttcaacccat atgatatcat
    10321 tttgtttaat accaaattta tttccgtcta tttcattcat aaagcataat gcctcaggaa
    10381 cggcacggta aagctcagga acacgcatag tcatagtacc actatgccaa tgctcgagaa
    10441 cacgacccgt acataaccat agcggataat ctttgcttgg catctctggt ggatccatat
    10501 aaggacggaa gaatatctta gctctgctct taagtgcttc tttctctttt gaagtagctt
    10561 tggctagatc tccggttact aaagctccgt ttttatttcc atagaatgaa aaatctccgt
    10621 ttggattatc ttttttagca tatacatcat actttgtatt aaatctccaa agagtctctt
    10681 taccatcaac aactggccat ctaagacctc taactttgtg ataagtatca aaatcggcta
    10741 aatcgtgacc gtgtcctaga ccaaactcac gatactcttc ccaaagatat ttttggacaa
    10801 agaatccata acccttaaat acgtttccgt ctgatccaac aacatttctg ctatcaccaa
    10861 atacttcggt attatcatag ccggccataa ttttatcatc actactaaat ttcatagcac
    10921 ttttgttggc aaataaaact tcaaaaagag tattttcagg attatatccc atcgcaactg
    10981 ctttatctaa aacatttggt aaagtaagtt tgccgtctac tttaacttca ccccaaaaat
    11041 cttttaattt aaaacgtttt gcaaattcca tatattgcca agtatcactc atagcatcac
    11101 ctactggtaa aacttgttgt ctccagtgct gagttcttct ttcagcatta ccataagcgc
    11161 cccatttttc atatatcata gcagtcggaa gtataagatc tccgacttta gctgaaattc
    11221 caggatacgg gtcgcttact actataaagt tatccatctc gcgtgccgct tttatccagt
    11281 ggtttgcgtt tgccgagttt tgccatggat tatttacatg cacccataca aatttaactt
    11341 ttccatcttc aagatctctc atgatcttca tatatggagc acccggtttt ggatttatag
    11401 ttccggctgg aattttccaa attttttcag taatttctct atgttttgga tttgcaacaa
    11461 ccatatctgc tggaagtctg tgtgagaacg taccgacttc tctagctgtt ccacaagcac
    11521 ttggttgtcc tgttaatgag aatgctccgc tacccggttt tgcttgtttg cccaacaaga
    11581 aatgcaccat ataactttgc tcatttaccc aaacacctct tgtatgttgg ttcataccca
    11641 ttgtccaaaa actgacgact ttacgatttt tttctatata aaggtcggct aatgctttta
    11701 attttttctt aaattcttct aaatcttcgt ttggatcacc ttttgcaagc ttagctacaa
    11761 aatccaaagt ataaggagct aaagcctttt taaaatcttc atattgaatt atccagtgct
    11821 tatccggagc gcctgtactt ttattttcta aagtatcacc tgctttcatt cctaaataag
    11881 caagagtaac tccttcattt tcgcttagta ctgttgattt ttcttttgcg gcagtatcaa
    11941 gttcactcgg aaggtatttt gggtgcttta tatttgcacg cataccataa ccgatatcta
    12001 ctggtcctgt tgtaaataca caatttgctt ttacaaactc ttcgtctata gcttctgggt
    12061 gattataaac aatctctctt gctatatagt tccatatagc aaggtcggta tgcggagtaa
    12121 atataatctc tatatcagct atgtttgaag ttctagttga ataagtagat aaatttacta
    12181 cttttacttt atcgctattt tgaagttttc tatcactaac tcttgaccaa agtatcgggt
    12241 gcatttctgc catatttgct ccccaagtta cgatagtatc cgtaagctcg atatcatcat
    12301 aacagccagc aggttcatct ataccaaatg tttgcataaa accaacaacg gcactagcca
    12361 tacaatggcg tgcatttgga tctatattat ggcttctaaa accgccttta attagcttag
    12421 aaatagcgta accttcttgt atagtgtatt gaccgctacc aaaaacacct ataccagtag
    12481 gtccgagctc tgcgtaagtt ttgcggaatt gtttttccat ctcgtcaaaa gctcttttcc
    12541 agctaacttc ttgaaattta ccttttttgt caaattcacc atttgcatta actctaagaa
    12601 gaggttttgt tatacggtct tcaccataca taatttttgc attaaagtaa cctttaatac
    12661 agttaagacc tctattaact ggagctagag gatcaccttt gactgccacg attttaccat
    12721 tttttgtagc caccatgata ccacaaccag taccacagaa cctacaagca gatttatccc
    12781 agcgccaacc atcttgattc tcagcagcgc ttaatgagct tggtactgct atcccagcag
    12841 ccgagcaagc agcagctgca gctgagcttt ttataaattc tcgtctatcc atatcgttac
    12901 acctttcttg ctctaatatt gcaaaatatc gtaaatgtat tatatttaaa atttattggt
    12961 ttataataaa atttccaaca gtttttaaat atatattttt ataattttat ataat
//
LOCUS       DAPPKW010000052        12968 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.052, whole genome shotgun sequence.
ACCESSION   DAPPKW010000052 DAPPKW010000000
VERSION     DAPPKW010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12968)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12968)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12968
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.052"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(88..756)
                     /locus_tag="RPW04_001283"
     CDS             complement(88..756)
                     /locus_tag="RPW04_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDX6295373.1"
                     /translation="MNQNISANIIVIDDEIDLCELLEYNLNRAGFNVTTFLDTKRVEQ
                     FLDEEDTDLLIVDRNLNGIEGSKFVASLRAKGYNEPVIFLTAKSSNKDKLDGFDSGGD
                     DYITKPFEINELIARINALLKRSNKTASIYKFKNIILNLKTNEVKVDGKTKELTKLEF
                     CLLYEFMKNRNILLTRDYFLEEIWKENANDKTINIAIKRLRSKLEDAGEYIKSVRGEG
                     YKLC"
     gene            960..2258
                     /locus_tag="RPW04_001284"
     CDS             960..2258
                     /locus_tag="RPW04_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDX6295374.1"
                     /translation="MSRGFSRDDLKILSLSSLGGMLEFYDFIIFVFFASYISHLFFPP
                     TLDPFWALLNTYGTFAAGYLARPLGGIIMAHFGDKNGRKNMFMLSILLMVIPTFALGL
                     MPTFESIGYAAPVFLILVRLFQGIAIGGELPGAWVFISEHAPKQNLYFSIGVLTSAVV
                     AGILLGSIVTMIVKNIWSDDAIQGGMWRVPFIIGGIFGIISIYLRTYLSETPIFKKMQ
                     ELNDIDKMPIKTVFKKHKIDSIMSMFVSWVLTGCIVVMILLMPNFMPEAFKASGLEVG
                     RLTTIYMQMACIVFMCAGCFIYGSACDKFGVSKTTILFSAIFIVSVFAYFYILYNGGS
                     FNAVLSAYLIAGFFGAIGPCGAPFFMTALFPNKIRFSGISFSYNIAYAIAGGFTPPFA
                     VAMVHRFNPMYLGYYMVILGVVSVLCALWFIKFREDINKG"
     gene            2262..4196
                     /locus_tag="RPW04_001285"
     CDS             2262..4196
                     /locus_tag="RPW04_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004316398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HDX6295375.1"
                     /translation="MALIDLIEVSKRFGDKEILKDASFSVNEKERIAIIGKNGGGKST
                     LMKILCGAYEIDKGRIITQNNLSIQMLSQAPKFSDGLSVKDALNSELKEIFDARSEYE
                     NVLNLISDEPDNKDLLSKQDELVKFIESKDGWNIENKIERILDSFVLREYENRPINSL
                     SGGEIRRVALGALILKKPDVLLLDEPTNHLDVYMVRFLEELLLSSNQTIVFISHDRYF
                     IDRLATRSVEIEDGGLRNFEGGYANYLTKKEEILKSLAKTHETLIKQLKSEEEWLRRG
                     VKARLKRNEGRKQRVLSMREEAKKNPSLIRRVKLELERATKSFNQGGINQNRKKMLFE
                     CKNLSKSIDNKILFKDFNARVLQGERIGIVGRNGSGKSTLLKILLGELESDTGIIERG
                     EIKIGYFDQTRRGIDDDKSLIELFCPNGGDHIMVRGRNYHVYGYLKNFLFPKEFLDKP
                     VSVLSGGEKNRLALALLFTKEYDCLILDEPTNDLDIATINILEEYLLSFEGAILIVSH
                     DRYFIDKITNKLWAYENGKIEQIYMEYSEYLDIEDELEQLNDIEKELSLSSEQSKEKQ
                     KTAPVKLSYKQNQILQTYPNLIEALETRIKELNHALSTPEIYQKVGLQTLFEELEEKK
                     GELNSLENEYFEVLELSALN"
     gene            4206..5582
                     /locus_tag="RPW04_001286"
     CDS             4206..5582
                     /locus_tag="RPW04_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDX6295376.1"
                     /translation="MNDRQTWSSRLTYILAVAGATVGFGATWRFPYLVGQNGGGAYVI
                     TFCIAMIVIGIPMILVENAIGRRLHINSVDAFGGTANGKKIHKAWKIVGWMGLCGAFG
                     IMAYYMVIGGWVLNYIFNILVGNLNLSSVTDAITTAEFYDKNIINAPFAISIATIIFV
                     LINYVILARGAVAGIENAAKYLMPILFLLMICMVIRNLTLDGALEGVRFYLTPDFSKI
                     NTKLFIDVLGQVFFALSLGFGVMITLSSFVRKDEDLIKTSVITGVLNTVIAIIAGFMI
                     FPSLFTFGVSPDSGPSLVFKSLPIVFSHMFAGEVFAIAFFSLLMIAALTTSLPIYEVL
                     ITVLEEKFKIQRIKAIVFVLSFIFILGNIPSLMATNILSEFSIFGKNIFDAYDAISAT
                     IFFVLTSLLCAIFVGWVLKDEAKKEICYGTSSHKKVVDIWFFYIKYIIPFLILIVFVS
                     SFYDNFIK"
     gene            5631..6830
                     /locus_tag="RPW04_001287"
     CDS             5631..6830
                     /locus_tag="RPW04_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDX6295377.1"
                     /translation="MLEFLIGAYLIYTIYKITLSLIEINFININSKKQAVVLSETDYK
                     QAAKVAIINQKFSISNTVYSAILLIIWSIWGASFLQNMIAPNGSIFENTLLVVVFLLT
                     SAILQLPFDVYSSFVKDKKLGFSNITWKIFIVDTLKSFIMIVIFGGLVSWLILLCFEW
                     LGNSWWIWAFGLSFAIILLINLIYPTIIAPIFNKVTPLANEELKSAIGSLLTKCGFKS
                     SGVFVIDASKRDKRLNAYFGGFGATKRVVLFDTLIEKLTQNEIIAVLGHELGHFKHKD
                     LLKNIALMFVVLFLLFAIFGNIPNSIYSSLGLNSGGGSFFIFLFLYSPIVSAFFEPIM
                     SAFSRSHEFGADEFGASATTKNDMIQALKKLGNENKAFPISHPVYSFVYHSHPSLYER
                     ITKLENS"
     gene            6817..7602
                     /gene="prmC"
                     /locus_tag="RPW04_001288"
     CDS             6817..7602
                     /gene="prmC"
                     /locus_tag="RPW04_001288"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDX6295378.1"
                     /translation="MKIADALQRAKELGGSNLAFSLMGFHLKKDREWIFLHKEDKLDF
                     VDEFLILLDRYKNGEPLQYITRSCDFLDYEFEVGRGVLVPRYETEILVQKVASIAKNL
                     ENISICEIGIGSGVISISLAKILKNCKFTATDISEDALKYARKNISKFGVQIELFNTS
                     FLDGVEGDFDIIVSNPPYIAKDYKLDKWVMSEPSQALFGGEKGDEILKKIVNLAKDRT
                     KFLVCEMGYDQKASLSNELEKAGFKFEFYKDLAGFDRGFVAYR"
     gene            7613..8092
                     /locus_tag="RPW04_001289"
     CDS             7613..8092
                     /locus_tag="RPW04_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HDX6295379.1"
                     /translation="MKRIKDLYLFLLGICIGVEIAIGAFLAPIVFFPTKYIGEGVLTH
                     FQSGQLMTQVFLKYNILLLIVCAFCVIYEIINLIKNKDEVFNFKFSTFMLSLINVILG
                     ASFVFYFTDYIVNAQNMGAEATQTAAFASVHKVSEVVMKIMMLAQALLFFMRAYSKR"
     gene            complement(8089..8439)
                     /locus_tag="RPW04_001290"
     CDS             complement(8089..8439)
                     /locus_tag="RPW04_001290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295380.1"
                     /translation="MRINTNLANNYQISNENRSNIKLSLKNEKEMTTKNVSSTTSDEK
                     EESTTQKLQKQITKLKNQLMKIEQQISQMQNSNNPYSKDMLQSLNSQKASLMSRIQIT
                     LAQMLEATKAASSS"
     gene            8545..8940
                     /locus_tag="RPW04_001291"
     CDS             8545..8940
                     /locus_tag="RPW04_001291"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgC/FadM family acyl-CoA thioesterase"
                     /protein_id="HDX6295381.1"
                     /translation="MRIRIYYEDTDAGGIVYHSNYIKFCERARSEIVFKAGIKFSKDR
                     HFVVTKLLANYIKPAVLGDILEVKTCLESIGKASLSLNQNIYRTESINQVLKDPELLF
                     TAKITVGFMLYGKLGRLEPELVSLFSSKL"
     gene            complement(8880..10127)
                     /locus_tag="RPW04_001292"
     CDS             complement(8880..10127)
                     /locus_tag="RPW04_001292"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295382.1"
                     /translation="MKKFITILACVSILFSKTQIISEIPPAQIFYINLEPQICNTKCL
                     QDLIKNELYISFLARYNEQYSTNDLRSFFDTLNAENEISMQQNKRMGTEADVNIAVLI
                     PQKVIKSYSLIVTNAIFSYVLKRGINANIKFFLTDDESAIKLSNGILNLKKQGFKYVI
                     APLTNNGISTISKPQYSDLVFYIPTLNTNSTSIKAENIFFGGIDYKDQIDKLLEYSNA
                     KVAVFFDGSRLGNTLNNYILSVNQNAYIKEISGNKLNLNPILQNNSRLKNASIFLNTP
                     LIKTALLSSQFRVFNLDPYAILSTQINYNNALLSLTQPLDRKNMYIANSISTLDDEIT
                     TINEILGQNITYDWVAYSTIFGFDFLYTNFINTDANPLLNEQVIENQVIYNTKIMKTT
                     QFGFYSLDENNETSSGSSLPSLP"
     gene            complement(10124..10765)
                     /locus_tag="RPW04_001293"
     CDS             complement(10124..10765)
                     /locus_tag="RPW04_001293"
                     /inference="COORDINATES: protein motif:HMM:NF015146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDX6295383.1"
                     /translation="MSNNNILYQLYFYKAIGYKFINRAEISEILTHKNNFSNLKRLEE
                     QIKNCNLCELCKSRNKAVLGGKEASSNVMLVENFPSFDEDKNGSAAFNDELKECLNLA
                     QIDIQKLYFTHMLKCRPKDDMILKDTWYDQCYSYFEQEFDIVKPKLIISFGKDVFFRI
                     TKDRNCAFESVRGGIFKFKNSLIMPTYSAFWIIKNPSHKQKFIDDLKKIKGYL"
     gene            complement(10805..11278)
                     /locus_tag="RPW04_001294"
     CDS             complement(10805..11278)
                     /locus_tag="RPW04_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDX6295384.1"
                     /translation="MFRIREAVKDDLDDILSLIKELAQYENMGDQVNCTKDIFYESLF
                     IKKYANALVCEADNKIIGYAIYFYSFSTFLGKGGIYLEDLYVKKDFRNKGIGKEFLKF
                     LAKKCIDNSLGRLEWECLDWNEPSLAFYKKIGAKTLDEWISLRVDGDALKNLAKL"
     gene            complement(11345..12628)
                     /locus_tag="RPW04_001295"
     CDS             complement(11345..12628)
                     /locus_tag="RPW04_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HDX6295385.1"
                     /translation="MKNYLFLISFTAPLFSSDWVVSFDKIDSGNTAWLLISTSLVLFM
                     TIPGIALFYAGMVRKKNILATMMQSFTTVAMVSVLWMIIGYSIAFTNGNPFIGGFDRL
                     FLNGVSVVSSEQTLTVHPNASSIPESVFIVFQMTFAIISCAIITGSFAERVKFSSLMI
                     FIAIWVLVVYAPTAHWVWESNGWLAHHGVLDYAGGTVVHINAGVAGLVGAIILKPRLG
                     YKKEVMPPHNLVLTLIGVAMLWFGWFGFNAGSALAADARAAMAMLVTQVATAIGAITW
                     LFFEMIHKNKPSALGFASGAVCGLVGITPAAGYVNASGALAIGIISSGVCYYVITVIK
                     RKFNYDDSLDAFGIHGIGGIIGAILTAVFCDESISAATSSIKIQIIGVAITVVYSGIA
                     SYIILKIIDKTIGLRVSKDEEREGLDIASHGERLG"
     gene            complement(12638..>12968)
                     /locus_tag="RPW04_001296"
     CDS             complement(12638..>12968)
                     /locus_tag="RPW04_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HDX6295386.1"
                     /translation="VTAIIRPHKLEDVRSELDKIGVCGITITEIKGYGKQKGHVENYR
                     GTEYLINYIPKLKVEIAVNDHEVKNIVNAIISAAKTGVTGDGKIFVSNLDEVIRIRTN
                     ERGEDAI"
BASE COUNT         4104 a         1940 c         2288 g         4636 t
ORIGIN      
        1 aaattttatc tataaattcc acgccaagta ctagccaaaa acaaaacaga aatagcgcta
       61 taaaaacagc gtataaagct tgtattttta gcaaagtttg tagccttcgc cgcgaactga
      121 ttttatatat tctcctgcat cttctagctt tgagcgaaga cgcttaatgg cgatatttat
      181 agttttatcg ttggcgtttt ctttccaaat ttcttctaaa aaatagtctc tagtaagcaa
      241 gatatttcta tttttcataa actcataaag caagcaaaac tcaagtttcg taagttcttt
      301 tgtctttccg tctactttta cttcgtttgt ttttaaattt agaattatgt ttttaaattt
      361 ataaatggac gccgttttat tcgagcgctt aagaagagca tttatcctag caataagttc
      421 atttatctca aagggttttg ttatataatc atcgccaccg ctatcaaaac cgtctaattt
      481 gtctttgttt gagctttttg cggttagaaa aataactggt tcattatatc cttttgctct
      541 tagagacgct acaaatttag atccttctat gccgtttaaa tttctatcca cgataagaag
      601 atctgtatct tcttcgtcta aaaactgctc aactcgtttt gtgtctaaaa aggtcgttac
      661 gttaaatccg gctctattta aattgtattc caaaagctca caaagatcta tttcgtcgtc
      721 tatgacaatt atatttgcgc taatattttg attcataaag tatattttat caaaatatta
      781 ttaaacttct accatacaaa atatatctaa atttaaaaaa tagtataatt ttttttgaat
      841 ttaaaaaata ttttaaattc aagtagatta aagttacgat ttatcagcca tttaatcaaa
      901 cacttataaa actttatgta taattgacaa cttaaaattc tggtattaag ggaaagttta
      961 tgtcaagggg atttagtagg gatgatctaa aaattctaag cctttcgtcg cttggcggta
     1021 tgcttgagtt ttatgatttt atcatattcg tattttttgc ttcttatatc tctcatctat
     1081 tttttcctcc cactcttgat ccgttttggg ctttattaaa tacttatggt acatttgctg
     1141 ctggttatct tgctagacct cttggtggga taattatggc tcattttggc gataaaaacg
     1201 gacgtaaaaa tatgtttatg ctctctattt tgcttatggt tatacctact tttgctttag
     1261 gtcttatgcc tacttttgaa agtatcggtt acgctgctcc cgtgtttttg atattggttc
     1321 gtttattcca aggtatcgct ataggcggtg agcttcctgg ggcttgggtt tttataagcg
     1381 agcatgctcc aaagcaaaat ttatatttta gtataggagt tcttacttca gcagtagttg
     1441 ccgggatact tcttggaagt atcgtaacta tgatagtaaa aaatatctgg agcgatgatg
     1501 ctatacaagg cggaatgtgg cgcgtaccat ttataatagg aggaattttt gggataattt
     1561 ctatttatct tagaacttat cttagtgaaa ctcctatatt taaaaaaatg caggagttaa
     1621 acgatataga taaaatgcct ataaaaacag tttttaaaaa gcataaaata gatagcatta
     1681 tgtcgatgtt cgtaagctgg gttttgaccg gttgcatagt cgtaatgata cttttgatgc
     1741 caaactttat gccagaagcg ttcaaagcta gcggtttaga agtaggcaga ttaactacta
     1801 tatatatgca gatggcatgt atagtattta tgtgtgcggg atgttttatc tacggtagcg
     1861 cctgtgataa atttggagtt agcaagacta ctattttatt ttcggctata tttatagtgt
     1921 ctgtttttgc gtatttttat atattatata acggcggaag ctttaatgcg gttttatctg
     1981 cgtatctgat agccggtttt tttggcgcta tcggaccttg cggagctcca ttttttatga
     2041 ccgcactttt tccaaataaa attagattta gcggaatatc attttcttac aatatagctt
     2101 atgctattgc tggaggattt actcctccgt ttgctgtagc tatggttcat aggtttaatc
     2161 ctatgtatct tgggtattat atggttattt taggtgtcgt atccgtacta tgtgcgttat
     2221 ggtttatcaa atttagagaa gatataaata aaggctaaat catggcacta atagatctaa
     2281 tagaagtaag taaaagattt ggcgataaag agatattaaa agacgctagt tttagcgtaa
     2341 atgaaaaaga gcgaatagcc attataggca aaaatggcgg cggtaaaagc actcttatga
     2401 agatactttg cggcgcttat gaaatagata aaggtaggat catcactcaa aataatttat
     2461 ctatccagat gctctctcaa gctccgaaat ttagcgatgg gcttagcgtt aaagatgctt
     2521 taaatagtga attgaaagag atatttgacg ctagaagcga gtatgagaat gttttaaatt
     2581 tgatatctga tgaaccagat aataaagact tgttatctaa acaagatgag ctggttaaat
     2641 ttatagagag caaagatggt tggaacatag aaaataaaat tgagcgaatt ttagatagtt
     2701 ttgtacttag agagtatgaa aatcgcccta taaatagtct tagcggaggc gagataaggc
     2761 gcgtagcttt gggcgctttg atacttaaaa aaccagatgt tcttttactt gatgagccaa
     2821 ctaaccatct tgatgtttat atggttagat ttttagaaga gttgctttta agttcaaacc
     2881 aaaccatcgt atttataagc catgatcgtt attttataga tcgccttgct actcgttcag
     2941 tagagataga agatggaggt ttgagaaatt ttgaaggcgg atatgcgaat tatttaacaa
     3001 aaaaagaaga aattttaaaa tctttagcca aaactcacga aacacttata aaacagttaa
     3061 aaagcgaaga agagtggcta agacgcggag taaaagctag actcaaaaga aatgaaggaa
     3121 gaaagcaaag agttctttcc atgagagaag aagcaaagaa aaatccaagt cttataaggc
     3181 gtgtaaaatt agagttagag cgtgctacaa aaagttttaa tcaaggcgga ataaatcaaa
     3241 atagaaaaaa aatgcttttc gaatgtaaaa atctatcaaa aagcatagat aataaaatat
     3301 tatttaaaga ttttaatgct agagtattgc aaggcgagag aataggcata gtcggtagaa
     3361 acggcagcgg aaaatcaacc ttgcttaaaa ttttactcgg agagcttgag tctgatactg
     3421 gcatcataga gcgcggtgag attaaaatag gctattttga tcaaacaaga cgcggtatag
     3481 atgacgataa gtctttgatt gaactatttt gtccaaacgg tggcgatcat ataatggttc
     3541 gaggtagaaa ttatcatgtt tacggatatt taaaaaactt tttgttccca aaagagtttt
     3601 tagataaacc agtttctgtt ttaagcggag gtgaaaaaaa tcgccttgca ttagctcttt
     3661 tatttacaaa agagtacgac tgtttaatac ttgatgagcc tacaaacgat cttgatatag
     3721 ctactatcaa tattttagaa gagtatctac ttagctttga aggagctatt ttgatagtta
     3781 gtcatgatag gtattttata gataagatta caaataaatt gtgggcttat gaaaacggca
     3841 aaatagaaca aatttatatg gagtatagcg aatatctgga tatagaagat gaattagaac
     3901 agttaaacga tatagaaaaa gagctttcgc tgagtagtga acaaagcaaa gaaaagcaaa
     3961 aaacagctcc tgtaaaactc tcatataaac aaaatcaaat tctacaaact tatccaaatt
     4021 taatcgaagc tcttgaaact aggataaaag agttaaatca tgctctttct actcctgaaa
     4081 tttatcaaaa agtaggactt caaacgttat ttgaagagtt agaagagaaa aaaggcgagc
     4141 taaattcgct tgaaaatgag tattttgaag tgcttgagct ttctgctcta aattaaggat
     4201 aaaaagtgaa tgatagacag acgtggagtt ctaggcttac gtatatttta gcggttgcgg
     4261 gtgctactgt tggttttggt gcgacttgga gatttcctta tttggtcgga caaaatggtg
     4321 gcggtgctta tgttataact ttttgtatag ctatgatagt tataggaatt cctatgattt
     4381 tagtagaaaa tgctattggt agaagactac atatcaactc cgtagatgcc tttggaggca
     4441 cggcaaatgg taaaaagata cataaagcat ggaaaatagt aggttggatg gggctttgcg
     4501 gcgcttttgg aattatggct tattatatgg ttattggcgg atgggtactt aattatattt
     4561 ttaatatctt agtaggtaat ttaaatttaa gtagcgtgac agatgccatt actacggctg
     4621 agttttatga taaaaatatc atcaacgcac cctttgctat cagtatagct actattattt
     4681 ttgtactgat aaactatgtt attttagcaa gaggcgctgt tgccggcata gaaaatgcgg
     4741 ctaaatatct aatgcctatt ctatttttat tgatgatttg tatggttatt agaaacttaa
     4801 ctttagacgg cgctctagaa ggagttcggt tttatttaac gcctgatttt agtaaaatca
     4861 acactaaact ttttatagat gttttggggc aagtattttt tgcgctttca cttggctttg
     4921 gagttatgat aactctttct agctttgtaa gaaaagatga agatttgatt aaaacttcag
     4981 ttatcaccgg agtgttaaat acggttatag caattattgc cggatttatg atatttccgt
     5041 ctctatttac atttggagta tctcctgata gcggacctag ccttgtgttt aaaagtcttc
     5101 ctatagtatt ttcccatatg tttgcaggag aggtttttgc tatagcgttt tttagtttgc
     5161 ttatgatagc cgctcttact acgtctttac ctatttatga agttttaata accgttttag
     5221 aggaaaaatt taaaattcaa cgcataaaag ctatcgtatt tgttcttagt tttatcttta
     5281 tacttggcaa tataccatct cttatggcta cgaatattct ttctgaattt agcatttttg
     5341 gtaaaaatat atttgatgcg tatgacgcta taagcgctac tatatttttt gtgcttacat
     5401 ctcttttgtg tgcgattttt gttggttggg tattaaaaga tgaagcaaaa aaagagattt
     5461 gttatggtac aagcagccat aaaaaagtag tcgatatctg gtttttttat ataaaataca
     5521 ttataccgtt tttgatttta atcgtatttg taagcagttt ttatgataat tttataaagt
     5581 aaatttacta aactatgata atatttatta aaatttaaaa gaggtttttc atgctagaat
     5641 ttttgatagg cgcttatctg atttatacta tttacaagat aactcttagt ctaatagaga
     5701 taaattttat aaatattaat agtaaaaaac aagcagtagt attaagcgag actgattata
     5761 aacaagcagc aaaagttgct attataaatc agaaatttag tatatcaaat accgtatatt
     5821 cggctatttt gttaatcatc tggtctattt ggggtgcttc ttttttgcaa aatatgatag
     5881 ctccgaatgg cagtatattt gaaaatacgc tgttggtagt agtttttttg cttactagcg
     5941 ctattttaca gcttccgttt gatgtgtata gttcatttgt aaaagataag aaactcggtt
     6001 tttcaaatat cacgtggaag atatttattg ttgatactct aaagtcgttt attatgatag
     6061 ttatttttgg aggattggtg tcttggctta tactactatg ttttgagtgg cttggaaata
     6121 gctggtggat atgggctttt ggacttagtt ttgctattat tttgcttata aatttaatat
     6181 atcctactat catcgctccg atatttaata aagtaacacc gcttgcaaac gaagagttaa
     6241 aatcggctat tggttcgctt cttacaaaat gcggttttaa aagtagtgga gtttttgtga
     6301 tagatgctag caaaagagat aagcgtttaa acgcatattt cggcggattt ggagctacga
     6361 aaagagttgt tttatttgat actttgatag aaaaattaac tcaaaatgag attatagcgg
     6421 ttttaggaca tgagttaggg cattttaagc ataaagatct tcttaaaaat atagcgctta
     6481 tgttcgtagt gttattttta ctttttgcta tatttggaaa tataccaaac tctatttatt
     6541 catcacttgg gctaaacagc ggcggcggaa gcttttttat atttttattt ttgtattctc
     6601 ctatagtatc tgcgtttttt gagccgatta tgtcggcatt ttcaaggtct catgaattcg
     6661 gtgcggatga attcggtgcg tcagctacta caaaaaacga tatgatacaa gctcttaaga
     6721 aattaggcaa tgaaaacaaa gcttttccta tctctcatcc agtttatagc tttgtttatc
     6781 attcgcatcc tagtctttac gagaggataa caaagcttga aaatagctga tgctttacaa
     6841 agagcaaaag agctcggagg ttcgaattta gcttttagcc tgatgggttt tcaccttaaa
     6901 aaagatagag aatggatatt tttacacaaa gaagataagt tagatttcgt agatgagttt
     6961 ttaatactac tagatagata taaaaacggt gagcctttgc agtatataac tagatcttgt
     7021 gattttttag attacgagtt tgaggtcgga agaggagttt tagtaccgcg ttacgagact
     7081 gaaatacttg tgcaaaaagt agcgagtatt gctaaaaatt tagaaaatat aagtatatgc
     7141 gaaataggca taggtagcgg agtgataagt attagtcttg ctaaaatact aaaaaactgt
     7201 aaatttacag ctactgatat cagcgaagat gctctaaaat atgccaggaa aaatatatct
     7261 aaatttggag tacagataga actttttaat acgtcttttt tagatggagt ggagggtgat
     7321 tttgatataa tagtttcaaa tccaccatat atagcaaagg attataaact cgataaatgg
     7381 gttatgagcg aaccgtctca agctcttttt ggtggtgaaa aaggtgacga aatacttaaa
     7441 aaaatagtaa atttagcaaa agatagaaca aaatttttag tttgcgaaat gggatatgac
     7501 caaaaagcaa gtttatcaaa tgaacttgaa aaagcaggtt ttaaatttga gttttataaa
     7561 gatttggctg gatttgatag aggatttgta gcttatagat aaaggagaaa caatgaaaag
     7621 aataaaagat ttatatctat ttttgcttgg aatttgcata ggcgtggaga ttgctatcgg
     7681 ggcttttttg gctccaatag tattttttcc gacaaaatat ataggcgagg gagttcttac
     7741 tcactttcaa agtgggcagc tgatgactca ggtttttttg aagtataata tcttgttgct
     7801 tatcgtatgc gcattttgcg taatctatga gattataaat ttaataaaaa ataaagacga
     7861 ggtatttaac ttcaaattta gtacttttat gttgagcttg ataaatgtta tattaggtgc
     7921 ttcatttgtt ttttacttca cggattatat agtaaatgca caaaatatgg gggccgaggc
     7981 tactcaaaca gcggcatttg caagtgttca taaagtaagc gaagttgtaa tgaaaataat
     8041 gatgctagct caagctctgc tgttttttat gagagcatac tctaagcgtt agctagaaga
     8101 ggctgctttt gtagcttcta acatttgagc tagagttatt tgtatcctcg acatcagact
     8161 tgctttttga gaatttaatg attggagcat atcttttgaa tacggattat tgctattttg
     8221 catttgcgaa atttgttgtt ctattttcat taattgattt ttgagttttg ttatctgttt
     8281 ttggagtttt tgtgttgtac tctcctcttt ttcatcgctt gtcgtactgc ttacgttttt
     8341 agttgtcatc tctttttcgt tttttaaaga gagctttatg ttagatcgat tttcgtttga
     8401 aatttgatag ttgtttgcta aatttgtatt tatacgcatt ttttatcctt ttattgtaaa
     8461 tcgtcatagg cttatataat ttaatataaa aagctttatt aaagctgcta atttgtataa
     8521 tttttaaatt ttaaaaggaa tcttatgcga attagaattt attatgaaga taccgatgct
     8581 ggcggtatag tttatcattc aaactatata aaattctgtg aaagagctag aagcgagata
     8641 gtttttaaag ccggtatcaa atttagcaaa gatagacatt tcgtagttac aaaattactt
     8701 gcaaattaca taaaaccggc tgttttgggc gatattttag aagtcaaaac ttgccttgaa
     8761 agcataggca aggcaagttt aagtttaaat caaaatatat atagaacaga aagcataaat
     8821 caagtattaa aagatcccga actgcttttt acggcaaaaa tcacggttgg atttatgctc
     8881 tatggcaaac ttggcaggct cgagcctgag ctggtttcgt tgttttcatc taaactataa
     8941 aatccaaatt gagttgtttt cataattttc gtattataaa taacttgatt ttctatgact
     9001 tgttcgttta aaagaggatt cgcatctgta tttataaaat tagtatataa aaaatcaaaa
     9061 ccaaatatcg tagagtaggc tacccagtca taagtaatat tttgtcctaa aatttcattt
     9121 atagtagtta tttcatcgtc taaagtagat atcgagttgg ctatatacat attttttcta
     9181 tcaagaggtt gagtcaaact aagaagtgcg ttgttgtaat ttatctgtgt tgataaaata
     9241 gcatacggat ctaagttaaa aacacgaaat tgtgagctta aaagagctgt tttaatgagt
     9301 ggagtattta gaaaaataga tgcgtttttc agcctagagt tgttttgtaa aatcggattt
     9361 aaatttaatt tattgccgct aatctctttt atataagcat tttgattgac gcttagtatg
     9421 taattgttta gagtatttcc gagtctgcta ccgtcaaaaa atacagccac ctttgcgttt
     9481 gaatactcaa gtagtttatc tatctgatct ttgtagtcta taccgccgaa aaatatattt
     9541 tcagctttaa tgctagtcga gtttgtattt aaagtaggta tataaaatac taaatcagag
     9601 tattgcggtt ttgaaatggt tgatattcca ttatttgtca gcggagcgat gacatattta
     9661 aatccttgtt tttttaaatt taaaataccg tttgataact ttatagcaga ttcgtcatct
     9721 gttaagaaaa attttatatt tgcatttata cctcttttta atacgtaaga aaatatagcg
     9781 tttgtaacta tcaaagagta gcttttgatc actttttgcg gtattaaaac ggctatattg
     9841 acgtctgctt ctgttcccat acgtttattt tgctgcatag atatctcgtt ttcagcgttt
     9901 agagtatcaa aaaaacttct caaatcatta gtcgaatatt gttcattgta tcttgctaaa
     9961 aagcttatat atagttcgtt ttttataaga tcttgcaaac attttgtgtt gcaaatttga
    10021 ggttctaagt ttatataaaa tatttgagcc ggaggtattt cggatataat ctgagttttt
    10081 gaaaataaga tgcttacgca agccaatata gtgataaatt ttttcataaa tatcctttaa
    10141 ttttttttaa atcatctata aatttctgtt tatggctagg atttttaatg atccaaaaag
    10201 ccgaataagt cggcatgata agactatttt taaatttaaa aataccgcct cgcacactct
    10261 caaaagcgca atttctatct tttgtaatcc taaaaaaaac atctttacca aaactaatga
    10321 taagttttgg ttttactata tcaaattctt gctcaaagta agaataacac tgatcatacc
    10381 acgtatcttt taggatcatg tcatcttttg gtctgcattt tagcatatga gtaaaatata
    10441 gcttttggat atcgatttga gcaagattta agcactcttt taactcatca ttaaaagcag
    10501 cagatccgtt tttatcttca tcaaaactag gaaaattctc taccaacata acattagaag
    10561 atgcttcttt accccctaaa acagctttat ttctactttt gcatagttcg caaagattgc
    10621 aattttttat ctgctcttct aatcttttta aatttgaaaa attattttta tgagttaaaa
    10681 tctctgaaat ttcagctcta tttataaatt tatatccaat tgccttataa aaatatagtt
    10741 ggtataaaat attattattg ctcatttaat atactatcta aaaggttttt aaattcatat
    10801 aaatttatag ttttgctaaa tttttaagag catctccatc tactcttaga cttatccact
    10861 catcaagagt ttttgcacct atttttttat aaaatgcaag gcttggttca ttccagtcaa
    10921 ggcactccca ttcaagcctt ccaagagagt tatctataca tttttttgct aaaaatttta
    10981 aaaattcttt acctatacct ttgtttctaa aatctttttt aacatataaa tcttcaagat
    11041 atataccgcc tttcccaaga aatgttgaaa aagagtagaa ataaatagcg tagcctatta
    11101 tcttgttatc tgcttcacag actaatgcgt ttgcgtactt ttttataaat aacgactcat
    11161 agaatatatc ttttgtgcaa ttgacttgat cgcccatatt ttcatactgt gcaagctctt
    11221 ttatgagtga taaaatatca tccaaatcat cttttacagc ttctctgata cgaaacattt
    11281 tgtagccttt tgtttaaatt taaggctaca attatatcat tatattaatt aatgtaagta
    11341 aaatttaccc gagtctctca ccgtgacttg ctatatcaag tccctctctt tcttcatctt
    11401 ttgatactct taagccgatt gttttgtcta taatttttaa tattatatag ctcgctatac
    11461 cactataaac taccgttatc gctactccta ttatttgaat ttttatacta gacgtagctg
    11521 cgcttatgct ttcatcgcaa aataccgcag ttaaaatcgc tcctatgatt cctccaatac
    11581 cgtgtatacc aaaagcatct aagctatcat catagttaaa ttttcttttt attaccgtta
    11641 tgacgtaata gcaaaccccc gaagatataa tacctatagc caaagcgccg cttgcattta
    11701 cgtatcctgc tgcaggagtt atgccaacta gtccgcacac ggctccgcta gcaaatccaa
    11761 gagctgaggg tttattttta tgaatcattt caaaaaatag ccaagttatc gctccgattg
    11821 cggttgcaac ttgagttaca agcatcgcca ttgcggctct tgcgtctgct gctagagcgc
    11881 ttcctgcgtt aaatccaaac cagccaaacc aaagcatcgc gacgccaatc agcgttaaaa
    11941 ctagattatg cggaggcata acttcttttt tatatccaag gcgcggtttt aatataatag
    12001 ctccgacaag tcctgcgacc cctgcattta tatgtacaac ggttcctcct gcatagtcca
    12061 gtacgccgtg atgtgcaagc caaccgttgc tttcccacac ccagtgagct gtcggtgcat
    12121 aaacaactaa aacccaaata gctataaata tcataagaga gctaaattta actctctctg
    12181 cgaaagatcc tgtaattata gcacaagata taatagcaaa agtcatttga aatacgataa
    12241 aaacagactc tggaatgcta ctggcgtttg gatgaactgt gagagtttgc tcgcttgaga
    12301 ctacacttac tccatttaaa aataaacggt caaatcctcc tataaaagga tttccattcg
    12361 taaatgctat agaataacct ataatcatcc aaagtacgct taccatcgct actgtcgtga
    12421 agctttgcat cattgttgct agtatatttt tctttcttac catacccgcg taaaagagtg
    12481 ctataccagg tattgtcata aaaagtacca aagacgtgct tataagtagc catgcggtat
    12541 ttccgctatc tattttatca aacgaaacta cccaatcgct actaaaaagc ggagctgtaa
    12601 atgatattaa aaataagtag tttttcattt tattttccta tatagcatct tcgccgcgct
    12661 catttgtacg tattcttata acttcatcta aatttgatac aaatattttt ccgtctccgg
    12721 ttacgcctgt ttttgccgcc gatataattg catttactat atttttaact tcatgatcgt
    12781 tgacggctat ttctactttt agttttggta tataatttat cagatactct gttcctcggt
    12841 agttttctac gtgtcctttt tgttttccat aaccttttat ctctgttata gttataccgc
    12901 agactcctat tttatcaagt tcgcttctaa cgtcctcaag tttatgaggt cttataatag
    12961 ctgtaact
//
LOCUS       DAPPKW010000053        12811 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.053, whole genome shotgun sequence.
ACCESSION   DAPPKW010000053 DAPPKW010000000
VERSION     DAPPKW010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12811)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12811)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12811
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.053"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            30..596
                     /locus_tag="RPW04_001297"
     CDS             30..596
                     /locus_tag="RPW04_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheB"
                     /protein_id="HDX6295387.1"
                     /translation="MKPKLILIGASTGGPGHLKKLLFDLNLPKNTSVVIAQHMSSMFI
                     HSFVTQFNQDINPDVELLDKKMHLENKVYICEKNSVILNSQTLSANIDESKIVTTFNP
                     NVNMLFNSAVPVCKYVSVMAILLTGIGDDGAAGLDKLYKAGAKCIAENEESAIVYGMP
                     KRAKELNTKLETANLHDIKIKLERFINE"
     gene            589..1383
                     /locus_tag="RPW04_001298"
     CDS             589..1383
                     /locus_tag="RPW04_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HDX6295388.1"
                     /translation="MSEFVYDENGLQALISLIKKLCGNDLTNKKDIIKTKISNFATNK
                     NIPDMDALLKKVSFESKLRQELLNLITINETYFYRELNQLNSVIYYANTMALSDNVKI
                     LCAPCSSGEEVYSLGMIAKTIGIDRQRLKIVGIDINSEVIQRCKDGIYNQRSIQNVSS
                     NQKNMYFNKVDDMYQIKKELMPQMEFKVANIFDESLFKLGMFDIILSRNMMIYFDEEY
                     RLMTIERFHKILKPFGRLYVGHADLVPYTDLYTKIVDIGSSYYEKL"
     gene            complement(1378..2571)
                     /locus_tag="RPW04_001299"
     CDS             complement(1378..2571)
                     /locus_tag="RPW04_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009294609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDX6295389.1"
                     /translation="MIKYLALLRYNSNLRILTSIQFICYFGMWFSHTGIFTLLIELNA
                     PVWAVTLAAAMAFIPNVFLAPINGIIIDKFSAKPMMIFLMFVETVTVLMLVFIDDLSL
                     LPLLFILIFVRMGTGVTYFQTEMSLLPSLMTKKNLKLANEIHSIIWAASYTAGMGIAG
                     VFIHYFGIKEAFLFDFGLYILGMFLLTKLRIPDIVKTRTQKAFEMMKDGLKYIKNSPI
                     IMHLILLHSFVGITAYDNLIALMANYKYKEIMSVSLIIGFMNMTRAISLVVGPIALSK
                     FTNTKTLIWLFVGEFLGISLWAILQFDYYLGLIGLVAAGFCTSTLWSFTFTMLQNNCD
                     KKYYGRVIAYKDMVYFIVSASVSLLIGVAYELGMGLAMITFIMGFMFFIGAFYYKFVY
                     EKYFL"
     gene            complement(2568..2942)
                     /locus_tag="RPW04_001300"
     CDS             complement(2568..2942)
                     /locus_tag="RPW04_001300"
                     /inference="COORDINATES: protein motif:HMM:NF016087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein NlpE N-terminal
                     domain-containing protein"
                     /protein_id="HDX6295390.1"
                     /translation="MKNMILSIVAFTIFVGCGSANQPTNDRKTFETTLPCADCSEIKS
                     ILQLDSNGSFILYDTYVKDINQTFTQSGLYKTDGEIIIITSDDNETFYFKKDGLNLNR
                     LDADKNLIEGEFKDYYTYKLQK"
     gene            3114..4160
                     /locus_tag="RPW04_001301"
     CDS             3114..4160
                     /locus_tag="RPW04_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehypoxanthine futalosine cyclase"
                     /protein_id="HDX6295391.1"
                     /translation="MNRINKKEALNLIKNADLNELGKLAFDKKLKLHPDKITTFIVDR
                     NINYTNTCWVDCKFCAFYRHVNEDEAYILSFDEIDQKIEELIAIGGTQILFQGGVHPK
                     LKIEWYENLVEHIAKKYPDIDIHGFSAVEIDYIAKISKISTLEVLKRLQAKGLYSIPG
                     AGAEILSDRVRDIIAPKKCSTQTWLDIHKQAHDIGMKTTATMMFGTVETDEEIVEHWD
                     KIRSLQDQTGGFRAFILWSFQSENTKLKSEYPTIKKQSPNRYLRLLAVSRLFLDNFKN
                     IQSSWVTQGSYIGQLALKFGANDLGSTMMEENVVKAAGASFRMSQNEMIELIKDIGEF
                     PAKRNTNYDILERF"
     gene            complement(5012..6397)
                     /locus_tag="RPW04_001302"
     CDS             complement(5012..6397)
                     /locus_tag="RPW04_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HDX6295392.1"
                     /translation="MLKKFILALTCIAAIGFADSVGNINLTKTMKVDRNLSPLAVKCI
                     ECHKDKTPGIVNDWKSSRHAHAAVSCVDCHAVPADSPMAIKKEHPKDSGNHVSILVSP
                     KTCAKCHAKEVEQFQQSGHARGGVQMFAKKGMVELMYHYEANGKPYENDAPFYAGNEN
                     LKDAPASTGCIQCHGMEIKLDKEGYPLPGKGWPNYGIGNAYPDGSVGSCKSCHSSHKF
                     DMTEARKPSACASCHLGPDHPNIEIYNNSMHGKIFNAEGNTWKWDSAPDTWDVPDYRA
                     PTCATCHMSGIGDLNTTHNVSVRLKWNLWAPHSNLRTGGYDTAAETYAKEGKISIGTP
                     LAGNINGPEAARTEMKQVCKSCHSSKATDSFFVSADNHVELYNTYHTEAKKMLDDLKA
                     KGLLKKDEWSDEFQITYYYLWHHQGRRMRMGAVMGAPDYAHWHGVFEVQQDIKKLRTI
                     YDARIKSGKIE"
     gene            complement(6409..6960)
                     /locus_tag="RPW04_001303"
     CDS             complement(6409..6960)
                     /locus_tag="RPW04_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HDX6295393.1"
                     /translation="MRKTKLFTIAIFIIGGLVGLVFALGIAQFMYVTGGDKFCTSCHV
                     MEPMVSSYKNDIHGGNNKVGFKAECVTCHLPHDNIVKYTYQKAVNGMVEGAITLFGSP
                     EKFDWETRRKESKRYVYDSGCMHCHGDIKNVSSQNMKSFLPHRDYFAKNINKTCVECH
                     EHVGHKNLGFHLKAKFGDFNITK"
     gene            complement(7089..7730)
                     /locus_tag="RPW04_001304"
     CDS             complement(7089..7730)
                     /locus_tag="RPW04_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HDX6295394.1"
                     /translation="MLIKEIPFFSGLNDEDLKRLENISVIKSYKKDEFLFMEGDEPQW
                     FNVLVKGTIKIYKSTPKGKEIFLHTLRPISLVAELVNFENIPYPASGVFLNNAEVLRI
                     NYNKFKTDFLSNPSICFELLKSLSQKLRIMNGVLQNELTLKSDAKVAKFIVENPDLFS
                     TIKHTQIASILNIAPETLSRTISQFKQQGIIKLDDNLNLTFKDNEKLISLFNI"
     gene            complement(7746..8726)
                     /locus_tag="RPW04_001305"
     CDS             complement(7746..8726)
                     /locus_tag="RPW04_001305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295395.1"
                     /translation="MRIENLTRLVDGELQNNPKISMVSGFCLEADDVKNGFAFIALNA
                     TRDDAILAIQNGAYALITDLNLEIYDDEIAIIKVDNLASSVLRLARFIATQKELKFFH
                     LNVAQNAIFSCLSLPKKISLISSNLNEILTKIINAAHNDIFLSKDEILLNRIFEKTAI
                     KDSQNFSLIHSHSIFYTSIMFLDTYYENLNFPSIFASDLAKVMQFFYDYNLNFNIKDF
                     REFNHFRAIFVDRFLNIKPFGASYRAFICENNEELFITEAKFLKSKFENTFICTPINH
                     RLRDMADFCFESLNDLKMMSDFKYALVFSDFHELESSLNETKTERTLFDF"
     gene            complement(8726..10624)
                     /gene="metG"
                     /locus_tag="RPW04_001306"
     CDS             complement(8726..10624)
                     /gene="metG"
                     /locus_tag="RPW04_001306"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDX6295396.1"
                     /translation="MKKFITTPIYYVNDVPHIGHAYTTIIADTMARYYRLVGYDTFFL
                     TGTDEHGQKIEEAAKAHCKTPKEYADEVSAKFRSLWDEFEISYDHFIRTTDDYHKFTA
                     QNVFLKMYEKGDIYKGEYEGNYCVSCETFFPQNQLIDDEFCPDCGKKTRIVKEESYFF
                     KLSDYQDKLLKWYEKGNCILPKGKKNEVISFVKGGLKDLSITRTSFEWGVKLPSSLNE
                     PRHVMYVWLDALINYLSALGYTTDNKRMDYWNDTMHLVGKDILRFHAVYWPAFLMSLE
                     LPLPTSVAAHGWWTRDGKKMSKSIGNVVDPRAVANAYGLEAFRYFLLREVPFGQDGDF
                     SQKALIDRINSELSNDLGNLLSRIVGMSSKYSNYEINSQNVTKLYLNELESAKTHLDQ
                     AIEAINEVATNRYLEELWKVLSLANASVAKYEPWNLIKEGKTDEANALVALVANLLAK
                     VAVLLSPAMPKSSDKIAKTLGFEINTKTYNDIILKNELLNLKSSSTEPLFTKVESELM
                     AVPDMSSAIKEENVSKDSEIKIDYFKKCVIKVGTILECNNIDGSDKLLKFKIDLGEAN
                     PRQIISGIAKFYDPKDLIGKQVCVLANLKPAKIFKHLSEGMILSAEDGKLVLLSTLAP
                     VKNGSLVG"
     gene            complement(10643..10828)
                     /locus_tag="RPW04_001307"
     CDS             complement(10643..10828)
                     /locus_tag="RPW04_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015643425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295397.1"
                     /translation="MKEFVALQFEITTSKLKQCQQSNSLNSCMSCELFFKCENRKNYV
                     NATYEKMNEGRGGEFDF"
     gene            complement(10965..11825)
                     /locus_tag="RPW04_001308"
     CDS             complement(10965..11825)
                     /locus_tag="RPW04_001308"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HDX6295398.1"
                     /translation="MQKGYKMQEIIKTIEKIAVKISEELKYADLGYTDHANSTGDTQL
                     KLDVKSDNIITQEFIGVSSVRSLVSEEKEDALDIHKDGEFIIAYDPLDGSSLVDVNFA
                     VGSIFGVYKNELKPSNLVAAIYCIYGPRLEMVVCEDTPKLYRLDRDGSFKFIKDLSLK
                     EKGKLNATGGTQKGWSGAHRDFIKTLFDEGYRLRYSGAMVSDLHQILLKGGGLFSYPA
                     TTDAPNGKLRVTFEVLPFAFIYERAGGATTNGENKSLFEINLEKIHQTTPCFFGSKYE
                     INRLLEFYND"
     gene            complement(11809..12375)
                     /locus_tag="RPW04_001309"
     CDS             complement(11809..12375)
                     /locus_tag="RPW04_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein MobB"
                     /protein_id="HDX6295399.1"
                     /translation="MKRLAVAVSGRSGSGKTTLIAKIASKLIEQGYKVAITKHDPGDK
                     SKFDKEGKDSYLFSSLGADVAVVSPKRTTVLLQSGLFGGDERVGSEAHDNKTEEFSPS
                     KTECENDLKKLISYFGEFDYLIVEGLKFIPLPRISVFRDEVDDRYKSFSDAYATNLDG
                     FANGNKPKFGLDDIENIIKWIDNNAKRV"
     gene            complement(12522..>12811)
                     /locus_tag="RPW04_001310"
     CDS             complement(12522..>12811)
                     /locus_tag="RPW04_001310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295400.1"
                     /translation="IRKIELEEKNKEYYFQLNQKEAQKCQQKTEQLNAEIQQNLFKIL
                     FSLISLAFYISVIVFSGICFIFYFLFKFVPFYILFDLFVIVIVGIGIYFLY"
BASE COUNT         4351 a         2299 c         1954 g         4207 t
ORIGIN      
        1 aattaaattt tagctaggag ttttcaaatt tgaaaccaaa acttatcctt ataggagcat
       61 ccacaggcgg tccaggtcat cttaaaaagc tactttttga cctaaacctt cctaaaaata
      121 catcagtagt gatagctcag catatgagtt ctatgttcat ccatagtttt gttacacagt
      181 ttaatcaaga tataaatccg gatgtagaac tgctagataa aaaaatgcac cttgaaaaca
      241 aagtgtatat ttgtgagaaa aatagcgtaa tactaaactc acaaacatta agtgcaaaca
      301 ttgatgaaag caaaattgta actactttta atccaaatgt caatatgctg tttaactcag
      361 cagttcctgt ctgtaaatac gtaagcgtga tggcaatatt attaaccggt ataggagatg
      421 atggcgctgc agggcttgat aaattataca aagccggagc aaaatgcata gccgaaaacg
      481 aagaatcggc catagtatac ggtatgccaa aacgcgcaaa agagttaaat acaaaattag
      541 aaactgcaaa cttacacgat ataaaaatta aattagagag atttattaat gagtgaattt
      601 gtatatgatg aaaatggact acaagcgtta attagtctta ttaaaaaact atgcggcaac
      661 gatctaacca acaaaaaaga tatcatcaaa accaaaatat ccaactttgc cacaaataaa
      721 aatataccgg atatggatgc tttattaaaa aaagtttctt ttgaatcaaa actcagacaa
      781 gagcttttaa atttaataac cataaacgaa acatattttt acagagagtt aaatcaacta
      841 aactctgtta tatactatgc aaatactatg gctttgagcg acaacgtaaa gattttatgt
      901 gctccttgca gtagcggcga agaggtatat tctttaggaa tgatcgcaaa aactatcggt
      961 atagatagac aaagactaaa aatagtaggt atagatataa actcagaagt tatccaaagg
     1021 tgcaaagacg gtatatacaa ccaaagatct atacaaaacg taagctcaaa tcaaaaaaat
     1081 atgtatttca acaaagttga tgatatgtac caaatcaaaa aagagctaat gcctcaaatg
     1141 gagtttaaag tagcaaatat atttgatgaa agcttattta aattaggaat gtttgatata
     1201 atcttatcaa gaaatatgat gatatatttc gatgaagagt ataggctgat gactatcgaa
     1261 agatttcata agatcctaaa accttttgga agattatacg taggtcacgc cgatctagtt
     1321 ccatacacag atctttatac gaaaatagta gatatcggct caagctacta tgagaagtta
     1381 taaaaaatac ttctcataga caaatttata ataaaacgca cctataaaaa acataaatcc
     1441 cattataaat gttatcatag caagccccat gccgagttca taggctactc ctatgagtaa
     1501 cgatacgcta gcagatacta taaaatacac catatcttta taagctataa cgcgcccgta
     1561 atactttttg tcgcagttgt tttgaagcat tgtaaatgta aatgaccaaa gagtagatgt
     1621 acaaaatcct gccgccacca atcctataag ccctaagtaa taatcaaact gcaaaattgc
     1681 ccataaagat atacccaaaa actcaccgac aaaaagccaa ataagcgtct ttgtgtttgt
     1741 aaatttacta agtgcgatag gtcctaccac aagcgatata gctctagtca tattcataaa
     1801 accgattatc aaagatacgc tcattatctc tttgtatttg taatttgcca taagagctat
     1861 cagattatca tacgcagtta tgcctacaaa agagtgaagt agtataagat gcattataat
     1921 aggactattt tttatatatt ttagaccgtc tttcatcatc tcaaatgctt tttgcgttct
     1981 tgtttttacg atatctggaa ttctaagctt tgtgagtaaa aacattccca aaatatacaa
     2041 gccaaaatca aataaaaatg cctctttaat gccgaaataa tgtataaaaa ctccggctat
     2101 gcccatacct gcagtatatg atgcggccca gatgatagag tgtatctcat ttgctagttt
     2161 gagatttttt ttggtcatca agctaggaag caagctcatc tctgtttgaa aataagtcac
     2221 tccggttccc attctaacaa atataagaat aaacaaaagc ggaagcaaac taagatcatc
     2281 tataaaaact agcatcaaaa cagtcactgt ttctacaaac ataagaaata tcatcatagg
     2341 ttttgcacta aatttatcta ttattatgcc gtttatcgga gctaaaaaaa catttggtat
     2401 aaacgccatc gccgcagcaa gagttacggc ccacacagga gcgttaagct ctattaaaag
     2461 agtaaaaatt ccggtatgtg aaaaccacat tccaaagtaa caaataaatt gtatagaagt
     2521 taaaatccta agatttgaat tgtatcttag gagtgcgaga tattttatca tttttggagt
     2581 ttataggtat aataatcttt aaactcacct tctattaaat ttttatcagc atctagtcta
     2641 tttaaattta aaccgtcttt tttaaagtaa aatgtctcgt tatcatcgct agtaattatt
     2701 ataatctcac cgtcagtctt atataaaccg ctttgagtaa aagtttggtt tatatctttt
     2761 acataggtat catacaagat aaaacttccg ttgctatcta gctgcaaaat ggactttatc
     2821 tcactacaat cagcgcaagg gagcgtagtt tcaaatgttt ttcggtcgtt agtaggctga
     2881 tttgccgatc cgcaaccaac aaaaatagta aatgctacta tggacaaaat catatttttc
     2941 attttaactc cttatttttt gaaacgcaat tatatccaat attttataaa tttgctcacg
     3001 tatatatata aaatttaatt atattttata atgttagata ttaaaataat cgatattttt
     3061 aagccatctt tttgcaaatt atgataaaat ttagcccaaa aaaaggataa attttgaaca
     3121 gaataaacaa aaaagaagct ctaaatttga taaaaaacgc agatctaaac gaacttggaa
     3181 aactagcatt tgacaaaaaa ctaaaactgc atccggacaa aatcacaact tttatagtcg
     3241 atagaaatat aaattataca aatacatgct gggtagattg taaattttgt gcgttttatc
     3301 gccacgtaaa tgaagatgaa gcatatatac ttagctttga tgagatagat caaaagatag
     3361 aagaactaat cgccataggc ggcactcaga tactatttca aggaggcgtt catccaaaac
     3421 taaagatcga atggtacgaa aacttagtag agcacatagc aaaaaaatat ccggatatag
     3481 atatacacgg attttctgca gttgagatag actatatagc aaaaatttcc aaaatttcca
     3541 ctttagaagt gttaaaaaga ctacaagcaa aaggactcta tagcatacca ggagccggag
     3601 cggagatact aagtgataga gtaagagata taatagcccc taaaaagtgc agtactcaaa
     3661 catggctaga tatccataag caagctcacg atataggtat gaaaactacc gccactatga
     3721 tgtttggtac ggttgaaaca gatgaggaaa tagtagaaca ttgggataaa atacgaagcc
     3781 tacaagatca aacaggcgga tttagagcct ttatattatg gagttttcag tctgaaaata
     3841 cgaaactaaa atcggaatat cctactataa aaaaacaatc tccgaatcgt tacttaagac
     3901 ttctagcagt ttcaagacta tttttagata atttcaaaaa tatacaaagc agttgggtaa
     3961 cgcaaggcag ctatatagga caattagcac ttaaattcgg agcaaacgat ctaggaagta
     4021 ctatgatgga agaaaacgta gtaaaagccg ccggagcaag ctttagaatg agtcaaaatg
     4081 agatgataga acttatcaaa gatataggcg aatttcctgc taaaagaaac actaactatg
     4141 atattttaga gcgcttttaa gctctaaata ttatttctca taaatattat atttttgaat
     4201 ttaaaatatc ttaactcaaa aacaaaattt catatgaact atacgacata ctaatttata
     4261 ctcggtggat ggttgaaagg tgatgtatta actagtgaaa agattgacct attaaaaagc
     4321 aatgatactt aaaaatgtat ttaagaataa tgagaaatta attctagatg gatttaatat
     4381 accgccatta aagataaatt agaaatctag tacaaaaacg attcacttaa aaacaatcag
     4441 aatctaaaac tactaaataa caacgaagct tactataaaa tattagaacg gttgaaaata
     4501 ctttttttag ataaatatac gaatattaga acaaataaat gttaattaga tataaaagag
     4561 agatttataa aaataaagaa aagttaaacg aggctaagag taactgcaga ttataatata
     4621 gacggctata cgtatggtgg aagtatcttt taaaacccca aaatgctatc tttaggagat
     4681 atcgaaaaag agaaaccaaa cgagttatta caacaagtat ctactgataa tgaaagagct
     4741 agtattttat agatttttat aatattaatg ctaaatgaag taaaaagatt gaagtagata
     4801 tattaccatc aagatatcag gaatattaaa tttaaaagca gaaaatgggg gtatagtttt
     4861 agacacgaac tcagccaccg tataaaaaca ataacttaaa ttttatagtt ataaaaaata
     4921 tagataaaat ataaaataat aaaaaaagtg tgtttttgat agagtaaatt taaaaagccc
     4981 cacataatgc agggcttttt agaacaaaga actattctat ttttccgctt ttgatacgag
     5041 cgtcatagat agtacgaagt ttcttaatgt cttgttgtac ttcaaatact ccatgccagt
     5101 gagcatagtc aggagcgccc atcacagcac ccattctcat acgacgacct tgatgatgcc
     5161 ataaatagta gtaagttatt tggaactcat cagaccattc gtctttcttg agaagacctt
     5221 tggctttcaa gtcatcaagc atttttttag cttctgtgtg ataagtattg taaagttcaa
     5281 catggttatc agcacttaca aagaatgaat cagttgcttt tgaagagtgg caagatttac
     5341 atacttgttt catctcggtt ctagcagctt ctggtccatt tatatttcca gctagtggtg
     5401 ttcctatgct tattttacct tctttagcat aagtttcagc agctgtgtca tatccgcctg
     5461 ttcttaggtt gctatgtgga gcccatagat tccattttag acgtacgcta acattgtgag
     5521 tagtgtttag atcacctatt ccactcatat gacaagtagc acaagtcgga gctctatagt
     5581 ccggaacatc ccaagtatct ggggcactat cccatttcca tgtattaccc tcagcattga
     5641 agatctttcc gtgcattgag ttgttgtaaa tctcaatgtt tggatgatca ggtccaaggt
     5701 ggcaagatgc acaagcagat ggttttctag cttcagtcat atcaaattta tggctagagt
     5761 ggcaagattt acaactacct acgctaccat caggataagc attaccgata ccatagtttg
     5821 gccagccttt tccaggaagc ggataaccct ctttatcaag tttaatttcc ataccgtggc
     5881 attgtataca accagtagaa gcaggagcat cttttagatt ctcatttcct gcgtaaaatg
     5941 gtgcatcatt ttcatatggt ttaccattag cttcatagtg atacataagt tcaaccatac
     6001 cttttttagc aaacatttga actccgcctc ttgcgtgacc gctttgttgg aattgttcaa
     6061 cttctttagc gtgacattta gcacaagttt ttgggctgac caaaatactt acgtgattac
     6121 cactatcttt tgggtgctct tttttgatag ccataggact atcggcagga accgcgtgac
     6181 aatccacgca acttacagca gcgtgagcat ggcgagaact tttccagtca tttactatac
     6241 ctggagtttt gtctttatga cactcgatac atttaacagc caatgggctt aaatttctat
     6301 caaccttcat tgtctttgta agattgatat ttccaacgct atcagcaaaa ccgatagcgg
     6361 cgatacaggt taatgctaaa ataaattttt taagcatttc tcatctcctt actttgtaat
     6421 attgaaatca ccaaatttag ctttaaggtg aaaaccaaga tttttgtgtc cgacatgctc
     6481 gtgacattcg acacaggttt tatttatatt tttggcaaaa taatcacggt gcggtaaaaa
     6541 tgacttcata ttttgtgaag aaacattttt tatatcacca tgacagtgca tacagccact
     6601 gtcatacaca tatcttttag actcttttct tcttgtttcc caatcaaatt tttcaggact
     6661 tccaaagagt gtaatggcac cttcaaccat accattaaca gccttttgat acgtatattt
     6721 gactatattg tcatgcggta agtgacaagt aacacactct gctttaaatc caactttgtt
     6781 atttcctcca tgaatatcgt tcttatacga actaaccata ggttccataa catgacagga
     6841 cgtgcaaaac ttatctccac cagtcacata cataaactgt gctataccaa gagcaaatac
     6901 aagaccaact aagccaccta taataaagat agctatagta aaaagctttg tctttctcaa
     6961 ctccactccc tccctagaaa attgcttttc tacgatttag aatgttattc taacatattt
     7021 ttaatatata tacaacgact ttcgtcaagt tttttggggt ttttataaat ttatgtaaat
     7081 tagtaacact aaatattaaa taagcttata agcttttcat tatctttaaa ggttaaattt
     7141 agattatcat ctaattttat aatgccttgt tgcttaaact ggcttatagt tctagataaa
     7201 gtttctggag ctatatttag tatagacgct atctgagtat gtttgatagt ggaaaataga
     7261 tcaggatttt ctactataaa tttcgctacc ttagcatcgc ttttcaaagt tagttcattt
     7321 tgcaatacac cattcataat cctaagtttt tgcgaaagag attttaaaag ttcaaagcaa
     7381 atagacggat tcgataagaa atctgtttta aatttattat aatttatacg tagaacctcg
     7441 gcgttgttta aaaatactcc gcttgccgga tatgggatat tttcaaaatt tacaagctcg
     7501 gcaactaagg atataggacg aagcgtatgt aaaaatatct cttttccttt tggagtgctt
     7561 ttataaattt taatagtacc ttttacaagc acattaaacc attgtggttc atctccttcc
     7621 ataaacaaaa attcatcttt tttataactt tttatcacag atatattttc aagtcttttt
     7681 aaatcctcat cattcaaacc gctaaaaaat ggaatttctt ttatcaacat gtcatttatc
     7741 cttcatcaaa aatcaaaaag agtacgctcg gttttggtct catttagact actttcaagc
     7801 tcatgaaaat cagaaaatac aagtgcgtat ttaaaatcgc tcatcatttt taaatcattt
     7861 aaactctcaa aacaaaaatc tgccatatct ctaagacgat gattgatagg ggtacatata
     7921 aacgtatttt caaatttaga ctttaaaaac ttagcttctg ttataaaaag ctcttcatta
     7981 ttttcgcata taaacgctct ataactagct ccaaatggct tgatatttaa aaatctatct
     8041 acaaaaatgg ctctaaaatg gttaaactca cgaaaatctt ttatattgaa atttagatta
     8101 taatcataaa aaaactgcat aactttagcc aaatcactag caaaaataga cggaaaattc
     8161 aaattttcgt agtatgtatc aagaaacatt atgctagtat aaaaaataga gtgagaatgt
     8221 atcaaagaga aattttgact atcttttata gctgtttttt caaaaattct atttagtaaa
     8281 atctcgtctt tgcttaaaaa tatgtcatta tgtgcggcat ttattatttt tgttaaaatc
     8341 tcatttagat tagaacttat caagcttatt tttttaggca agctcaagca gctaaatata
     8401 gcgttttgag caacatttaa atgaaaaaat ttaagctctt tttgtgtagc tataaaacga
     8461 gctaaacgaa gcacgctaga agctaaatta tcaaccttta ttatagctat ctcatcatca
     8521 tatatttcta agtttaaatc ggttataaga gcgtaagctc cgttttgtat agccaaaata
     8581 gcatcatctc tagtggcatt caaagctata aaagcaaaac cattttttac atcatcggct
     8641 tctaagcaaa atccactcac catacttatt tttgggttat tttgcagctc tccatcaaca
     8701 agacgagtta gattttctat acgcattatc cgactaaact tccgtttttt acaggcgcca
     8761 aagtgctaag aagtactaat ttaccatctt ctgcgctaag tatcatgcct tcgcttaaat
     8821 gtttaaatat cttagctggt tttaaatttg ccaaaacgca aacttgtttt cctatcagat
     8881 cttttggatc gtaaaattta gcgataccgc ttatgatctg acgcggatta gcttcgccaa
     8941 gatcgatttt aaattttaaa agtttatcgc taccatcaat attattacac tctaagatag
     9001 ttcctacttt tatcacacat tttttaaagt agtctatttt tatctcactg tcttttgaaa
     9061 cattctcttc tttgattgca ctgctcatat caggaacagc cataagctcg gattctactt
     9121 tagtaaaaag aggttccgtg ctgcttgatt ttaaatttaa aagctcattt ttcaaaataa
     9181 tatcgttata agtcttagta tttatctcaa agcccaaagt tttagctatt ttatcactac
     9241 tttttggcat agccggactt aataaaacag ctacttttgc aagtaaattt gctactaaag
     9301 cgactaaagc gtttgcttcg tctgttttac cctcttttat caaattccaa ggttcatact
     9361 ttgctacact tgcgtttgct agacttaaaa ctttccaaag ctcctccaaa taacgatttg
     9421 tagctacttc gtttatagct tctatagctt gatcaagatg agttttagca gattctaact
     9481 catttaaata aagcttagtt acgttttggc tatttatctc ataatttgag tatttagagc
     9541 tcattcctac tatacggctc agtaaatttc ctaaatcatt actaagttcg ctatttatac
     9601 gatcaataag agctttttgc gaaaaatcac cgtcttgacc aaacggtact tcgcgaagca
     9661 aaaaatacct aaaagcctca agtccgtaag catttgccac ggctcttgga tctactacat
     9721 ttcctatact tttactcatt ttcttaccat ctcttgtcca ccaaccgtga gctgccacgc
     9781 tagtaggaag aggaagttct aaactcatca aaaacgcagg ccaataaacg gcatgaaatc
     9841 ttaagatatc ttttccaact aaatgcatcg tatcgttcca ataatccatt cttttgttat
     9901 cggtagtata gccaagcgcc gaaagatagt ttataagcgc gtctagccac acgtacataa
     9961 catgacgcgg ctcatttaaa ctactaggaa gcttcactcc ccattcaaaa ctggttctag
    10021 tgatagatag atcttttaaa ccgcctttta caaagcttat aacctcattt ttcttgcctt
    10081 ttggaagtat acaattgccc ttctcatacc attttaataa cttatcttga tagtccgaga
    10141 gtttgaaaaa ataactctct tctttgacga ttcttgtttt tttaccacaa tccggacaaa
    10201 actcatcatc tatcagctga ttttgcggaa aaaacgtctc acaactaacg cagtaatttc
    10261 cttcatattc gcctttatat atatcacctt tttcatacat ttttaaaaat acattttgcg
    10321 cggtaaattt atggtagtca tcggtagttc ttataaaatg atcataacta atctcaaact
    10381 catcccaaag agatctaaac ttagcgctta cttcatcggc gtactcttta ggtgttttac
    10441 agtgtgcttt agcagcctct tctatctttt gaccatgctc atcggttcct gttaaaaaaa
    10501 acgtatcata tcctactaga cggtaatacc tagccatggt atcggctata atagttgtgt
    10561 acgcgtgacc tatatgaggc acgtcattta cataataaat cggtgttgtt ataaattttt
    10621 tcatctattt ccttttttaa atttaaaagt caaactcgcc acctctgccc tcgttcatct
    10681 tttcataggt ggcgttgaca taattttttc tattttcaca tttaaaaaat agctcgcagc
    10741 tcatacaact gtttaaagaa ttactctgct ggcactgttt gagttttgat gttgttatct
    10801 cgaactgaag cgctacaaac tcttttatct tatcgcagcg aaatacgtta gagcaatttg
    10861 agcaactttt atcgacatct ctaacgcttt tatttcggca atcttcgacg tctaattttt
    10921 tattttcata gatactttcg tctatatctt taaactcttt taactcagtc attgtaaaac
    10981 tctaaaagtc tgtttatttc atattttgag ccgaaaaagc aaggcgttgt ttggtgaatt
    11041 ttttctaagt ttatctcaaa aagagacttg ttttctccat ttgtagtagc gccgccggct
    11101 ctttcatata tgaaagcaaa aggcaaaact tcaaaagtaa ctctaagctt tccgtttggc
    11161 gcgtcagttg tagccggata actaaaaagt ccgccgcctt taagtagaat ttgatgtaaa
    11221 tcactaacca tggcaccact atatctaagg cgataaccct catcaaatag agtttttata
    11281 aagtctctat gagccccgct ccagcctttt tgagtaccgc cagtcgcgtt tagtttacct
    11341 ttttctttta gacttagatc ttttataaat ttaaagcttc catctctatc taaacggtaa
    11401 agttttggag tatcttcgca cactaccatt tcaagtctag gtccataaat gcagtagatc
    11461 gccgctacta aatttgaggg ttttaactcg tttttatata caccgaaaat acttccgacg
    11521 gcgaaattta catcgaccaa actacttccg tcaagcggat cataagcgat gataaactcg
    11581 ccgtctttat ggatgtcgag cgcgtcttct ttttcctcgc ttacaagtga tcttacgctt
    11641 gaaactccta taaactcttg tgtgatgatg ttgtcgcttt tgacatcaag ttttaactga
    11701 gtgtcgcctg tggagtttgc atgatccgtg tagccaaggt cggcgtattt taactcttcg
    11761 cttattttaa ctgcgatttt ttctatagtt tttataattt cttgcatttt ataccctttt
    11821 tgcattatta tctatccatt ttatgatatt ttctatatcg tcaagtccaa atttaggctt
    11881 attcccatta gcaaaaccgt ctaaatttgt agcgtaagca tcactaaatg acttatatct
    11941 atcatcaacc tcatccctaa atacgcttat gcgaggcaat gggataaact taagcccctc
    12001 gactataaga taatcaaact cgccaaaata gcttataagc ttctttaggt cattctcaca
    12061 ctctgttttg ctaggcgaga attcctctgt tttgttgtcg tgagcctctg agcctacgcg
    12121 ctcatctccc ccaaaaagtc cgctttgcaa aagcacggta gtgcgttttg gacttactac
    12181 tgcaacgtct gcgccaagcg aactaaaaag ataactatct ttgccctctt tgtcaaattt
    12241 agacttatcg cctggatcat gctttgtgat agctactttg tagccctgtt ctatgagctt
    12301 gcttgctatc tttgcgatga gcgtagtttt accgcttccg cttctgccag aaactgccac
    12361 agctaaacgt tttataagat atccttgtta aattttggga tatattttag ctaaataatc
    12421 ataaaaaatg gtttattgta taaaaaagtg tataaaattg catataaaac attttttgga
    12481 gtttttaaaa ttttaatatg ataaatttat ttattataat tttagtataa aaaataaatt
    12541 ccaattccga ctataacaat tacaaataaa tcaaataata tataaaatgg aacgaatttg
    12601 aataaaaagt aaaaaataaa acagatacca ctaaaaacta taactgaaat ataaaaagct
    12661 aaactgatca aactaaataa tattttaaaa agattttgtt gaatttcagc attaagttgt
    12721 tcagtctttt gttggcactt ttgcgcttct ttttgattga gttgaaaata atattcttta
    12781 tttttttctt ctagctcaat ttttctaata a
//
LOCUS       DAPPKW010000054        12647 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.054, whole genome shotgun sequence.
ACCESSION   DAPPKW010000054 DAPPKW010000000
VERSION     DAPPKW010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12647
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.054"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..1156)
                     /locus_tag="RPW04_001311"
     CDS             complement(<1..1156)
                     /locus_tag="RPW04_001311"
                     /inference="COORDINATES: protein motif:HMM:NF019310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDX6295401.1"
                     /translation="MPNKFSNPLKALKYRNFRLYWFGMMISQTGTWMQNIAQPWLALE
                     VTNNATLVGIVAAVQFLPLLVFSLFSGALLDKIDKKLILKITQTGLCLTSLIFALSVV
                     FGFASYPIILFLAFLTGLCNCLDSPCRQSFLYELIDDKGDIPNAVALNSMSVNIARIM
                     GPFFAGIVMTKFGLAACFFLNSVSFIAIFISLFFIKHNPSKTNKRKENILKSIFSGFH
                     YIKKREILISPLIVVLIVGTFLPNYNVTISSLSKYSLSGAEDTFAYLMAFLGIGSFFG
                     ALWVAFTSKNISYKTVKIMPFIAATFLIAIGLSRDFTTAGVFLAMTGFSFMICVSTIN
                     SLLQLNSREDFRGRVMSVYILFFLGSTPIGAVISGVLASKFGAGMALVICG"
     gene            1277..2035
                     /gene="hisF"
                     /locus_tag="RPW04_001312"
     CDS             1277..2035
                     /gene="hisF"
                     /locus_tag="RPW04_001312"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDX6295402.1"
                     /translation="MDKFAKRIIPCLDVNNGRVVKGINFVGLRDAGDPVEVAKRYNDE
                     GADELCFLDITASSDGRDTIVHVVEEVARQLFIPLTVGGGIRKIDDISRLLNVGCDKV
                     SLNSAAIHNPNLISEAANKFGSQCVVVAIDVKKVDGSYHVFINGGRVDTKIDAYEWAK
                     KVYELGAGEILLTSMDSDGTKNGYDLEVTSKISNLVGIPVIASGGAGTMEHILEAFKF
                     GADAALAASIFHYKEIEISELKKYLLANDIGVRI"
     gene            2032..2571
                     /locus_tag="RPW04_001313"
     CDS             2032..2571
                     /locus_tag="RPW04_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDX6295403.1"
                     /translation="MIVCAGLNESFEFAVPIGVGIASSAINLTKLLTANKADEIIFVG
                     TCGLYKDGNLLDIYESKTAVNLEISSLLGLSYSPLFSSPIVQNLKYVSQETLITNSSN
                     FITTNRDIAQKFSELGLFMENMELYSVLETAKQFKIPARGILCATNFCEPNAHNEFIK
                     NHKKAKLNLEKYLKERDII"
     gene            2568..3632
                     /gene="rlmN"
                     /locus_tag="RPW04_001314"
     CDS             2568..3632
                     /gene="rlmN"
                     /locus_tag="RPW04_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HDX6295404.1"
                     /translation="MRNLLDLSQDELANLLSPKFRAKQIYEWVYKKNARSFDEMTNIS
                     KDVRENLKSEFYLDPLTCVRSETSKDGSIKYLFKLTDGKTIESVLLPMKEEISSEDGS
                     VERHARYTICVSSQVGCKMGCSFCLTAKGGFVRNLSAGEIVAQILWIKRENNIPYERR
                     VNVVYMGMGEPLDNLTNVSKAVSILKDNDGLAIGARRQTISTSGLASQIKKLGELDLG
                     VLLAISLHAVTDELRAKLMPINKAYNIAAVMDAVRAFPIDMRKRVMFEYLIMDKVNDN
                     LSDAKALVKLLHGIKAKVNLILFNPHEGSQYQRPSIENVDNFRTYLQSRGVTCTIRQS
                     KGLDISAACGQLKERSKVEM"
     gene            3629..3928
                     /locus_tag="RPW04_001315"
     CDS             3629..3928
                     /locus_tag="RPW04_001315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDX6295405.1"
                     /translation="MSSKREFLDFVLEGLDNISFKVMMGEFILYYKGKIIGGIYDDRL
                     LIKKTKSAEKIIKNIKYELPYPNAKEMILIENLEDKKYLMQLFKEIYQELYAKGI"
     gene            complement(4079..5038)
                     /locus_tag="RPW04_001316"
     CDS             complement(4079..5038)
                     /locus_tag="RPW04_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012660777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDX6295406.1"
                     /translation="MAYKKFKLGYFLGEKAYRIFLNLGYSMKEAQKLCDKGRLLVNDA
                     VCGKNDPVFGEAYFIDYECEPKGLKPIFECDEFGVFDKPSGVLSHPNGRNCEYSLCDE
                     IWSLWGKKACVAHRLDRETSGVIVVAKNANSALNLKKSFENRAVAKTYLAFVRGKFDG
                     NGLDKFHINDFEDFKDKLEFFDNIQGFVIDKNMDITKDYDDIKIRMEICPEGKRAVTV
                     VKLVEYYPKFDISLVECYPLTGRQHQIRLHLFHMKHRILGDPIYGLDKFNVEQILDGV
                     MSERDRVKNTGASRLMLHAKSVKFKFKDQVFEIRSEQDFNFNK"
     gene            5120..6448
                     /locus_tag="RPW04_001317"
     CDS             5120..6448
                     /locus_tag="RPW04_001317"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDX6295407.1"
                     /translation="MVDRYSRKIMSDKWSMQAKYDAWLKVELAAVKAWNKLDFIPDDD
                     CEKICKNAKFDIARIDEIEKTTKHDVIAFLTSVSESLGEESRFVHFGMTSSDCIDTAV
                     ALQIKDSLDLILEDISNLMNTLKTRAIEHKNTLMVGRSHGIHGEPITFGLVLAIWYDE
                     IKRAYELLEHAKKTISVGMISGAMGNFAHAPLELEELVCEYLGLSPAPASNQVIQRDR
                     YAQVVSALALLASSCEKIAVAIRHYQRTEVYEAEEYFSPGQKGSSAMPHKRNPVLSEN
                     VTGLCRMIRSYTIPAMENVALWHERDISHSSVERFILPDSFVTTDFMLNRLTNLISNL
                     VVYPENMMKNLNLTGGLVFSQRVLLELPKREVSREDAYKIVQRNAMKVWADLQEGKKA
                     IDENGHSLFLQNLLNDIDLRAKLNEKEIKECFDYSYYTKNVDKIFKRVFK"
     gene            6525..8900
                     /locus_tag="RPW04_001318"
     CDS             6525..8900
                     /locus_tag="RPW04_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDX6295408.1"
                     /translation="MKVIKRNGRTEELDISKIKKYTSEAVAGLDNVSLSELEVDAKIQ
                     FRDNITTEEIQQTLIKTAVDKIDIDRPNWTFVAARLFLYDLYHKTTGFSGYNSLKEYF
                     EKGEKNGRILLGLKEKYDLEDLNAYIKPERDLQFTYLGIKTLYDRYLIKDRNAKPIEL
                     PQHMFMAIAMFLAQNELDSQSWAKKFYDLISKFEVMLATPTLSNARTTRHQLSSCYVG
                     STPDNIEGIFDSYKEMALLSKFGGGIGWDWCKVRAMGGSIDGHKNAAGGIIPFLKVTN
                     DIAVAVDQLGTRKGAIAVYIEPWHMDVSDFLDLRKNSGEERRRAHELFPALWINDLFM
                     KRLSQNERWTLFDPADTPDLCDLYGDEFEKRYIEYEKDPHIAKSSMLAKELWKKILTN
                     YFETGMPFLCFKDNANRANPNAHKGIIRSSNLCTEIFQNTEPNYYQTKVVFDDGSFKL
                     FDESEDITVDGGYTKKAKKITALDRLDNKDIFIVEKGIKEGKTAVCNLASINLSKINS
                     KEDIARVVPIAIRMLDNVIDLNFYPHAKVKHTNLASRSIGLGVMGEAQMLAEKGIIWG
                     SYEHLEFIDEVMENISYNAIYASSNLAVEKGAYPDFEGSNWSKGIFPIDMANKNAKAL
                     INRGGLFDQNSCDWEKLRAKVKEGGMRNGYLMAIAPTSSISILVGTTQTIEPVYKRKW
                     FEQNLSGMIPSVVPNLNTETWQFYTPAYELDQKLIIKAGAVRQKWIDQGQSLNIFMSL
                     DKASGRYLSEIYTLAWELGVKSTYYLRSESPDSSHLDNKPMDRSVECEGCQ"
     gene            9129..10598
                     /locus_tag="RPW04_001319"
     CDS             9129..10598
                     /locus_tag="RPW04_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDX6295409.1"
                     /translation="MDNLHEHKLKRGMNSRHLNMIAIGGAIGTGLFVASGNTIATAGP
                     GGALLAYALIGFMVYLLMQSLGEMATYMPVAGSFEEYSARFISPSFGFAIGWNYWFNC
                     AITVAAELVAAAIVMKFWFPDVPSTLWSALFLSVIIIINYFSSGVFGESEFWFALIKV
                     VTVLAFIILGLAMIFGIMNGHSGGFSNWTLVSDSGESAPFVNGWFGILAVFMVAGFSF
                     QGTELVAVAAGEAKNPEKSIPKAINAIFWRILLFYIFAIAIIGTLVPFTDPNLLRNDE
                     TDIAQSPFTMVFNRAGIAFAASVMNAVIFTAIFSAGNSWLYSSTRMLYALAHSGKAPK
                     IFGKTNKRGVPIYALIATAIIGAACFFTSFMGDGSAYSWLINASALAGFITWMGVAWA
                     HYKFRKAYVLQGNDPANLPFRAKWYPLGPTLALIMCAIVIIGQNFESFMQGKDMVSLL
                     TSYVGLYLFLGIWFVHKIMTKSKPIDPLKADLSRNHAHI"
     gene            complement(10646..11119)
                     /gene="ruvC"
                     /locus_tag="RPW04_001320"
     CDS             complement(10646..11119)
                     /gene="ruvC"
                     /locus_tag="RPW04_001320"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HDX6295410.1"
                     /translation="MKILGIDPGTRNCGYAVIEKTGNKKTLIEAGLIKIKQDSLQYQI
                     TQLCEGLDIIFKSHKIDAVAIEDIFYAHNPKTVLKLAQFRGALSLKILQIHGEFSEYT
                     PLQIKKAVTGKAKAAKEQVAFMVKKMLGINQEIKPLDVTDAIAIALTHSFNVRIS"
     gene            11294..12604
                     /gene="dnaA"
                     /locus_tag="RPW04_001321"
     CDS             11294..12604
                     /gene="dnaA"
                     /locus_tag="RPW04_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDX6295411.1"
                     /translation="MLADEVIELLGQEISKNEMENYISQIKFNEKSSNSENIIFTAPN
                     ELVAKFIQTRYANKIANIFEVKTGIKPVISITTQKNRVSIKAKDIDVKQIRTQSSLLN
                     PSYTFESFVVGDSNQFAYISSQQAAQNPGKVYNPLFIYGSTGLGKTHLLQSIGNYCLE
                     HGKTVICVTSEQFMSDFIRNVENRTMNKFKEKYRNCDILLIDDIQFFHKSEKTQEEFF
                     HTFNEIHAKKGQIVMTSDKPPKMLKGFEERLKSRFEWGLMADITPPELDTKIRIIKAK
                     CEFDGINLSSDIIEYIATNMGDNIREIESAIININAFANIMRQEITLEFAKNVIKDQI
                     KEKKDNISLENIISCVSHEMNIKPSDIKSKSRTKGIVEARRICIYLAKTLTPNSMPQL
                     ATHFGLKDHSAVSHNIKKINEIINNDGYFKARVEELKNKITSKE"
BASE COUNT         4506 a         2116 c         2302 g         3723 t
ORIGIN      
        1 atccacatat aacaagcgcc attccggctc caaatttact tgccaaaact cctgatataa
       61 cagctcctat cggtgtagag cccaggaaaa atagaatata cacgctcatc actctacctc
      121 tgaaatcttc tcttgagttt aactgcaaaa gcgaatttat agtagaaaca catatcataa
      181 aactaaatcc ggtcattgct aaaaataccc cggctgtagt aaaatccctg ctaagaccga
      241 ttgctattaa aaacgtagcg gctataaatg gcataatttt aacggtttta tagctgatat
      301 ttttacttgt aaacgctacc caaagtgcgc caaaaaacga tccgattcct aaaaaagcca
      361 taagataagc aaaagtatct tcggctccgc ttaagctata ttttgataaa gaagatattg
      421 tcacattata atttggcaaa aatgttccta ctataagaac gactatcaaa gggcttataa
      481 gaatttcacg tttttttatg tagtgaaatc ctgaaaatat cgattttaat atattttctt
      541 tgcgtttatt tgtttttgag ggattatgtt ttataaaaaa taaacttata aaaatcgcta
      601 taaatgagac tgaatttaga aaaaaacagg ccgctagtcc aaatttagtc ataactatac
      661 cggcaaaaaa aggacccatg atcctagcta tgtttacaga cattgagttt agtgcaaccg
      721 cattgggaat atctcctttg tcgtctatta attcatataa aaacgactgt ctgcaaggcg
      781 aatcaagaca attacaaaga cctgttaaaa atgctaaaaa tagtataata ggatacgatg
      841 caaaaccaaa aacaacacta agagcaaaga ttaaagatgt taaacaaagt cctgtttggg
      901 taatttttag tataagtttt ttatcaattt tatctaatag cgcacctgaa aatagcgaaa
      961 aaacaagaag cggcaaaaac tgtactgcgg ctactatacc aactaacgta gcgttatttg
     1021 taacttcaag cgccagccaa ggctgagcga tattttgcat ccaagttcct gtttgagata
     1081 tcatcatccc gaaccagtat agcctgaaat ttctgtattt taacgctttt agcggatttg
     1141 aaaatttatt tggcacagct tcttcttgag taatttatat ctattttatc aaaatatagg
     1201 ttaatagtga ttgaatgttc tatttaagta aattttctaa gcttttattg taaaatgatg
     1261 ataaaaaaga gtttttatgg ataaatttgc aaaacgtata attccttgtt tggatgtaaa
     1321 taatggacgc gtggtaaaag gtataaattt cgtaggactt cgcgacgcag gagatccggt
     1381 cgaagttgcc aaacgctaca acgacgaagg cgctgatgag ctttgttttt tagacatcac
     1441 tgcaagtagc gacggtagag atactatcgt acatgtagta gaagaagtag caaggcagct
     1501 ttttatacct ctaacagtcg gcggcggtat aagaaaaata gatgatatct caagactttt
     1561 aaacgtaggt tgcgataaag taagtctaaa ctccgcagcc attcacaatc caaatttgat
     1621 aagcgaagct gcaaataaat tcggctcaca atgcgtagtc gtagctatag acgtaaaaaa
     1681 agtggacggg agctatcacg tatttataaa cggcggtaga gtagatacta aaatcgacgc
     1741 ttatgaatgg gcaaaaaaag tttatgaact aggcgcagga gagatactgc taacttctat
     1801 ggatagcgac ggcacaaaaa acggctacga ccttgaagtc acatctaaaa tatcaaattt
     1861 agtcggcatc ccggtcatcg caagcggtgg tgccggaact atggagcata tcttagaagc
     1921 gtttaaattc ggcgctgacg ctgcgcttgc tgcaagtata tttcactata aagagataga
     1981 aatatcggag ctcaaaaaat accttttagc aaacgatatc ggagttagaa tttgatagtt
     2041 tgcgccggac ttaatgagag ttttgaattt gccgttccga taggtgtagg aatcgcaagc
     2101 tcagctataa atttaactaa attattaact gcaaataaag cagacgagat catttttgtg
     2161 ggaacttgcg gattatataa agatggaaat cttttagata tttatgagag taaaacagcc
     2221 gtaaatttag aaatttcgtc cttgcttgga ctttcatatt ctccactatt ttcttcgccg
     2281 attgtgcaaa atttgaaata tgtttcacaa gaaacattga taacaaactc atcaaatttt
     2341 ataacaacga atagagatat cgcacaaaaa tttagtgaac ttggactttt tatggaaaat
     2401 atggagctat actccgtctt agaaacggca aaacaattta aaattcctgc tcgcgggatt
     2461 ctatgcgcta caaacttttg tgaacctaac gcgcataatg aatttataaa aaaccataaa
     2521 aaagcaaagc taaatttaga aaaatatttg aaagaaagag acattatatg agaaatttat
     2581 tagatctatc tcaagatgaa ttagcaaatt tactatcacc gaaatttaga gctaaacaaa
     2641 tttatgagtg ggtttataag aaaaatgcaa gaagttttga tgagatgact aacatatcaa
     2701 aagatgttag agaaaatttg aaaagcgaat tttaccttga tccactaact tgcgttagga
     2761 gtgaaaccag caaggacgga agcataaagt atctatttaa actaacagat ggcaaaacta
     2821 tcgaaagtgt tttactacct atgaaagagg aaatttcaag cgaagatggc agcgtagaac
     2881 gtcacgcgcg ttatactatc tgtgttagtt cgcaagtcgg ctgtaagatg ggctgtagct
     2941 tttgcctaac ggctaaaggt ggatttgtta gaaatctcag cgccggagag atcgtagcac
     3001 aaattttatg gataaaaaga gaaaataata taccttacga acgcagagta aatgtcgtat
     3061 atatgggtat gggcgaaccg cttgataatc ttactaacgt tagtaaagca gttagcattc
     3121 taaaagacaa cgacggactt gctatcggcg ctagacgtca gactataagt actagcggac
     3181 ttgcgtctca gataaaaaaa ctaggtgagc ttgaccttgg agtgcttcta gctatatcgc
     3241 ttcacgccgt aacagatgag cttcgcgcaa aacttatgcc gataaacaag gcttataaca
     3301 tagctgccgt tatggacgca gtgagagctt ttcccatcga tatgagaaaa agagttatgt
     3361 ttgaatatct tataatggat aaagtcaatg acaatctaag cgacgcaaaa gcacttgtca
     3421 aacttctaca cggtataaaa gcaaaagtaa atttaatact tttcaatccg catgaaggaa
     3481 gccagtacca aagaccgagc atagaaaacg tggacaattt cagaacttat ctgcaaagtc
     3541 gcggcgtaac ttgcactatt cgtcaaagca aaggacttga tataagtgct gcttgcggtc
     3601 agctaaaaga gagaagtaag gttgaaatgt gagttcaaaa agagaatttt tagactttgt
     3661 tttagaaggt ttagacaaca tcagctttaa agtgatgatg ggcgaattca tactatatta
     3721 taaaggcaaa atcataggcg gaatatatga tgatagacta ctaataaaaa agacgaaatc
     3781 cgccgaaaaa atcataaaaa atataaaata cgaactacca tatcctaatg caaaagagat
     3841 gattttgatc gagaacttag aagataaaaa atatttaatg caacttttta aagaaattta
     3901 tcaagaatta tacgccaaag gaatataaaa aatgaatcta ctagatatag ttcaaatctg
     3961 ttttatcgca attgtagtga taataggtct tagcggaatt ttattcgtca taaaaaatga
     4021 aaagaaataa aaatttataa agcgtatttt aagatcactg ctatattaaa tttcaaaatt
     4081 atttattaaa attaaaatct tgttctgatc ttatctcaaa tacttgatct ttaaatttaa
     4141 atttaactga ttttgcgtgg agcattagcc ttgatgctcc agtatttttt accctatcgc
     4201 gctcgctcat cacaccatct aaaatttgct ctacattaaa tttatctaag ccgtaaatcg
     4261 gatcacccaa aattctatgt ttcatatgaa acaaatgtaa gcgaatctga tgttgtcttc
     4321 cggtgagtgg ataacactca accaagctga tatcaaattt aggataatac tctacgagtt
     4381 ttactacggt cacagctctc tttccttccg gacaaatttc cattctgatt tttatgtcat
     4441 cataatcttt tgttatatcc atatttttat cgataacaaa accttggata ttatcaaaaa
     4501 attctagctt atctttaaaa tcctcaaagt catttatatg aaatttatca agtccattac
     4561 cgtcaaattt gcctctcaca aaagccagat aagtttttgc tactgcccta ttttcaaaag
     4621 atttttttaa atttaacgcg gaattcgcat ttttagccac aacgataact ccgcttgttt
     4681 ctcggtcaag tctatgggca acacaagctt ttttgcccca caaagaccaa atttcatcac
     4741 ataaactata ctcgcaattt ctaccatttg gatgagataa aactccgctt ggtttatcaa
     4801 atacaccaaa ctcgtcacat tcaaatatag gttttaatcc ctttggctca cactcgtaat
     4861 ctataaaata agcttccccg aaaaccggat cgtttttacc gcaaacagcg tcatttacga
     4921 gcaatctacc tttgtcacaa agcttttgag cttctttcat actataacct aaatttaaaa
     4981 aaatacggta agctttttcg cccaaaaaat atcctaattt aaacttttta taagccattt
     5041 ctaaccaaca tttcagcctt atttttgtat aatttcaact taaaaattat acaaaattta
     5101 ttataaaaaa gggtataaag tggtagatag atactccaga aaaattatga gcgataaatg
     5161 gagcatgcaa gcaaaatatg atgcttggct aaaagtagaa ctagcagctg taaaagcatg
     5221 gaataaacta gactttatcc cagatgatga ctgtgaaaaa atatgcaaaa acgctaaatt
     5281 cgatatagct cgcatagacg agatagaaaa aactacgaaa cacgacgtta tagccttttt
     5341 aactagcgta agcgaaagct taggagaaga gagtcgtttc gtacattttg gtatgacgag
     5401 cagtgactgt atagatactg ctgtcgcact tcagataaaa gatagtttag atctcatact
     5461 tgaagatata tcaaatttaa tgaatacttt aaagactcgc gcgatagaac ataaaaatac
     5521 gcttatggta ggtcgcagcc acggaattca cggtgagccg ataacatttg gtttagtgct
     5581 tgctatatgg tatgacgaga taaaaagagc ttacgaactt ctagaacatg ctaaaaagac
     5641 gataagcgta ggtatgataa gcggagctat gggaaacttc gctcacgctc cgcttgagct
     5701 tgaagagctt gtttgtgagt atcttggtct aagtcctgct ccagcgtcaa atcaagtcat
     5761 acaaagagac agatacgctc aagttgtaag tgcgcttgcc ctgctcgcta gtagttgcga
     5821 aaaaatagcg gtcgcgataa ggcactatca aagaacagaa gtttatgaag ccgaagagta
     5881 ctttagtccc ggacaaaaag gctcaagcgc tatgcctcat aaaagaaatc cagtcttaag
     5941 cgaaaacgtg accggtcttt gtagaatgat ccgctcatac actatcccgg ctatggaaaa
     6001 cgtagcttta tggcacgaaa gagatatcag ccatagctca gtcgagagat ttatacttcc
     6061 tgatagtttc gtaacgactg attttatgct aaatcgtctt acgaatttaa tctcaaattt
     6121 agtagtatat ccggaaaata tgatgaaaaa tctaaatcta accggcggac ttgtattttc
     6181 tcaacgcgtc ttgcttgaac ttccaaaacg agaagttagc cgcgaagatg cttataaaat
     6241 cgtccaaaga aatgctatga aagtatgggc tgatctgcaa gaaggcaaaa aagccataga
     6301 cgaaaacgga cacagtctat ttttacaaaa tttactaaac gacatcgatc taagagcaaa
     6361 attaaacgaa aaagagataa aagagtgctt tgactatagc tactatacaa agaacgtaga
     6421 taaaatcttt aaaagagtat ttaaatagta ctaaataata cagctaaatt tagtcggcaa
     6481 atttagcttt tttgataatc aaatttaaaa ggtcaaacat ataaatgaaa gtcataaaac
     6541 gtaacggaag aacagaagaa ttagatattt caaagattaa aaaatacaca agcgaagcag
     6601 tagcaggctt agacaacgta agtctcagcg agcttgaagt agacgcgaaa attcagtttc
     6661 gcgacaatat cactaccgaa gaaattcaac aaactctcat aaaaaccgca gttgataaga
     6721 tagatataga tcgcccgaac tggacattcg tagcagcaag actattttta tacgatttat
     6781 atcacaaaac aaccggattt agcggataca actcgctcaa agagtatttt gaaaaaggtg
     6841 aaaaaaacgg acgcatactt cttggtctaa aagaaaaata cgatcttgaa gatctaaacg
     6901 catatataaa gcctgaacgt gatttgcaat ttacctatct tggtataaaa acgctttatg
     6961 atagatatct tataaaagat agaaatgcaa aacctatcga gctacctcaa catatgttta
     7021 tggcaatcgc tatgttttta gctcaaaatg agcttgactc tcaaagctgg gcaaagaaat
     7081 tttacgatct gataagtaaa tttgaagtga tgcttgcgac tcctacttta agcaacgcta
     7141 gaaccactcg acatcagctc tcaagctgct atgtcggaag tactcctgat aatatagaag
     7201 gaattttcga tagctataaa gagatggcgt tgctttctaa attcggcggc ggtatcggct
     7261 gggactggtg taaagtgcgc gcgatgggcg gaagtataga cggacataaa aacgctgcgg
     7321 gcggcataat tccgttttta aaagttacaa acgatatagc agtcgcagtc gatcagctag
     7381 gaactagaaa aggcgccatc gcggtttata tcgagccttg gcatatggac gtaagtgact
     7441 ttttagatct acgtaaaaac tcgggcgaag agcgcagacg tgctcatgag ctatttcctg
     7501 ctttatggat aaatgatctt tttatgaaaa gacttagcca aaatgagaga tggactctat
     7561 ttgatccggc tgatactcca gatctttgcg atttatacgg cgacgagttt gaaaaacgct
     7621 atatcgagta tgaaaaagat ccacatatag ctaagagtag tatgctagca aaagagcttt
     7681 ggaaaaagat acttacaaac tattttgaga ccggaatgcc gtttttatgc tttaaagata
     7741 atgcaaacag agccaaccca aatgctcata aaggtatcat aagaagctca aatttatgca
     7801 ccgagatatt tcaaaataca gagccgaatt actaccaaac aaaagtcgtt tttgatgatg
     7861 gaagttttaa gctatttgat gagagtgaag atataaccgt agatggtgga tatactaaaa
     7921 aagcgaaaaa aataaccgct cttgatagac ttgataataa agatatattt atagtagaaa
     7981 aaggtataaa agagggaaaa actgccgttt gtaacctagc aagtataaac ttaagcaaga
     8041 taaactcaaa agaagatatc gcaagagtcg tgcctatcgc tataagaatg cttgataatg
     8101 ttatagatct aaatttctac cctcacgcta aagtcaaaca tacgaattta gccagtcgtt
     8161 caatcgggct tggagttatg ggtgaggcgc agatgttagc cgaaaaaggt attatttggg
     8221 gaagttatga acatcttgag tttatagatg aagtaatgga aaacattagt tataacgcca
     8281 tctatgcttc atctaattta gctgttgaaa aaggagctta tcctgatttt gaaggttcaa
     8341 actggtcaaa aggtatattt cctattgata tggcaaataa aaacgcaaaa gctcttataa
     8401 acagaggcgg actatttgat caaaatagct gcgactggga aaaactaaga gcgaaagtaa
     8461 aagaaggcgg aatgagaaac ggttatctta tggcaatcgc tccgacttca agtataagca
     8521 ttttagtagg aactactcaa acaatcgaac ctgtttataa acgtaaatgg tttgaacaaa
     8581 atttatccgg aatgatacct tcggtagtac caaatttaaa taccgaaact tggcaatttt
     8641 atacaccagc ttacgaactc gatcaaaagc ttatcataaa agccggagcc gtacgtcaaa
     8701 aatggataga tcaaggtcaa agcttaaata tatttatgag cttagacaaa gctagcggaa
     8761 gatatctaag cgaaatttac actctagctt gggaattagg cgtaaaatct acttactatt
     8821 taagaagtga aagtccggat tctagtcatc ttgataacaa acctatggat agaagcgtag
     8881 agtgtgaggg ttgtcagtaa gatattttca aactcaaatt taaactaaaa aacttcttaa
     8941 acctactttt ttaattggcg tcagacaaaa ttttaaatct ctgacgtcga aataaaccta
     9001 aatttacaaa ataacccatt gaataataaa ttatatttta aatttaaaat tacttttaat
     9061 gaaaaataat ttttcagtca attttcgata taattgaaag ttttttaaaa tcaatcaaag
     9121 gagttcttgt ggataatcta cacgaacata aactaaagcg tggtatgaac tcacgccatt
     9181 taaatatgat agcaatcggc ggagctatag gcactggatt atttgtagct agcggaaata
     9241 cgatcgctac ggccggtcct ggaggagcac ttttagctta cgcattaata ggttttatgg
     9301 tatatctgct tatgcaaagc cttggagaaa tggctacgta tatgccagtc gccggaagct
     9361 ttgaagagta tagcgctaga tttatcagtc catcttttgg atttgccatc ggttggaatt
     9421 actggtttaa ttgcgctata acagtcgcgg ccgagcttgt cgcagcggcg atagttatga
     9481 aattttggtt tccggatgtt ccatctactc tctggtctgc tctatttttg agcgttatta
     9541 ttattataaa ttattttagt tcgggtgttt ttggagagag tgagttttgg tttgctctta
     9601 taaaagttgt gactgttttg gcttttataa tccttggttt agcaatgata tttggtatta
     9661 tgaacggtca ttctggcggc ttttcaaact ggactttagt gagtgatagc ggagagtccg
     9721 caccatttgt aaatggctgg ttcgggatac ttgccgtgtt tatggtggct ggttttagct
     9781 ttcaaggaac cgaattagtt gcagtggctg caggagaggc aaaaaatcct gaaaaaagta
     9841 taccaaaagc gataaatgcg atattttggc gaattttact tttttacatt tttgcgatcg
     9901 cgataatagg aactttagtt ccgttcactg atccaaattt acttagaaac gatgaaacag
     9961 acatagctca aagtccattt actatggtat ttaatcgcgc cggtatagca tttgccgcta
    10021 gcgttatgaa tgcggttatt tttactgcta tttttagtgc cggaaactca tggttatact
    10081 ctagtacaag aatgctctac gccctagccc actcaggcaa agctccaaag atatttggta
    10141 aaacaaacaa aagaggtgtt cctatctacg ctcttatcgc tacggctatc atcggagcag
    10201 cttgtttttt cacatcgttt atgggggacg gctcagctta tagttggctt ataaatgctt
    10261 ctgcgcttgc cggatttatc acatggatgg gtgtagcatg ggcgcattat aaatttagaa
    10321 aagcttatgt tttacaaggc aatgatcctg caaatttacc gtttcgcgca aaatggtatc
    10381 ctcttgggcc tactcttgct cttattatgt gcgctatcgt aatcatagga caaaactttg
    10441 agtcatttat gcaaggcaaa gatatggtaa gcttacttac aagttatgta ggactttatc
    10501 tatttttagg aatttggttt gttcataaaa tcatgacaaa atcaaaaccg attgatcccc
    10561 taaaagcaga tcttagcaga aatcacgctc atatataaat ttaagagcaa atttaaaaaa
    10621 tatttagcgg agctttccgc taaatttaac taattctcac attaaaacta tgtgttaaag
    10681 cgatggctat agcatcagtc acatctaacg gctttatttc ttgattaatt ccaagcatct
    10741 tttttaccat aaaagcaacc tgctcttttg cagcctttgc cttgcctgta actgcttttt
    10801 tgatctgtaa cggagtgtat tcgctaaatt caccgtgaat ttgaagtatt ttaagactaa
    10861 gagcgcctct gaattgagca agctttaaaa ctgtttttgg attgtgtgca taaaatatat
    10921 cttctatggc tacggcgtct attttatgcg atttaaatat aatatctagc ccctcgcaaa
    10981 gctgagttat ttgatattgt aagctatctt gttttatttt tatcaaacct gcttctatta
    11041 acgttttttt atttcccgtt ttttcaatta cagcataacc acaatttcta gttccgggat
    11101 caattcctaa aattttcatc acacgccttt caatagttat tcacatcttt ttcactatgt
    11161 gaataagtga tataatttat taaataatat cataaattac catatattta aataaggtta
    11221 aaatcaatag ataagtcatt tttaattaaa ttttagataa aatagtaaat aattcgatgt
    11281 aaaaaggtaa gctttgctag cagatgaagt aatagagctt ttaggtcaag agatatctaa
    11341 aaatgagatg gaaaactaca tatctcaaat taaatttaat gaaaaatctt caaatagcga
    11401 aaatattatt tttacagccc caaatgaact tgtagctaaa tttatacaaa ctagatacgc
    11461 taacaaaata gcaaatatct ttgaagttaa aaccggaatt aaaccggtca taagcataac
    11521 aacacaaaaa aatagagtat caatcaaagc aaaagatata gatgtaaaac aaattcgcac
    11581 acaaagctca cttctaaatc ctagctatac atttgaaagt tttgtcgtgg gcgattcaaa
    11641 tcaatttgcc tatataagct cacagcaagc tgctcaaaat ccgggtaaag tttataaccc
    11701 actttttata tatggctcaa caggacttgg taaaactcac cttttacaat ccataggaaa
    11761 ttactgttta gaacacggaa aaacagtaat ttgcgtaact agtgaacaat ttatgagtga
    11821 ttttatcaga aatgtagaaa atagaactat gaataaattt aaagaaaaat atagaaattg
    11881 cgatatttta ctcatagatg atattcaatt ttttcataaa tctgaaaaaa ctcaagagga
    11941 attttttcat actttcaacg aaattcatgc aaaaaaaggt caaatcgtta tgacttctga
    12001 taaacctcca aaaatgttaa aaggttttga agagagatta aaaagtcgtt ttgaatgggg
    12061 acttatggct gatataacac cgcctgaact tgatacaaaa atacgaatta taaaagcaaa
    12121 atgcgaattt gacggtataa atttaagcag tgatataatc gaatatatag ctacaaatat
    12181 gggagataac attcgcgaga tagaaagtgc aattataaat ataaacgcgt ttgcaaacat
    12241 tatgcgacaa gaaattactt tagaatttgc taaaaatgtt ataaaagatc aaataaaaga
    12301 gaaaaaagat aacataagtc ttgaaaatat tataagctgt gtaagtcatg aaatgaacat
    12361 aaaaccaagt gatatcaaaa gcaaaagcag aacaaaaggt atagttgaag caagaagaat
    12421 ttgtatctat ttagcaaaaa cattaactcc aaactcaatg cctcaacttg caactcattt
    12481 tggactaaaa gatcacagcg cagtaagtca taatataaaa aaaataaatg aaataataaa
    12541 taacgatgga tactttaaag caagagttga agaactaaaa aataagataa catcaaagga
    12601 ataatgtgaa aagaagtgaa aaagtaaaac tttattttca atatata
//
LOCUS       DAPPKW010000055        12353 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.055, whole genome shotgun sequence.
ACCESSION   DAPPKW010000055 DAPPKW010000000
VERSION     DAPPKW010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12353)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12353)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12353
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.055"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            117..554
                     /locus_tag="RPW04_001322"
     CDS             117..554
                     /locus_tag="RPW04_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE family protein"
                     /protein_id="HDX6295412.1"
                     /translation="MKLAGIFMAIFIASSSIFAYDGNLKKDINVVIFLTKKDNFQSAI
                     LQANGIQKSLSSSEKGDIELVMGGSSVEIFAQNDEKSNKIKNDIAKLVDLPNVRVVAC
                     RGAMKRANVSQDSLIKGVNTVKAAPREVVDRQLDGYAILILKN"
     gene            940..1299
                     /locus_tag="RPW04_001323"
     CDS             940..1299
                     /locus_tag="RPW04_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HDX6295413.1"
                     /translation="MSSNLVLSFYLYIFIVCLLIGMFFLTKKIGPSVQNSSKNKSYES
                     GIVNFYGGINSSINVKYYLVAIVFVIFDIEAVFMYPWAVSLRDLGRYGLLVMFVFMAI
                     LLVGLFYIYKKKILKWE"
     gene            1290..1796
                     /locus_tag="RPW04_001324"
     CDS             1290..1796
                     /locus_tag="RPW04_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HDX6295414.1"
                     /translation="MGIENLVQNDVVLTRLDALFNWGRKNSLWPMIFGTACCAIEFMS
                     AVSSKHDLSRFGAEVMRFSPRQADLMIIAGTISFKQAPILKEIYDQMCEPKWVVSMGA
                     CACSGGFYDNYTTLQGIDQIIPVDVYISGCPPRPEAIIDAILAIQDKISNESIKDRHK
                     DYKGLLDA"
     gene            1789..3474
                     /locus_tag="RPW04_001325"
     CDS             1789..3474
                     /locus_tag="RPW04_001325"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HDX6295415.1"
                     /translation="MLEKFSSKFNVLKHSTTNGLLSVQINPNDIYEAVLFVRDNIGFE
                     ILADIVCVDNLYIDKEKRFSLYYIFRKISSENLCIYIDIDINQSVKSVESIYKSANWG
                     ERECFDQFGVKFENHPNLKRILNHKDFQGYPLRKDYPITKYQVLYESDDLVGEMKNEM
                     QRAGLASEENDEFKTKYTFLNIGPSHPATHGTIRNFVALDGEKIISCVTEIGYLHRGF
                     EKACENHSYAQIIPYTDRLNYCSAMLNNVGYAKAVEEALGLNLPDRGIFMRVILGELA
                     RIIDHEVCLGAMFVDMGGLTNYWYLYNPRERIYNFLSKLTGARFTNSFARIGGMANDF
                     YDGWKEELLAHLKDVEKGVDDTMILIEKNRIFLDRVQNICKINANDALSYGFSGPNLR
                     ASGVSFDLRKDKPYYYYDSFDFSVPVGSEGDIYDRMFVRFFEMRESISIIRQAIKLIP
                     EGKISVDDKDVFLPSKDQVYSNIESLINHFKLIFDGIKLPNGHFYSASEGANGELGFF
                     IFSNSEPNPYRVKLRPPCFYALNAFSSMVQGSLIADSILNLGSLNIIAGELDR"
     gene            3471..3962
                     /locus_tag="RPW04_001326"
     CDS             3471..3962
                     /locus_tag="RPW04_001326"
                     /inference="COORDINATES: protein motif:HMM:NF013426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HDX6295416.1"
                     /translation="MKFEFTHEQLSALNELKKKVDDDRALVLPSLWMVQRAQGFIDAK
                     DVLYLEKTLGIRSMFYAEAIGFYSMFNQKSKGKFELKFCKTITCKLRGSDELIKFTQD
                     ILGIKMGETSSDGLFSLGETECLGYCEKAPCMLCNLEQIDSLDENSITNLIEKIRKEN
                     ASS"
     gene            3949..5169
                     /gene="nuoF"
                     /locus_tag="RPW04_001327"
     CDS             3949..5169
                     /gene="nuoF"
                     /locus_tag="RPW04_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HDX6295417.1"
                     /translation="MQVVSSRFSIKNGYKIDVAKANGAYLNLENILKMDRNSIVEAVD
                     KSGLRGKGGGGGSCGTKWKNMLAWESDKRYLVVNGDESEPGTCKDKYILNLDPHLLIE
                     GIIISSYALGAKRAYVYIRGEYEREFITLTNAIKEAANELGDLEIIVYKGAGAYICGE
                     KTALLESIEGKRGHPRLKPHNKAEPDFLFGCACVVNNVETIASIPFIVKNGWEAYRSV
                     GTEKSPGTLLFAVSGCVNTPCVKEMPFGTKMIDFINDFGGGVWKNRELKAVIPGGSSA
                     AVLTKDEVLKATLDYESLKEFKSALGTGGMMVFDDTISMPEVLLNLLEFYTEESCGQC
                     TPCREGCGWALRVVKKIVEGEGSLRDLDTLKDISYMLDGKTICVFAPAVKDVIMGFIT
                     KFENEFVALCKETK"
     gene            5166..6563
                     /locus_tag="RPW04_001328"
     CDS             5166..6563
                     /locus_tag="RPW04_001328"
                     /inference="COORDINATES: protein
                     motif:HMM:NF022058.1,HMM:NF024900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HDX6295418.1"
                     /translation="MMVNIVVDGETFSVDKNGNLITELKKHNIEIPHFCYHEALGVSG
                     NCRMCLIEVVGQKRPQIACNTPISEGMEIKINSELTRKVQKGILELEFINHPIDCPVC
                     DQAGECSLQEYYMCYDKGDSRVSLAQKVRKPKKEDFGSNVIHDAERCVLCRRCVRFTE
                     ICTKTYELGVGNRGEHSEIILFNDEKINNPYAGNIVDVCPVGAMTSADFRFKKRVWHL
                     KSSPSICQGCERGCAIWVDSSQDKYEYNKIYRFRPRVDNSVNGHFICDFGRYSYKNEQ
                     IIVQENSNELILNLKNDLDKTSGKFDILITSSLSLEEMFCVINFAKEYNARIYGWDNF
                     RDESFCDSEGLMLRYPNKTANKQGLDYFYNKSYISKDISDIRDRVIVFHLGGELDFLN
                     LKDKNITFIGSCNSADIVCASAYHRDGHSVNVDNKLRFSKAAFLNLSPSIEQIIQTLS
                     RNSYKFDKDILKAFE"
     gene            6560..7837
                     /locus_tag="RPW04_001329"
     CDS             6560..7837
                     /locus_tag="RPW04_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HDX6295419.1"
                     /translation="MNELFLTIFRIVFILSFILLLIPILVLLERKISAFIQDRPGPNR
                     ANIAGIRLGGIIQALADALKLAIKEDFTPSSIRSKFLFTIAPMILFLMSTLTIAVIPF
                     SDYFTIDGVKHLMQGIPFDGGMLWYLGVASLSIYGIMLAGYASNNKYSLLGSLRAASG
                     AISYEIPLGLAVVSMILTYDSINLNDFVLQQQGSFLGLPSWGIFIQPLAAIIFIICAF
                     AETNRAPFDLAEGESEIVAGYHLEYSAMSFAMFFMAEYIAMTAMSALIITIFFGGYSL
                     PYLSTADLVNNYKIVLLSIVFIITILGFIFVLWINKNNVTRYKVTNDFRKKENKFYKI
                     CTFIVVAITDVICFYLYFTGLQSLGQEILVTILYLTIFALKTFVMLFVFIWVRWTVPR
                     FRYDQIQRLGWEKLMPLAIFNIIITAMVVVYGN"
     gene            7827..8324
                     /locus_tag="RPW04_001330"
     CDS             7827..8324
                     /locus_tag="RPW04_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010402338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit I"
                     /protein_id="HDX6295420.1"
                     /translation="MAIKTKTIRRKKIPFLQRIYLPFIFAGMARTFRHFFRNLKDSSN
                     IDFLGYPEQKPTDITNRYRGLHRLTKNEKGDLKCVACDMCATACPANCIFITATEIEG
                     SKEKAPSKFTIDLLECVFCGLCVEACPKDAIRMDTGIFTKVGNTRESFLADIKTLSQR
                     EEGSF"
     gene            8324..8818
                     /locus_tag="RPW04_001331"
     CDS             8324..8818
                     /locus_tag="RPW04_001331"
                     /inference="COORDINATES: protein motif:HMM:NF012709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HDX6295421.1"
                     /translation="MELFLFINFSLFAILGSLGLILFKAPIHGALSLIVTLVSIAGLY
                     LLLFAKTLFLIQIVVYAGAIMVLSVFVMMFFNIKSDTLFVKLKPKSFFVIIPPTVIFA
                     ILLDEIWKLPSDFGIAPLDFGEIKPLGFYLFTNWGLSFEAISLLLTAALIGVVAILKG
                     KNNA"
     gene            8811..9119
                     /gene="nuoK"
                     /locus_tag="RPW04_001332"
     CDS             8811..9119
                     /gene="nuoK"
                     /locus_tag="RPW04_001332"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HDX6295422.1"
                     /translation="MLDFYILVALILFFIGVLGVILRKNIFTIFMSVELMLNATALIF
                     ATFARQSLNLDGQVIVMLIIAIAAAEASFGLALIVLLYKKKQSLNIDIFDELKDRDVS
                     "
     gene            9109..10920
                     /gene="nuoL"
                     /locus_tag="RPW04_001333"
     CDS             9109..10920
                     /gene="nuoL"
                     /locus_tag="RPW04_001333"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF005141.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HDX6295423.1"
                     /translation="MLVSIVVLAPIIGSILLGLTYLARNTLKISQLGFAFLGMAAPIT
                     SFVCMTILFLNSQIEPINLNMFGWIEAGIFKIDVGFYLDHLSLLMGLFVTFLGMLIHL
                     YSIGYMDKDIGFGKFFCYMNLFLGSMLILVLANNPVLMFVGWEGVGACSYLLISFYFS
                     SKDNVKAGNKAFILNRIGDFGFVIGLVSLYLATSPYGFNYEILAKSAPLIPSNLAIFI
                     AFCFICGALAKSAQIPLYTWLPDAMAGPTPISALIHAATMVTAGVYMVVRFGFLYEHL
                     NFVLEILAIIGVASALFAAIIAVKATDIKKILAYSTMSQLGYMFAGLSFSSQAALYHL
                     FTHGFFKALLFLGAGSVIIALHHEQNIFKMGSLHKNKVLFYPMLFGSLAISGVFPFAG
                     FFSKDALILGAFLSGHYFISGVLLFTAGLTSYYIFRLFFLVFYSQNEAPKQHKLPFTM
                     SFVNVILAIFSLIGGGMAMFLSLEHVSLSVEIIAGVVSLFISFLGIFIAYKKFYNYKN
                     CEEQTCCFENLVINKFYVDEIYDFVFVRSFASLSKFVREVLDAKIFYPFVLGTARMFK
                     FSGFVYSKFTQNGLAGSYAFYMLAFICIFILYIKVSL"
     gene            10917..>12353
                     /locus_tag="RPW04_001334"
     CDS             10917..>12353
                     /locus_tag="RPW04_001334"
                     /inference="COORDINATES: protein motif:HMM:TIGR01972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HDX6295424.1"
                     /translation="MTGFSHILSLIIFLPFIVGVLIALFFNDKAGKLTAFVVSIVVAV
                     LGLVLFFKFDPNAGMQFVDSISLVPKYGISYLVGVDGINLYILLIITSAFPPLFFILK
                     NRKKGYWANMLFMQSGFLSVVSSLDLVYFYAGWEMMLIPIFIMVGIYGKDSGRAGALM
                     DMMYYAIFGSMIMLGAIIYIGAAHYYEFGFFSFRLEDLIKVSLNSDLQTVLFFCFMLA
                     FVIKLPLFPFHLWMSNAYTKSLTTATFMLSVIASKVAVFAILRFVLPLFPVSFVNYST
                     WFISLGLFSMLYFGIAAIKVKDFKTLLAYASASHLGLIIAGVFALDVEAMTGSMYQVV
                     AHAITSGIMFLLVGMISEQLGTRKISKLGGLAIKAPVFATIFAIAMISSVGLPATVGF
                     VGELLIIFGLFKANLIYGIFGTTSIVIGAIYMFIVYRKAILQNTNELTAKFKDLRKRE
                     ILAFLVAVAMIFIMGIYPKPFIKQIEPTM"
BASE COUNT         3843 a         1682 c         2478 g         4350 t
ORIGIN      
        1 tttaaaatta tttaatacaa atttatgtaa ttttatatta ttggtatgat ttttaagttt
       61 aatttttgga ttactagctt ataattatgc attttattac aaaaaaggag cttggaatga
      121 agcttgctgg tatatttatg gcgattttta ttgcttcatc tagcatattt gcatatgatg
      181 gaaatttgaa aaaagatata aatgttgtga tctttttaac aaaaaaagat aattttcaaa
      241 gcgcaatact ccaagccaat ggaattcaga aaagtttaag tagtagcgaa aaaggggata
      301 ttgagctagt tatgggtgga agttcggtgg aaatttttgc acaaaatgat gagaaatcaa
      361 acaaaataaa aaatgatatt gcaaagctcg tagatctccc aaatgttaga gttgtagctt
      421 gtagaggtgc aatgaaaaga gctaatgtaa gccaagatag cttgatcaaa ggcgtaaata
      481 cagtaaaagc agctcctagg gaagttgtag atagacaact tgatggttat gctattttaa
      541 tccttaaaaa ttaggatttt attgattcgc tttttaaatt tgaataattt gatggttgta
      601 tattaaatta tttaaattta aatactattt ttactccaaa tatttgcata ttaaattata
      661 tagtttatat tattattgta atattttatt ttaagataat ttcaataaaa tctatcaaac
      721 atagataaat taatactata ttatacctat tatctattat tttatacttc aatatattga
      781 aatttaatta attatcactt ataattttaa atatacaaac taatttattt acgaaatcta
      841 atgttatgtg aaaaattggt aatatttcac agtaaatatt taattatatc taaaactgct
      901 tgagttctgt tttgttgcag ttttgatttg aggatagtca tgagcagcaa ccttgttttg
      961 agtttttacc tatatatttt tatagtctgt ttgcttatag gaatgttttt tctgacaaaa
     1021 aagataggtc ctagtgtgca aaattcgtcc aaaaataaaa gttatgagag cggtatagta
     1081 aatttctacg gtggtattaa ttctagtata aatgttaaat attacttagt tgctatagtg
     1141 tttgtaattt ttgatataga agctgtattt atgtatccat gggcggttag tttgcgtgat
     1201 cttgggagat atgggctttt agtgatgttt gtttttatgg caattttgct agtcgggtta
     1261 ttttatatat ataaaaagaa gattttaaaa tgggaataga aaatttagtt caaaacgatg
     1321 ttgttttaac aaggcttgat gcgctgttta attggggtag aaaaaactct ctttggccta
     1381 tgatatttgg aacggcctgt tgtgcgatag aatttatgag tgctgtatct tcaaagcacg
     1441 atctttcaag gtttggagca gaggttatga gattttcgcc tagacaagca gatcttatga
     1501 taatagctgg aaccatatct tttaaacaag ctcctattct aaaagagatt tatgatcaga
     1561 tgtgcgaacc aaaatgggtc gttagtatgg gtgcttgcgc ttgtagtggt ggtttttacg
     1621 ataattatac gacattgcaa ggtatagacc agataattcc tgtcgatgtt tatataagcg
     1681 gttgtccccc gcgtccagaa gctattatcg atgcgatttt ggcgatacaa gataaaattt
     1741 ctaacgagtc tataaaagac aggcataaag actataaagg attattagat gcttgagaaa
     1801 ttttcttcta aattcaatgt tttgaagcac tctactacaa acggtctttt aagtgtgcaa
     1861 ataaatccaa atgatatcta tgaggctgtt ttgtttgtta gagataatat cggatttgaa
     1921 atattagctg atatagtttg cgtggataat ttatatattg ataaggaaaa gcgttttagt
     1981 ctttattata ttttcagaaa aataagctcg gaaaatttat gtatttatat agatatagat
     2041 ataaatcaga gcgtgaaaag cgttgaaagt atttataaga gtgccaactg gggcgagcga
     2101 gagtgctttg atcagtttgg agttaaattt gaaaaccatc caaatttgaa aagaatactc
     2161 aaccataaag attttcaagg ctatcctctt agaaaagact accctataac aaagtatcaa
     2221 gttctttatg aaagcgatga tttagtcggc gagatgaaaa atgagatgca aagagccggt
     2281 ttggctagtg aagaaaatga tgagtttaag acaaaatata catttttgaa tattggaccg
     2341 tctcatccag ccactcacgg tacaataaga aatttcgttg cattagacgg agagaaaatc
     2401 atatcttgcg taactgagat aggatatctg catagaggct ttgaaaaagc ctgtgaaaac
     2461 catagctatg ctcagatcat tccatataca gataggttaa attactgttc tgctatgtta
     2521 aataacgtag gatatgcaaa agcagttgaa gaagctcttg gtttaaattt accagataga
     2581 ggaattttta tgagagttat tttgggcgaa cttgctagga taatagatca tgaagtctgt
     2641 cttggcgcta tgtttgtcga tatgggaggg cttacaaact actggtatct ttataatcct
     2701 agagagagga tttataactt tttatctaaa ctgacaggcg ctagatttac aaattcattt
     2761 gcgaggatcg gcggcatggc aaatgatttt tacgatggct ggaaagaaga gcttttggcg
     2821 catttaaaag atgtagaaaa aggcgttgat gatactatga ttttaataga aaaaaatcgt
     2881 atatttttag atagagtaca aaatatatgc aaaataaacg ctaatgacgc attgagttat
     2941 ggttttagcg gtccaaattt aagggctagt ggtgtgagct ttgatcttag aaaagataag
     3001 ccgtattatt actatgatag ttttgatttt agcgttccag taggaagcga aggcgatata
     3061 tacgatagaa tgtttgtgag attttttgag atgagagagt ctatatctat cataaggcaa
     3121 gctataaaat taataccaga aggcaaaata agcgtagatg ataaagatgt atttttacca
     3181 tcaaaagatc aagtatattc aaatatcgaa tcactcatca accattttaa actaattttt
     3241 gatggaatta aacttccaaa cggacatttt tatagtgcta gtgaaggagc taacggtgag
     3301 cttggatttt ttatatttag taattcagag cctaatcctt accgagtaaa acttagaccg
     3361 ccgtgttttt atgcgttaaa tgcattttct agtatggtac aaggatctct tatagcagat
     3421 agcatattaa acttgggaag tctaaacatc atagcagggg agctagatag atgaaattcg
     3481 aatttactca tgagcaatta tcggctctaa acgagcttaa gaaaaaagta gatgatgata
     3541 gagcgcttgt tcttccgtct ctttggatgg tgcaaagagc gcaaggattt atagacgcta
     3601 aggatgtttt atatctagaa aaaacacttg gtataagaag tatgttctac gctgaagcga
     3661 tcggttttta ttctatgttt aatcaaaaat cgaaaggaaa atttgaactc aagttttgca
     3721 aaactataac atgtaagcta agaggcagtg acgaacttat caaatttaca caagatattc
     3781 ttggtataaa aatgggtgaa acttctagcg acggactttt tagccttggc gaaaccgaat
     3841 gccttggata ctgtgaaaaa gcgccttgta tgctttgcaa ccttgaacaa atcgactctt
     3901 tagacgaaaa ttccataaca aatttgatag aaaaaataag gaaagaaaat gcaagtagtt
     3961 agttctagat tttctatcaa aaacggctat aaaatagatg ttgcaaaagc taatggagct
     4021 tatttaaatt tagaaaatat cttgaaaatg gatagaaatt caatagtaga agcagtagat
     4081 aaaagtggat taagaggcaa aggcggcggc ggcggctcat gtggaactaa gtggaaaaat
     4141 atgcttgctt gggaaagcga taagcgttat ttggtagtaa atggcgatga gagcgagcct
     4201 ggaacttgca aagacaagta tattttaaat ttagatccgc atttgcttat agaaggaatt
     4261 atcatatcat cttacgcact aggagctaag agagcttatg tttatatacg aggtgaatac
     4321 gaaagagagt ttataactct tacaaatgcg ataaaagagg ccgctaacga gcttggagat
     4381 ttagaaataa tagtttataa aggagccgga gcttatattt gtggtgaaaa aacagcttta
     4441 ttagagtcta tagaaggtaa aagaggtcac ccaagattaa aaccgcataa taaagccgag
     4501 ccggactttt tgtttggttg cgcatgtgtg gtaaataatg tagaaactat agctagcatt
     4561 ccttttatag tgaaaaacgg ctgggaagca tatagatctg tcggtactga aaaaagcccc
     4621 ggaactcttt tatttgcagt atctggatgt gttaatactc cttgcgtaaa agagatgcct
     4681 tttggcacga aaatgataga ttttataaat gattttggcg gtggagtatg gaaaaataga
     4741 gagttaaaag cagttatccc cggaggctca agtgccgcag ttttgacaaa agacgaagtg
     4801 ctaaaagcta ctcttgatta tgaaagttta aaggaattta aaagcgcatt gggcaccggt
     4861 ggaatgatgg tgtttgatga tactattagt atgccagaag tgcttttaaa tttgcttgag
     4921 ttttatacag aagagagctg tggacaatgc acgccttgtc gtgaaggctg tggttgggct
     4981 ttgagagttg taaaaaagat agtagaaggc gaaggctctt taagagactt agatacgcta
     5041 aaagatatat catatatgct tgatggaaag actatttgcg tctttgctcc ggctgtaaag
     5101 gatgtaatta tgggatttat cactaaattc gaaaacgaat ttgtagcgct atgtaaggaa
     5161 actaagtgat ggttaatata gttgtcgacg gagagacatt tagtgtagat aaaaacggta
     5221 acttaatcac cgagctaaag aagcataata ttgaaattcc gcatttttgt tatcatgaag
     5281 cgcttggcgt gagtggaaat tgtaggatgt gcctcataga agtagtaggt caaaaacgcc
     5341 ctcaaatagc ttgcaatact cctattagcg aaggaatgga gataaaaata aacagcgagc
     5401 ttactagaaa agttcaaaaa ggcattttag agcttgagtt tataaatcat ccaatagact
     5461 gcccagtgtg tgatcaagcc ggcgaatgtt cgcttcaaga gtattatatg tgctatgata
     5521 aaggcgattc aagagttagt cttgcccaaa aggtgcgaaa acctaaaaaa gaggattttg
     5581 gatcaaatgt catccatgac gccgaacgct gcgtactttg tagacgttgt gtgagattta
     5641 cagaaatttg cacaaagact tacgagcttg gagtaggaaa tagaggtgag catagcgaaa
     5701 taattttatt taacgatgaa aaaataaaca atccatatgc cggaaatatc gtagatgttt
     5761 gtcctgtggg tgctatgact tcagctgatt tccgttttaa aaaaagagtt tggcacctaa
     5821 agagttctcc ttctatatgt caaggttgtg agagaggctg tgccatttgg gtagatagca
     5881 gtcaagataa gtatgaatat aataaaattt atcgctttag accgcgagtc gataactcag
     5941 taaatggtca ttttatctgc gattttggtc gttatagtta taaaaatgag cagattatag
     6001 tccaagaaaa tagtaatgag cttattttaa atttaaaaaa tgatttagac aagaccagcg
     6061 gcaaatttga tattttgatc acctcgtctt tatctcttga agagatgttt tgtgttataa
     6121 attttgctaa agagtataac gctaggatct atggttggga taattttaga gatgagagtt
     6181 tttgcgatag tgagggtttg atgcttcgct atccaaataa aacagcaaat aaacaaggtt
     6241 tggattattt ttataataaa tcttatatat caaaagatat atctgatatt agagatagag
     6301 ttatcgtttt tcatttaggc ggcgagttgg attttttaaa tttaaaagat aaaaacataa
     6361 ctttcatagg atcttgcaat agtgctgata tagtttgcgc tagtgcgtat catagagacg
     6421 ggcacagtgt taatgttgat aataaattaa gatttagtaa ggcggcattt ttaaatttat
     6481 cgcctagtat agaacagatt atacaaacat tatctcgaaa tagttataaa tttgataaag
     6541 atattttaaa ggcgtttgaa tgaatgagct ttttttgacc atttttagga ttgttttcat
     6601 actttcgttt atacttttgc tcataccgat tttggtctta ctcgagcgta aaatttcagc
     6661 ctttatccaa gatcgtcccg gaccaaatag ggcaaatatc gcaggtatta ggttgggcgg
     6721 tattatacaa gctctagccg acgctcttaa gctcgctata aaagaggatt ttactccatc
     6781 tagtattcgt tctaagtttt tatttactat agcgcctatg atactatttc ttatgagtac
     6841 gcttactata gcagttattc cattttcaga ttattttact atcgatggcg ttaaacatct
     6901 tatgcaagga attccttttg atggcggaat gttatggtat cttggagtag cgtcgcttag
     6961 tatttatggt attatgcttg ccggatacgc ttcaaataat aaatattcac ttttaggttc
     7021 gcttagagca gcttctggag ctattagcta tgagattccg cttggacttg ctgttgttag
     7081 tatgattttg acttacgact ctataaattt aaatgatttt gttttgcaac aacaaggctc
     7141 gtttttaggt ttgccatcat gggggatatt tatccagcct ttggctgcta ttatatttat
     7201 aatatgtgca tttgcagaga caaacagagc tccgtttgat cttgcagaag gagaaagcga
     7261 gatagttgct ggttatcact tagagtatag tgcaatgagt tttgcaatgt tttttatggc
     7321 tgaatatata gcaatgacgg ctatgagtgc tcttataatt actatatttt ttggcggata
     7381 ttcgcttcct tatcttagca ccgcagatct tgtaaacaac tataaaatag tacttttaag
     7441 catagtattt attatcacta ttttaggttt tatctttgtg ttatggataa ataaaaataa
     7501 tgttacaaga tataaagtca caaacgactt tagaaaaaaa gagaataaat tttacaaaat
     7561 ttgtacgttt atagtagtcg ctatcacaga tgttatctgt ttttacctat attttacagg
     7621 cttgcaaagc cttggtcagg aaattttagt aactatactt tatctaacta tatttgcttt
     7681 aaaaacattt gttatgcttt ttgtgtttat ctgggtacgc tggactgtgc caagatttag
     7741 atatgatcaa attcaaagac tcggctggga aaagctcatg cctttagcga tatttaatat
     7801 cataataaca gcaatggtgg tggtatatgg caattaaaac aaaaactata cgcagaaaaa
     7861 aaataccgtt tttacaaaga atttatctac cttttatatt tgcgggtatg gctagaacat
     7921 ttaggcattt ttttaggaat ttaaaagata gctcaaatat cgatttttta gggtatccag
     7981 aacaaaaacc aactgatata acaaatcgct acagaggtct tcacaggctt actaaaaacg
     8041 aaaaaggcga tctaaaatgt gtggcgtgtg atatgtgtgc taccgcatgc ccggcaaatt
     8101 gcatttttat cactgctact gagatagaag gtagcaaaga aaaagcgcct tctaaattta
     8161 ctatagatct gcttgaatgt gtgttttgcg gactttgcgt agaggcgtgt ccaaaagacg
     8221 ctatcaggat ggatactggt atctttacta aagtaggcaa caccagagaa tcgtttttag
     8281 ccgatataaa aactttatca caaagagaag aggggagctt ttgatggaac tttttttatt
     8341 tataaatttc tctttattcg ccattttagg aagcttaggt cttattttat ttaaagctcc
     8401 tattcatggg gctttgagcc ttatagttac tttagtttct atagccggtt tatatctttt
     8461 actgtttgct aagactctat ttttaattca aattgtagta tatgccggag ctatcatggt
     8521 gctaagtgtt tttgtaatga tgttttttaa tatcaaaagc gacactttgt tcgtaaagct
     8581 taaaccaaaa tctttttttg ttattattcc tcctactgtt atatttgcga ttttgctaga
     8641 tgagatttgg aaattaccaa gtgattttgg aattgcaccg cttgattttg gagaaataaa
     8701 accgcttgga ttttatctat ttacaaattg gggtttgagc tttgaggcga tatctttgct
     8761 tttgacagcc gcattaatcg gtgtggtggc tattttaaaa ggcaaaaaca atgcttgatt
     8821 tttatatatt agtggctttg atcctatttt ttatcggcgt tttaggagtt attcttagaa
     8881 aaaatatctt tactatattt atgtcagtag agcttatgtt gaacgctacg gcgctgatat
     8941 ttgctacctt tgctagacaa agtctaaatt tagacggaca agtaatagtt atgctaataa
     9001 tcgctatagc tgcagctgaa gctagtttcg gtttggctct tatagtgctt ttatacaaga
     9061 aaaagcagag tttaaacata gatatttttg atgagttaaa ggatagagat gttagttagc
     9121 attgtagttt tagcgcctat tataggcagt attttactag gtttgactta tttagctaga
     9181 aatactctta agatatcgca gcttggtttt gcatttttag gtatggcagc tcctattact
     9241 agctttgttt gtatgacgat tttgttttta aattcgcaaa tagaaccgat taatttaaat
     9301 atgtttggtt ggatagaagc cggtatattt aaaatagatg tcgggtttta tcttgatcat
     9361 ttaagccttt taatgggtct gtttgtaact tttttaggta tgctgataca tctgtattct
     9421 atcggatata tggataaaga tatcggtttt ggcaagtttt tttgttatat gaatttattt
     9481 ttaggcagta tgctcatact tgtacttgca aataatccgg ttctgatgtt tgtcggctgg
     9541 gaaggagtgg gagcttgttc atatctactt atatcgtttt actttagctc taaagacaat
     9601 gtaaaagccg gaaataaagc atttatacta aacagaatcg gtgattttgg ctttgttata
     9661 ggtcttgtta gtttgtatct tgctacttct ccatatggtt ttaattatga aatattagct
     9721 aaaagcgcac ctcttatacc ttcaaatttg gccattttta tagcgttttg ttttatatgc
     9781 ggagcgcttg ctaaatcagc gcaaataccg ctttacacgt ggcttcctga tgctatggcc
     9841 ggcccgactc ctatttctgc tttgatacat gcagccacta tggtaacagc gggtgtttat
     9901 atggttgtta gatttggatt tttatatgaa cacttaaatt tcgttctaga aatacttgcg
     9961 ataatcggtg tagcaagtgc gctttttgcg gctataattg ctgtaaaagc tacagatatc
    10021 aaaaaaatcc tagcctactc tactatgagt cagcttggat atatgtttgc cggacttagt
    10081 tttagttctc aagcagcttt atatcatctt tttacgcatg gattttttaa agcgcttctg
    10141 tttttgggtg ccggatctgt gataatagcc ttgcatcacg aacaaaatat atttaaaatg
    10201 ggctctttac ataaaaataa agtactcttt tatcctatgt tatttgggtc gcttgccata
    10261 agcggagtgt ttcctttcgc aggatttttc tcaaaagacg cacttatatt aggagcgttt
    10321 ttaagcggtc attattttat atctggagtt ttgctattta cagcaggact tacctcttat
    10381 tatattttta ggctattttt tctagttttt tattctcaaa atgaagcacc taaacagcat
    10441 aaactcccat ttactatgag ttttgtaaat gtaatactcg ctatattttc tcttatagga
    10501 ggaggtatgg ctatgttttt aagcttagag catgttagtt tatcagtaga gataatagcc
    10561 ggagttgtta gcttattcat ttcattttta ggaattttta tagcctacaa aaagttctat
    10621 aattacaaaa attgtgaaga gcaaacttgt tgttttgaga atttggttat aaataaattc
    10681 tatgttgatg aaatttatga ctttgttttt gtgcgcagct ttgcaagttt aagtaaattt
    10741 gtaagagaag ttttagacgc aaagattttt tatccatttg ttttaggaac cgctagaatg
    10801 tttaagttta gcggttttgt atattctaaa tttacacaaa acggacttgc tggctcttac
    10861 gcgttttata tgttagcttt tatctgcatt tttatccttt atataaaggt tagtttatga
    10921 ctggtttttc acatatttta agtttgatta tatttttacc gtttattgtt ggagttttga
    10981 tagctctgtt ttttaatgat aaagcaggta agttgacggc ttttgttgtt agtattgtag
    11041 tggctgtttt agggctagtt ttatttttta aatttgatcc gaatgccggt atgcagtttg
    11101 tcgatagcat atctttagtg ccgaaatacg gcattagtta cttagtcggt gtagatggaa
    11161 taaatttata tatcttactt atcattactt ctgcatttcc acctctgttt tttattttaa
    11221 aaaacagaaa aaaaggttac tgggcaaata tgctttttat gcaaagtggg tttttgtctg
    11281 ttgtttcatc gctcgatctc gtatattttt atgccggctg ggagatgatg ctcataccta
    11341 tatttattat ggtcggaatt tacggaaagg attcaggaag agccggagct cttatggata
    11401 tgatgtatta cgcgatattt ggttccatga ttatgctcgg agccatcata tatatcggag
    11461 ctgctcatta ttatgaattt ggatttttta gctttagact tgaagatctg attaaagtaa
    11521 gtttaaactc ggatttgcag actgttttat ttttctgctt tatgttggct tttgttataa
    11581 agctgccttt gtttccattt catctttgga tgagcaatgc ttatacaaaa tcgcttacga
    11641 ctgctacttt tatgctttct gttatcgctt caaaagtagc tgtttttgcg atattgcgtt
    11701 ttgttttgcc tttatttccg gtgtcttttg taaattattc tacatggttt atatctcttg
    11761 ggctattttc tatgttatat tttggtatag cggctatcaa ggtgaaagat tttaaaactt
    11821 tgcttgcata tgcttcggcg tctcatttgg gacttataat agccggagta tttgccctag
    11881 atgtagaagc tatgaccgga tctatgtatc aagtcgtggc gcatgctatt actagcggaa
    11941 ttatgttctt gttagtcggt atgataagtg agcagctagg aactagaaag ataagcaagt
    12001 taggcggact tgctataaag gcgcctgttt ttgctactat ttttgctatc gcaatgatat
    12061 ctagcgttgg attacctgct actgttggtt ttgtaggcga acttttgatt atatttggat
    12121 tatttaaggc taatttaatt tatggtattt tcggtacgac ttctatagta ataggagcta
    12181 tttatatgtt tatagtctat agaaaagcta ttttacaaaa tacgaatgag cttacggcta
    12241 aatttaaaga tctaagaaag cgtgaaattt tggcattttt agtagctgtt gctatgatat
    12301 ttatcatggg aatttatcca aaacctttta taaagcagat agaacctact atg
//
LOCUS       DAPPKW010000056        12273 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.056, whole genome shotgun sequence.
ACCESSION   DAPPKW010000056 DAPPKW010000000
VERSION     DAPPKW010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12273)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12273)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12273
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.056"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(177..2735)
                     /locus_tag="RPW04_001335"
     CDS             complement(177..2735)
                     /locus_tag="RPW04_001335"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HDX6295425.1"
                     /translation="MGFFDDYSVAKEERSKLGIPPLPLTKEQTKEVCELLKTCPTKEL
                     VDLLANRVNPGVDDAAKVKAEFLNEIINHDLKCDLIDKFTAIKMLEPMLGGYSVIVLV
                     ASLHNSDESIQKASAEVLKNTIFVHDYFNDIAKLAKDGNKYAKSVLESWANAQWFKAR
                     ADIPEKIEAVVFKVAGETNTDDLSPASEAFSRSDIPLHANAMLVKRQPGSLEKIAELK
                     KSGLEVIYVGDVVGTGSSRKSGINSIQWHLGHEIDGIPNKKTGGIILGSIIAPIFFNT
                     AEDSGALPIVVNVDGLEMGDKIEIYPYKGEIVKDSKVVKTFKLEPNTLKDEVKAGGRI
                     PLIIARSLCSKARAELGLGNEDIFIKPSQPANNDNSGYTLAQKMVGRACGVQGVRAGM
                     YVEPMTLTVGSQDTTGPMTRDEIKELASLGFSADFVLQSFCHTAAYPKPTDALMHKTL
                     PDFMMSRGGVSLKPGDGVIHSWLNRMVLPDTVGTGGDSHTRFPIGISFPAGSGLVAFA
                     AVLGSMPLNMPESVLVRFKGKMQPGITLRDLVNAIPYYAIKKGLLTVEKKGKINVFAG
                     KILEIEGLPDLKVEQAFELSDASAERSAAACAVALNKEPVIEYLNSNVALIDAMIEAG
                     YGDEQTLARRRDKMKKWLGNPTLLEADKDAKYHTVIEIDMNDITEPILACPNDPDDVA
                     TLSEILADPKRPKNIDEVFVGSCMTNIGHYRALAEVLKGEGQVPARLWIAPPTKMDEK
                     QLRVEGKYSLFGAAGARTEVPGCSLCMGNQARVADNAIVFSTSTRNFDNRMGMGAQVY
                     LGSAELAAVCAMLGRLPSVEEYMKIVPAKLAGKENEIYKYLNFNLVPNFKLECY"
     gene            2884..3342
                     /locus_tag="RPW04_001336"
     CDS             2884..3342
                     /locus_tag="RPW04_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDX6295426.1"
                     /translation="MKIAYMKTPVGNLKISCHDGKITNIDFCDEFLDLEVNDKNLSLC
                     IHELELYFQGKLINFTTKINIVGSEFEQKVYKALLEIPYGNTVTYKYIADKIDSPKAA
                     RAVGNANSKNKIPIIIPCHRVVGVSNLGGYSGGNGIETKKILLNLEKSYL"
     gene            complement(3409..4425)
                     /locus_tag="RPW04_001337"
     CDS             complement(3409..4425)
                     /locus_tag="RPW04_001337"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012139903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3,4-dihydroxy-2-butanone
                     4-phosphate synthase/GTP cyclohydrolase II"
                     /protein_id="HDX6295427.1"
                     /translation="MAFDRVLQAIDDIKNGKMIVMVDDEDRENEGDIVYAACFSDIEK
                     VNFMITHAKGVLCTPVTRELADKFELSPMVSSNTSCHETAFTVSIDAKEAATGVSAYE
                     RDMTIKMLVDYNTKADDFVRPGHIFPLIAKKGGVLERTGHTEGSIDLCKLAGVAPVSV
                     ICEVVNDDGTMARRVDLEKFCSKFGLNMVSVSDIIEYRLHHEKLINIEDAKRSSIAGF
                     EALRYDVSDHLGNKHIAFVFGDIKDKTNVKFHKIRTDIELLSSPKYKEFISHLNILDK
                     EGGILIFLDGEDCNSNLFKNYGVGAQIVAYFGVKDIEILSSSEYKEFVAIKGFGLNIL
                     GYRS"
     gene            4600..5043
                     /locus_tag="RPW04_001338"
     CDS             4600..5043
                     /locus_tag="RPW04_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDX6295428.1"
                     /translation="MKVLLIKDVKGLGKAGEVKDVKDGYGNNFLIGKGLAKSATDAVL
                     KQYEAAKKRAQEEINYEINQNEKLKAELENIKIIIKTKLGANGALFGSITKDEIANAL
                     KEQKGYEVDKKALECDHIKATGIYDVALKLKHGISAKFKVEVAGE"
     gene            5043..5585
                     /gene="hslV"
                     /locus_tag="RPW04_001339"
     CDS             5043..5585
                     /gene="hslV"
                     /locus_tag="RPW04_001339"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDX6295429.1"
                     /translation="MFHATTILAYKGNKGSIIGGDGQVSFGNTVLKGNAVKIRKLLGG
                     KILAGFAGSTADAFNLFDMFERILESTKGDLLKAVIEFSKEWRKDKVLRKLEAMMLVL
                     DREHIFLLSGTGDVVEPEDGKIAAIGSGGNYALAAARALDKFADINEEELVKESLKIA
                     GEICIYTNTNIKTYALWDEK"
     gene            5582..6904
                     /gene="hslU"
                     /locus_tag="RPW04_001340"
     CDS             5582..6904
                     /gene="hslU"
                     /locus_tag="RPW04_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002945203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HDX6295430.1"
                     /translation="MNLTPKEIVKFLDDYVIGQDDAKRVIAVALRNRYRRMKLDKSIQ
                     EDIIPKNILMIGSTGVGKTEIARRLSKMFGLPFIKVEASKYTEVGFVGRDVESMVRDL
                     AMASLNLVKKEQREKNSDRINEYIEKKILEKLLPPLPKGASEDKLRDYESSYLRMKDK
                     LQKGELDHLNIELDIDQSTFEAGGNLPPDMAAMQESFIKVIGIANKKVKKEFKVKDAR
                     EALKNEASEKILDMESIKTEALKRAENEGIIFIDEIDKVAVSSGNSGRQDPSKEGVQR
                     DLLPIVEGSNVSTKFGNLKTDHILFIAAGAFHISKPSDLIPELQGRFPLRVNLDSLDE
                     KALYEILTKPKNSLLSQYKALLGIEGVELEFSDESIKEIAKVTQNTNQKVEDIGARRL
                     HTVIEKVLEDISFDADSYKNEKVTITKELVDKKLGDICQNEDLAKYIL"
     gene            6901..7770
                     /gene="era"
                     /locus_tag="RPW04_001341"
     CDS             6901..7770
                     /gene="era"
                     /locus_tag="RPW04_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDX6295431.1"
                     /translation="MKSGFISLIGRTNAGKSSLLNYLLNEKISMVSHKQNATRRKING
                     IVMHKDSQAIFIDTPGLHESNKTMNKLMVEAAIKSIGDCDLLLFVASVFDNIENYKKF
                     LNLKKDAPHLIAITKIDEASDKEIFAKLNEYQIYSDEFKAIIPLSVKKQAYKNILLDE
                     IYKYLPEHEYFYDPQYLTTANEREIFRDFILEAVYECVSDEVPYSTDVNVDKVVEKQN
                     ITEIYATIITDNEHHKAILIGKNGQTIKRIGINARKIINTLLNNKIFLKINVKIDKNW
                     NSNESIIKKNFLY"
     gene            7838..9325
                     /locus_tag="RPW04_001342"
     CDS             7838..9325
                     /locus_tag="RPW04_001342"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295432.1"
                     /translation="MKNKNHKPIISINPIKEKIYEFDSTFTTKSLSNLNKNSGFYISY
                     IEHKDVIISQINTNSLTSNSDEIDAIITQKAYEELDLDPNLEYTIKYIKQNDSDTSYT
                     VFIVNNQNILNLYQNTIEKVDYIDCITIAPLLMESLYSEKLLSGSQTDCFIYFDENDA
                     FLTIYDNGKYVLSRSLARQSLGQINSKFCELTGDKVEIADFLDELKTKGINIEQKDGL
                     NQVLDDAFYYVSDIINSVSKFQGLSIQNIYATSCVGNIPGLAKFIQDRILINTSDFNF
                     FNNIKSSNLDPSCLHVLMTLYAKDYISSKTKLNFSPFLRPPAIYQRDGGIFLIIATST
                     LIISLIYPIYQLISGIYLTKLINDQNIIISEQEIIVNNLENQLNKINYDIQVTKQNIY
                     DQDQQLGLKKSLLNQIYSKKRDYPVKSIALYEISKEINALGVKTTSIKINDKTALISL
                     ISNDDKRITKLITNIDNLKSYKVSTKQIALTGNGQYDSNITVEIR"
     gene            9325..9954
                     /locus_tag="RPW04_001343"
     CDS             9325..9954
                     /locus_tag="RPW04_001343"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295433.1"
                     /translation="MNIENILSRLDEYFAKKKKNEVYLIFVAMFLIISYTVYMFVLDK
                     TSNFYEEKLSGYHSAQEQYLNLKNTDEINNNIAMSKKTYNQNIFNLQNIKDENSYLSK
                     ELKILSQSIFNERDLNKFLDYLALEAKNNNISVIDIINNTGKIKPLSVEKFYDVNVSF
                     KANFNNIVRYISNLERSNNVIDIQNLDINVSQNNLNGNLNIIVWGIKSI"
     gene            9951..10349
                     /locus_tag="RPW04_001344"
     CDS             9951..10349
                     /locus_tag="RPW04_001344"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295434.1"
                     /translation="MKKYVFLMLISYTLSADEEIMKKYMDITKNISQSRQTLSPSELK
                     DIKDPFVSQRNIDQEQIDTNETAQDPYVLYAIVQNKVKINQSWYGIKDTIDIYTISSI
                     QKDSVILQNQTQTIKLNLKKGSSNVLINYK"
     gene            10327..11865
                     /gene="mshL"
                     /locus_tag="RPW04_001345"
     CDS             10327..11865
                     /gene="mshL"
                     /locus_tag="RPW04_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus (MSHA type) biogenesis protein MshL"
                     /protein_id="HDX6295435.1"
                     /translation="MSLLITNKNIFKILTILAIFFSTEALANECKSRVFNIKISNSVS
                     TAEILNQLSDMCHFSIIQNDEYASQVLQNQISGINIKDMTLKEIFDILINQNNLDYTF
                     YKNILKISSMQTKMFKIDYITSVREGTAIIKASVDSSPSEVGGNNNNNNNSNTNDQAG
                     YGLDNHIKTTEKFDFWQNLNAELKAILNNGSEKLIAPDPVINTNAGLITVTGTNTQLK
                     RVGDYLNQLENRLKKQVMIDVSIIAVELSNSYTKGIDWSKFELGFNSYLGNDPVTGAP
                     SSIQFGTGSAGNPAQSLRNITGGFVLGGGINLSMDGVLNFLETKGRTKVVSSPKIMTM
                     NNQQALITVGDNINYRVQEDTTNNNTQTAVTNTTYTQYSIFIGILLNLLPEVSDDGRI
                     MLRINPSLSSFKYGDDNRRQANIREIAPDTLQKKLSTVVQVNSGDTIILGGLIGETKG
                     KDNTSVPVLGDIPLFGNLFKSTKDSVSTTELIFIITPKVINNETPKQIRNSLKELGFS
                     ESVL"
     gene            11862..>12273
                     /locus_tag="RPW04_001346"
     CDS             11862..>12273
                     /locus_tag="RPW04_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDX6295436.1"
                     /translation="MNNYTALKEVFVDDNGIFDYVNLDKSTITYYKILNALKKPLKLV
                     LFYGKPGSGKTFLLHKIYKDISQKDKVIFFPQPFFNEADFINALSLEIFNQKIENPTY
                     ENLIANYKNSLKTDQHESKYIILLLDEAQLYPNFL"
BASE COUNT         4643 a         1995 c         1986 g         3649 t
ORIGIN      
        1 acttactagc attaaatgct gctatagaag cagagccgga gatcacggta gagaagctag
       61 caatacatag agtttagaaa ctatagataa tgaagtgttt agtgaagtta aaaggaagaa
      121 gtttaactag gttataaatt caaaaatcta taaaaagggc aaaaatgccc tttttattaa
      181 taacattcta gcttgaagtt cggtactaga ttgaaattta aatatttata aatttcattt
      241 tcttttccag caagttttgc cggaactatc ttcatatatt cttctacact tggaagtcta
      301 cctaacattg cgcaaactgc cgcaagttcg gcagaaccca gataaacttg agctcccata
      361 cccatacgat tatcaaaatt tctagtagaa gttgaaaata ctatcgcatt atcagctact
      421 ctagcttgat tacccataca tagtgagcat ccaggaactt cggttctagc gcctgccgcg
      481 ccaaataacg agtatttgcc ctctactctt aactgttttt catccatctt tgtaggtggt
      541 gctatccaaa gacgagcagg aacttgtcct tcgcctttta gaacttctgc taaggctctg
      601 tagtgaccga tgtttgtcat acaactacct acgaaaactt catctatatt tttagggcgt
      661 tttggatcgg ctaaaatctc gcttaatgta gctacgtcat ctggatcatt cgggcaagca
      721 aggatcggct ctgtgatatc attcatatct atctcgataa cggtatgata tttcgcatct
      781 ttatcagcct ctaaaagagt aggatttcca agccattttt tcatcttatc tcttcttcta
      841 gctagtgttt gctcatcacc gtatccggct tctatcatcg cgtctatcaa agctacgttt
      901 gaatttaagt attcgatgac tggctctttg tttagcgcta cagcgcaagc tgcggcactt
      961 ctttcggcac ttgcgtcgct tagctcgaat gcttgctcta cttttagatc aggcaagcct
     1021 tctatttcta aaattttacc ggcaaatacg ttgattttac cttttttctc gactgttaaa
     1081 agaccttttt tgatagcgta gtacgggatc gcatttacaa ggtctcttaa agtgatacca
     1141 ggttgcattt tacctttaaa tcttactaaa acggattctg gcatgtttag aggcattgag
     1201 ccaagaacag ccgcaaacgc aaccaaaccg ctaccggcgg gaaagcttat accgatagga
     1261 aagcgagtat gagagtcgcc acctgttcct acggtgtcag gtaaaaccat tctatttagc
     1321 catgagtgga taacaccatc accaggtttc aagctgacgc cgccacgact catcataaaa
     1381 tcaggtaaag ttttgtgcat caaagcatct gtaggttttg ggtaggctgc agtatggcaa
     1441 aaactttgca aaacgaaatc agcagaaaat ccgagactag cgagctcttt tatctcatct
     1501 ctcgtcatcg gtccggtcgt atcttgagag ccaactgtta aagtcatagg ctctacgtac
     1561 attccagctc tcacgccctg cactccacac gcacgaccta ccattttttg agctaaagta
     1621 taacctgagt tgtcgttatt tgccggttga gacggtttta taaatatatc ttcatttccc
     1681 aaaccaagct cggctctagc tttagaacaa aggcttctag cgattataag tgggattctg
     1741 ccgcccgctt ttacttcgtc ttttaaggta tttggctcaa gtttaaatgt ttttactact
     1801 ttagagtctt ttactatctc acctttatat ggataaattt cgatcttatc gcccatttct
     1861 aagccatcta catttactac gataggtaaa gcgccgctat cttctgcagt attgaagaaa
     1921 ataggagcta tgatagatcc aagtataatg ccgcctgttt ttttatttgg tatgccatct
     1981 atctcatgac ccaaatgcca ctggatagag tttataccgc tttttcttga acttccggtt
     2041 ccaactacgt cgcctacata tataacttct aagccgctct ttttaagctc ggcgattttt
     2101 tctaaactgc ctggttgacg cttaactaac atagcatttg catgaagcgg tatgtctgag
     2161 cggctaaatg cttcacttgc aggacttaaa tcatcggtgt ttgtctctcc tgctacttta
     2221 aaaacgacag cttcgatttt ttctggtata tctgctctag ctttgaacca ttgggcgttt
     2281 gcccagctct caagaactga tttagcgtat ttattaccat cttttgcaag ttttgcaata
     2341 tcattaaaat aatcatgtac gaaaatagtg ttttttaata cttcagccga tgctttttga
     2401 atgctctcgt cactattatg aaggctagct acaagaacta tcacgctata tccgccaagc
     2461 ataggctcaa gcatttttat agctgtaaat ttatcgatca aatcacattt taaatcatgg
     2521 tttataatct cgtttaaaaa ctcggctttt acttttgcag cgtcatctac cccgggattt
     2581 acacgatttg caagcaaatc aacaagttct ttagtcggac aggtttttaa caattcacaa
     2641 acctctttag tctgctcctt cgtaagtgga agcggtggga taccgagttt tgaacgctct
     2701 tctttagcta cactataatc atcaaaaaag cccataattt ttcctttaat aaaattttta
     2761 atataattct atcataatta acaaaatgaa aaaagaaaaa ttaaacttaa atttgatatt
     2821 ttatgatact ttaaagaaaa agtaaattta aaatttaaat ttagtataaa aaaggattaa
     2881 attttgaaaa tagcatatat gaaaactccg gttggaaatt taaaaataag ctgtcatgat
     2941 ggaaaaatta caaatataga tttctgtgat gaatttctag atttagaagt aaatgacaaa
     3001 aacttaagcc tttgcataca cgaattagag ctgtattttc aaggaaaatt aataaatttt
     3061 acaactaaaa ttaatatagt aggaagcgaa tttgaacaaa aagtatataa agcactactt
     3121 gaaattccat atggaaacac tgtaacttat aaatatatag ccgacaaaat cgactctcca
     3181 aaagcagctc gagccgtagg aaatgcgaat tctaaaaaca aaattcctat tataattcca
     3241 tgccatagag ttgtaggagt atcaaattta ggcggatata gcggtggaaa tgggattgaa
     3301 acaaagaaaa ttttactaaa tttagaaaaa tcttatttat agaatttagt ttataaaaat
     3361 aactttatag ttttgccatt tctataccac gacaaaacta tgaaaatatc aacttctata
     3421 tccaagtata tttaatccaa aaccttttat agcaacaaat tctttatact cgcttgaact
     3481 taaaatttct atatctttaa caccaaaata tgctacgatc tgagcaccga caccgtaatt
     3541 tttaaataaa tttgaattac aatcctcgcc atcaagaaat atcaaaattc cgccttcttt
     3601 atctaaaata ttaaggtgag atataaattc cttatatttt ggagagctaa gaagctctat
     3661 atctgttcta atcttatgaa atttaacgtt tgttttatct ttaatatctc caaacacaaa
     3721 tgcaatatgt ttatttccta aatgatcact aacatcgtat cttaaagctt caaaaccagc
     3781 tatagagctc cgtttcgcat cttctatatt tatgagtttt tcatgatgca aacggtattc
     3841 gattatatcc gaaacactca ccatatttaa tccgaattta gaacaaaact tctccaagtc
     3901 tactcttcta gccatagttc catcatcatt tacaacttcg catataacag aaaccggagc
     3961 aactccggct aatttacaca gatctatact tccttcggta tgtccggttc tctccaaaac
     4021 accgcctttt ttagcaataa gaggaaaaat atgccccgga cgcacaaaat catcggcttt
     4081 agtattataa tcaactagca tttttatagt catatcacgt tcataagcac ttactccagt
     4141 agcagcctct ttagcatcga tgcttactgt aaaggctgtt tcatgacaac tagtatttga
     4201 acttaccatt ggagaaagtt caaatttatc tgctaattct ctagtaacag gagtgcataa
     4261 aacacctttt gcatgagtta tcataaaatt tactttttct atatcgctaa aacaagcagc
     4321 gtaaactata tccccttcat tttcacgatc ctcatcatct accataacaa tcattttgcc
     4381 attttttata tcatcaatag cttgcaaaac cctatcaaaa gccatatttc catacctttt
     4441 ttaaaaaatt ttgtaaaatt atacattgat atttgaaata ctaaattaat attaatattg
     4501 tgtaaaaaag tttaaattta gcttccaaaa tactacttta tggttatgtt aaatgtttta
     4561 tgttagaatg tactttaaat ttaaaataag gattatgtta tgaaagtatt gctgataaaa
     4621 gatgtaaaag ggcttggaaa agccggggaa gtaaaagacg taaaagatgg ttatggtaat
     4681 aattttttga taggaaaagg tcttgcaaag tctgctaccg acgctgtttt aaaacaatac
     4741 gaagcagcca aaaaaagagc acaagaagag ataaactatg aaatcaacca aaacgaaaag
     4801 ctcaaagccg aacttgaaaa tataaaaata attataaaaa caaagctagg tgcaaacgga
     4861 gctctatttg gcagtataac aaaagacgag atagcaaacg ctctaaaaga gcaaaaaggg
     4921 tatgaagtag ataagaaagc gcttgagtgt gatcatataa aagcaaccgg aatttatgac
     4981 gtagcgttga aactaaaaca tggaatttcg gctaaattta aagttgaagt agcgggtgaa
     5041 taatgtttca tgctacaact attttagctt ataagggcaa caaaggctct attataggtg
     5101 gagacggcca agtaagtttt ggaaataccg ttttaaaagg aaacgcagta aaaatccgaa
     5161 agcttttagg gggtaaaatt ttagcgggtt ttgcgggaag taccgccgat gcgtttaatc
     5221 tatttgatat gtttgagcgt atacttgaaa gcactaaagg tgatctttta aaagccgtta
     5281 tcgaatttag taaagagtgg agaaaagata aagtactgcg taaacttgaa gctatgatgc
     5341 tagttcttga tagagaacat atatttttac taagcggtac gggagatgta gtcgagccag
     5401 aagacggaaa aatagcagca ataggaagcg gtggaaatta cgctttagcc gcagcaagag
     5461 ctcttgataa atttgctgat ataaatgaag aagaactcgt aaaagagagt cttaaaatag
     5521 caggcgaaat ttgcatatac acaaatacaa atataaaaac ttatgcttta tgggatgaaa
     5581 aatgaatctt acaccaaaag agatcgtaaa atttttagat gattatgtta taggacaaga
     5641 tgacgcaaaa agagttatcg cagtagctct tagaaaccgt tatagaagaa tgaaacttga
     5701 taaaagtatt caagaagata ttataccaaa gaatatcttg atgataggct ctacgggagt
     5761 cggtaaaacc gagatcgcaa ggcggctctc aaagatgttt ggtttgccat ttatcaaagt
     5821 agaagctagc aaatataccg aagttggctt tgtgggtaga gatgttgaat ctatggtgcg
     5881 agatttggct atggctagtt taaatttagt aaaaaaagag caacgcgaaa aaaattcaga
     5941 tagaataaac gagtatatag aaaaaaagat acttgaaaaa cttcttcctc ctcttccaaa
     6001 aggtgctagt gaggataaat taagagatta cgaatctagc tatttgcgta tgaaagacaa
     6061 actccaaaaa ggcgaactag atcatttaaa tatcgaatta gacatagacc aatctacttt
     6121 tgaagccggt ggaaatttgc ctccagatat ggctgctatg caagaaagtt ttatcaaagt
     6181 cataggtata gcaaataaaa aagtgaaaaa agaatttaaa gtaaaagatg ctagagaagc
     6241 tctaaaaaat gaagctagcg aaaaaatttt agacatggaa agtataaaaa cagaagcttt
     6301 aaaaagagcc gagaatgaag gtattatatt tatagacgag atagataaag tagcagtttc
     6361 tagcggaaac tcaggacgtc aagatcccag caaagaaggt gttcaaagag atcttttacc
     6421 tatagtggaa ggttcgaacg taagtactaa atttggaaat ttgaaaacag atcacatctt
     6481 atttatagct gcaggagcat ttcatataag taaaccaagc gatcttatac cagaacttca
     6541 aggaagattt ccactacgtg taaatttaga tagcttagac gaaaaagcac tttatgaaat
     6601 actaacaaaa cctaaaaact cacttctatc tcagtacaaa gcactcttag gaattgaagg
     6661 agtagaactc gagtttagcg atgaaagcat aaaagagata gcaaaggtta ctcaaaatac
     6721 aaatcaaaaa gtagaagata taggagccag aagacttcat acggtcattg aaaaggttct
     6781 tgaagatata agttttgatg cagatagcta taaaaatgaa aaagtaacta tcacaaaaga
     6841 gttagtagac aaaaagcttg gcgatatctg tcaaaatgaa gatcttgcga aatatatact
     6901 atgaaaagtg gatttataag ccttataggc aggacaaatg caggcaaaag tagcctgcta
     6961 aattatctct taaatgaaaa aatatcgatg gtctctcaca agcaaaatgc tactagaaga
     7021 aaaataaacg gtatcgttat gcacaaagat tctcaagcta tatttataga tactccagga
     7081 cttcacgaaa gcaataaaac catgaataaa ctaatggtag aagccgcaat aaaatctata
     7141 ggagactgtg atttactgct ttttgtagca agcgtatttg ataacataga aaactataaa
     7201 aagtttttaa atttaaaaaa agacgctcct catctcatag ctattacaaa aatagatgaa
     7261 gctagcgata aagagatttt cgctaaatta aacgaatatc aaatatactc tgatgaattt
     7321 aaagccatca tacctttaag cgtaaaaaaa caagcataca aaaatatact tttagatgaa
     7381 atttacaaat atctgccaga acacgaatat ttctatgatc ctcagtactt gactactgca
     7441 aacgaacgtg agatttttag agattttata cttgaagctg tttatgaatg cgtaagcgat
     7501 gaagtgccct attctacaga cgtaaatgta gataaagtag tagaaaaaca aaatattaca
     7561 gaaatttatg caactataat tacggataat gagcatcata aagctatatt aataggtaaa
     7621 aacggtcaaa caattaaaag aataggtata aacgctagaa aaattattaa tactttatta
     7681 aataataaga tattcttaaa aatcaacgtc aaaatagata aaaattggaa tagcaatgaa
     7741 tcaattatta aaaaaaactt tttgtattga ctttttatta tttttatatt acaatgatag
     7801 cttcagaatt gacaaagaat aaaatatagg gttgtgaatg aaaaataaaa atcataaacc
     7861 gataatatct ataaatccta ttaaagaaaa aatatatgaa ttcgatagta ctttcacaac
     7921 caaaagccta tccaatttaa ataaaaacag tggattttat atatcgtata ttgagcataa
     7981 agatgtcatt ataagtcaaa taaacactaa ttcccttact tcaaattcag atgaaataga
     8041 cgccataata acacaaaaag cctatgaaga actagatctt gatccaaatt tggaatacac
     8101 gataaaatat ataaaacaga acgattcaga tacctcttac actgtattta tagtaaataa
     8161 tcaaaatata ctaaatttat atcaaaatac tatagaaaaa gtagattata tagattgtat
     8221 aaccatagca cctctgctta tggaatcttt atacagtgaa aaattactat cgggtagtca
     8281 aacggattgt tttatatatt ttgatgaaaa tgacgcgttt ttaactatat acgataacgg
     8341 taaatatgta cttagcagat cgcttgcaag gcagtcttta ggacagataa atagtaaatt
     8401 ctgtgagctg accggagata aagtggagat tgctgatttt ttagacgaac ttaaaacaaa
     8461 agggataaat atcgaacaaa aagatggtct aaatcaggtt cttgatgatg cattttacta
     8521 tgtttcagat attataaaca gtgtatcgaa attccaagga ctttccatac aaaatatata
     8581 tgcaacaagt tgcgttggca atataccggg acttgcaaaa tttattcaag acagaattct
     8641 tataaataca tccgatttta acttttttaa caatatcaaa tcatcaaatt tagacccctc
     8701 ctgcttgcat gtattgatga ctttatacgc aaaagattat atatcctcca aaacaaaact
     8761 aaatttttca ccttttttgc gacctccagc catatatcaa agagatggcg gaatattttt
     8821 gataatagca acaagcactt taatcataag tttaatctat ccaatctatc aattaatcag
     8881 cggaatctac cttacaaagc ttataaatga tcaaaacata atcataagtg aacaagaaat
     8941 tatagtaaat aacttagaaa atcaactaaa taaaatcaac tacgatatac aagtcacaaa
     9001 gcaaaatatt tatgatcaag atcagcaatt aggtctaaaa aagagcttac taaatcaaat
     9061 ttatagtaaa aaacgagatt acccagtaaa gagtatcgcg ctatatgaga tatctaaaga
     9121 gataaatgcg cttggagtta aaacgacgag tataaagata aatgataaaa cagcgcttat
     9181 aagtttaata agcaatgatg ataaaagaat aactaagctt ataacaaaca tagataatct
     9241 aaaatcttat aaagtaagca cgaaacagat agcgttaacc ggcaatggtc agtatgatag
     9301 caatataaca gtggagataa gataatgaat attgaaaata tattatcaag actagatgaa
     9361 tattttgcaa aaaagaaaaa aaacgaagtt tatctcattt ttgtcgctat gtttttgatt
     9421 atttcatata ctgtgtatat gtttgtgcta gataaaacat caaattttta tgaagaaaaa
     9481 ctaagcggat atcactctgc tcaagaacaa tatctgaatt taaaaaatac ggatgaaata
     9541 aataacaaca tagctatgtc taaaaaaaca tataatcaaa atatatttaa tttgcaaaat
     9601 ataaaagatg aaaactcata tctaagcaaa gagttaaaaa tactatctca atcaattttc
     9661 aatgaaagag acttaaacaa atttttagat tatttagcgt tagaagctaa aaataacaat
     9721 atatcagtga tagatatcat aaacaacaca ggtaagataa agcctctatc tgtagaaaaa
     9781 ttttacgatg taaatgtatc gtttaaagca aatttcaata atatagtaag atacataagc
     9841 aatttagagc gatcgaacaa cgtaatagat atacaaaatt tagatataaa tgtctctcaa
     9901 aataacctaa acggaaattt aaatatcata gtatggggta taaaatcaat atgaaaaaat
     9961 atgtattttt gatgcttata tcatatacct tatcagccga tgaagaaatc atgaaaaaat
    10021 atatggatat aacaaaaaac atatctcaat caaggcaaac tctaagccca tctgaactaa
    10081 aagatataaa agatccattc gtaagccaaa gaaatattga ccaagaacag atcgatacta
    10141 acgaaacagc tcaagatccg tatgtattat atgcgatagt tcaaaacaaa gtaaaaataa
    10201 atcaaagctg gtatggtata aaagacacga tagatatata cactatatct agtatacaaa
    10261 aagatagtgt aattttacaa aaccaaacgc aaactataaa attaaattta aaaaaaggta
    10321 gcagcaatgt ccttattaat tacaaataaa aatatattta agatattaac aattttagca
    10381 atatttttta gtactgaagc attagcaaat gaatgcaaaa gcagagtttt taatataaaa
    10441 atctcaaaca gcgtatctac agcagagata ctaaatcaac tttcggatat gtgtcatttt
    10501 agcattatac aaaatgacga atatgcaagt caggtactgc aaaatcagat atctggtata
    10561 aatatcaaag atatgacgtt aaaagagata tttgatatat taataaatca aaacaattta
    10621 gactatacat tttataaaaa tatactaaaa atttcatcta tgcagactaa aatgtttaag
    10681 atagattata taacttcggt gagagaagga actgctatca taaaagcttc tgttgattcg
    10741 tctccgtctg aggttggcgg aaacaataat aataacaata actcaaatac gaacgatcaa
    10801 gccggatacg gacttgataa tcatataaaa acaaccgaaa aatttgactt ttggcaaaat
    10861 ttaaatgcag agttaaaagc tatactaaac aacggaagcg aaaaactgat agcaccggat
    10921 cctgttataa atacaaatgc ggggctcata acagttactg gtacaaatac tcagctaaaa
    10981 agagtaggcg attacttaaa tcagcttgaa aacagactta aaaaacaagt aatgatagac
    11041 gtatccataa tagcagtaga actaagtaat tcatatacaa aaggcataga ttggtctaaa
    11101 tttgagcttg gatttaacag ctatcttgga aacgatcctg ttacaggagc tccatctagt
    11161 atacaatttg gtactggctc agcaggaaat ccggctcaaa gtctaagaaa tataacaggc
    11221 ggttttgtgc ttggaggcgg aatcaatcta agcatggacg gagttttaaa tttcctcgaa
    11281 acaaaaggta gaacaaaagt cgtctcaagt cctaaaatta tgactatgaa taaccaacaa
    11341 gctctaatta cggttggaga caatataaac tatagagtac aagaagacac aacaaataac
    11401 aatacgcaaa cagcagtaac taatacgact tatactcaat actcaatatt tatcggaata
    11461 cttttaaatt tgcttccaga agtaagcgat gatggcagga taatgctaag aataaatcct
    11521 agtttgagta gctttaaata cggcgatgat aatagaagac aagcaaatat aagagagatt
    11581 gccccggata ctttacaaaa gaaactatct acagtagttc aagtaaatag tggagatacc
    11641 atcattcttg gtggtttgat cggtgaaaca aaaggtaaag acaacacaag cgttccggtt
    11701 cttggagata tacctctgtt cggaaatctt tttaaaagca ctaaggattc agttagcaca
    11761 acagagctta tctttataat aacaccaaaa gttatcaata acgaaactcc aaaacagata
    11821 cgaaattcat taaaagaact tggattttca gagtctgtct tatgaataac tacactgctt
    11881 taaaagaggt ttttgttgat gataacggta tttttgatta tgtaaattta gataaatcca
    11941 ctatcacata ttacaaaatt ttaaacgctc ttaaaaaacc tctaaagcta gtgttatttt
    12001 atggaaaacc aggatccgga aagacatttt tactgcataa aatttataaa gatatatctc
    12061 aaaaagataa agtgatattt ttccctcaac catttttcaa tgaagcagac ttcataaatg
    12121 ctcttagtct agagattttt aatcaaaaaa ttgaaaatcc aacatacgag aaccttatag
    12181 caaattataa aaatagttta aaaacggatc aacatgaaag taaatatata attttacttt
    12241 tagatgaggc gcaactttat cctaattttt taa
//
LOCUS       DAPPKW010000057        12181 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.057, whole genome shotgun sequence.
ACCESSION   DAPPKW010000057 DAPPKW010000000
VERSION     DAPPKW010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12181)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12181)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12181
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.057"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..608
                     /locus_tag="RPW04_001347"
     CDS             <1..608
                     /locus_tag="RPW04_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6295437.1"
                     /translation="KTIFSNLSLNAGHKDKIAIIGSNGCGKTTLLEIIGGLRNPDSGE
                     IEIFHNTILNLKEYQKYRYLIGYLFQDSDDQFICPNVFEDVVFGLLTIGIQRSIADKR
                     AEEILKELDIWHLRDKIVFHLSGGEKKLVALAGVLVNKPKILLLDEPTAALDFDMQEK
                     VADLLIKLDITQIIVSHDKEFISRVANKMYYLNKDGLKLGD"
     gene            723..2807
                     /gene="topA"
                     /locus_tag="RPW04_001348"
     CDS             723..2807
                     /gene="topA"
                     /locus_tag="RPW04_001348"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018135954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HDX6295438.1"
                     /translation="MSKLIIVESPAKAKTIKNFLGSEYKVIASKGHIRDLPKSSFGIK
                     IEDDKFTPEYRVSSDHSAIVKEIKDLAKNADTIYLATDEDREGEAIAYHIAAAIGKKP
                     EMLPRIVFHEITKSAIQNALENPRSLNMDSVNAQQARRLLDRIVGYKLSPLLNSKIQR
                     GLSAGRVQSSALKILVDREREIRNFKPIEYFSIDTKFKKDLEAELVEFEGSKIEKLTI
                     TNKDRAKFIVDKIKDESFSVANVESKERKTSPQPPFMTSTLQQSASNRLGFSPKKTMM
                     LAQNLYEGVQTNNGFMGAITYMRTDSLNLAKEAISAARDLIKEQFGDKYLPKSANFYT
                     TKNKGAQEAHEAIRPTNLSFTPTEAAKFLEKDLLKLYTLIYNRFLACQMSASVSETQN
                     IFINSKSSIFKISGRKLTFDGFYRVYGDLDKDRILPNLNVGDKMELESLSSQSHFTEP
                     PSRYSEAGLVKKLESLGIGRPSTYAPTISLLTSRDYVKVDKKQLIPNEIAFNITSMLE
                     EHFNDIVDSDFTSKMEEKLDDIAENKADWQEVLSKFYHPFMQKIDDGKKNIKSQKVTE
                     PIGEKCPECGGELVKRKGRFGEFIACLNFPKCKYSRNLKNEAKIEKKEPQKIGVACPQ
                     CGGDIVERFSKKGKFFGCANYPKCNFISKYQPTDQKCPQCGEMMVYKELKKGNFYECS
                     ACKFKKEGNNNE"
     gene            2800..3642
                     /locus_tag="RPW04_001349"
     CDS             2800..3642
                     /locus_tag="RPW04_001349"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009294937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase"
                     /protein_id="HDX6295439.1"
                     /translation="MSKMVMLCAICNVSSGNCAEDCAYCTQSAHIKADIPKFKQKNLE
                     QILNEAKIASKNYALGFCLVTSGLGLDDKKLEFICEAATMLRKETPNLMLIACNGSAS
                     YESLKELKKVGIFSYNHNLETSREFFPQICTTHSWDDRFNTNLNAKKAGLELCCGGIY
                     GLGESQDDRLSFRASLKELNPFSSPINFFIPNPALKIKQPLLSTDEALEIIRDTAKTL
                     PQCRIMVAGGREIVLGDRQYEILENGASAIVIGDYLTTSGEVASKDIEELRNRGFEFA
                     SQCH"
     gene            3623..4789
                     /locus_tag="RPW04_001350"
     CDS             3623..4789
                     /locus_tag="RPW04_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDX6295440.1"
                     /translation="MHHSATNELSILIVLAFIIFISPYFSKLTKIPIAPIEIALGIIL
                     GFFGLLPNNDLFEIVAKVGFFYLIFLAGTEIDLRSFFKIDKKVLKLILAYLSVLYVIA
                     AFLGIWLEPAFLVFIVIPVMSVGMLSTLFKEYGKNEPWLNIAMITGSIGEVISIALLT
                     LVGAYVEFGNSSELYTSINYLIIFIVLCILGFKGLEVLFWWYPNLKILLMPHYDKDEK
                     DIRLSMAMFFGTVAVMIYLNLEIVLGAFIAGSFIATFFDHKKDLPHKLGSFGFGFLVP
                     IFFVYIGSTVDLNYIFIPGVLDNALLMLLFMTLIRVVSSFIFIKKLGAYGSILYGLSL
                     SMPLTLLVAVATVAYNANNIEKELYFSFILASLFEAILAMVLIKVTYYLKTRLK"
     gene            4871..6148
                     /locus_tag="RPW04_001351"
     CDS             4871..6148
                     /locus_tag="RPW04_001351"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HDX6295441.1"
                     /translation="MSNTVTLTDNRNGKSYEFPILDGTRGPSVIDISTLYKNTGMFTF
                     DRGYTSTAMCRSAITFIDGEKGELMHRGYDIAWLAENKLYLDVVYLLFNKHLPSQEEL
                     ELFRRELKERSFLNEKMIRLFDCFPDKAHPMAVLQASVATMSAYYKRDMNFDDMNDYM
                     ELAKRLVAKIPTFIAFYYRHVRGFPVIYPNLDRGFTENFLYMLRAFPHDKVDLKPIEV
                     KAFDTVLMLHADHEQNASTTTVRTVGSTHAHPYSCISAGIGALWGHAHGGANEGVIRQ
                     LEMIGTPDRVDEFIKRAKDHNDPFRLMGFGHRVYKNFDPRAKVLKGLRDKLINEIGID
                     NNLIKVASRIEEIALNDDYFVSRNLYPNVDFHSGLILKALGIPNEMFAAIFVMGRVPG
                     WLSQWMELKSQDTIKIVRPRQLYVGPTCPPKEQ"
     gene            6145..6927
                     /locus_tag="RPW04_001352"
     CDS             6145..6927
                     /locus_tag="RPW04_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HDX6295442.1"
                     /translation="MKELLNLSLKAARAAGKAILKHYDNYDVTIKNDNSPLTSADLAS
                     NEAIFKELESSGIPICSEEKILDYEKRDANSKFWLIDPLDGTKEFIAKNGEFCVCIAL
                     IDCARPILSVIYAPTSDEMFYSMGGSKVYKNGEILNSSCLEQNYIISGNFSHSKSVDI
                     IANRFGLDILRCGSALKFCRLSEGNADVYARFCGSSIWDIAAGEFLLKESGGIVVSLQ
                     DEKELRYDKKDLRNDYFLALSKKELPNLKNYLEFISLNLKSL"
     gene            7037..8059
                     /gene="pstS"
                     /locus_tag="RPW04_001353"
     CDS             7037..8059
                     /gene="pstS"
                     /locus_tag="RPW04_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HDX6295443.1"
                     /translation="MLKQIATLTIASAISAFSLNAADKIMGQGATFPLPVYKEWSKLY
                     YKATSNQVTYNGGGSGKGISAITDRNGEFGGTDSPLKNDELREKKLLQFPAIIGSVVL
                     AYNIEGIKDHELKLSATAVAGIFSGKITKWNDEIIKKDNANLKLPDALITPVVRSDSS
                     GTTFNFTSYLAKADESWAKEYGANKTINWGAKVTPAAGNPLVASTIKQVPNSIGYIEY
                     AYKLSTGLNAATLQTKDGDWAESTPQNFAKAAANSNFKIEENFYDVLAYSSGKGSYPI
                     VAATFILIPNDKIDDGKKVTKFFSWAFSDKDALEAAKKLGYEPLPKVTTDMIYDYWTK
                     YAVNPK"
     gene            8122..8997
                     /gene="pstC"
                     /locus_tag="RPW04_001354"
     CDS             8122..8997
                     /gene="pstC"
                     /locus_tag="RPW04_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HDX6295444.1"
                     /translation="MIKIQKNIIIEKLFFNAARISTIIVLVVLLAIFLSLVYKAYPAI
                     SKFGINFLFDTTWDANIMIFGGLASIYGTIVSTFIAMILATPVAIGIAIFLTEIAPYK
                     IRNFFSVNIELLAAIPSIVYGMWGFIYFVPLVRSVFGGSGFGLLSGGMVLAVMVLPFI
                     SSVSRDAMATTPQVLKESAYALGATKFDTIKDVVFPYAKAGIMGSIILALGRAFGETM
                     AVAFLLGGISKIPSSVTEPATSIPVTLATQFGEAMGNEIYESSLFYLALILFVISFIS
                     IATAKFVFLRKRESK"
     gene            8994..9833
                     /gene="pstA"
                     /locus_tag="RPW04_001355"
     CDS             8994..9833
                     /gene="pstA"
                     /locus_tag="RPW04_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018712655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDX6295445.1"
                     /translation="MSELKNIKEKSINKRVLISKIATYLSVVFTVFGLMFLFWIIATV
                     VVKGMAGFSAEIFISPTAFGGLANAFLGQLELVAIASFVGIPVGLLAGTYLSEYGVNQ
                     KKLNLIRNISDIMMSTPSIVIGAFAYALLVKPMNSYSGWAGSFALAVMMIPVVLKTTD
                     DMLSLVPKTLREASFALGATKYKCITSVVFRAAKNGLLTGIVLSIARVAGETAPLLFT
                     SANSDFFDFNLNNAIPSLTVSIYDFSSMPDESLKSVAWAGAFILAIFVLGVNILGRVL
                     IRK"
     gene            9844..10605
                     /gene="pstB"
                     /locus_tag="RPW04_001356"
     CDS             9844..10605
                     /gene="pstB"
                     /locus_tag="RPW04_001356"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013134826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HDX6295446.1"
                     /translation="MSLNLSINNFSFWYSGSSSPSLNKINLPIKEGKVTALIGPSGCG
                     KSTLLRSINRIHDLYPGNRYEGEIIFNGKNILRPKTDLINLRTKIGMIFQQPTAFPMS
                     IKDNVEYGLKLQGIKDKKTLSKIVEKSLKGANIWDEVKNRLNEDAGSLSGGQRQRLCI
                     ARAIAVNPEILLFDEPTSALDPISTIAIEELINSLKEQYTVVIVTHNMAQATRVSDFT
                     AFMYLGNLIEYGKTKQIFEEPREKLLKEYVSGKFG"
     gene            10724..12016
                     /locus_tag="RPW04_001357"
     CDS             10724..12016
                     /locus_tag="RPW04_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDX6295447.1"
                     /translation="MIKTVLPLSFIVASRFFGLFVVLPVLSLYALNLKGANELLVGLL
                     VGGYALTQMALQVPFGSLSDKFGRKNTMTFGLIVFIIGSLICAQATDIYTMLIGRLVQ
                     GSGAVGAVATAMISDFTTEEKRGHAMAIMGGMIGVAFAISMVVSPILSSKFGLASLFY
                     LSAALTFACIVLLYTVVPKESKIHHHDAKAPFLNLITQKNLFIMNITNLMQKMLMSAA
                     FVAIPIVLVNHLGYDSSRLWIVYLAAMVFGFISMGLAGFLGDAKGHSKKLLLIGVVLF
                     IISYLDFAFSENSLAFIIGVTLFFIGFNLHEPIMQSCASKFALASQKGAALGVFNAFG
                     YAGSFLGGAVGGYFLHKFNITYLAIFYSILSVFWLVLLFMLSDPKLFKNLYLKDADLS
                     KLDFVDGIVERYKNQKGYVVKYNSSIINEKQLRDILNK"
BASE COUNT         4115 a         1789 c         2399 g         3878 t
ORIGIN      
        1 aaaaaactat tttttcaaat ttaagtttaa atgcggggca taaagataaa atagcaataa
       61 taggctcaaa tggctgtggt aaaacaactt tacttgaaat aataggtggt cttagaaatc
      121 ccgatagcgg agaaatagag atatttcata atactatttt aaatttaaaa gagtatcaaa
      181 aatataggta tttgattggc tatttgtttc aagatagcga tgatcagttc atctgtccaa
      241 atgtatttga agatgttgtt tttggcttac ttacgatagg catacaaaga agtatcgccg
      301 ataaaagagc cgaagagatc ttaaaagagc ttgatatatg gcatttaaga gataagatag
      361 tttttcatct ttcaggcggt gaaaaaaagc ttgtcgcatt agccggggta ttggtaaata
      421 agcctaaaat tttactgctt gatgaaccta ctgccgcgct tgattttgat atgcaagaaa
      481 aagtagcaga tctgcttatt aagcttgata taactcagat catagtgtct catgacaaag
      541 agtttataag tagagttgca aataaaatgt actatttaaa caaagacggg ttaaagcttg
      601 gcgattaatt agtttaaaag ctgcttacaa tactcctgct gaactttttg taaagcttat
      661 attttatata cattttatat tttttagata gaattacgcc taataaaatc tagggtttaa
      721 agatgagcaa gttaattatc gtagaatctc cagcgaaagc aaaaactata aaaaattttt
      781 tgggtagcga gtataaagtt atagctagta aaggtcacat tagagatctt ccaaagtcta
      841 gcttcggcat aaaaatagaa gatgataaat tcacgccaga gtacagagta agtagcgatc
      901 acagcgctat agtaaaagaa ataaaagatc tagcaaagaa tgcagatacc atatatctag
      961 ctaccgatga ggatagagag ggcgaagcta tagcatacca tatagcagcc gcaataggta
     1021 aaaaacctga gatgcttcca agaattgtat ttcacgagat aacaaaatct gccatacaaa
     1081 atgcattaga aaatccgcgt agtttaaata tggatagcgt aaatgctcaa caagcaagaa
     1141 gacttttaga taggatagtc ggttataaat taagcccgct tttaaactca aaaatccaaa
     1201 gaggtcttag tgcggggcgc gttcagagtt cggctttgaa gatattagta gatagagagc
     1261 gcgaaataag aaatttcaaa cctatagaat attttagcat agatactaaa tttaaaaaag
     1321 atttagaagc tgaactggtt gagtttgagg gttctaagat agaaaagctt actataacaa
     1381 acaaagatcg tgcaaaattt atagttgata aaataaaaga tgagagtttt agtgtcgcaa
     1441 acgtagaaag caaagagcga aagacaagtc cgcagcctcc gtttatgact tctactttgc
     1501 agcaaagtgc gtcaaataga ctaggattta gccccaaaaa aactatgatg ttagcgcaaa
     1561 acttatatga aggtgtacag acaaataacg gttttatggg cgctataaca tatatgagaa
     1621 cagatagctt aaatttagct aaagaagcta taagtgcagc tagagacctg attaaagagc
     1681 agttcggcga taaatatctt ccaaaatctg caaattttta cactacaaaa aacaaaggag
     1741 ctcaagaagc tcatgaagct attcgtccta caaatttaag ctttactccg acagaggcgg
     1801 ctaagttttt agaaaaagat ctgctaaaac tctatactct tatatataat agatttttgg
     1861 cttgtcaaat gtctgcaagc gtatcagaaa ctcaaaatat atttataaac agtaaaagca
     1921 gtatttttaa aatttcgggc agaaagctta cgtttgatgg attttacaga gtttatgggg
     1981 atcttgataa agataggatt cttcctaatt taaacgtagg cgataaaatg gagcttgaaa
     2041 gcttaagcag ccaaagtcat tttaccgagc cgccatcaag atattcagaa gccggtttgg
     2101 taaaaaaact tgagagtctt ggtataggca gaccaagtac gtatgctccg actatttctt
     2161 tgcttactag cagagattac gtaaaagtag ataaaaaaca gcttattcca aacgagatag
     2221 catttaatat aactagtatg cttgaagagc attttaatga tatagtagat agcgatttta
     2281 cctctaaaat ggaagagaaa cttgatgata tagcagaaaa taaagcagat tggcaagagg
     2341 ttttatctaa attctatcat ccttttatgc aaaaaataga tgacggtaaa aaaaatataa
     2401 agagtcaaaa agtaaccgag cccataggtg aaaagtgtcc cgagtgcggc ggagagcttg
     2461 taaagcgaaa aggaagattc ggcgaattta tcgcttgttt gaattttcca aaatgtaaat
     2521 attctagaaa tttaaaaaat gaagctaaaa ttgaaaaaaa agagccgcaa aaaatcggtg
     2581 tagcatgtcc tcaatgcggc ggagatatag ttgagagatt tagtaaaaaa ggtaaatttt
     2641 ttgggtgcgc aaactatcca aaatgtaact ttataagcaa ataccaacct acagatcaaa
     2701 aatgcccgca atgtggtgaa atgatggttt ataaagagct taagaaaggc aatttttacg
     2761 aatgttctgc ttgtaaattt aaaaaagaag ggaataataa tgagtaaaat ggtaatgtta
     2821 tgtgcaattt gtaacgtgag tagcggaaat tgcgccgaag actgcgcata ctgtacacag
     2881 agcgcgcata taaaagccga catccctaaa ttcaagcaaa aaaatttaga acagatacta
     2941 aatgaagcta aaattgccag taaaaattac gctcttggat tttgtctcgt gactagcgga
     3001 ttaggacttg atgataaaaa gcttgagttt atatgcgaag ctgcaacaat gttacgaaaa
     3061 gaaacaccta atttaatgct gatagcttgt aacggatctg ctagctatga gagcttaaaa
     3121 gagcttaaaa aagtcggaat atttagctac aaccataact tagaaacaag tcgagagttt
     3181 tttcctcaaa tttgtacaac tcatagttgg gatgatagat ttaatacgaa tttaaatgct
     3241 aaaaaagccg gtcttgagct atgctgtggt ggaatttacg gacttgggga gagtcaagat
     3301 gataggctta gttttagagc tagtttaaaa gaactaaatc ctttttcaag tccgattaat
     3361 ttttttatac caaatcctgc tttgaaaatc aagcaacctc ttttaagcac cgatgaagct
     3421 ttggaaatca taagagatac tgctaaaaca ttgcctcagt gccgtataat ggtggccgga
     3481 ggtagagaaa tagtattagg agataggcag tacgagatac tagaaaacgg agctagcgct
     3541 atagttatag gcgactatct aaccaccagc ggagaagttg ctagtaaaga tatagaggag
     3601 cttagaaata gaggctttga gtttgcatca cagtgccact aacgagcttt ctattcttat
     3661 tgttttggcg tttataattt ttatatcgcc gtatttttca aaactcacaa aaatcccgat
     3721 tgctcctata gagatagctc tcgggataat tctaggtttt ttcggtctgc ttcctaataa
     3781 cgatttattt gagatagttg caaaagtcgg atttttttat ttaatatttt tagcgggtac
     3841 agagattgat ttacgctcat tttttaagat agataagaaa gtattaaaac ttattttggc
     3901 ttatctatca gttttatacg tgatagctgc gtttttaggt atatggttgg agcctgcatt
     3961 tttggtattt atagtaatac ctgttatgtc tgttggtatg ctctcaacgc tatttaaaga
     4021 gtacggtaaa aatgagccgt ggctaaatat cgctatgatc acaggaagta taggcgaagt
     4081 gataagcata gctttgctaa ctttagtagg cgcatatgta gagtttggta acagtagcga
     4141 actttataca agtataaatt atcttattat atttatcgtt ctttgtatac ttggatttaa
     4201 aggactcgag gtactttttt ggtggtatcc gaatctaaaa atacttctta tgcctcatta
     4261 tgataaagat gagaaagata taagactttc tatggctatg ttttttggca cggttgccgt
     4321 tatgatatat ttaaatttag aaattgtgct cggggcgttc atagccggaa gttttatagc
     4381 tacatttttt gatcataaaa aagatctacc tcataaatta ggaagttttg gatttgggtt
     4441 tttagttcct atattttttg tatatatcgg ctcaaccgtg gatttaaact atatttttat
     4501 accaggcgtt cttgataatg ctcttcttat gcttttattt atgacgctta ttcgtgttgt
     4561 tagttctttt atatttatca agaaactcgg agcttatggc agtattttgt atggtttatc
     4621 cctatctatg cctttaactc ttttagtagc ggttgctacc gtggcttata atgctaataa
     4681 tatcgaaaaa gaactatatt tttcatttat attagcaagt ttatttgagg ctattttggc
     4741 tatggtgctt ataaaagtta catattatct taaaacgagg cttaagtagt aaatttagta
     4801 tgttataatg atttttttta aataaaattt ggatagaata ttttaagata ttcacactaa
     4861 aaggatgaaa atgagtaata cagtaacact gacagataac agaaacggta aaagttatga
     4921 gtttcccata ttagatggaa caagaggtcc tagtgttata gatatttcga cgctttataa
     4981 aaacaccgga atgtttactt ttgatagagg ttatacaagt actgcaatgt gccgttctgc
     5041 tataacattt atcgatggag aaaaaggaga gttgatgcac cgcggctacg atatagcgtg
     5101 gctagctgaa aataaacttt atcttgatgt agtatattta ctatttaaca aacacctgcc
     5161 aagccaagag gagctggagc tatttagacg cgagttaaaa gagagaagct ttttaaatga
     5221 aaaaatgatt agattatttg actgttttcc cgataaagct catcctatgg ccgttttaca
     5281 agcaagcgta gctaccatga gtgcatacta taaaagagat atgaattttg atgatatgaa
     5341 tgattatatg gagcttgcaa aacgtttagt ggcaaaaatt cctacattta tagcgtttta
     5401 ttatcgtcat gttagaggat ttcctgtaat atatccgaat ttagatcgcg gatttacaga
     5461 aaatttctta tatatgctaa gagcttttcc tcacgataag gtagatttaa aacctataga
     5521 agtcaaggct tttgatactg ttttgatgct tcacgctgat catgaacaaa atgcttcaac
     5581 tactacagtt agaaccgtag gatctactca cgctcatcct tactcatgca ttagcgccgg
     5641 tatcggcgct ctttggggac acgctcacgg aggtgcaaat gaaggagtta tcaggcaact
     5701 tgagatgata ggaactccag atagggttga tgagtttatt aaaagagcaa aagatcataa
     5761 tgatccattc cgtttaatgg gatttggcca tagagtttat aaaaactttg acccgcgagc
     5821 aaaagtttta aaaggtctta gagataagct tataaatgag atcggcatag ataataatct
     5881 tataaaagta gcaagccgaa tagaagagat agcactaaat gacgattact ttgtatcaag
     5941 aaatttatat cctaatgtgg attttcactc cgggcttata ctaaaagctc ttggtattcc
     6001 aaatgagatg tttgcggcaa tatttgtcat gggaagagtt cctgggtggc ttagtcagtg
     6061 gatggagcta aaatcacaag ataccataaa aatagttcgt ccaagacagc tttacgtagg
     6121 acctacttgt cctcctaaag agcaatgaaa gagcttctaa atttatcgct aaaggctgct
     6181 agagcagccg gtaaagcgat tttaaaacat tatgacaatt acgatgtaac catcaaaaac
     6241 gataattcac cattaactag tgctgattta gcttctaatg aggccatatt taaagagttg
     6301 gagagttctg gtattcctat atgttctgaa gagaagatat tagattatga aaaaagagac
     6361 gcgaattcta aattttggct tattgatccg cttgatggca caaaagaatt tatagcaaaa
     6421 aacggtgaat tttgtgtttg tatagctttg atagattgcg ctagacctat tttaagcgta
     6481 atctatgctc caactagcga tgagatgttt tacagtatgg gcggctcgaa ggtctataaa
     6541 aacggtgaaa ttttaaatag ttcatgctta gaacaaaatt atattatatc aggaaatttc
     6601 agccactcaa aaagtgtaga tatcatagct aatcgttttg ggctagatat attaagatgc
     6661 ggttcggcac ttaagttttg taggctcagt gaaggaaatg cggatgttta tgcaagattt
     6721 tgcggctcta gcatatggga tatagcagcc ggagagtttt tgcttaaaga gagtggaggt
     6781 atagttgtat ctttgcaaga tgaaaaagag ctgcgatacg ataaaaaaga tcttagaaat
     6841 gattattttt tggcactaag taaaaaagag cttccaaatt taaaaaatta cctagaattt
     6901 atatctttaa atttaaaatc actttaatct atatttttta taaatttaaa tactaaaaat
     6961 atatttttgt tttgtttcca ttttgtttcc aagtatagtt aaaattccgc aatttaacaa
     7021 aatcaaagga gataaaatgt tgaaacaaat tgctacttta actatagcta gtgcgatatc
     7081 tgcgtttagt ttaaatgcgg ctgataaaat aatgggtcaa ggagctactt ttccgcttcc
     7141 cgtatataaa gagtggagca aactctatta taaagccact tcaaatcaag taacttacaa
     7201 tggtggaggc agcggcaagg gaataagcgc tattactgat agaaatggcg agtttggcgg
     7261 cactgattcg cctttgaaaa acgacgagtt gcgagaaaaa aaattacttc aatttcctgc
     7321 tatcatagga agcgttgtat tagcttataa tatcgaaggc ataaaagatc acgagcttaa
     7381 gctttcagct acagcggtcg ccggtatatt ttcaggtaaa ataacaaaat ggaatgatga
     7441 aataatcaaa aaagataatg caaatttaaa acttcccgat gctttgataa ctcctgtcgt
     7501 aagaagtgat tcaagcggaa ctacatttaa ttttacaagt tatttggcta aagcagacga
     7561 gagttgggca aaagagtatg gtgcaaataa aactataaat tggggagcaa aagtcactcc
     7621 tgctgcaggg aatcctcttg ttgcaagtac tattaaacaa gttccaaact ctataggcta
     7681 tatagaatac gcctataaat tatcaaccgg actaaacgcc gctactttgc aaaccaaaga
     7741 cggtgattgg gcagagtcta caccgcaaaa ctttgcaaaa gccgccgcaa actcaaattt
     7801 caaaatagaa gagaactttt atgacgtatt agcttattca agcggtaaag gtagttatcc
     7861 tatagtagca gcaacattta ttcttattcc taatgataaa attgatgatg gtaaaaaagt
     7921 tactaagttt tttagctggg catttagcga taaagacgct ttagaagcag ctaaaaagtt
     7981 aggatatgaa ccattaccaa aagtaacaac cgatatgatc tatgattact ggactaaata
     8041 cgcagtaaat ccaaaataga tataaaaata aaaaacagga cgtcataatc taaatttaag
     8101 acgtccgtat aaagagtata tatgataaaa attcaaaaaa atataatcat agaaaagtta
     8161 ttttttaatg cggcaagaat atcgactatt atagttttag tagtactttt ggctattttt
     8221 ttatctcttg tttataaagc ttatcctgct atttctaaat tcggaataaa ttttttattt
     8281 gatactacgt gggacgcaaa tattatgata tttggaggac ttgctagtat atacggaacc
     8341 atcgtttcta cttttatagc tatgatttta gcaactcctg ttgcgattgg tatcgctata
     8401 tttctaacag aaattgctcc ttataaaata aggaattttt ttagcgttaa tatagagctg
     8461 ttagccgcaa tcccaagtat agtttatggt atgtggggat ttatatattt tgtcccttta
     8521 gtaagaagcg tttttggcgg gagtggattt gggcttttaa gcggcggtat ggttctagcc
     8581 gttatggtgc ttccgtttat atcttctgtt tcaagagacg ctatggcaac tactccacaa
     8641 gtgttaaaag agtctgctta cgctttgggc gctactaaat ttgatactat aaaagatgtt
     8701 gtatttccat atgcgaaagc cggcattatg ggttctataa ttttagcttt gggaagagct
     8761 tttggcgaaa ctatggcagt tgcatttttg ctaggaggta tctcaaaaat accgagcagc
     8821 gtaacagagc cagctacttc gattccagta actcttgcta ctcagtttgg tgaagctatg
     8881 ggaaatgaaa tttatgaaag cagcctgttt tatctagcac ttattttatt tgttattagt
     8941 tttataagta tagctacagc taagtttgta tttttaagaa agagagaatc aaagtgagcg
     9001 agcttaaaaa tattaaagaa aaatcgataa ataaaagagt attaataagc aaaatagcga
     9061 cttatctaag cgtggtattt acggtatttg gtttgatgtt tttgttttgg atcatagcca
     9121 ctgtagttgt aaaaggtatg gctggattta gcgctgaaat atttatatct cctactgctt
     9181 ttggaggact tgcaaacgca tttttaggtc agctagagtt agttgctata gcgtcttttg
     9241 ttggtatccc tgtgggactt ttagcaggaa cgtatcttag cgagtacggc gtaaatcaaa
     9301 aaaagttaaa tttgataaga aatataagcg acattatgat gagtactcca agtattgtca
     9361 taggcgcgtt tgcttatgcc cttttggtaa aacctatgaa ctcatatagc ggttgggcag
     9421 gaagttttgc gcttgcggtt atgatgatac cggttgtttt aaaaactact gacgatatgc
     9481 ttagtttggt tccaaagaca ttaagagaag ctagttttgc tcttggagca actaagtata
     9541 aatgtataac aagcgtagtt tttagagccg ctaaaaacgg attattaaca ggaatcgtgc
     9601 tatctatagc aagagttgct ggagaaacgg ctcctctttt atttacaagt gcaaacagcg
     9661 acttttttga ttttaatcta aataacgcga ttccatcgct cacagtaagc atatacgact
     9721 ttagttcaat gcctgatgag agtttaaaat cagtagcatg ggcaggtgct tttatattag
     9781 ctatttttgt actaggagta aatatcctag gcagagtttt aatacgtaaa taaaggaaaa
     9841 gaagtgtctt taaatttaag tataaataat ttttcatttt ggtactccgg atcatctagc
     9901 cctagtttaa ataagataaa tttacccata aaagagggaa aagtaaccgc tttgataggt
     9961 cctagtggct gtggtaaatc tactcttttg cgttctataa accgtattca cgatctatat
    10021 ccaggaaata gatatgaagg cgagataata tttaatggta aaaatatctt acgtccaaaa
    10081 acagatctca taaatttaag aacaaaaatt ggtatgatat ttcagcagcc aacagcattt
    10141 cctatgagca taaaagataa tgtcgagtac ggactcaagc ttcaaggtat aaaagataaa
    10201 aaaactctct caaagatagt tgaaaagtct ttaaaaggag caaatatctg ggatgaggtt
    10261 aaaaatagac taaatgaaga cgccggctca cttagcggcg gtcagcgaca aagactttgc
    10321 atagccagag caattgcggt caatcctgaa attttgctat ttgacgagcc aacaagtgcg
    10381 cttgatccga tatcgactat agccatagaa gaacttatta atagcttaaa agagcaatac
    10441 acggtagtaa tcgtaactca taatatggct caagctacta gagttagcga ttttactgca
    10501 tttatgtatc ttggaaattt aatagaatac ggcaaaacta aacagatttt tgaagagcct
    10561 agagaaaaac ttttaaaaga gtatgttagc ggtaagttcg ggtgataata aatttgataa
    10621 atagccatta aagttagcag ataaaaattg ccctatttaa tttgcaaaca aagaaaatta
    10681 tgttaaaatc actattttaa tgcaaattaa tgcaaggaaa gatatgatta aaacagtttt
    10741 accgcttagt tttattgttg cttcaaggtt ttttggactt tttgtggttt tgcccgtgct
    10801 tagtctgtat gcgcttaatt taaagggcgc aaatgagctt ttagtcgggc ttttagtcgg
    10861 aggttacgct cttactcaga tggctttgca agttcctttt ggtagtctta gcgataagtt
    10921 tggacgtaaa aatacaatga cttttggctt aatcgtattt ataataggct ctttgatatg
    10981 cgcgcaagct actgatatct atactatgtt aatcgggcgt ttagttcaag gaagcggagc
    11041 tgtcggagcc gtggctactg ccatgataag cgattttact accgaagaaa aacgtggtca
    11101 tgcgatggct ataatgggcg gcatgatcgg tgtagcgttt gctatttcta tggttgttag
    11161 tccgatttta agttctaagt tcgggcttgc tagtctattt tatctctctg cggctcttac
    11221 ttttgcctgt attgttttgc tttatactgt agtgccaaaa gagagtaaaa tacatcatca
    11281 tgatgctaaa gctccttttt taaatttaat cactcaaaaa aatcttttta ttatgaatat
    11341 tacgaatttg atgcaaaaaa tgttgatgag cgcagcattc gtagccatac ctatagttct
    11401 agtaaatcat ttaggatatg atagcagtag gctttggata gtctatctag cagctatggt
    11461 ttttggattt atatcgatgg gattagcagg atttttagga gacgccaaag gtcatagcaa
    11521 aaagctgctt ttaataggcg ttgttctatt tatcatctct tatttggatt ttgcttttag
    11581 tgaaaatagc cttgctttta taatcggagt aactcttttt tttataggat ttaatctgca
    11641 tgagcctata atgcaaagtt gcgctagtaa atttgcatta gccagccaaa aaggtgcggc
    11701 tcttggagtt tttaatgcgt ttggttacgc cggaagtttt cttggaggag ctgtcggcgg
    11761 atatttttta cataaattta atataacata tcttgctata ttctactcta ttttatctgt
    11821 tttttggctt gtcttactat ttatgctcag cgatcctaag ctgtttaaaa atttatactt
    11881 aaaagatgct gatcttagca aacttgattt tgttgatggc atagtagaga gatataaaaa
    11941 tcaaaaaggc tacgttgtaa aatacaattc ttctataatc aatgaaaagc agctaagaga
    12001 tattttaaat aaataagtat atttttaaat tgaaagtatt tccacatgca atttggtaat
    12061 tttatcaagc attggaatta ctttataatg acaatattta gcaaaaatca tattattttt
    12121 taataaaaag atactattat atcgatcttt taatattcta atattgtatg attttataat
    12181 t
//
LOCUS       DAPPKW010000058        12144 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.058, whole genome shotgun sequence.
ACCESSION   DAPPKW010000058 DAPPKW010000000
VERSION     DAPPKW010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 12144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12144
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.058"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            18..1304
                     /locus_tag="RPW04_001358"
     CDS             18..1304
                     /locus_tag="RPW04_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009651399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HDX6295448.1"
                     /translation="MKKKNFFQAFGFVLVLSIGLFTTLNAKQNSEASRLEALAKLTKT
                     IAIVEKYYVDDQNFTQIIDKTIAGLMSNLDAHSSFLDEKAFKDMQIQTSGEFGGLGIT
                     VGMKDGALTVIAPIDDTPAFKAGVKSGDVILRIDGNSTIGITIDEAVSKMRGKPKTPV
                     NITVVRKGEKKPFDLTIIRDIIKVESVQAKLIKDDNILYLRVTNFDQHVTSKAREFIK
                     ENPNVKGIVLDLRNNPGGLLNQAVGLANLFIDKGIIVSQKGRSKEEDENYIADPSLFV
                     TKVPLVVLVNGGSASASEIVSGALQDLKRAVVVGENTFGKGSVQIVMPIDKTEALRLT
                     VARYYLPSGRTIQAVGVKPDVIVYPGKAPTEDENGFSLKESDLKQHLESELNKIEPKK
                     DEKNSKENKNIITQKEIYDDIQLKTAIDTIKILNIK"
     gene            1315..2028
                     /locus_tag="RPW04_001359"
     CDS             1315..2028
                     /locus_tag="RPW04_001359"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009293856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDX6295449.1"
                     /translation="MEKLEMIYEGKGKKMWSVKGHDDLLIAEFKDDLTAFNAEKKGSE
                     SGKGALNNKISTALFKLLKSKGIETALVDTINDTEQVVKKCKIIPLEVVVRNIATGSL
                     SKRLAIKEGTVLPFTLVEFYYKDDALGDPLVNDEHCIIMDLVKSENDLDRLKHLGREI
                     NSILLPFFKEKGLKLVDFKIEFGVDKDGNILLADEISPDSCRFWDSVTNEKMDKDRFR
                     QDLGSVKVAYEEVLRRILS"
     gene            2157..2387
                     /gene="purS"
                     /locus_tag="RPW04_001360"
     CDS             2157..2387
                     /gene="purS"
                     /locus_tag="RPW04_001360"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HDX6295450.1"
                     /translation="MKATINVFLKNGVLDPAGKATKHALSSLGFNGINDARIGKQIIL
                     NLDDATSDEDIKKMCEELLANTVIEDYEIIKG"
     gene            2390..3055
                     /gene="purQ"
                     /locus_tag="RPW04_001361"
     CDS             2390..3055
                     /gene="purQ"
                     /locus_tag="RPW04_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002950758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HDX6295451.1"
                     /translation="MKVAIIHFPGTNCERDTQYAFDKLGCETKIIWHKETSVDTDLII
                     LPGGFSYGDYLRTAAIAKFSPIMNAVINHAKKGGLVLGICNGFQMLLETNLLDGAMRR
                     NENMSFISKFHYLKIISTNNKFLSNLNNGDIVDIPLAHGEGNYYADDDTIKRLYDNDQ
                     VLLKYCDKDGNIVNVNGSIDSIAGICNKNKNIFGLMPHPERAIESILGSEDGIKMLKG
                     LIC"
     gene            3049..4299
                     /locus_tag="RPW04_001362"
     CDS             3049..4299
                     /locus_tag="RPW04_001362"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDX6295452.1"
                     /translation="MLKYILLLFLPFYTTLVAQEVSIFDMIDGKTTQNKENTIKNNQQ
                     QNTILQQNAKKQILPSEIQKIAPTDEPDENIDSTQIYQTIEPNKLILTASKMPRSVYI
                     YQVFSIKLKADTEQNLNFDLNLTVDSNDLIWLNPKPNWSELKRGIYETTLWFEANSTN
                     ANISNITLTLNRNDSFFQKSSISTEIPLIKNLKTDDKFANMVADKLEIKKVKSSKFDE
                     LYNLITIELESKNGNLSSFFIPQNFEKQGIESIKGDFVNQNGNYFIIADKDIKNINFS
                     YYNLKSSKFESFDIDIKVEVDDLSTQVNLNPKESEFELYKDIALYFIIVIFLLLFIFK
                     RSYYSFIIAIAFGIYTFYDNRPFSDAKLKINSEVKILPTSNSTIFFVANRPEKVKIMA
                     KNGNYTKILLENKKIGWVSNENIE"
     gene            4283..4960
                     /locus_tag="RPW04_001363"
     CDS             4283..4960
                     /locus_tag="RPW04_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HDX6295453.1"
                     /translation="MKILSKIKTILYAIELILSIAGVVLFMAIFKDKNRQIRRMWAKL
                     QRFFIRYQLEVVGKPIDEANLIIINHQSVLDIIVMEEIHPANLSWIAKKEIGKIPIIG
                     KILTIPKMIPIDRKDPRSLPKLIKDVKDRVDNNRVVAMFPEGTRSEGDKLLKFQSGAK
                     IIVSKLNLKVQPVLIINSRNILDTKRFKLNSGLLKVIYMDLIDTSNETWLEETRAKMQ
                     ALLDQNI"
     gene            4957..5343
                     /gene="crcB"
                     /locus_tag="RPW04_001364"
     CDS             4957..5343
                     /gene="crcB"
                     /locus_tag="RPW04_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HDX6295454.1"
                     /translation="MSFTTIFYIGFGGALGAILRSFTNGFVSKIFPNLSFPLGTLSVN
                     IIGGFFIGFLMSLASNINIDINLKSFLVTGFLGGLTTFSTFSYENMLLLQSGNYTNAF
                     LNIASNLLLSLLFCYFGFWIVKVMYA"
     gene            complement(5370..5921)
                     /locus_tag="RPW04_001365"
     CDS             complement(5370..5921)
                     /locus_tag="RPW04_001365"
                     /inference="COORDINATES: protein motif:HMM:NF015463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295455.1"
                     /translation="MKYIYKKIALGLAILISSISLYAIDEPSDYTPIVAIRSLLTGIP
                     ITRDDGGKAALGSNWTISEIQLPSRVGKFPFGVVQFVSVIKPGDCLSIDIRDKFSVTR
                     CESTAVGLYGVAFSILPTISSAVQIESIVKRGFCLSVVNPYAEQTIDQIGLKPCVVDE
                     NQDIPLENLFNISPAFNQARITR"
     gene            complement(5931..6725)
                     /locus_tag="RPW04_001366"
     CDS             complement(5931..6725)
                     /locus_tag="RPW04_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_107529138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit B family
                     protein"
                     /protein_id="HDX6295456.1"
                     /translation="MKKFIILALLSASLSFAAIEDYKIATWNMQGSSASTESKWNVNV
                     RQLITGDAAADILMLQESGSIPTTAVNTQRVFQGGTPVDEYTWNLGTNSRPNMVYIYH
                     SRIDVGANRVNLAIVSTRRADNVSIIYPEIAAARPAIGIHIRNDVFFTAHALASGGPD
                     APSLIHRVHDSFIGQGGINWVIGGDFNREPSSLLGALEGGLRNRVSIIAPNAPTQSSG
                     RTLDYLVAGNSGTSAFSAPAIAAILMLANMRAQITSDHVPVNFRKF"
     gene            complement(6735..7352)
                     /locus_tag="RPW04_001367"
     CDS             complement(6735..7352)
                     /locus_tag="RPW04_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RICIN domain-containing protein"
                     /protein_id="HDX6295457.1"
                     /translation="MNLFKKSLIVAYISILSYSIMSANSNVDPVHGPNRSDDPYNPVP
                     VFYNTPFNSDLVSIMAQNGVVITVWATAPLNWVWGYSARDSVPFGYLRIWRLKLYPKN
                     YVQIVNESTKTCLSAYLSGVVHTTCDVKSAPQFWEMIPFDNGAVQFKNFSDGRCLQTD
                     FERGFKFYNINLTPCVEKNRTNIDQQWMITAPTIKTRSVKEPLNF"
     gene            complement(7639..8190)
                     /locus_tag="RPW04_001368"
     CDS             complement(7639..8190)
                     /locus_tag="RPW04_001368"
                     /inference="COORDINATES: protein motif:HMM:NF015463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295458.1"
                     /translation="MKIYKFMLSILSVCFLNISLQADDDETNFTPLVSIRSLYSGVIL
                     SMEDNPSSLIKTNWNLREITLPYIISKDYPFGTVQFVSPVNDNVCLGLSLAGKLTTMS
                     CESTAVGNYGSVFSILPTNTSAVQIEAVAGLNECLSIVNSYASSSMDKFGVRKCIKDP
                     NKNILLENLIVIGSAFMPAKVVR"
     gene            complement(8200..8994)
                     /locus_tag="RPW04_001369"
     CDS             complement(8200..8994)
                     /locus_tag="RPW04_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit B family
                     protein"
                     /protein_id="HDX6295459.1"
                     /translation="MKNIYLILFCFSLSFGAIENYNLATWNMQGSSASTESKWNVNVR
                     QLIAGSNAADILFIQEAGSLPHSAVQSQRVVQRGGIPVHEYIWNLGTNSRPNMVYIYY
                     SRVDVGANRVNLAIVSRLQAEEVIVLTPPTTLSRPILGIRIGNDAFFSAHALANGGTD
                     SAAIVENVYRNFISSPNVNWVIGGDFNREPSSLVNILESSVRQRVSIIAPNAPTQSSG
                     RTLDYLVAGNSGASAFSAPAIAAILMLANMRSQITSDHIPVNFRRF"
     gene            complement(9003..9704)
                     /locus_tag="RPW04_001370"
     CDS             complement(9003..9704)
                     /locus_tag="RPW04_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RICIN domain-containing protein"
                     /protein_id="HDX6295460.1"
                     /translation="MKRFKFKNIIFAIFIGCSSSAYEQTNKFPNTIKNPLNSAPTTAH
                     YKPVLLAAANDLVRGPNKPVNPSNPFDDTKVFYNTPSVSDYVSIIGQNDALITIWALA
                     PLNWVWGYSPLNSRSFGDARIWRFIIYPKNFVQIQNKKTGTCINAYQNGIVHIPCEDT
                     NQAQFWELKPFSNGTVLIKNFASQTCLQSNSTKGYSYYGLYLVDCAEKAINLDQQWQI
                     IAPAMTTSPIPLPSR"
     gene            9933..11780
                     /gene="htpG"
                     /locus_tag="RPW04_001371"
     CDS             9933..11780
                     /gene="htpG"
                     /locus_tag="RPW04_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014769635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HDX6295461.1"
                     /translation="MATHEFQTEVSDLLNLMIHSLYSNKEIFLRELISNASDALDKLN
                     YLCLTDDNYKSLVYTPKIDIKLDKDAKTLIISDSGIGMDENDLINNLGTIARSGTKGF
                     LSSMSGDSKKDSSLIGQFGVGFYSAFMVANKIEVISRKALDDKAYKWISDTKNYSIEP
                     TTKDSQGTDIILYLNDDEFNDSFRIESIVKKYSNHIAYPIFMDKDEWIAPSGDEKEGH
                     YESKNSQINKASALWRMSKSSLKVEDYNDFYKQLSHDNSDPLMHIHTKAEGKIEYTTL
                     FYIPSTEPFDLFRVDYQSGVKLYVKRVFITDDAKELLPPYLRFVRGVMDVEDIPLNVS
                     REILQENRILATVKDQSIKKILSELEKMLNNDREKYIKFYTLFGKVLKEGLYGFSTNK
                     DEILNLCLFKSSNKDGLISLKEYKASMKEDQKSIYYISGQNEIMLRNSPLLESFKKQG
                     IDVLICDEEIDTIVMPMVYEYDKTQVKAVNSSDIDDEIKNDKNIDESKHAELLVKIKE
                     ALKDDVKDVKLSSRLNDSAACLIFDKNDPDYAMQSIFKQMGEKAIKVKPILEINPNHE
                     LFTKLEKNEIMVNDVSNLLLNMAKISEGMPVDNPNEFAKKLTNIMVKAL"
     gene            complement(11820..>12144)
                     /locus_tag="RPW04_001372"
     CDS             complement(11820..>12144)
                     /locus_tag="RPW04_001372"
                     /inference="COORDINATES: protein motif:HMM:NF012790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDX6295462.1"
                     /translation="DFNEEILNDKDIQIVDVRTPSEWAQTGVFKGAILVTYKNSDGSI
                     NPNFVNEVKSKLNTDKKVAVICRSGNRSRPASVLLDEGGVKNVINIDGGMNKAVDKNI
                     PTIKP"
BASE COUNT         4461 a         1926 c         2080 g         3677 t
ORIGIN      
        1 aaatttggag tttgaaattg aaaaagaaaa atttttttca agcatttgga tttgttttag
       61 ttctaagtat aggactattc acaactctca atgcgaaaca aaacagtgag gctagtagac
      121 tagaagctct tgcaaaactt acgaagacaa tcgcaattgt cgaaaaatac tatgtagatg
      181 atcagaattt tactcaaata attgacaaaa ctatagcggg tcttatgtca aatttagatg
      241 ctcattctag ttttcttgac gaaaaagcat ttaaagatat gcagatacaa acaagcggtg
      301 agttcggcgg tcttggtata acagttggga tgaaagatgg ggcgctaacg gttatagcgc
      361 ctatagatga tacgccggcg tttaaagcag gagtaaaatc aggtgatgtt atattaagga
      421 tagacggtaa ctctactata ggaataacta tagatgaagc agtaagcaaa atgcgcggca
      481 aaccaaagac tccagttaat attacggtag taagaaaagg agagaaaaag ccatttgatc
      541 ttacaataat ccgagatatc attaaagtag agtccgtaca agcaaaattg ataaaagacg
      601 ataatatact ctatctaaga gttacaaatt tcgatcagca cgtaacatca aaagctagag
      661 aatttataaa agaaaatcca aacgtcaaag gtatagtatt ggatcttaga aataatccgg
      721 gcggactttt aaatcaagca gtcggcttag caaatttatt tatagataaa ggaattatcg
      781 tttcgcaaaa aggtagaagc aaagaagaag atgaaaatta tatcgccgat ccatcgttat
      841 ttgttacaaa agttccttta gtagtgttag taaatggcgg aagtgcgagt gcgagcgaaa
      901 tagtcagtgg agcgctgcaa gacttaaaac gagctgtcgt agtaggtgaa aatacatttg
      961 gaaaaggaag cgtacagata gttatgccta ttgacaaaac agaagctctt agactaacag
     1021 tagcaagata ctatctgcca agcggtcgta cgatacaagc agtaggcgta aaacctgatg
     1081 ttatagtata tccgggcaaa gctccgactg aagatgagaa tggatttagc ttaaaagaga
     1141 gtgatttaaa acagcattta gaaagtgaat taaataaaat agaaccaaaa aaagatgaaa
     1201 aaaatagcaa agaaaataaa aatatcatca cacaaaaaga gatttatgat gatattcaac
     1261 taaaaactgc tatagatact ataaagatat taaacatcaa gtaaggagaa aatcgtggaa
     1321 aagttagaaa tgatctatga aggcaaaggg aaaaagatgt ggtctgtcaa aggacatgac
     1381 gacttgctta tagctgaatt taaagatgat ttgacagcat ttaacgctga aaaaaaaggc
     1441 tctgaaagtg gtaaaggcgc attaaataac aaaatttcaa ccgcactttt taaactgtta
     1501 aaaagcaaag gtatagaaac tgcgcttgtt gatactatca acgacactga acaagtcgtg
     1561 aaaaaatgca aaataatacc tcttgaagtg gttgtaagaa acatagcaac aggaagtcta
     1621 agcaaaagac ttgcgataaa agaaggaaca gttttacctt ttactttagt agagttttac
     1681 tataaagatg acgctttagg cgatccgtta gtaaatgatg aacactgcat cataatggat
     1741 cttgtaaaaa gcgaaaacga ccttgacaga ttaaaacatt taggaagaga gataaactct
     1801 atattgcttc cattttttaa agaaaaagga ttaaaattag tcgattttaa gattgaattt
     1861 ggcgtggata aggatggaaa tatacttctt gccgatgaga taagccccga tagctgccgt
     1921 ttttgggatt ctgtgacaaa tgaaaaaatg gacaaagata gattcagaca agatctagga
     1981 agcgtaaaag ttgcgtatga agaagttctt agacgcatac tttcttagaa ttatctaatg
     2041 atttagaagt actcttttta gctattttaa gtagatttgg tattttaatc actcttactt
     2101 aaaatagctt aaaaagtttt gtttaaagat ttagatatta aatttaaagg ttttatatga
     2161 aagcaacaat aaatgttttt ttaaaaaatg gagttttaga tcctgccggt aaagcgacta
     2221 aacatgctct atcttcactt ggttttaacg gtataaatga tgctaggata ggaaagcaaa
     2281 taattttaaa tttagatgac gcaactagcg atgaagatat aaaaaaaatg tgtgaagagc
     2341 ttcttgctaa tacggtaata gaagattatg agattataaa aggctaaaaa tgaaagtagc
     2401 tataatacat tttccaggaa caaactgtga aagagatact cagtacgctt ttgataaatt
     2461 aggctgtgaa actaaaatta tatggcataa agaaactagc gtagatactg atttgatcat
     2521 acttcctggt ggctttagct atggtgatta tctaagaacc gctgctatag ctaagtttag
     2581 tccgattatg aatgcggtaa taaatcacgc caaaaaaggc ggtcttgtgc ttggaatttg
     2641 caatggattt caaatgcttt tagaaacaaa tcttttagat ggagcaatga gaagaaacga
     2701 aaatatgagc tttataagca aatttcatta cttaaaaatt atatcaacta acaataaatt
     2761 tttatcaaat ttaaataatg gagacatagt agatatacct ttagctcatg gagagggaaa
     2821 ctactacgct gatgatgata ctataaaaag attatatgac aatgatcaag tattactaaa
     2881 atactgtgat aaagatggca atattgtaaa tgtaaatggc tcaattgact ccatagcagg
     2941 aatttgcaat aaaaataaaa atatatttgg actaatgcct catcctgaac gcgctataga
     3001 aagtattcta ggaagcgagg acggtataaa aatgctaaaa ggtttgattt gctaaagtat
     3061 attttactgt tatttctgcc tttttatact actttagtag cacaagaagt tagtattttt
     3121 gatatgatag atggtaaaac cacgcaaaat aaagaaaata cgataaaaaa taaccaacag
     3181 caaaatacaa tattacagca aaatgcaaaa aagcaaattc ttccttccga aatacaaaaa
     3241 attgccccaa cagacgaacc agatgaaaac atagatagca cacaaattta ccaaaccata
     3301 gagccaaaca agcttatact aacagcatct aaaatgccta gatctgtata tatctatcaa
     3361 gtttttagca taaaactaaa agcggacact gagcaaaatt taaatttcga cctaaactta
     3421 accgtggatt caaacgatct gatatggcta aatccaaaac cgaattggag tgaacttaaa
     3481 cgcggaattt atgaaacaac actatggttt gaggcaaata gcacaaatgc aaatatcagt
     3541 aatataactt taactctaaa tagaaacgat agtttctttc aaaaatcaag cataagtacg
     3601 gaaattccgc ttattaaaaa tttaaaaaca gatgataaat ttgcaaatat ggttgcagat
     3661 aaactagaga ttaagaaggt aaaaagttct aaatttgacg agctttataa cttaataaca
     3721 atagaacttg agagcaaaaa cggaaattta agctcatttt ttataccgca aaactttgaa
     3781 aagcaaggga tagagtctat caaaggagat tttgtaaatc aaaatggtaa ctactttatt
     3841 atagcagata aagatataaa aaatataaat tttagctatt ataatctaaa aagttctaaa
     3901 tttgaaagtt tcgatataga tataaaagtt gaagtcgatg atcttagtac gcaagtaaac
     3961 ttaaatccta aagagagtga gtttgagcta tataaagata ttgctttata ctttataatt
     4021 gtgattttct tgctcttatt tatatttaaa agaagttatt actcgtttat tatcgctata
     4081 gcatttggta tatatacatt ttatgataac cgacctttta gcgatgctaa acttaaaatt
     4141 aattcagaag tcaaaatact tcctacttca aactcaacta tattttttgt agccaacaga
     4201 cctgaaaagg taaaaataat ggcaaaaaac ggaaattata caaaaatact tctcgaaaat
     4261 aaaaaaatcg gctgggtatc aaatgaaaat attgagtaaa ataaaaacta tactttatgc
     4321 tatagagctt attttaagta tagcgggggt tgttcttttt atggctattt tcaaagataa
     4381 aaatcgacaa atcaggcgta tgtgggcaaa attgcagcga ttttttataa gatatcagct
     4441 agaagtagta ggaaaaccta tcgatgaagc aaatttaata ataataaatc atcaaagcgt
     4501 acttgatata atagttatgg aagagataca tccggcaaat ctatcttgga tagccaaaaa
     4561 agagataggc aaaataccta taataggcaa aatacttaca ataccaaaaa tgattccgat
     4621 agatagaaaa gatcccagat cgcttccaaa actcataaaa gacgtaaaag atagagtaga
     4681 taacaacagg gttgtagcga tgtttcctga gggcacaaga agcgaaggag ataagcttct
     4741 taaatttcaa agcggagcta aaataatcgt ttcaaaacta aatttaaaag tacagccggt
     4801 tctcatcata aactcaagaa atattttaga tacaaaaaga tttaagctaa atagcggatt
     4861 gctaaaagtc atatatatgg atttgataga tactagtaat gaaacttggc tagaagaaac
     4921 tagagcaaaa atgcaagctc ttttagatca aaacatatga gttttacgac tattttttat
     4981 ataggctttg gcggagcact aggagctata ctaagaagtt tcacaaatgg atttgtaagt
     5041 aagatatttc cgaatttatc ctttcccctt ggaactttaa gcgtaaatat cataggtgga
     5101 tttttcatag gttttttaat gagccttgct tcaaatataa atatagatat caatttaaaa
     5161 tcatttttag ttacaggatt tttaggagga cttacgacat tttctacatt tagttatgaa
     5221 aatatgcttt tacttcaatc aggaaattat acgaacgcat ttttaaatat cgcttcaaat
     5281 ttactattat ctttgctgtt ttgttatttt ggattttgga tagttaaagt tatgtacgca
     5341 tagctaagag agagatctcc tagcagtttt taacgagtaa ttctagcttg attaaacgca
     5401 ggagagatat taaacaaatt ttcaagaggt atatcttgat tttcatctac tacgcaaggt
     5461 ttaagtccta tttgatctat cgtctgttcg gcgtaaggat ttaccacact aaggcaaaaa
     5521 cctcgtttta ctatactttc aatctgaact gcagatgaaa tagtaggaag tatgctaaat
     5581 gcaactccat atagaccgac cgctgtactc tcgcatcgag ttacgctgaa tttatccctg
     5641 atatctatac ttaaacaatc tcctggcttg ataacagata cgaattgaac tactccaaac
     5701 ggaaatttcc cgactctgga tggaagttgt atttcgctta ttgtccagtt agatcctaaa
     5761 gcagcttttc ctccatcatc tcttgttatg ggaattcctg ttaacaagct tcttatagct
     5821 actattggtg tataatccga aggctcgtct atagcatata aagatattga tgatattaaa
     5881 atagccaaac caagtgcgat ttttttatat atgtatttca tttttattcc ttaaaatttt
     5941 ctaaaattta ctggcacatg gtcagatgtg atttgagctc tcatatttgc tagcataagt
     6001 atagcagcta tagcaggagc cgaaaaagca cttgttccgg agtttccagc aacaagataa
     6061 tcaagagttc tgccgctgct ttgagtcgga gcatttggag cgataatgct aactctattt
     6121 ctaagtccgc cttctaaagc tcctagtaaa gagctcggct cacggttaaa atccccgccg
     6181 ataacccagt ttatacctcc ttgtcctata aaagagtcgt gtacgcggtg aatcaaagat
     6241 ggagcgtctg gtcctccgct agccaaagca tgagctgtaa aaaatacatc gtttcttata
     6301 tgtatgccta tggcaggtct agcagcagcg atttcaggat atattatact tacgttatcg
     6361 gctcttctgg ttgaaacgat agccaaattt accctatttg caccgacatc tatcctagag
     6421 tgatagatat aaaccatatt cggacgtgag ttagtgccta aattccacgt atattcatct
     6481 actggggtgc cgccttgaaa aacacgttga gtatttactg ctgtagtcgg tatgctgccc
     6541 gattcttgca acataagtat atcagctgca gcgtctcccg ttattaactg tcgtacattc
     6601 acgttccact tgctttcagt agaagccgat gatccttgca tattccaagt agcaatttta
     6661 taatcttcta tagctgcaaa acttagactt gcgctaagca gtgctaatat tataaatttt
     6721 ttcattttta tcctttaaaa attaagcggc tcttttacag agcgcgtttt tatggttggg
     6781 gccgttatca tccactgctg atctatattt gttctatttt tctctacgca aggagttaaa
     6841 tttatgttat aaaacttaaa acctctttca aaatcagtct gcaagcatct tccatcgcta
     6901 aaatttttaa attgaacggc gccattatca aatggtatca tttcccaaaa ttgaggtgcg
     6961 gatttaacgt cgcacgtagt atgaacaact ccactcaaat aagcacttag gcatgtttta
     7021 gtggattcat ttacgatttg aacataattt tttggataaa gctttaatct ccaaattcta
     7081 agataaccaa aaggtacgct atctcttgca ctataccccc acacccaatt caaaggcgcg
     7141 gtagcccata cggttataac gactccattt tgagccatta tagatacaag atcagagtta
     7201 aaaggagtgt tgtaaaatac cggaacagga ttatacggat catcacttct atttggtcca
     7261 tgcaccggat cgacatttga attagcactc ataatagagt agctaagaat agaaatatac
     7321 gccacaatga gcgatttttt aaataagttc attttagtcc tttttaatat ggagtcattc
     7381 tatcttatat aatcttaaat aattattaaa tttactataa ataataaaaa taaataaatt
     7441 agcttaatat atttttataa cagtagatat aatcttattg tttagtaata atataacttt
     7501 aatatagtaa ataaatatgt tatttactat attcaaattt aaaacgataa atagaaacaa
     7561 atattaaatt tggatattta aatttagaaa ttttaattaa ataagccgaa aaaatatttt
     7621 tcacggcttt aatataagtt atcgcacgac ttttgcaggc ataaatgcgg agccgataac
     7681 aatcaaattt tcaagtaaaa tatttttatt aggatcttta atacactttc taactccaaa
     7741 cttatccata gatgaactag cgtatgaatt tactatacta aggcactcgt ttaatccggc
     7801 aacagcttct atctgaacag cagaagtatt tgtaggcaat atagaaaaca cgcttccata
     7861 gtttcctacc gcagtactct cgcaagacat agtagtgagt tttccggcta aacttagtcc
     7921 taggcaaaca ttatcattta caggagatac aaattgcacg gttccaaaag gatagtcttt
     7981 tgagatgata taaggaagag ttatctctct taaattccaa tttgttttta taaggctgct
     8041 cggattatct tccatactca aaataactcc agaataaaga ctccttatac taaccaaagg
     8101 cgtaaaatta gtctcatcgt catcggcttg caaagatata tttaaaaaac atacagataa
     8161 aatcgatagc ataaatttat aaattttcat ttttactcct taaaatcttc taaaattcac
     8221 gggaatatga tctgaggtaa tctgagatct catatttgct agcataagta tagcagctat
     8281 agcaggagcc gaaaaagcac ttgctccgga gtttccagca acaagataat caagcgttct
     8341 gccgctgctt tgagtcggag cgtttggagc gataatgcta actctttgcc gaacactact
     8401 ttctaaaata tttaccaaag aactcggctc acggttaaaa tccccgccga taacccagtt
     8461 tacattcgga ctagatataa aatttctata tacattttct actatggccg cagaatcggt
     8521 acctccatta gcaagagcgt gagcagaaaa aaacgcgtca tttcctatac gaataccaag
     8581 aatcggtctt gaaagagtag taggaggagt aagcactata acttcttcgg cttgcagtcg
     8641 agatacgata gctaaattaa cacgatttgc accaacatca acacgagaat aatatatata
     8701 aaccatattt ggacgtgaat tagtacccaa attccatata tattcatgta ctggtatacc
     8761 gcctctttga actactcttt ggctttgaac agcactatgc ggcaaactgc ccgcctcttg
     8821 tataaataaa atatcagcag cgttacttcc agctattaac tgccttacat ttacgttcca
     8881 cttgctttca gtagaagctg atgatccttg catattccaa gtagctagat tataattctc
     8941 aatagctcca aaactcaagc taaaacaaaa taatattaaa taaatatttt tcatgcaaat
     9001 ccctatctag atggtaatgg tatgggtgat gtagtcatag caggagctat tatctgccac
     9061 tgttgatcta aatttatagc tttttctgca caatcaacta aatataaacc ataataacta
     9121 taaccctttg tagagtttga ctgcaaacaa gtctgagaag caaaattttt tatcaaaaca
     9181 gtaccgttac taaacggttt taattcccaa aattgtgctt gatttgtatc ctcgcaaggt
     9241 atatgaacaa taccgttttg atatgcattt atgcaagtac cggtcttttt attttgaatt
     9301 tgcacaaagt tcttaggata aataataaac ctccaaattc tagcatctcc gaaagaacgg
     9361 ctatttaaag gagaataacc ccacacccaa ttaagcggtg caagtgccca gatagttata
     9421 agagcgtcat tttgtccgat gatagataca taatccgaga ctgatggagt gttataaaaa
     9481 accttagtat cgtcaaaagg attagacgga tttaccggtt tatttggacc tcgaacaagg
     9541 tcgtttgccg cggctaacaa aaccggttta taatgagcag tcgtaggggc tgagtttaga
     9601 ggattcttta tagtattagg aaatttattt gtttgttcat aggcactgct ggaacatcct
     9661 ataaatatcg caaatattat atttttaaat ttaaatcgct tcattgcaat tcctttttta
     9721 ttttaaattt aaattgtaca taataatagc ataatttgat atttattatt ataaattcat
     9781 taaaaaaatt ataaagtatt aataaaaata ctcaatttta atttttaaaa tttagaaaac
     9841 ttgatataat tactatcaac tttgctgatt atatcttgac aaaattagca ctcttagata
     9901 taatttgcta aaaattttta ggagaaatga aaatggctac acatgaattt caaacagaag
     9961 tcagcgatct tttaaattta atgattcact cattatactc aaacaaagag atatttttac
    10021 gagaacttat atcaaacgca agtgacgcgc ttgataagtt aaactatctt tgtcttaccg
    10081 atgataatta taaaagtcta gtttatacac caaaaataga tataaaacta gacaaagatg
    10141 ctaaaacttt gatcattagc gatagcggta taggtatgga tgaaaatgat ctgataaata
    10201 acttaggaac tatcgctaga agcggaacaa aaggattttt aagctcaatg agcggagatt
    10261 caaaaaaaga tagttcttta ataggacaat tcggagttgg attttactcg gcatttatgg
    10321 tagctaataa aatagaagtc ataagccgta aagcactaga tgataaagcc tataagtgga
    10381 taagcgatac aaaaaattat agtattgagc ccactacaaa agatagccaa ggaacagaca
    10441 tcatactata tttaaacgac gatgaattca atgatagttt ccgcatagaa agcatagtta
    10501 aaaaatactc aaatcatatc gcgtacccta tttttatgga caaagacgaa tggatagcgc
    10561 caagcggaga tgagaaagaa ggtcattacg agagcaaaaa ttctcaaatt aacaaagctt
    10621 cagctctttg gagaatgtct aaatctagtt taaaagtcga agattataac gatttttata
    10681 aacagctaag tcacgataac agcgatccgc ttatgcatat acatacaaaa gccgagggaa
    10741 agatagagta cacaacccta ttttatatcc caagtaccga accgtttgat ctatttagag
    10801 ttgattatca aagcggcgta aagctctacg taaaaagagt ttttataacc gatgacgcaa
    10861 aagaactgct tcctccatat cttagatttg ttagaggagt gatggacgta gaagatattc
    10921 cgctaaacgt aagtcgtgaa attctgcaag aaaaccgcat tttagcaacg gtaaaagatc
    10981 aaagcattaa gaagatattg agcgaacttg aaaaaatgct aaataacgat agagaaaaat
    11041 acataaaatt ttacacatta tttggaaaag tattaaaaga aggactctac ggatttagta
    11101 caaataaaga cgaaattcta aatttatgct tatttaaatc aagcaataaa gacggtttaa
    11161 tatctcttaa agagtataaa gcttctatga aagaagatca aaaatccata tactatataa
    11221 gcggtcaaaa tgaaattatg cttagaaact cgcctttact agaaagcttt aaaaagcaag
    11281 gaatagacgt tctgatttgt gatgaagaga tagatactat agtaatgccg atggtatacg
    11341 aatatgataa aacgcaggta aaagccgtaa atagctccga tatagatgat gagattaaaa
    11401 atgataagaa tatagatgag agtaaacacg ccgagcttct tgtaaagata aaagaagctt
    11461 taaaagatga tgtaaaagac gtaaaactct caagcagact aaatgactca gcagcgtgtc
    11521 ttatatttga taaaaatgat ccggattacg ctatgcaaag catatttaaa cagatgggtg
    11581 aaaaagccat aaaagtaaaa cctatacttg agataaatcc taatcacgaa ctatttacta
    11641 aacttgaaaa aaacgagata atggtaaatg atgtgtcaaa tttactttta aatatggcta
    11701 aaataagcga aggaatgcca gtagataacc caaatgaatt tgctaaaaag cttacgaata
    11761 ttatggtaaa agcgctctaa ataggcactt ttactacttt atcaaattta ttttgatttt
    11821 taaggtttga ttgtaggtat gtttttatct actgctttat tcatgccgcc gtctatgttt
    11881 ataacatttt ttacgccgcc ctcatctagc aaaaccgaag ccgggcggct tctatttccg
    11941 cttctacata taactgctac ttttttatct gtgtttagct tactttttac ctcattaacg
    12001 aaatttggat tgatacttcc atcgctattt ttataagtaa ccaaaatagc tcctttaaat
    12061 actccggttt gcgcccattc agatggagtt ctaacatcta ctatttgaat atctttgtca
    12121 ttcaaaatct cctcgttaaa atcc
//
LOCUS       DAPPKW010000059        11750 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.059, whole genome shotgun sequence.
ACCESSION   DAPPKW010000059 DAPPKW010000000
VERSION     DAPPKW010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11750)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11750)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11750
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.059"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..1083
                     /locus_tag="RPW04_001373"
     CDS             <1..1083
                     /locus_tag="RPW04_001373"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295463.1"
                     /translation="YSNTKNNSALMNSIIFTALIVAFISLIMFIIFLRIEKPKKLQLK
                     NRLKIIQEPFYMEKIHRKFMLSKPQQGDIVERLELFFKILHIKAAKNNNVVIFNYDPK
                     QHRYFSADFKIISYAVHMLTQFVINIISNSSIVLTIKSINATNNVYKVTLKANTNLIE
                     MDNNIKDALKGKTKNINYKKLVIASDIAKLLGSKLRYQSKSSEFEFSFNLLLTPIQKD
                     NNHKFINEYKNEISAIIAEDDINSFYTLTAGLRHYDIKTKPNHNWEIVKKHITDTIFK
                     PELVFIQAKIIKKLSKNDINVLKEHKERKNITFIILSNNSSYDDVNKLLDFETFILRQ
                     PYTQDALLAVLNRSQQVAMGGVWRIS"
     gene            complement(1104..1967)
                     /locus_tag="RPW04_001374"
     CDS             complement(1104..1967)
                     /locus_tag="RPW04_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HDX6295464.1"
                     /translation="MSFKDDLYDLVPHDKFSSVWNSFFKPKNVGFFINLLKADEKSVL
                     DELKILGVEFSKFYENFYICKSNFKSILTHCDLFNSGKIYIQNPSSFLAPLTLNAAPG
                     QTVLDMCASPGGKSIALSNFMEKNGYLATMESDTNRFFTLKSNLKKYNCEWVKTYNKD
                     ARSVSRTCYEKFDKILLDAPCSSYSCYNENFKEKSYKEIKNISKLQKQLLNSALNALK
                     SGGEIVYSTCTFYKEENEEVIKNALNSKFKIQILPIDVNLQQVVKSEFGIRILPDDTM
                     DAFFISHLIKL"
     gene            complement(1975..2349)
                     /gene="ruvX"
                     /locus_tag="RPW04_001375"
     CDS             complement(1975..2349)
                     /gene="ruvX"
                     /locus_tag="RPW04_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDX6295465.1"
                     /translation="MIVAIDVGLKRIGVAVAVLPTVVLPSEPILRKNRNQAAKDTLKM
                     LKEKNATKLVVGLPKGGSCEDEMERRIKHFISLVGFDSEIIYVDEAYSSCEASELSKD
                     SKDGRFDSIAAMVILKRYLNIL"
     gene            complement(2346..3113)
                     /locus_tag="RPW04_001376"
     CDS             complement(2346..3113)
                     /locus_tag="RPW04_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDX6295466.1"
                     /translation="MDFITDILSLKKLKKPVNKLYYKGNLELLNFPKVAIVGSRKCTS
                     YTKNIVLSLASTLKNYGICVVSGAAIGTDIHAHEGAFPNTIAVFGNGLNNIYPAQNSK
                     MIEKIYKDALALSEYEPNTFATPWSFLERNRIVVSLSDAVIIAEADIKSGSMSSARLA
                     LDMGIPLFVLPQRFNESNGTNDLLSKNRANLIADFDEFASKFGSLNSDLSKDDVLEFI
                     KINQNFDECYARFGDALYEYELEGKISIDRVYIRILS"
     gene            complement(3097..4182)
                     /locus_tag="RPW04_001377"
     CDS             complement(3097..4182)
                     /locus_tag="RPW04_001377"
                     /inference="COORDINATES: protein motif:HMM:NF016623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HDX6295467.1"
                     /translation="MLAIFGVIYAVSGSKKDPNLDSQKTIKKIERYLDTQKNEISKDK
                     NISFNRPNLKKDKNISELFETLKFKVDSNISDSDKNITVALPKEQIVSPLKPNLKKEI
                     SMFVDQNITSKLDENSSNSSLKYEQKNIEKIVKKQDIHKFEKPKLVIIIDDLSTMAQA
                     RDIKSLGLKITPSIFPPTDFYPDSVKISKQFEFYMVHLPLEAIFFKKNEQNTLNVGDT
                     KDKIENRISTIKKQFGNVSYINNHTGSKFTSDYSSMKMLLKSMKNHNILFVDSLTSKG
                     SKAKQVTKEMGLKYVFRDVFIDNDQSSVAIFKQLEIAIKKAKKNGFAIAIGHPYKVTF
                     ETIKVAKKTILKDVEVVYLKDIYGLYN"
     gene            complement(4261..5283)
                     /gene="ilvC"
                     /locus_tag="RPW04_001378"
     CDS             complement(4261..5283)
                     /gene="ilvC"
                     /locus_tag="RPW04_001378"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDX6295468.1"
                     /translation="MAITVYYDKDCDLSLIRSKKVAMIGFGSQGHAHAENLRDSGVDV
                     VVGLNPKGKSWAKAEAKGFKVMSVSEATKYADLIMILTPDEFQADIFKAEIEPNLSEG
                     NAIAFGHGFNIHYGQIIPPKGIDCIMIAPKAPGHTVRNEFVNGGGIPDLIAVSQDATG
                     KAKDLALSYASAIGGGRTGIIETTFKAETETDLFGEQAVLCGGLCALINAGFETLTEA
                     GYEPEMAYFECLHEMKLIVDLIYQGGMADMRYSISNTAEYGDYVSGVRVVNESSKAAM
                     KAILKEIQDGTFAKNFILERKAGYTKMNAERKISEASLLNKTGEKLRGMMPWINKGRL
                     VNKDKN"
     gene            5430..6242
                     /locus_tag="RPW04_001379"
     CDS             5430..6242
                     /locus_tag="RPW04_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDOD domain-containing protein"
                     /protein_id="HDX6295469.1"
                     /translation="MNQAIYKSIKTLPPLDDTIVRIQQICNDENSDINELITVIQKDP
                     MLTANILRSANSPLYGFSREITDINRAVTLFGMATIRGFALCGAIKKSFSIDLSPYNI
                     KDSQFMEIATTQNALAFNWYSKIDRELLNILSPASFMMEIGKIVIAKEILENDKNAAF
                     KDALTHISTPSELSDLEIDMVGISNEEVTVKIFEQWNLETEMIDAILYSNSPDDAPNH
                     IRASSIALKIIKNSVNIFGILSDENIQSTLTLLDTYGLEQAKFIDAVKKVKG"
     gene            6239..8167
                     /locus_tag="RPW04_001380"
     CDS             6239..8167
                     /locus_tag="RPW04_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacB/RNase II family 3'-5' exoribonuclease"
                     /protein_id="HDX6295470.1"
                     /translation="MKEFLNALVNGVDDKFIKIDEREILRVLEQIKAVKKHKNKYYLN
                     DGYVCGKLDISSGGTGFLMPYDVRFKQDIIIENRDLNGAHFGDIVLSKLTKSKKSRLH
                     ATMIAVLAMANETSVVYTKQFGQVIMGVSIPNSLTIALKASQKSLKELPIGTVLKINN
                     LDNDITEVLGVLSDPSVDEKISLAIYNKKNLFPKICENEAKSFGDNVDKSMYPNRVDL
                     TNLPFCTIDPVDAKDFDDAIYYDVKNRTVYVAIADVSEYVAAYSGIDKEAKFRGFSIY
                     FPHIAIPMLPRSLSENICSLKPNCDRLAFVFKISLDENLESIKEELFEAVIHSRKRFN
                     YDEVDEILALNLKTDDEIQEWILPLFETAKKLKFKRLQNGFDFRSKELRMSISTNGDI
                     LKTTYEKETPSHSLIEDCMLLANKAAAKRINHGIFRNHAPADLKKINTLLDDLAALGI
                     EITYESDLVALISKIQTQADSLNIREDVDKLIIKAQKRAEYASKPTGHFGLGFDLYSH
                     FTSPIRRYSDLILHRLLKANLENNAKLFNYLLLDIEGVCRGLNELEREADRVAWDFMD
                     RKFARWATNNINKVFRCYISEVGNQTIAKLDDEIKGARIYIENFTCSLLASVMVQIKE
                     VDIPSAKIIGKVVQKLDV"
     gene            8160..9152
                     /locus_tag="RPW04_001381"
     CDS             8160..9152
                     /locus_tag="RPW04_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002946423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDX6295471.1"
                     /translation="MYKKEFQNLLNSNRLPNYFLLFGNEEYQVEIFAKELISKFKSEN
                     LLSLYFDEYDFISAKSHLMESSLFCDSSTLHIKTDKKIPAKELKYLIDLCKKNTNNAF
                     IYELHEGDMKTIFDTKKAFGENFVRFFSPNTPAEGVSLLMYHAEKLGLNIQTSALYQI
                     YSLQNESLYLASSELNKLANLTKTINDDSVKKLVFSLNGISFELFFNKLISLQNIKDD
                     YFSYTNDSNFNEIALINSLYSSFFRLFKIQTYVKINGKFDIEKAIGYTPPPTILNQIK
                     SQALSIKTELYMDIFMKLNSIEYDIKTKKDIDKECFLLSSILSIQNLIAKNSKS"
     gene            9245..9631
                     /locus_tag="RPW04_001382"
     CDS             9245..9631
                     /locus_tag="RPW04_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDX6295472.1"
                     /translation="MKHYELLFILKPTLTEDEAKVKVDFIKEVITKNGGEIASVIEMG
                     TRKLAYKIDKYERGTYVVIYFMAPTQLIAELVRNVRITEEIIRFLTVKYENKREISAW
                     DKLSKGQKLMPAKKELKAPEKPVEAE"
     gene            9653..10282
                     /locus_tag="RPW04_001383"
     CDS             9653..10282
                     /locus_tag="RPW04_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDX6295473.1"
                     /translation="MFNKVILVGNLTRDIELRYAQSGSAIGSTGIAVTRKFSGANGEK
                     REETCFIDITFFGRQAEIANQYLNKGSKILVEGRLKFDQWQDQNGNNRSKHSITVESM
                     EMLGSQTQGGFKDSHQDQTNSQYSNTSYSSNYQNPTGYQNDSNMNSGYRGQESFAQKT
                     PKIATNEQPYEEKIPEIDIDSDLPTQSQNRQNKPKQNIDVNIDDEEIPF"
     gene            10295..10555
                     /gene="rpsR"
                     /locus_tag="RPW04_001384"
     CDS             10295..10555
                     /gene="rpsR"
                     /locus_tag="RPW04_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDX6295474.1"
                     /translation="MAEKRKYSKKYCKYTEAKVEFIDYKDTTLLKYCLSERFKIMPRR
                     LTGTSKKYQEMVEKAIKRARHVALIPYIVDRDNVVTNPFEGM"
     gene            complement(10587..11675)
                     /gene="dnaJ"
                     /locus_tag="RPW04_001385"
     CDS             complement(10587..11675)
                     /gene="dnaJ"
                     /locus_tag="RPW04_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDX6295475.1"
                     /translation="MEFDYYEILEVSRDADGETIKKAYRKLALKYHPDRNQGDKEAEE
                     KFKRINEAYEILSDENKRSIYDRYGKDGLSGSGFDDGFDLGDIFSSFFGGDFGGTRSS
                     RNSYKYPLDIEVNITLNFNEAVFGCEKEIKYNYKVPCETCSATGAKDGKKSTCSHCGG
                     RGKISHRQGFMNFVQTCPYCGGTGEIIKDKCLYCSGNGYNETSDNIKINIPEGVDNGN
                     RIRIQGKGNKSSNGGGDLYVRINVRDDEHFVRNGDDVYIEIPVFFTQAMLGETIKIPT
                     LRGESELKLPVGAKDKQQFVLENEGIQNTHTKLKGRLIAQIAINTPKKITDEQKELLE
                     KLQNSFGIKSGESSGDEGIFDKIKSWFK"
BASE COUNT         4197 a         1967 c         1754 g         3832 t
ORIGIN      
        1 tactcaaaca caaaaaataa ctcagctttg atgaatagta ttatttttac ggctcttata
       61 gtagctttta tcagcttgat tatgtttatt atatttttaa gaatagaaaa gcctaaaaaa
      121 ctacagttaa aaaatagatt aaaaataata caagagccat tttatatgga aaaaatacat
      181 agaaaattta tgttatcaaa gccgcagcaa ggcgatatcg tagagaggct tgagctattt
      241 tttaaaatac tccatataaa agctgcaaaa aataataacg tagttatatt taactacgat
      301 ccaaaacagc acagatactt tagcgcggat tttaaaatta tatcatatgc agtgcatatg
      361 ttgacccaat ttgtcataaa tataatttca aactcgtcta tagttcttac tataaaaagt
      421 ataaacgcta cgaacaacgt atacaaagtg actctaaaag caaatacaaa tcttatagaa
      481 atggacaata acatcaaaga tgctttaaaa ggaaaaacaa aaaatataaa ctacaaaaaa
      541 ctagttatag catcagatat agcaaaactt ttaggatcaa aactaagata tcaaagtaaa
      601 tctagcgaat ttgagtttag ttttaatcta cttttaactc ctatacaaaa agacaataat
      661 cataaattta taaatgagta taaaaacgaa ataagcgcta ttatcgccga agacgatata
      721 aattcgttct atacattaac tgcaggatta agacattatg atatcaaaac aaaaccaaat
      781 cacaattggg aaatagtaaa aaagcacatc acagatacta tttttaaacc ggaattagta
      841 ttcatacaag caaaaattat caaaaaatta tcaaaaaatg atattaatgt tttaaaagag
      901 cataaagaga gaaaaaacat cacatttata atactgagca acaactcaag ctatgatgat
      961 gtaaataaac ttttggattt tgaaacattt atattaagac aaccttatac gcaagatgct
     1021 cttttagccg tactgaacag atcgcaacaa gtagctatgg ggggggtatg gcgaatttct
     1081 taggatacaa aacggaaaaa aaactaaagt tttattaagt gcgatataaa aaatgcatcc
     1141 atcgtatcat caggtaaaat tctaattcca aattcacttt ttactacttg ttgtaaattt
     1201 acgtctatag gaagaatttg tattttaaac ttcgaattta atgcattttt tataacttct
     1261 tcattctctt ctttataaaa agtacaggtg ctataaacta tctctccacc actttttaat
     1321 gcatttaaag ctgaatttag tagctgtttt tgaagcttcg atatgttttt tatctctttg
     1381 taagattttt ctttaaagtt ttcattataa caagagtagc tagaacaagg tgcgtcaagt
     1441 aaaattttat cgaatttttc ataacaagtg cgagaaacgc ttcttgcatc tttgttatat
     1501 gtctttaccc attcgcagtt atattttttt aaatttgatt ttaatgtaaa gaagcgattg
     1561 gtatctgatt ccatagtagc cagatagccg tttttttcca taaaatttga tagagctatg
     1621 ctctttcccc caggactagc gcacatatca agaacggttt gaccaggggc tgcatttagc
     1681 gtcaatggag ctaaaaaact acttggattt tgtatataaa ttttaccact gttaaataaa
     1741 tcgcaatgag tcaaaatact tttaaaattt gatttacata tatagaaatt ctcataaaat
     1801 ttagaaaact ccacacctaa aatcttaagt tcgtctaaaa cacttttctc atcggctttt
     1861 aataaattta taaaaaaccc aacatttttt ggcttaaaaa aactattcca cacactactg
     1921 aatttatcgt gcggaactaa atcatataaa tcatctttaa aactcataca aatctcacaa
     1981 aatatttaga tatcttttta aaatcaccat agcggcaatg ctatcaaatc taccgtcttt
     2041 agaatctttt gacagttcgc tagcttcgca gctgctataa gcttcatcaa cataaattat
     2101 ctctgaatca aaaccgacta aagagataaa atgcttaatt cgtctttcca tttcatcctc
     2161 gcagctgccg ccttttggca agccgactac tagttttgtc gcattttttt cttttaacat
     2221 ttttaaagta tctttcgccg cctgattgcg atttttacgt aaaataggtt cgctaggaag
     2281 tacaacagtc ggtaaaaccg caaccgcaac tcctattctt tttagtccga catcgatagc
     2341 tactatcaag ataaaatcct tatatatact ctgtctatag aaattttacc ctccagctcg
     2401 tattcataca aagcgtctcc aaatctcgcg taacactcat caaagttttg atttattttt
     2461 ataaattcca aaacatcgtc tttactcaaa tcactgttta aacttccgaa tttagaagca
     2521 aactcatcaa aatcggctat taaattcgcc ctatttttac taagtagatc atttgttcca
     2581 ttgctctcat taaacctttg aggcaataca aaaagaggaa ttcccatatc caaagcgagt
     2641 cttgcgctag acattgatcc gcttttaata tccgcttctg ctatgatcac ggcgtcgctt
     2701 agagatacga ctattctgtt tctttctaaa aaactccaag gagtcgcaaa agtattaggt
     2761 tcatactcgc taagagccaa tgcgtcttta taaatttttt ctatcatttt tgagttttga
     2821 gccggatata tattattaag tccatttcca aagactgcga tggtatttgg aaaagcgcct
     2881 tcgtgagcat gtatatcggt acctatagcc gctccgctaa ctacgcaaat accgtaattt
     2941 ttaagagtag aggctaaact caaaacaata ttttttgtat aagaagtaca ttttctcgag
     3001 ccgactatcg ctactttggg gaaatttaag agttctaaat ttcctttata atatagttta
     3061 tttacaggtt tttttagctt ttttaagctt aaaatatcag ttataaagtc cataaatatc
     3121 ttttaaatat actacttcta catcttttaa aatagttttt ttagcaactt taatagtttc
     3181 aaaagttacc ttataaggat gacctattgc tatagcaaaa ccatttttct ttgctttttt
     3241 tatagctatt tcaagctgtt taaatatagc aacactactt tgatcattat ctataaacac
     3301 atctctaaaa acgtatttaa gtcccatttc tttagtgact tgtttagctt tagaaccttt
     3361 tgaagtaaga ctatcgacaa ataaaatatt atgatttttc atggatttta aaagcatttt
     3421 catagacgag taatcacttg taaatttgct tccggtatga ttgtttatat aagatacatt
     3481 cccaaactgc ttttttatag ttgatattct attttctatc ttatctttcg tatcgcctac
     3541 atttaacgta ttttgctcat ttttcttgaa aaatatcgct tctaaaggca aatgaaccat
     3601 ataaaactca aactgttttg agatctttac gctatctgga taaaaatctg tcggcggaaa
     3661 aatagacgga gttatcttaa gccctaaaga ctttatatct cttgcttgag ccattgtgga
     3721 aagatcatcg attatgataa caagctttgg cttttcaaat ttatgaatat cttgtttttt
     3781 cactattttt tcgatatttt tttgttcata ttttaaactc gaatttgaac tattttcatc
     3841 cagttttgaa gtaatatttt gatcaacgaa catagatatt tcttttttca aattcggctt
     3901 taaaggcgaa acgatctgtt cttttggcaa tgcaacagtt atatttttat cggaatctga
     3961 gatattgcta tctactttaa atttcaaagt ttcaaaaagc tcggaaatat ttttatcttt
     4021 ttttaaattt ggtctgttga acgatatatt tttatcttta gaaatttcat ttttttgcgt
     4081 atctaagtaa cgctctatct tttttatcgt cttttgacta tctaaatttg gatctttttt
     4141 agagcctgaa acagcataaa ttacgccaaa aatcgcaagc aaacaaacag ctataccgat
     4201 ataaactaaa aaagcccctt ttttagtttt aggggctttt tttctcgacc tctttgccaa
     4261 ttaatttttg tctttattaa ctaatctgcc tttatttatc caaggcatca taccgcgaag
     4321 tttttcgcct gttttattaa gcagacttgc ttcgctaatt tttctctcag cattcatttt
     4381 agtatatcca gcttttcttt ctaaaataaa gtttttcgca aaagtaccgt cttggatctc
     4441 ttttaatata gccttcatag cagctttact actttcattt actactctta ctccacttac
     4501 ataatcccca tactcagcag tatttgatat agagtatctc atatcggcca taccgccttg
     4561 atagattaaa tcaactataa gtttcatctc atgcaaacat tcaaaatacg ccatttcagg
     4621 ctcatatccg gcttcggtaa gagtttcaaa tccagcattt ataagagcac aaagtccgcc
     4681 gcaaagaacg gcttgctcac cgaacaaatc agtttccgtt tcagctttaa acgtagtttc
     4741 tatgatgcct gttcttccac cgcctattgc gcttgcataa cttaaagcta gatcttttgc
     4801 tttgccagtc gcatcttgag aaacagctat aagatcagga attcctccac catttacaaa
     4861 ctcgtttcta acagtatggc ccggagcttt tggagctatc attatgcaat cgataccttt
     4921 tgggggaatg atttgaccgt aatgtatatt aaaaccgtgt ccgaaagcta tggcgttgcc
     4981 ctcgcttaag tttggctcta tttcagcttt aaaaatatcg gcttgaaact catcaggagt
     5041 taaaatcatt ataagatcgg catattttgt agcctcgctt acgctcatta ctttaaagcc
     5101 tttagcttct gcttttgccc agcttttacc ttttggattt aaacctacaa cgacatcaac
     5161 gccactatct cttagatttt cagcgtgggc gtgaccttga gatccaaaac ctatcatagc
     5221 aacttttttt gatctaatta agcttaaatc gcaatctttg tcgtaataaa ctgttatcgc
     5281 cataactttt ccttttttaa aatttattta ggaattatac tactgtagaa atttaaaatc
     5341 actgaaattt aaaaaaatta tttaaattta agtgatttaa aaagccaagt gttgtaaaat
     5401 atacaaaatt aaaatttccg agaagaaaaa tgaatcaagc aatatataaa agcataaaaa
     5461 ctttaccgcc acttgatgat acgattgtaa gaatacaaca aatctgtaac gatgaaaata
     5521 gcgatatcaa tgagcttata acagttatac aaaaagatcc tatgctaaca gcaaatatat
     5581 tgcgttctgc caatagcccg ctttatggat ttagccgaga gataacagat ataaatagag
     5641 cagttacgct ttttggtatg gctactataa gaggtttcgc gctttgcgga gcgattaaaa
     5701 aatctttttc tatagatcta tctccttata acataaaaga tagccaattt atggagattg
     5761 ctacaactca aaacgctctt gcatttaact ggtacagcaa gatagataga gagcttttaa
     5821 acatactctc tcctgctagt tttatgatgg aaataggaaa aatagttata gcaaaagaaa
     5881 ttttggaaaa tgataaaaat gctgctttta aagatgcttt aacacacatt agcactccat
     5941 cagaactatc tgatttagaa atagatatgg taggaatttc aaatgaggaa gttacggtaa
     6001 aaatatttga acagtggaat ttagaaacag aaatgataga tgctatacta tactcaaata
     6061 gtccagatga tgctccaaat catataagag catcatctat agcacttaaa attataaaaa
     6121 atagcgttaa tatatttggc atattaagcg atgagaatat acaaagcaca ttaacacttc
     6181 ttgatactta tggattagaa caagctaaat ttatagatgc ggttaaaaaa gtaaaagggt
     6241 gaaagagttt ttaaacgccc ttgtaaacgg cgtagatgat aaatttataa aaatagacga
     6301 acgagaaatt ctgcgcgtac tagaacagat aaaagctgtt aaaaagcata aaaacaaata
     6361 ttacctaaac gatggatatg tctgcggtaa gcttgatata agtagtggag gcacaggatt
     6421 tttgatgcca tacgatgtgc gttttaaaca agatataata atagaaaatc gagatttaaa
     6481 cggtgctcat tttggagata tagtactatc aaaattaaca aaatctaaaa aatccagact
     6541 acacgcaacc atgatagcgg ttttggctat ggcaaatgaa acaagcgtag tttatactaa
     6601 gcaattcggt caagtcataa tgggagtaag catcccaaat tctcttacta tagcacttaa
     6661 agccagccaa aaatcattaa aagaactacc aataggaact gttttaaaaa tcaacaatct
     6721 agataatgat ataacagaag ttttaggcgt attaagcgat ccatcagtag atgaaaaaat
     6781 atcattagca atctacaata aaaaaaatct tttccccaaa atatgcgaaa acgaagcaaa
     6841 aagttttgga gataacgtag ataaaagtat gtatcccaat agagtagatt taacaaattt
     6901 accgttttgc acgatagatc cggttgatgc aaaagatttt gacgatgcta tttattatga
     6961 cgtaaaaaat cgaaccgtat atgtagctat agccgatgtt agcgaatacg tagccgctta
     7021 tagcggtata gataaagagg ctaaatttag aggattttca atctattttc ctcatatcgc
     7081 cattcctatg ttgccaagat cacttagtga aaatatctgc tctttaaaac caaattgcga
     7141 taggttggct tttgtattta aaatatcttt agatgagaat ttagagtcta taaaagagga
     7201 actttttgaa gctgttattc actctagaaa acggtttaat tatgatgaag tagatgaaat
     7261 tttagcttta aatttaaaaa cagatgatga gatacaagag tggattttgc cgctatttga
     7321 gactgctaaa aagctgaaat ttaaaagatt acaaaacgga tttgatttta gaagcaaaga
     7381 gcttagaatg agtatttcta caaatggaga tatcttaaaa acaacgtatg aaaaagagac
     7441 tccttctcac tctcttatag aagattgtat gcttttagca aataaagccg ctgcaaaaag
     7501 aataaatcac ggtatattta gaaaccacgc tccagccgat cttaaaaaaa taaacacgct
     7561 tttagatgat ctagcagctc ttggcataga aattacttat gaaagtgatt tagtagcgct
     7621 aatatctaaa atccaaactc aagcagatag tttaaatatc agagaagatg ttgataaact
     7681 catcataaaa gcacaaaaaa gagcagaata tgcaagtaag cctaccggac attttggttt
     7741 aggatttgat ctgtattctc attttacaag tccgattaga cgttattctg atcttatttt
     7801 acatagactt ttaaaagcaa atttagagaa taatgcgaaa ctttttaact atctcctttt
     7861 ggatatagaa ggagtttgca ggggattaaa cgaacttgaa cgtgaagccg atagagtagc
     7921 gtgggatttt atggatagaa aatttgcaag atgggctaca aataatatca ataaagtatt
     7981 tcgctgctac ataagcgaag ttggcaacca aacaatagct aaattagacg atgaaataaa
     8041 aggagctaga atatacatag aaaactttac ttgttcactt cttgcttctg ttatggtgca
     8101 gataaaagaa gtagatatac caagtgcaaa aattatagga aaagtagtac aaaaactaga
     8161 tgtataaaaa agagtttcaa aatctgctaa attctaatag attgccaaac tattttttgc
     8221 tttttgggaa tgaagagtat caagtagaaa tttttgctaa agagttgatt tctaaattta
     8281 aaagtgaaaa tttacttagt ttgtattttg acgaatatga ttttatcagc gcaaagtcgc
     8341 acttaatgga gtcgtcgtta ttttgcgatt caagtacgct gcatataaaa acagataaaa
     8401 aaataccggc aaaagagtta aaatacctga tagatctgtg caaaaaaaat acaaataatg
     8461 catttatata tgagctgcat gaaggtgata tgaaaacaat ttttgatact aaaaaggcat
     8521 ttggtgaaaa ttttgttagg tttttttcgc caaatactcc ggctgaaggc gttagtttgc
     8581 ttatgtatca cgctgaaaaa ctgggattaa acatacaaac atccgcactt tatcaaattt
     8641 acagtttgca aaatgaaagt ttatatcttg ctagcagtga attaaataag ctcgcaaatt
     8701 taactaaaac tatcaatgac gatagcgtaa aaaagttagt ttttagttta aacggaatta
     8761 gttttgaact attttttaat aaacttatct ctttgcaaaa cataaaagat gattatttta
     8821 gctatacgaa tgattctaat ttcaatgaaa ttgcactgat aaactcactg tattcatctt
     8881 tttttagact atttaagata caaacttatg ttaaaatcaa cggtaaattt gatatagaaa
     8941 aagccatagg atatactccg cctccgacta ttttaaacca gataaaatca caagctctta
     9001 gcataaaaac agagttatat atggatattt ttatgaaatt aaactctata gagtatgata
     9061 taaaaacaaa aaaagatata gataaagaat gttttttact atcatctatt ttatctatac
     9121 aaaatttaat tgcaaaaaac agcaaatctt aagcaagact ttggtattat aataagctgc
     9181 attttatgca caaatccttg ctctttgaat taccaaaaag agctaaaatc cataaggaga
     9241 acgaatgaaa cattatgagc ttttattcat cttaaagcca acattgactg aagatgaagc
     9301 taaagttaaa gtcgacttca taaaagaagt tatcacaaaa aacggcggcg agatcgctag
     9361 cgtaatagag atgggaactc gcaaacttgc ttataaaata gacaagtatg aaagaggaac
     9421 ttacgtagtt atatacttta tggctcctac tcaattaatc gctgaacttg taagaaacgt
     9481 aagaatcact gaagagatta taagattctt aactgtaaaa tatgaaaaca aaagagagat
     9541 atcagcttgg gacaagctaa gcaaaggtca aaaactaatg cctgctaaaa aagagctaaa
     9601 agccccggaa aaaccggttg aagcagaata ataatcacta aaaggttgca aaatgtttaa
     9661 taaagtcatt ttagtcggta atttaacaag agatattgaa ctaagatatg ctcaaagcgg
     9721 atctgctatt ggtagcacag gtatagccgt gacccgtaaa tttagtggtg caaacggtga
     9781 aaaacgtgaa gagacatgct ttattgacat tacatttttt ggtagacaag ctgaaatagc
     9841 aaatcaatac ttaaacaaag gaagtaaaat acttgttgaa ggaagattaa aatttgatca
     9901 gtggcaagac caaaatggaa acaaccgctc aaaacatagc ataaccgtag aaagtatgga
     9961 gatgttagga agtcagacac aaggcggatt taaagattct catcaagacc aaacaaatag
    10021 ccaatactct aatacaagct attcaagtaa ctaccaaaat cctactggat accaaaatga
    10081 tagcaatatg aatagcggtt atagagggca agagtcgttt gctcaaaaaa caccaaaaat
    10141 agctacgaac gagcagcctt atgaggagaa aatcccagag attgatatcg acagcgattt
    10201 acctacccaa agccaaaatc gccaaaataa accaaaacaa aatatcgatg tcaatataga
    10261 tgatgaagaa attccatttt aaaaggacaa tataatggca gaaaaaagaa aatatagtaa
    10321 aaaatactgc aaatacacag aagctaaggt tgaatttata gattacaaag atacaactct
    10381 tttaaaatac tgcttatcag agagatttaa aattatgcct agacgtttaa ctggtacaag
    10441 caaaaaatat caagaaatgg tagaaaaagc tataaaaaga gcaagacacg ttgctttaat
    10501 accttatata gtggatcgtg acaacgtagt tacaaaccct tttgaaggca tgtaaaacat
    10561 aaaagttttg gtctttatga ccaaaactac ttaaaccaac tttttatctt atcaaaaata
    10621 ccctcatcgc ctgaactttc accacttttt ataccaaaac tattttgaag tttttctaat
    10681 aactcttttt gttcatcagt tatttttttt ggagtattta tagctatctg cgctatgagt
    10741 ctgcccttta attttgtatg agtattttgt attccttcat tttcaagcac aaattgctgt
    10801 ttatctttag ccccaactgg aagtttgagc tcgctttctc ctcttaaggt tggtattttt
    10861 atagtttcac caagcatggc ttgagtaaaa aataccggaa tttctatata aacatcatct
    10921 ccatttctaa caaaatgctc atcatctctt acgtttattc ttacgtaaag atctccgccg
    10981 ccattagaag atttattgcc tttgccttga atgcgtattc gatttccatt atcaacgcct
    11041 tctggaatat ttattttgat attatcgcta gtttcattgt atccatttcc agagcagtat
    11101 aaacatttat cttttataat ctctccggtt ccaccgcaat aaggacaagt ctgaacaaaa
    11161 ttcataaatc cttgcctatg acttatcttt ccacgtccac cgcaatgtga gcaagttgat
    11221 tttttaccat ctttagctcc agtagcactg caagtttcgc aaggcacttt atagttgtat
    11281 tttatctctt tttcacagcc aaaaacagct tcattaaaat tcaaagtaat atttacttct
    11341 atatctaatg ggtatttgta gctatttcta gaacttcttg ttccaccaaa atcaccgccg
    11401 aaaaatgaac taaaaatatc tcccagatca aatccatcat caaatccgct gccgcttaaa
    11461 ccatcttttc catatctatc ataaatacta cgtttatttt catcgcttaa aatttcataa
    11521 gcttcattta tacgtttaaa cttttcttcg gcttctttat cgccttgatt tctatctgga
    11581 tgatatttta gcgcaagttt tctatatgct ttttttatag tttcaccatc agcatctctt
    11641 gaaacttcta aaatttcata gtaatcaaac tccaaaccgt ttccttttaa ttaaaatttt
    11701 aaccaagtat tctatctaaa aaataataaa tttatcccta aatttaaaaa
//
LOCUS       DAPPKW010000060        11247 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.060, whole genome shotgun sequence.
ACCESSION   DAPPKW010000060 DAPPKW010000000
VERSION     DAPPKW010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11247
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.060"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            33..602
                     /locus_tag="RPW04_001386"
     CDS             33..602
                     /locus_tag="RPW04_001386"
                     /inference="COORDINATES: protein motif:HMM:NF024880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDX6295476.1"
                     /translation="MDKREILEICITEYMKKHSSRPAYCEYLRTKKYAYEMILKNFKG
                     KNVLELGSDGAATSAILARWSENLDIVDMNDKISHLIEEDPYLKKAKFIKSLWQDFKP
                     QNLYSDILLTDSLEHIKDGSELLSIIKNWLSSDGFLHIVVPNALSLHRLIGVKMGFLN
                     SPYEFNENDISSGHEKVYDFDTLKSDILK"
     gene            621..758
                     /locus_tag="RPW04_001387"
     CDS             621..758
                     /locus_tag="RPW04_001387"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295477.1"
                     /translation="MEGVQLKPLTDSQLTAFKPEFKDALSSLSSLLPRNSAEIYAVCG
                     I"
     gene            755..1831
                     /locus_tag="RPW04_001388"
     CDS             755..1831
                     /locus_tag="RPW04_001388"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012744.1,HMM:NF024831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDX6295478.1"
                     /translation="MRTVAIFTQNLSAGGVQKSVITLANHFKNIFKIVIILCESDKDE
                     FYKFENILKINSVKIDINKSSIGQWLIEYRTNELDKILSKLKPDLLISFEDYNNIIAL
                     KTKFKCKKIISSRVSFSGNYDNKIHLLDKNFYIKNIKNLYSNADYVICVSKFIQKELM
                     DLGIKAYHIYNGITINPKINNPKKNFIINLGRLHPQKGQKDLIKAYSLIKDDIKEDLF
                     IIGDGVLKLELQSLIQSLNLENRVKLTGFINPKDYINECKMAIMPSYYEGFSNSVLEI
                     MAAKKAVLAYDYDGADEIFDKNDLIKKGDIAALSLKLKEILNSPQILNDLETKQWEKV
                     KEFDIKTTMQQYENLIAKVLKCAE"
     gene            1819..3570
                     /gene="asnB"
                     /locus_tag="RPW04_001389"
     CDS             1819..3570
                     /gene="asnB"
                     /locus_tag="RPW04_001389"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HDX6295479.1"
                     /translation="MCGIIGINSKNKNLQKALNLLKDRGPDNSGIYRAKNATLGHTRL
                     SIIDLSSCGSQPMKKDNLTIVFNGEIYNYKELANSENISITSDTQILLHMYQKYGKGF
                     LNKLNGMFAFVIYDERDNSFFGARDTFGKKPLFYYNYGGNFIFSSRINAILELLDFTP
                     EPNLDAIDSYLSFMSPTKTQTFYKNIFKIEAGSAFTYKNGELNSYKFETLDDIKTQNI
                     NFDEAKNKVLNLLKTSLEIRLRSDVPVSFLLSGGLDSSLLCALYAKEYGNNFDTFSLG
                     FNEYKTYDETSWANNVAKYIGSNHHRIELGKKDFFDIFEKFYDFVDEPLADSATIPTY
                     FLSKKIHENGYKVALSGEGSDECFMGYDLYFRVLEFYQKNLNKESYPLISKDYEYLRR
                     KELNLPIYGSAGEVFTKYQKENLLKNQTIYEQLSYYKNGYDGLKQMSYIDFKIWVSEV
                     LTTKIDRASMANSLEIRSPFLDINLVKFSLSIPDRIKFKTTNKEILKSIAYNYLPKET
                     IERKKRGFSSPFIEWVIDEMGDNIVNEILSINKFIPLFNEDFVKILYQKAIGGRFKQH
                     LWTLLHLAIWLKKRYKI"
     gene            3567..4637
                     /locus_tag="RPW04_001390"
     CDS             3567..4637
                     /locus_tag="RPW04_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014770578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF354 domain-containing protein"
                     /protein_id="HDX6295480.1"
                     /translation="MIWFDLVTPKSVMFFKPLIKKFESMGREVLITARESLGYDEVAA
                     LLRLHGIKFTNRGGFGGESLHGKLKASLNRQNELMEFIAEKNIEKLVCLCSVDANRVA
                     FGLGIPIINFYDIPLSDYNTDFTKALPQARLTLPLSNRAFRPFMVPNEIFLRFGLEDK
                     QIFEYPFLDVVAWLKDFKPDREFFDNFLNLHGLDTNLPTIVVREEEFKASYVKAKFPI
                     LYDGLDSIKDKINANIIIIPRYESLPLKDMFPYACVIDKKIEVQHLLAFSDLFIGGGG
                     TLNSESCYFGTPTISTRSFISHYDKWLMDKGLMQKADSVNELVNIALSITSKRNETSK
                     AIFGDMQFNIDQISKAILDDSI"
     gene            4624..5277
                     /locus_tag="RPW04_001391"
     CDS             4624..5277
                     /locus_tag="RPW04_001391"
                     /inference="COORDINATES: protein motif:HMM:NF013742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDX6295481.1"
                     /translation="MTLFEDILQQINARRDELFVRADEFVFNDYGAGARDENRSPEMM
                     DIGVKCTKTLKDFAYIGVKNENAKLLFDTIRDLKPKIILELGCCLGFSSILFKAAFNK
                     ASIYTLEGDLNLANFAKENFDFFKFNDIKIVVGKFSDTLPKLLPKIDKIDFAFIDGHH
                     DKNATIGYFEQILPFMNEGSVIAFDDINYNRNMTRAWDVIKQNKNSKDDGKIGIIWL"
     gene            5268..6656
                     /locus_tag="RPW04_001392"
     CDS             5268..6656
                     /locus_tag="RPW04_001392"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295482.1"
                     /translation="MAIKVYIYKNGYYEQNLHYVLKWLSDIYNNIILLGYINKSSEII
                     DKTAFILYIDKKPNLKNINLKNAHLFTIKLLLSTLKKDNIDDYKDEDLAFNKALQISL
                     FFSEIFQPKKPKFKKLMRICDNALNKINSHYINKMGKKIFDVGILYHKRDYKSHTYGI
                     ADNINKLNLKIIYCISSIDGSCPDEYKSLNPKVCLPWHILHHLSICKVFVTPSAGVFT
                     RGNSKKFFISHAFLSGMNPECFKKLECTLSISSTIALEYLKKYGLDKYKVKLAKVGYP
                     SLDCKLSQIKNIPKNPKNIFLSIDNNALIYESIEPLIKSLLDNNETIIFRPKPQHISN
                     NLNTNFISKFKKYTNFIIDRKDVVDMDELLNCFLLISDYGSMLFTFAFATNRPALIFD
                     PKKYYLKSSNPFYNKNLHLIAYDLDTGLKAVQEAKYADTKKIKNYLKTVIYNLGKSSE
                     AIAKEIEGLTIE"
     gene            6649..8094
                     /locus_tag="RPW04_001393"
     CDS             6649..8094
                     /locus_tag="RPW04_001393"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295483.1"
                     /translation="MNKIYIYPNNEDAFYAKYILTELIDKYGLKAEFISILDDNIPGH
                     EISKISPNKNSFILISCFDKVLFKKLFDNAKGFKRYDFTTFISSFFNKILNLNELNDI
                     NYLLKSSVLRLALFFISFFKNRSNAYKMLNANLENLVSKLSSYYIKMLGEKPDVIYFL
                     SSFANSKHLGNIDKFMKQNGLKIAYFVDENDASGGGMFKNLNPIIAPFYYMLNTNICK
                     IFISTHTVCMSLKSSHKKLIVPHAFIYPIASLAQRKRPLDEHFFNKLARNNNLIVCAS
                     TKSNYKILKTAFKNRCLKAGYPMFDLLPNLNSKTQDPKNKILLAINNTEFLYIFKEQV
                     EKLLNKFQVILRPHPAQIFDKEFLNLKKELENHPNFFYDDNKNVINPLTNSTFCCFSD
                     TSSLSYTYAITFKNPVILCVQQTQKYEDISFFDKRLHILYNGDMVKSARKAFEFDNSL
                     VDKYIKDEMYNYQNSSKFIAEFITRKIKENR"
     gene            8091..8255
                     /locus_tag="RPW04_001394"
     CDS             8091..8255
                     /locus_tag="RPW04_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295484.1"
                     /translation="MTKHYFIYPNGGHSKMLAHNLDLLGHSYTFLDDFKESMSLESNL
                     KFIKDNGGGR"
     gene            8252..9487
                     /locus_tag="RPW04_001395"
     CDS             8252..9487
                     /locus_tag="RPW04_001395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295485.1"
                     /translation="MSNPILLACDSLCQESIELKDKLRTKVENLGLACEDGFIYIMDE
                     LNSYIKSATNPKNKTLGLHMYGRVDKRYSSLYLNSISGKLNIVYIFSTYDELNNNKSL
                     NNTFAMPFEHIKYLNSLQIILSTTNKTSDGKILLSLNHKIIVMAHAYTFPNGYLAYDD
                     INSKYKKCAIKFNINENMPYILVSSKTNYQMAMDYFKELYGYETNKFIKAGYPPLDEN
                     IKNYEAIKKQTPDTILLATRSKRVLHLLKPVASKLLNLGYKLHFRPHPQDCGHKEFQD
                     FASEFENIENFTIDMNYKGIKQSKFSMDTLSKMICIVTDYSSFAYTLPITNLRPAILF
                     YPDTILQKCLEEKINNKIYKFNDDRLHIVAKTGNEVLYAVQNLNLEEWEKKILDYRND
                     EIYNIKNSSKFIAEFITNL"
     gene            9498..10856
                     /locus_tag="RPW04_001396"
     CDS             9498..10856
                     /locus_tag="RPW04_001396"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HDX6295486.1"
                     /translation="MRILIYAYGFIGKNNYEFMKQFFDEVYVYDDMLNMSGLSKHFIK
                     NLDSEIKFDIILVSVADKKLYKNIKNKLSAHFESNIIKFAPIILTKPSDLFLNFIADK
                     FDKKLIENYNLDNIIKHIEQLKDQYREFRINFDRSALQKREDFDLKCPNLDIFQKIYK
                     TGKILPKCKTISYPGFNVMFSSGCDERSFYFKDKIDFEKLQNRDKKLVIVFGNCGLRA
                     DYLDEIGGGNIVQYLQKYLPNYTVLNLGINGSTLFEQINIYNALFYTIKPEFVLTVFG
                     GAEYIEAFVQDQILLKRHSIIYAAMNNETTAKELYKSDLPIHSDFVYTIKKRFNPENS
                     AICKALYERLIQFYNIVNSNNGKFIALLQPFAIKKINLDEDEKTILLKDSLDEIIARE
                     ADEFIDEFNKTTKNLSYYFDLNKCLCDEINRCFYGTSLHYTPYASEKIAKFISKKIEE
                     IK"
     gene            10853..>11247
                     /locus_tag="RPW04_001397"
     CDS             10853..>11247
                     /locus_tag="RPW04_001397"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295487.1"
                     /translation="MRILIYAYGFIGKNNYEFMKQFVDEVYVYDDMLSELNYQKQFIK
                     TLKNSKFDSILVSVANKNTYKNIKDNLSEIFPENIIHFAPIFMEKPSDLFLNFISNKF
                     DLNLIKNFDLEKIQNRLKELKTIYFEFRA"
BASE COUNT         4386 a         1576 c         1799 g         3486 t
ORIGIN      
        1 aattttatat tagaaaagtt aaaggaaaag tagtggataa aagagaaatt ttagaaattt
       61 gcatcaccga atatatgaaa aaacatagct caagacccgc ctactgcgag tacttacgta
      121 caaaaaaata cgcctatgaa atgatactaa aaaacttcaa gggcaaaaat gttctagagc
      181 taggcagtga cggagctgct acatcggcga tcttggctag atggagcgaa aatctcgata
      241 tagtggatat gaatgacaaa atttcacatc tgatagaaga agatccgtat cttaaaaaag
      301 ctaaatttat aaaatctctt tggcaagatt tcaagccgca aaatttatat agcgatatac
      361 tactcactga tagtttagaa catataaaag atggtagtga gctgctatct atcattaaaa
      421 attggctaag ttcggatgga tttttacaca ttgtagttcc aaatgcgctt tccttacata
      481 ggctaatcgg tgtaaaaatg ggttttttaa attctcctta tgaattcaat gaaaacgata
      541 tttcaagcgg ccatgaaaaa gtgtatgact ttgatacttt aaaaagcgat attttaaaat
      601 aagggttaaa actaatcagt atggaaggag tacagctaaa accgcttacc gattctcaac
      661 ttacagcatt taagccggaa tttaaagatg ccttaagctc acttagctca ctgcttccaa
      721 gaaattcggc cgaaatttat gcggtttgcg gcatatgaga accgtagcta tatttacgca
      781 aaatctaagt gctggaggcg ttcaaaaatc ggttataaca ttagcgaatc attttaaaaa
      841 tatatttaaa atagttatta ttttatgcga aagcgacaaa gacgaatttt ataaatttga
      901 aaatatttta aagataaata gcgtaaaaat agatattaat aagtctagta tcgggcagtg
      961 gcttattgaa tacagaacca atgaacttga taaaatacta tcaaaattaa aaccggattt
     1021 gcttatatca tttgaggatt ataataatat aatcgcttta aaaactaaat ttaaatgcaa
     1081 aaagattatc tcttcgagag ttagtttttc aggtaattat gacaacaaaa ttcatctttt
     1141 agataaaaat ttctatataa aaaatataaa aaatctctat tcaaatgccg attatgtcat
     1201 atgcgtaagc aaatttatac aaaaagagtt gatggattta ggtataaaag cttatcatat
     1261 ttacaatgga attactataa atccaaaaat aaacaatcct aagaagaact tcatcataaa
     1321 cttaggtcgt ctacatcctc aaaaaggtca aaaagatctt ataaaagctt actcactcat
     1381 aaaagacgat ataaaagagg acctttttat aataggtgac ggtgtactaa agctagaact
     1441 gcaaagctta atccaaagtc taaatttaga aaacagagtg aaattaacag gttttatcaa
     1501 cccaaaagac tacataaatg agtgcaaaat ggcgataatg ccaagctatt atgaaggatt
     1561 ttcaaactcg gttttagaga taatggctgc aaaaaaagcc gttttggcgt atgattatga
     1621 cggcgcagat gagatatttg ataaaaatga tttgataaaa aaaggcgata tagctgcatt
     1681 atcattaaaa ttaaaagaaa ttttaaactc gcctcaaatt ttaaacgatt tagaaactaa
     1741 acagtgggaa aaagtaaagg aattcgatat aaaaactaca atgcaacaat acgaaaattt
     1801 aatagccaaa gtcttaaaat gtgcggaata atcggtataa actctaaaaa caaaaacttg
     1861 caaaaggctc tgaatttact caaagacaga ggtcctgata acagcggaat ttacagagca
     1921 aaaaatgcta ctttaggtca cacaagactt agtataatcg accttagctc ttgtggatct
     1981 cagccgatga aaaaagataa cttaaccata gtttttaacg gtgaaattta caactacaaa
     2041 gaattggcaa atagtgaaaa tataagtatt acaagcgata cgcaaatctt gcttcatatg
     2101 tatcaaaagt atggaaaagg atttttaaat aaactaaatg gaatgtttgc ttttgtgata
     2161 tacgatgagc gcgataatag cttttttggt gccagagata cattcggtaa aaaacctctg
     2221 ttttattata attatggcgg gaattttata ttttccagcc gtataaatgc tattttagaa
     2281 ctgcttgatt ttactccgga gccaaatttg gatgcgattg atagctatct tagttttatg
     2341 agtccaacta aaacacaaac tttttataaa aatatattta agatagaagc aggaagcgca
     2401 tttacataca aaaacggcga gttaaatagt tataaatttg aaacgttaga tgacattaaa
     2461 acgcaaaata taaattttga tgaagctaaa aataaagttt taaatttact taaaacttca
     2521 cttgaaattc gacttagaag tgatgttcct gtatcgtttt tgctctcagg aggacttgat
     2581 agctcacttc tatgtgctct atatgcaaaa gagtacggca ataattttga tacatttagc
     2641 cttggattta atgagtacaa gacttacgat gagacaagct gggcaaataa cgtagccaaa
     2701 tatataggtt ctaatcatca tagaatcgag cttgggaaaa aagatttttt tgatatattt
     2761 gagaaatttt acgattttgt tgatgagcct ttggctgact ctgcgactat cccaacatat
     2821 tttttgagca aaaaaataca tgaaaatgga tacaaagtag cattgagtgg cgagggtagc
     2881 gatgagtgtt ttatgggata tgatctatat tttagagttc ttgagtttta ccaaaaaaat
     2941 ctcaacaaag agagttatcc gcttatcagt aaagattatg aatacctgcg cagaaaagag
     3001 ttaaacttgc ctatttacgg ctcagccgga gaggttttta cgaaatacca aaaagaaaac
     3061 ttgttgaaaa atcaaactat ttacgaacaa ctttcttatt ataaaaacgg ctatgatggt
     3121 ctaaaacaga tgagttatat tgattttaaa atatgggtta gtgaggtttt aactactaaa
     3181 atcgatcgag ccagcatggc aaattctctt gaaattcgct caccgtttct cgatataaac
     3241 ttagtcaaat ttagtcttag cataccagat aggatcaaat ttaaaacaac aaataaagaa
     3301 attctaaaat ctatcgcata caattatctt ccaaaagaga ctatagaacg caagaaaaga
     3361 ggttttagct ctccatttat agagtgggta atagacgaaa tgggtgataa tatagtaaat
     3421 gaaattttaa gcataaataa atttatacct ttatttaatg aagattttgt taaaatactc
     3481 taccaaaaag ccattggcgg tagatttaaa cagcatttat ggacactttt acatcttgct
     3541 atttggctaa aaaaaaggta caaaatatga tatggtttga tcttgttact ccaaaatcgg
     3601 ttatgttttt taaaccgctt ataaaaaaat ttgaaagcat ggggcgcgaa gtattaatca
     3661 ccgctagaga aagtttggga tatgatgaag tagcggcact tttaaggctg catggtatta
     3721 aattcacaaa tcgaggaggc tttggtggtg aaagtctgca tggaaaacta aaagctagtt
     3781 taaataggca aaatgaactt atggagttta tagcagagaa aaatatagaa aaattagtct
     3841 gcctttgtag cgtagatgct aaccgcgtag catttgggct tggtattccg ataataaatt
     3901 tttatgatat tccgctatct gactataaca cagactttac aaaagctctt cctcaagctc
     3961 gtcttacttt acctctatca aatcgtgcat ttcgtccatt tatggtgcca aacgagatat
     4021 ttttacgatt tgggcttgag gataaacaga tttttgaata tccgttttta gatgtcgtag
     4081 cgtggttaaa agattttaag ccagatagag aattttttga taatttttta aatttgcatg
     4141 gacttgatac aaatttacca actatcgtag taagagaaga ggagtttaaa gcatcatatg
     4201 taaaagcaaa atttcctata ctttatgacg gattagatag tataaaagat aaaataaatg
     4261 caaatataat tataattccc cgttacgaaa gtctgccttt aaaagatatg tttccgtatg
     4321 cttgcgtgat cgataaaaag atagaagttc agcatctgct ggcatttagt gatcttttca
     4381 taggcggagg cggaacactt aactcagaaa gctgctactt tggaacgcct acgatatcaa
     4441 ctagaagttt tataagccac tacgataaat ggctgatgga taagggtctt atgcaaaaag
     4501 cggattcggt aaatgaacta gtaaatatcg cacttagcat aacgtctaaa agaaatgaaa
     4561 catctaaggc gatatttggt gatatgcaat tcaatataga tcaaatttca aaggctattt
     4621 tagatgactc tatttgaaga tattttgcaa caaataaatg ctaggagaga cgagcttttt
     4681 gttcgcgccg atgagtttgt gtttaatgat tatggtgccg gggcaagaga tgaaaataga
     4741 agtcctgaaa tgatggatat aggtgtgaaa tgcacaaaaa cactaaaaga ttttgcatat
     4801 atcggtgtaa aaaatgagaa tgcaaaactg ctttttgaca caattagaga tttaaaacca
     4861 aagatcattt tggagcttgg atgctgtctt ggattttcta gtattttatt taaagctgcg
     4921 tttaataaag caagtattta tactcttgaa ggagatctga acttagcgaa ttttgctaaa
     4981 gaaaactttg atttttttaa atttaacgat ataaaaatag ttgtaggtaa atttagcgac
     5041 actttgccta aactgcttcc aaaaatagac aaaatagact ttgcatttat agatggtcat
     5101 cacgataaaa atgctactat agggtatttt gaacaaattt taccatttat gaatgaaggc
     5161 tcagtaatag cattcgatga tataaattat aatagaaata tgactagagc atgggatgtt
     5221 ataaaacaaa ataaaaatag taaagatgac ggtaaaatag ggattatatg gctataaaag
     5281 tctatatcta caaaaacgga tattatgaac aaaatctaca ttatgtctta aaatggctta
     5341 gcgatattta taataatata atattgctgg gatatataaa taaatctagt gaaattatag
     5401 ataaaacagc ttttatacta tatatagata aaaaaccgaa tttgaaaaat ataaatttga
     5461 aaaatgcgca tctatttaca ataaaacttc tcttaagtac ccttaaaaaa gataatatag
     5521 atgactataa agatgaggat ttagcgttta ataaagccct acaaataagc ctattcttta
     5581 gtgaaatttt ccagcccaaa aagcctaaat ttaaaaaact tatgcgtatt tgcgataatg
     5641 ccttaaataa aataaacagc cactacataa ataaaatggg taaaaagata tttgacgtgg
     5701 gaattttata tcacaaaaga gattacaaaa gccatactta tggtatcgct gacaatataa
     5761 ataaattaaa tttaaaaata atttactgca taagcagcat tgatggaagc tgtccggatg
     5821 agtacaaaag tttaaatcct aaagtttgtt tgccgtggca tatactgcat catttatcga
     5881 tttgtaaagt ttttgtaacg ccaagcgcag gagtatttac aagaggtaac tcaaaaaagt
     5941 tctttatcag tcatgctttt ttgagcggaa tgaacccgga atgttttaaa aaacttgaat
     6001 gtacattaag catcagcagc actatagctt tagaatattt aaaaaagtac gggcttgata
     6061 aatacaaggt taaactagct aaagttgggt atccgagttt ggattgtaaa ttatctcaga
     6121 taaaaaatat accgaaaaat cctaaaaata tatttttaag catagataac aatgcgctta
     6181 tatatgaaag catagagcct ctcataaaaa gtctattaga caacaacgaa actataatat
     6241 tccgacccaa accacaacac attagtaata atctaaatac aaattttata tcaaaattta
     6301 aaaaatatac taattttata atagaccgta aagacgttgt agatatggat gaattactaa
     6361 actgtttttt actaattagc gattatggat cgatgctatt tacattcgca tttgccacaa
     6421 atagaccagc tttaatcttt gatccaaaaa aatattactt aaaatcaagc aatccatttt
     6481 ataataaaaa tttgcattta atagcgtatg atctagatac tggattaaaa gccgttcaag
     6541 aagcaaaata tgccgatacc aaaaagataa aaaactatct aaaaacggta atttataatc
     6601 ttggaaaaag ctcagaagca atcgcaaaag agatagaagg tttaactatt gaataaaatt
     6661 tacatctatc caaacaatga agatgctttt tatgctaaat atatactcac tgagcttata
     6721 gataaatatg gtttaaaagc tgaatttata agtattttgg atgacaatat accaggtcac
     6781 gagataagta aaatctcacc taataaaaac agctttatat tgatatcttg ttttgataaa
     6841 gttcttttta aaaagctttt tgataatgca aaaggcttta aaagatatga ttttacaaca
     6901 tttataagct cattttttaa taaaatttta aatttaaatg agctaaatga tattaattat
     6961 ctgctgaaat caagcgtttt acgacttgcc ctatttttta tctcgttttt taaaaataga
     7021 tcaaatgcat ataaaatgct aaatgcaaac ttagaaaact tggtctcaaa actaagcagc
     7081 tactatataa aaatgctagg cgaaaaaccg gacgtcatat attttttaag ctcgtttgcg
     7141 aactcgaaac atcttggcaa tatagataaa tttatgaaac aaaacgggtt gaaaatagct
     7201 tattttgtag atgaaaatga cgcttcgggg gggggtatgt ttaaaaattt aaacccgatt
     7261 atagcaccgt tttactatat gttaaataca aatatctgca aaattttcat atctacccac
     7321 acggtttgta tgtcactgaa aagttcacat aaaaagctca tagttccaca tgcttttata
     7381 tacccgattg ctagtttggc gcagagaaaa cgacctcttg atgaacattt ttttaacaaa
     7441 ctagctagaa ataacaatct gattgtctgc gcaagcacaa aatctaacta taaaattcta
     7501 aaaactgctt ttaaaaatcg atgtttaaaa gccggatatc ctatgtttga tctattaccc
     7561 aacttaaatt caaaaactca agatccaaaa aataaaatac tcttggctat aaataataca
     7621 gaatttttat atatatttaa agagcaggta gaaaaattat taaataaatt tcaagttatt
     7681 ttgcgacctc atcctgctca aatttttgac aaagagtttt taaatttaaa aaaagaatta
     7741 gaaaatcatc caaacttctt ttatgacgat aacaaaaatg tcataaatcc tctcaccaat
     7801 agtacttttt gctgttttag cgatacttcg agtctatctt atacgtatgc gataacgttt
     7861 aaaaatccag ttattttatg cgtacaacag acgcaaaaat atgaagatat cagttttttt
     7921 gacaaaagac tacatatttt atataatgga gatatggtta aatccgctag aaaagctttt
     7981 gagtttgata atagtctagt agataaatat ataaaagatg aaatgtataa ttaccaaaac
     8041 tcgagcaaat ttatagctga gtttataaca cgaaaaatca aggaaaacag atgacaaaac
     8101 attatttcat atatccaaac ggcggacatt caaaaatgct cgctcacaat cttgatctgt
     8161 taggccattc atatactttt ttggatgatt ttaaagagtc tatgagttta gaatcaaatt
     8221 taaaattcat aaaagacaat ggggggggtc gatgagtaat ccgatacttc tagcttgtga
     8281 ctcactttgt caagagtcta tagagctaaa agataaacta agaacgaaag tggaaaacct
     8341 tggtttggca tgcgaagatg gttttatata tatcatggat gagctaaatt catatataaa
     8401 aagcgctaca aatcctaaaa ataaaactct tggtttgcat atgtatggaa gggtagacaa
     8461 acgatactca agcttatatc ttaacagtat atcgggcaaa ttaaatatcg tttatatttt
     8521 ttctacctat gacgaattaa ataataacaa atctttaaac aatacattcg ctatgccttt
     8581 tgaacatata aaatatctta acagcttgca gattatacta tctacaacta ataaaacttc
     8641 tgatggtaaa attttacttt ctctcaatca taagattatc gtaatggctc atgcatacac
     8701 atttccaaac ggttatttag catacgatga tataaatagc aaatataaaa aatgcgctat
     8761 taaattcaac ataaacgaga atatgccgta catactcgtc tcatcaaaaa caaattatca
     8821 aatggccatg gattatttta aagagcttta tggatacgag acaaataaat ttataaaagc
     8881 cggttatccg cctcttgatg aaaatataaa aaactatgaa gcgattaaaa aacagacgcc
     8941 agacactatt cttcttgcaa ctagaagcaa aagagttttg catctgctaa aaccagttgc
     9001 ttcaaaacta ttaaatttag gatataagct gcattttaga ccccatcctc aagactgcgg
     9061 tcataaagaa tttcaagatt ttgcttctga gtttgaaaac atagaaaatt ttacaataga
     9121 tatgaattac aaaggcataa agcagagtaa attttctatg gacacactaa gcaaaatgat
     9181 atgtatcgta actgattatt cttcttttgc ctatactttg ccgattacaa accttcgccc
     9241 agcaatacta ttttatccag ataccatttt acaaaaatgc ttagaagaaa aaataaataa
     9301 taaaatatat aaatttaacg acgatagatt gcacatagta gcaaagacgg gtaatgaagt
     9361 tttatatgcc gtgcaaaatc taaatttaga agagtgggaa aagaaaattt tagattatag
     9421 aaatgatgag atatacaata taaaaaactc gagcaaattt atagctgagt ttataacaaa
     9481 tttataaagg agataaaatg agaattttga tatacgcata tggatttata ggcaaaaata
     9541 actacgaatt tatgaaacaa ttttttgatg aagtttacgt gtatgatgat atgttaaata
     9601 tgtcaggatt gtcaaaacat tttatcaaaa atttagacag tgaaataaaa tttgatataa
     9661 ttttagtaag cgtagcagat aaaaaacttt ataaaaatat caaaaataag ttatctgcgc
     9721 attttgaatc aaatataata aagtttgcgc ccataatcct tactaaaccg agcgatctgt
     9781 ttttaaactt tatcgccgat aaatttgaca aaaaacttat tgaaaattat aatttagata
     9841 acattataaa gcacatagag caattaaaag atcaatatcg tgaatttagg ataaattttg
     9901 atcgatccgc actgcaaaaa agagaagatt ttgatttaaa atgcccgaat ttagatatat
     9961 ttcaaaaaat ttacaaaaca ggaaaaatac tcccaaaatg caaaacaatc tcatatccgg
    10021 gatttaatgt aatgttctca tctggatgcg atgagagaag cttttatttt aaggataaaa
    10081 tagactttga aaaactgcaa aatagagata aaaaattagt gatagtgttt ggcaactgcg
    10141 ggttaagagc tgattattta gatgaaatcg gaggcggaaa tattgtacaa tatttacaaa
    10201 aatacctgcc aaactatact gttttaaatc ttggaatcaa cggatctaca ttatttgaac
    10261 aaataaatat atataatgca ctattttata caattaaacc ggaatttgtt cttacggttt
    10321 ttggaggcgc agaatatata gaagcttttg ttcaagatca aatattgtta aaacgtcact
    10381 ctatcattta cgctgctatg aacaatgaga caaccgcaaa agagttgtat aaaagcgatc
    10441 ttcctataca ttctgacttt gtttatacga taaaaaaaag gtttaatcca gaaaattcgg
    10501 caatatgcaa agcattgtat gaaagactga ttcaatttta taatatagtc aatagcaata
    10561 acggtaaatt tatcgctttg ttgcaaccat ttgccattaa aaaaattaat ttagacgaag
    10621 atgaaaaaac tatactactt aaagatagct tagatgaaat aatagctaga gaagcagatg
    10681 aattcatcga tgaatttaat aaaacaacca aaaacctatc atactatttt gatctaaata
    10741 aatgcttatg tgatgaaatc aatagatgtt tttatggtac atctttgcat tatactccat
    10801 atgcaagcga aaaaatagct aaatttataa gcaaaaaaat tgaggaaata aaatgagaat
    10861 tttgatatac gcatatggat ttataggcaa aaataactac gaatttatga aacaatttgt
    10921 tgatgaagtt tatgtgtacg atgatatgtt aagtgagtta aactatcaaa aacagtttat
    10981 caaaacactc aaaaacagta aatttgattc tatattagta agcgtggcaa ataaaaatac
    11041 ttataaaaat atcaaagata atctcagcga aatatttcct gaaaatatca tacattttgc
    11101 acctattttt atggaaaaac cgagcgatct gtttttaaac tttatttcaa ataaatttga
    11161 tctgaatttg ataaaaaatt tcgacttaga aaagatacaa aatagactca aagaactaaa
    11221 aactatctat tttgaattta gagcaaa
//
LOCUS       DAPPKW010000061        11240 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.061, whole genome shotgun sequence.
ACCESSION   DAPPKW010000061 DAPPKW010000000
VERSION     DAPPKW010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11240)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11240)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11240
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.061"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            18..1010
                     /gene="nadA"
                     /locus_tag="RPW04_001398"
     CDS             18..1010
                     /gene="nadA"
                     /locus_tag="RPW04_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011139139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HDX6295488.1"
                     /translation="MKKYLKDKNALLVAHYYQKDEIVEIADITGDSLELAKKASKSDK
                     NLIIFCGVAFMGQSVKILSPHKKVIMPKLACCSLAKMIDEEYFKQSIEKITQCGIAKE
                     DIFPIVYINSSAAVKAEVGKMGGVVCTSSNADKIFDYAIQSNKKIFFLPDRCLGINLA
                     KKKGLSFCILNKADKKSILESQILCYDGFCSVHQAFTTQDIENYRKKYKDILIITHPE
                     CDPSVVEKSDFVGSTSQIIDFVKKLSPAQTIAIGTEFNLVNRLRKGSNNTFVLSSTPP
                     ICPTMNETTLHDLLRVLEAMEGRSELFTMMNEVIVPQENIHYAKLALDKMLDFA"
     gene            1209..2114
                     /locus_tag="RPW04_001399"
     CDS             1209..2114
                     /locus_tag="RPW04_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDX6295489.1"
                     /translation="MIFAPMFSIFILLASGYLAKKTKVLAQNQSIFFIDFVLCFALPA
                     LIFDKIYHVTIDTHLINIILTGLTSSIIAMFIAVGAGIVFKFKKPTIVSLALLSMFGN
                     TLFVGMPIVEGFFGDSALNEVIFYDQLATGIPISILGPLILSLGAPAKVSIIQNTMKI
                     LKFPPFVALLLGLICKNFELPDVIFAPLRMFASSVVPVALFAVGIGLGFNSIKSAWKS
                     SLVVLGAKMVLAPAIFVLITMIFDIKLNQSWMVGLLETAMPPMVLASAMILKANLDTN
                     LAISSVALGIIFTFITIPTIFIIMN"
     gene            2138..2992
                     /locus_tag="RPW04_001400"
     CDS             2138..2992
                     /locus_tag="RPW04_001400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDX6295490.1"
                     /translation="MTKYKKGLILAIIGVTLMSFESPAIKFVKASGFDYIFFFGLFLF
                     MSSIFISVIFIKPKKIKYVFLADSKGTILAALALGLSNIFFIYAVKFAGIALPVILLS
                     SAPLFCAILDKIIFKKSTPKSIFIATFFVAIGIIIVVYERLDLNSIIGVILSFLCVIS
                     FSMLFVLLSAHKNVSRTLAISGGGLVMFMISLPFFKFEASLSDIITIAIVGIFITPAS
                     RILIGRSSLYLIPAQLGLIAILEAILAPFWGFVFLGEDISSSLIIGASIIIVSIAINT
                     IIIAKKST"
     gene            complement(2985..3719)
                     /gene="fliP"
                     /locus_tag="RPW04_001401"
     CDS             complement(2985..3719)
                     /gene="fliP"
                     /locus_tag="RPW04_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344227.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HDX6295491.1"
                     /translation="MKLFFLIFFGFVTGFAAETVTIPTINLNLSAPDTPQQLVTSLNV
                     LIVLTLLALAPSLIFVMTSFLRLIIVFSFLRQAMGTQQMPPTNVLISLALILTFFIME
                     PVAKQSYNEGIKPYLEEKIGYQDAFALGAKPFKEFMVRNTREKDLALFYRIRALPNPN
                     TVDDIPFTIAAPAFIISELKTAFEIGFLLYLPFLVIDMVVSSVLMSMGMMMLPPVMIS
                     LPFKLLIFVLVDGWNLLIGNLVASFK"
     gene            3926..5236
                     /gene="glmU"
                     /locus_tag="RPW04_001402"
     CDS             3926..5236
                     /gene="glmU"
                     /locus_tag="RPW04_001402"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDX6295492.1"
                     /translation="MNEISIIILAAGNGTRMKSNKSKVLHTLCGEPMISHILKKSYEI
                     SNDVRIVLSYQFEEVKNSVLSEFKDVKIYKQDTINRPGTAGAAEAALENLNSKKTLVI
                     CGDMPLVEVNELKSLCDNTADISLSAFRAKNPFGYGRVVLNQQNVIKIVEQKDANDDE
                     KKIDLCNAGAYCFDTNLLKNIIPLIKNENASREFYLTDAIELALKQGFMVKSVLVDET
                     NFMGINDKFALSIAEEIMQNRIKENLMKNGVIMSLPDTIFIDSRAEFEGECKLEPNVV
                     ILGNSFIKNSHIKSGSVIEFSEVCDSDIGPMAHLRPNSKIYKTHIGNFVELKNASLNE
                     VKAGHLSYLGDCEINSGTNIGCGTITCNYDGKKKHKTIIGKNVFIGSDTQLVAPVNVA
                     DDTLIAAGSTVTKDTNKGDLVITRGKQINKAGYFYKFFGKNDEK"
     gene            5226..6389
                     /gene="coaBC"
                     /locus_tag="RPW04_001403"
     CDS             5226..6389
                     /gene="coaBC"
                     /locus_tag="RPW04_001403"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002948047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDX6295493.1"
                     /translation="MKNKDILLAVCGSVSFYKAYEILSLLKKEGANVRVMLSDGALKF
                     TNLISFEALCDKKVLSSVSENWQSGLDHISYSKNDLIIIAPASANTINKISCGIADNV
                     FLETILASTCPKLLAPAANHNMLENFATKKSLEILSQNGYEICEPISKTLACGDIGKG
                     ALADPKIIVEMAKRVLGKDEFYIGKKVIITSGPTTEKIDDVRGITNFSSGKMAKALAD
                     AFYYLGSEVIFISSKEFETPYKFIKFENSNELLAILNSQNTDKNDILIMCAAISDYIP
                     KTKFNGKMKKNENGINLELILNTDILKNTNLKCKKIGFKMEMDKNTAIQNAKNMLIDK
                     NLDAVCLNILDENIKFGSDETYIDFITKKSCKTTEFTDKLSAAKKIAEFIKTL"
     gene            6386..7063
                     /locus_tag="RPW04_001404"
     CDS             6386..7063
                     /locus_tag="RPW04_001404"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295494.1"
                     /translation="MINSVSKVKKLQAQSRIPNVINASLPVIIKVIEKTGYNRYNLKF
                     GSKTVSTKSEPKLEVGEEYFANIRSQSGGVININGLIKRENIGEYLENGSELLEKILS
                     NRNISWLIPYIKTKLANPKNENEFLIYSNMILALNDGVINVPFFYEKRSGLAQIKLGE
                     EILFYLLFSNFAPIIASIKNGRILTIQSAYLSFSKTLGEALGCEYKKADIRPFWVKKS
                     NFLDFKG"
     gene            7066..7743
                     /gene="uppS"
                     /locus_tag="RPW04_001405"
     CDS             7066..7743
                     /gene="uppS"
                     /locus_tag="RPW04_001405"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012001542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HDX6295495.1"
                     /translation="MNKLNHLAIIMDGNGRWAKKRGLVRTNGHQIGANVVEDIVSYCR
                     KNSIKNLTLYAFSTENWKRPKSEVDFLMNLLKKFIKLKENMLLENNIRFSTIGNLEPL
                     NEDLKFDILNLKEKTMNNSSLNLILAINYGSKDEIIRAIKKTLLYGEEINEASISKHL
                     DTNEFGDVDLLIRTGAEQRLSNFLLWQASYAELCFTPTLWPDFNSDELNNIVKNYKNK
                     HRKFGGL"
     gene            7806..8543
                     /locus_tag="RPW04_001406"
     CDS             7806..8543
                     /locus_tag="RPW04_001406"
                     /inference="COORDINATES: protein
                     motif:HMM:NF013632.1,HMM:NF018460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDX6295496.1"
                     /translation="MIYRMPLAKSIIYPASHCPKCEHKLSYIHNIPLFSWIFLRGKCA
                     FCKESISPIYPITELVCGLLGMFSLYISSNLINAILLGLCLILLFTLSVIDFKYSAVP
                     ESLLIITYFLAIFSTFDTENTIAFDESLLNSPFVISLIFAGAITIVKSVASAWINRNS
                     AEIIEPMGDADTIIIAIIGALAGIGLGIFAIVLAAILQIILHILLKKQNKEVPFIPAL
                     SLSLFIILIFKTEFLQLLEIYLKFVGI"
     gene            8543..9568
                     /locus_tag="RPW04_001407"
     CDS             8543..9568
                     /locus_tag="RPW04_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HDX6295497.1"
                     /translation="MNKVNKYLFASFLSTFASLFATLFLIMSIVFFIQIARITSYIEI
                     SFSELLKLYLFMLPQILLFTIPIGFFVSVAMSFFRLSKENESIVMFTLGQDPKNISNF
                     FIFISFIVSVVMLINSLIVMPIAQNLNDNFIEYKKTKLSLNIKPSEFGQKFGSWMVFI
                     EKQNDNNDSLKYENIVMYDVSDENERLITSQSGDIKNQNSNLELILKKGKMYDIRDNK
                     WNISSYENMVIRTLIKDNKNETYSLKEYWLKAFSDDKRAKDLSIYTLVALFPLASVMF
                     ALSFGIVTYRYEKGIIYFGIFGVLFAYFAFIMLFARQPIYAIPIIFIVSFVFSALTFG
                     KKILMKY"
     gene            9565..10342
                     /gene="truA"
                     /locus_tag="RPW04_001408"
                     /pseudo
     CDS             9565..10342
                     /gene="truA"
                     /locus_tag="RPW04_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849168.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
     gene            complement(10490..>11240)
                     /locus_tag="RPW04_001409"
     CDS             complement(10490..>11240)
                     /locus_tag="RPW04_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002781941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDX6295498.1"
                     /translation="TRKSTNLRHKATLRKILHRSSNDKFSVYVNFDIKENTNKIDDIF
                     LEISSGKHSSIASGIEYLTTAIGGFLFLNLEYQKGVPFFGGKKDVKDSLYKVEFNKIN
                     ANLTYQKNFYLNDNLVLLYKSSIGGSYSNEPLLYADKFLIGDEYTVRGFKKSSAALDY
                     GIYDNNTIFFHFLNVSKYLSALEPFIGFDIGYGRDYLLPNKDFLAGVAFGARYNLGNI
                     YLSLTTSKALHKSSNMPSETIPIYLRASLSF"
BASE COUNT         4139 a         1705 c         1847 g         3549 t
ORIGIN      
        1 agggtctaaa aacgcaaatt aaaaaatatt taaaagataa aaatgctctt ttggtagctc
       61 attattacca aaaagatgag attgtagaaa tagccgatat taccggagat agtctagaat
      121 tagccaaaaa agcatctaaa agtgataaaa atttaattat tttttgcgga gtagctttta
      181 tggggcaaag cgttaaaatt ttatctccgc acaaaaaagt cataatgcca aaactagctt
      241 gctgttcttt ggcaaaaatg attgatgagg agtattttaa gcaaagtata gaaaaaatca
      301 cacaatgcgg tatagccaaa gaagatattt tccctatagt ttatataaat tctagcgcag
      361 ccgtgaaagc agaagtagga aaaatgggcg gagtcgtttg tacttctagt aatgccgata
      421 aaatttttga ttacgctatt caaagtaata aaaaaatctt ttttttacca gatagatgct
      481 taggaataaa cctagccaaa aaaaagggtt taagtttttg catactaaat aaagcagata
      541 aaaaaagtat tttagagtcc caaattcttt gctatgatgg tttttgctcc gtacatcaag
      601 cttttaccac gcaagatatc gaaaattata gaaaaaagta taaagatata ctaattataa
      661 cccatccaga gtgtgatcca agcgtcgtag aaaagtctga ttttgtagga tctactagtc
      721 aaatcataga ttttgttaaa aagctaagcc ctgcccaaac tatcgcaatc ggaactgaat
      781 ttaatcttgt taatcgctta agaaaaggtt caaataatac ttttgtactc tcaagcactc
      841 ctccgatttg tcctactatg aacgaaacta ctttgcatga tctgctaaga gttttagagg
      901 ctatggaagg cagaagtgag ttatttacta tgatgaacga agtgattgta ccgcaagaaa
      961 atatacacta tgcaaaacta gctttggata aaatgttaga tttcgcataa caaatttaaa
     1021 tttgatataa caaaatgcaa ttagctaaaa atatataaaa taaaatagtt aaaataaata
     1081 atgcttataa caataatttt actttaaaaa ctatcggtaa aaacggtgtt aggcgagcta
     1141 ttttatttta tattggatta acaaaaataa ttctataatt atagaaaatt ttaaggataa
     1201 attttataat gatcttcgca cctatgtttt ctatatttat attattggcc tccggatatt
     1261 tagctaaaaa aacaaaagtt ttagcccaaa atcaatctat attttttatt gatttcgtac
     1321 tttgctttgc tttacctgct ttgatatttg ataaaattta tcacgttact atagacactc
     1381 atcttataaa tatcatttta acaggtctta cttcatcgat aattgctatg tttatagcag
     1441 tcggcgccgg tatcgttttt aaatttaaaa aaccaacgat agtaagttta gcgcttctta
     1501 gtatgtttgg taatacgtta tttgtcggta tgccgatagt agaagggttt tttggcgata
     1561 gcgcgttaaa tgaggttata ttttacgatc aacttgccac cggaatacct atttctatac
     1621 taggtccgct tatactatct ttaggagctc cggctaaagt ttccatcatt caaaatacaa
     1681 tgaaaatcct caaattcccg ccgtttgtag cacttctttt aggattaata tgtaaaaact
     1741 tcgagcttcc agatgttata tttgcgccgc ttcgtatgtt tgctagcagc gttgtgcctg
     1801 tagctctatt tgcagttggt atagggttag gatttaacag cataaaaagc gcttggaaaa
     1861 gctcattagt cgtattaggt gctaaaatgg tgttagctcc agcgattttt gttcttatta
     1921 ctatgatatt tgatataaaa ctaaatcaaa gctggatggt cggtctttta gaaacggcaa
     1981 tgcctcctat ggtattagca agcgctatga tattaaaagc aaaccttgat acgaatttag
     2041 ctatatcaag cgttgccctt ggtataatat ttacttttat tacaattcct actatattta
     2101 ttataatgaa ttaaattttg aatttaaaaa aataaaaatg acaaaataca aaaaagggct
     2161 tatactagca attatcggcg ttactttgat gagctttgaa tctccggcta taaaatttgt
     2221 taaagctagc ggatttgatt atatattttt ctttgggcta tttttattta tgagttcgat
     2281 ttttatctct gttatattta ttaaaccaaa aaaaattaaa tacgtatttt tagcagattc
     2341 aaaaggtact attttagcag ctcttgctct tggacttagt aatatatttt ttatatatgc
     2401 cgttaaattt gcaggtatag cgctgcctgt tatattgcta tcttcagcgc ctctattttg
     2461 tgctatactc gataaaatca tatttaaaaa atcaactccc aaaagcatat ttatagcaac
     2521 gtttttcgtt gcaataggaa tcataatagt agtctatgaa agacttgatc ttaactctat
     2581 tataggagtt atactatcgt ttttatgcgt aatcagcttt tctatgctgt ttgtgttatt
     2641 aagcgctcat aaaaatgtta gtagaacatt ggctataagc ggaggcggac ttgtaatgtt
     2701 tatgatctct ttaccgtttt ttaaatttga agctagttta agcgatatca tcacaatagc
     2761 catcgtaggt atatttataa ctcctgcttc aagaatactt ataggacgtt cgtctcttta
     2821 ccttatacct gctcagcttg gacttatagc aatacttgaa gctattttag ctcctttttg
     2881 gggatttgta tttcttggag aagatatcag ctctagtctt attataggcg caagtattat
     2941 catagtaagt atagctataa atacaattat tatagctaaa aaatctactt gaaactagcc
     3001 actaagtttc ctataagcaa attccatcca tcaactagca caaagataag caacttaaat
     3061 ggaagagata tcatcacggg cggcaacatc atcataccca tagacataag cacagaacta
     3121 acgaccatat ctataaccaa aaacggcaaa tacagcaaaa atcctatctc aaaagctgtc
     3181 tttaattcgc tgatgataaa agctggagca gctatagtaa aaggtatatc atctaccgta
     3241 tttggatttg gtagtgccct tatacgataa aaaagagcta gatctttttc tctggtattt
     3301 cttaccataa actctttaaa tggctttgct ccaagagcaa aagcatcttg atagccgatt
     3361 ttctcttcta aatacggctt tatgccttca ttataagatt gtttagcaac tggctccata
     3421 ataaaaaacg taagaatcaa agctaaagaa ataagtacgt ttgtaggcgg catttgttgt
     3481 gttcccatag cttgtctaag aaatgaaaat acaataataa gccttaaaaa gctagtcatc
     3541 acaaaaataa gcgacggtgc aagagcaagc agagtaagca caatcaaaac attcaggcta
     3601 gtaactagct gctggggcgt atctggagcg ctaagattta aatttatagt aggtatggtt
     3661 acagtctcgg ctgcaaaacc ggttacaaat ccaaaaaata ttaaaaaaaa tagtttcaaa
     3721 tttagcctta cgttaaaata ttaaattcta gctaaatttt tgtaaaaatc aatttaaatt
     3781 taaagatcaa atactaaaat ctccaactat aataaatata taaacgcatc aacgcctata
     3841 aagcgcattt aaagcaacat aggttttaat atttttttat gcttatctta gttacaatat
     3901 ctctactaaa tttagagaga aaatgatgaa tgaaatatct ataataatcc tagccgcagg
     3961 caacggcaca cgtatgaaat caaataaatc aaaagtcctg catacgcttt gcggggaacc
     4021 aatgatatcg catatattaa aaaagtctta cgaaatttcc aacgacgtaa gaatcgtctt
     4081 atcgtatcaa tttgaagagg ttaaaaatag cgttttaagc gaatttaaag atgttaaaat
     4141 ttataagcaa gacactataa atagaccggg aacagccgga gctgcagaag ctgcactaga
     4201 aaatttaaat tctaaaaaaa cacttgttat ttgcggagat atgcctttag tagaggtaaa
     4261 tgagctcaaa tctctatgcg acaatacggc agatatatcg ctttctgctt ttagagcaaa
     4321 aaatcctttt ggatatggaa gagttgtgtt aaaccagcaa aacgtaataa aaatagtcga
     4381 acaaaaagat gcaaacgatg atgaaaaaaa gatagatctt tgcaacgccg gagcttactg
     4441 ctttgataca aatttactaa aaaatataat acctcttatc aaaaacgaaa acgctagccg
     4501 cgagttttat ctaactgatg ctatagaatt ggctttgaag caaggattta tggtaaaaag
     4561 cgtacttgta gatgagacaa atttcatggg tataaatgat aaatttgcac ttagtatagc
     4621 cgaagagata atgcaaaaca gaataaaaga aaatcttatg aaaaacggtg taataatgag
     4681 ccttccagat actattttta tagatagcag agccgaattt gaaggcgaat gtaagcttga
     4741 accaaatgtt gtgattttag gcaatagctt tataaaaaat tctcatataa aaagcggatc
     4801 cgttattgaa tttagcgaag tttgcgatag cgatataggg cctatggcgc atttaagacc
     4861 taattccaaa atatacaaaa cacacatagg aaattttgtc gaactaaaaa acgcaagttt
     4921 aaatgaggta aaagcaggac atctaagcta ccttggagac tgcgagatta acagcggtac
     4981 gaatatcggc tgcggcacca taacttgcaa ctacgacggt aaaaaaaagc ataaaacaat
     5041 tataggaaaa aacgtattta taggaagcga tactcaactt gtagctcccg ttaatgtagc
     5101 agacgatact ttaatagcag ccggaagtac ggttacaaaa gatacaaaca aaggcgattt
     5161 agttatcaca agaggcaaac agataaataa ggctggatat ttttataaat tttttggcaa
     5221 aaacgatgaa aaataaagat attttactag cggtatgcgg aagtgttagc ttttataaag
     5281 cttatgaaat tttaagttta ttaaaaaaag aaggtgcaaa cgtccgcgtt atgttaagcg
     5341 atggtgcttt aaaatttaca aatttaataa gctttgaagc gctttgcgat aaaaaagtat
     5401 tatcaagcgt gagtgagaac tggcaaagcg ggctagacca tatctcatat agcaaaaacg
     5461 atcttataat catagctcca gcctctgcaa atactataaa caagatatct tgcggtatcg
     5521 cagataatgt gtttttagag actattttag catcaacttg tcctaaactt ctagctccag
     5581 cagcaaatca taatatgctt gaaaacttcg caaccaaaaa aagtttggaa atactctcgc
     5641 aaaacggtta tgaaatttgc gagccaattt caaaaactct agcatgcgga gatatcggaa
     5701 aaggtgcttt agcagatccc aaaattatag tagaaatggc aaaaagagtg cttggaaaag
     5761 atgagtttta tatcggtaaa aaagttataa taacaagcgg acctactact gaaaaaatcg
     5821 atgacgtacg gggtataaca aacttttcaa gcggaaaaat ggcaaaagct ctagcagatg
     5881 cgttttacta tttaggctca gaagttatat ttataagctc aaaagagttt gaaactccat
     5941 acaaatttat taaatttgaa aactcaaacg agcttttagc aatattaaat tcccaaaata
     6001 cagataaaaa cgatattttg ataatgtgcg ccgcaattag tgattatata ccaaaaacta
     6061 aatttaatgg caaaatgaaa aaaaatgaaa acggaataaa tttggagctg attttaaata
     6121 cggacatatt aaaaaatact aatctaaaat gcaaaaaaat aggctttaaa atggaaatgg
     6181 ataaaaatac cgctatacaa aatgcaaaaa atatgctaat agataaaaat ttggacgcgg
     6241 tttgtttaaa tattttagat gaaaatataa aattcggaag cgacgaaacg tatattgatt
     6301 ttatcactaa aaaaagctgt aaaacaactg aatttacgga taaattaagt gcggcaaaaa
     6361 agatagcgga gttcataaaa acactatgat aaactcagtt tcaaaagtaa aaaaactaca
     6421 agcacaaagc agaattccta atgtcataaa tgcaagcctt ccagtaatca taaaagtcat
     6481 agaaaaaaca ggatataacc gttataatct caaatttgga agtaaaacag tatctacaaa
     6541 atcagagcca aaactagaag taggcgaaga atactttgca aatataagat ctcaaagcgg
     6601 cggtgttata aatataaatg ggctaataaa aagagaaaat attggcgaat atttagaaaa
     6661 cggatccgaa ctcttagaaa aaattctaag caaccgaaat atatcttggt tgatacctta
     6721 tatcaaaaca aaacttgcaa atccgaaaaa tgaaaatgag tttttgatat attcaaatat
     6781 gattttagca ttaaatgacg gagtcatcaa cgtaccattt ttttatgaaa aaagaagcgg
     6841 cttagcacag ataaaacttg gggaagaaat cctattttat ctattattta gcaattttgc
     6901 accgattata gctagtataa aaaacggtag gattttaacc atacagtctg cgtatttaag
     6961 tttttctaaa actctcggag aggctcttgg ttgcgaatat aaaaaagcag atattagacc
     7021 tttttgggtt aaaaaaagta attttttaga ttttaaaggc tgatcttgaa caaactaaat
     7081 catctagcta ttattatgga cggcaacggt agatgggcga aaaaaagagg tctagtgcgt
     7141 acaaatggac accaaatagg agccaacgta gtagaagata tagttagtta ctgccgcaaa
     7201 aacagcataa aaaatttaac actttatgca tttagtacag aaaattggaa acgacctaaa
     7261 tccgaagttg attttttgat gaatttatta aaaaaattta ttaaattaaa agaaaatatg
     7321 cttttagaaa acaatattcg ctttagcacg ataggaaatt tagagccgct taatgaggat
     7381 ttaaaatttg atatattaaa tttaaaagaa aaaactatga ataactctag tttaaattta
     7441 attttagcta tcaactatgg aagcaaagac gagataataa gagcgattaa aaaaaccctc
     7501 ttatacggtg aagaaatcaa tgaagcatcc atatcaaaac atcttgacac gaacgaattt
     7561 ggagatgtag atctgctcat aagaaccggc gcagagcaaa ggcttagcaa ctttttatta
     7621 tggcaagcaa gctacgcaga actctgtttt acaccgactt tgtggcctga ttttaatagc
     7681 gacgaactaa acaacattgt aaaaaactat aaaaataaac atagaaaatt cgggggatta
     7741 tagtggaaat ttattatatt ttatttttca tatttagtat ttgtatagga tcgttttgca
     7801 atgttttgat ataccgaatg cctcttgcaa agagtataat ctacccagct agccactgtc
     7861 caaaatgcga gcataaatta agctatatac ataatattcc gctattttct tggatatttt
     7921 tacgaggtaa atgcgcattt tgtaaagaaa gtatttcgcc tatttatcct atcacggaac
     7981 ttgtctgcgg acttcttggt atgtttagcc tatatatcag ctcgaattta ataaacgcga
     8041 tacttcttgg gctctgttta attctgcttt ttactcttag cgttattgat tttaaatata
     8101 gcgccgtacc tgagagtctg cttattataa cttatttttt agctattttc agcacattcg
     8161 ataccgaaaa tactattgca tttgacgaaa gtttgttaaa ttctccattt gtgatatcgt
     8221 tgatatttgc cggagcgatt actatcgtaa aaagcgtagc aagtgcttgg ataaatcgaa
     8281 atagcgccga aataatagaa cctatgggtg atgccgatac tataataata gccataatag
     8341 gtgctttggc aggaatcggt cttggaattt ttgctattgt tctagctgca attttacaga
     8401 taattttaca tattttacta aaaaaacaga acaaagaagt gccgtttatc cctgctctta
     8461 gcttatctct tttcataatt ttgattttta aaacagaatt tttgcaactc cttgagatat
     8521 atcttaaatt tgtggggata taatgaataa agtaaataaa tacctttttg ctagtttttt
     8581 gtcgactttt gcatctttgt tcgcaacttt atttcttatt atgtctattg tattttttat
     8641 acaaatagca agaataacaa gctatataga gataagcttt tcagaacttt taaaacttta
     8701 tctatttatg ttgcctcaaa tacttctatt tactattcct ataggatttt ttgtatctgt
     8761 tgcaatgagt ttttttcgac tttcaaaaga aaatgaaagc atagtaatgt ttactttagg
     8821 gcaagatcca aaaaatatat ctaatttctt tatatttata tcttttattg tatcggtagt
     8881 gatgctgata aactcattga tagttatgcc tatagctcaa aatctaaacg ataatttcat
     8941 agaatacaaa aaaacaaagc taagtttaaa tataaaacca agcgaatttg gacaaaaatt
     9001 tggaagctgg atggtattta tagaaaaaca aaatgacaat aatgatagtt taaaatatga
     9061 aaatatagta atgtatgacg tttcagacga aaatgaaagg ctcatcacat cacaaagtgg
     9121 agatataaaa aatcaaaact caaatttaga acttatcctt aaaaaaggga aaatgtatga
     9181 tataagagat aacaaatgga atatcagtag ctatgaaaac atggtaatta gaactctaat
     9241 aaaagataat aaaaacgaaa catactcttt aaaagagtac tggctaaaag cattcagcga
     9301 tgataaaaga gcaaaggacc ttagtatata tacacttgtt gcgctgtttc cattggcttc
     9361 agtgatgttt gctcttagtt tcgggatcgt tacttataga tacgaaaaag gaataatata
     9421 ttttggaata tttggtgttt tatttgcgta ttttgctttt ataatgctat ttgcaaggca
     9481 acctatttat gctattccga ttatttttat agttagtttt gtattttcgg ctttgacctt
     9541 tggtaaaaaa atattgatga aatattgatg aaaatcgccc tcacctactc atacaacggt
     9601 tctaaattca aaggctcgca aacacaacca gataaaaatg cagttgaaga ctgtcttaat
     9661 tttgctttaa atagagttgg aatttttaaa ccggtcgtat ctagttctcg cacggataaa
     9721 ggagttcacg ccatatctca agtctcatgt gtagagtgcg gagagttttg gaacgaaaga
     9781 tttgagcggt taaaaaatca gataaataag catacgaaac catatattta tataaaaaac
     9841 atacaaaaag taagcgatga atttcatccg cgttatgacg ccgttgctag aagttatcgc
     9901 tatatcatat atcacgatga gcaaaatgta tttttagcag actatgtgca tttctataaa
     9961 actttaaaca tacaaagact aaacatagct ttaaaactat ttataggaaa acatgatttt
    10021 acaccgtttt ataaagtagg aagtggcgaa aaatcaacag tgagagagat attttacgca
    10081 aaagcttatc aaatttacaa aacaaaagac gccaaattca gcgctaaatt taaaacacaa
    10141 aaaccgactc ttactattat aaatttcaaa gcaaatggct tttttaagag cgcaagtaag
    10201 actaatggta gcaaatgctc tgcaagcatg taaaagtgat gaaaatttat ataagtttat
    10261 ctcaaatttc aaagagcaaa agccgctcac tagaatgccc tctccgccaa atggattgta
    10321 tctaaaacgg gtattttatt gaatttacca aatttaaata acatagatac tataactaac
    10381 gcttataaaa tgttagcggg aataaattta ttcgtttttg ctaacctaca aaaaaactat
    10441 agatataaca actttagcaa ataaaatatt gctgcattac tttaatcagc taaaaagata
    10501 aagaagctct aagataaata ggaatagtct cgctcggcat attagatgat ttatgtaaag
    10561 cttttgatgt agttaagctt aaatatatat taccaagatt ataccttgct ccaaaggcta
    10621 cgccggctaa aaaatcttta ttcggtaaaa gataatccct gccataacca atatcaaacc
    10681 cgataaaagg ttctaatgcg cttagatatt ttgacacgtt taaaaaatga aaaaaaatag
    10741 tattattgtc atatattcca taatcaagcg ctgctgaact ttttttaaag cctctaacgg
    10801 tatattcatc gccgattaaa aatttatctg catacaaaag cggttcatta gagtagctac
    10861 ctcctatact gcttttatat aaaagaacta aattatcatt gagatagaaa ttcttttggt
    10921 aagtcaagtt agcattgatc ttgttaaatt ctactttata taaagaatct ttaacatctt
    10981 tttttccgcc aaaaaacggt actccttttt ggtattctaa atttaaaaac aaaaatccac
    11041 cgatagcagt agttaggtat tctattccgc ttgctatgct tgagtgtttt ccgcttgaaa
    11101 tttctaaaaa tatatcatca atcttattcg tattttcctt gatatcaaaa ttaacatata
    11161 ctgaaaattt atcattactg ctacgatgaa gaatttttct gagtgtagct ttatgtctta
    11221 aattcgtact ttttctagta
//
LOCUS       DAPPKW010000062        11112 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.062, whole genome shotgun sequence.
ACCESSION   DAPPKW010000062 DAPPKW010000000
VERSION     DAPPKW010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 11112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11112
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.062"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            50..490
                     /locus_tag="RPW04_001410"
     CDS             50..490
                     /locus_tag="RPW04_001410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295499.1"
                     /translation="MKSSEIINHILQNPLYGNLKAARECKEALLMLGKSRSLLIKFAY
                     QRQNTLFIAVAHPLALQELKNDNIINQIKTLLNKYIIFKEDTSLKRVDEVKIFITKLS
                     KFKKASEIKSRILERSDGEFLNLAKDRVIYELFEKLRVSINANR"
     gene            477..2285
                     /gene="uvrC"
                     /locus_tag="RPW04_001411"
     CDS             477..2285
                     /gene="uvrC"
                     /locus_tag="RPW04_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDX6295500.1"
                     /translation="MLIDELKTLPNEPGVYQYFDKNSKLLYVGKAKVLKNRVKSYFSF
                     TGTLSPSSRLSPRIAKMINEAVHIEWITTSSESDALILENSFIKQLKPKYNILLRDDK
                     TYPYIYVDLSSNFPRFEITRKVIKGKNIKYFGPFFKGAKEILEALYLEFKLVQKKSCL
                     KDKKACLFHQINRCHAPCIGAIKKEEYAKIVSSAIKKLKNPELLVENLSNLMQNFAER
                     ENYEEAAKLRDQINTIKDISIKVQIDIAKLEDFEAIAISCAKGFVCSVRFSIRDGKVS
                     FANHSLTPAKDTINLDLSGIYKQVILEAFPDDLPINTTKIYTYSEFEDMELVSQILSK
                     RHSKKFHIISPKAGDKKSLLEVALKNCDIFIEKHLKAHSYEFLNEIKEYFKLTNLPIK
                     IECFDNSHLFGTAPVGGMISWELDKFKKEHYRHIHLNSTNDYDQMNEMLTNRALRFDK
                     LNPPDLWVLDGGDALLKLAKNIVQSSGANVDIIAISKEKIDAKAHRAKGNANDKIYTE
                     FGKLSLSSNDKKLQFFQRLRDEAHRFAISFHQNSRKKQDLQSSELMNLGVSDGSIKKL
                     LSYFGSFENIHKASWDDIKKVTNKTVANKILAIKKP"
     gene            2348..3100
                     /locus_tag="RPW04_001412"
     CDS             2348..3100
                     /locus_tag="RPW04_001412"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295501.1"
                     /translation="MILYNQHYEMIAISRETLNMFGFSDPTLFFKTHSDISEFFVKHI
                     SIYDKNRHFIDLICNNPEYNIQNMVFKLYNGDILNAYMDVEIVYQKYKTEYFYRVSIT
                     KTMLYEKNPTNSQELNSDSIFNFSNSNAQSIDEELTKEYKVDRIWFWDTFSFSNISKD
                     KFIKLMHEFIKKAEHSYEKLYEAKLFNQMDIINKTVKDLANYAYELKFSDFLNILINI
                     QISCNDEEINEYFNKYKDFIKKLNEITKKEML"
     gene            3097..6147
                     /locus_tag="RPW04_001413"
     CDS             3097..6147
                     /locus_tag="RPW04_001413"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012301.1,HMM:NF012722.1,HMM:NF014567.1,
                     HMM:NF019974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDX6295502.1"
                     /translation="MKTFFSTINILRLISTIPLLIIFFLSSFYLYNSYKTYLNLNQLN
                     YEFGISQTLTKLSKELNQEKSMSVLYMATGGIFDSENIEQQRKNSDELIKQTLKIYEN
                     IPNDKNANIIKNRLLDINRIRDKIDSLSISFDEIFFEYFEIINKAIEEELMMLKDHTL
                     SPHLTTFLTSFTLAYANSNLISTKRDFVSQILIQNRDFKSNEVKVWLSLIRGDKFHYQ
                     YIPESQAKNIIDDIYNSIEYANLISRLENYATQIIRNSSNTAEANFASYFDTVSDELA
                     ISYEIQDILKNQIDYEIIEFKSSFFNHVIIGAFIWIVNIILFIIGCLTKTSIKKNISE
                     LKNILKQIANLTDNKNIDLSTNSGISKAYDMIAKALELITTQKQAAIDANRSKSAFLA
                     NISHEIRTPLNGIIGFTDLLKNSNLKKQEKELVGVIEQSSENLLRIINNILDISKIES
                     RKVELDNEVFSPIKEFSSAVELYSQKAYEKDIEFICYIDPSLNKHLEGDYFKVKQVLI
                     NLIGNAIKFTPQNGQIIVDITKLDENEDGKTTIKFSVKDNGIGIDKNMLEKIFDSFIQ
                     ANKDITKIYGGTGLGLSISNEYIKMMDSIIKVKSELGEGSEFSFVIKFKGADSKDQNY
                     FMDFAGKTVTVFTTRKDSLYDEYLEKYFDFLGIETNIVYDSNELLKLNKEDIVVTKFK
                     NYARLKTDAFVLVLANTKEMQTSLVEDRNISFINEPLSITKLKKALEKADYKKRQKSN
                     DAYSHKYNISVLLATNNENKTKDIEHILKELCERVEVVNDAKSVIEYTQISHYDIIFL
                     DMVLDEMNAILCAKNMIHHEKQNNLPHTHIIGIVNTMSNLNQINVEKNYLDDYIQKRS
                     SKNEILQILNNFTPQNAINLRAKIIAPINKKVEAKEEIANLKDVLLFKKSNIENKIFS
                     TVLNGFCSSVDVVCSFEELKEYLQNSAYRLVLLDYKIPNFESNLIYSWINSSRQKYKI
                     DTKTIIFIDPNVEIDESLDDKFDEILTSLINKTQLEARIKPYIK"
     gene            6154..6534
                     /locus_tag="RPW04_001414"
     CDS             6154..6534
                     /locus_tag="RPW04_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012108514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDX6295503.1"
                     /translation="MKKINVLVVDDDEISLKLLELMLKNNPLVAQIIKAKNGLEGINI
                     LESKFDTGLILLDLSMPVMNGIEFLINLESREYLSMIPVVVISTDETKKQEVFKLGAY
                     DFILKPIRQKELNMVVENAMNILL"
     gene            complement(6541..6951)
                     /locus_tag="RPW04_001415"
     CDS             complement(6541..6951)
                     /locus_tag="RPW04_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDX6295504.1"
                     /translation="MDENISKFLDKIHILTLGVISDGLPYLCSCFYAYDPDLNSFIVA
                     SKSSSKHIQSIKNQPNIAINIALDTKIVGKIEGVQANGVMKLLDDERLEKLYFKRFPY
                     AKLLNPELYVIRIDYIKYTNNRLGFGKKIVWQRD"
     gene            7042..7569
                     /locus_tag="RPW04_001416"
     CDS             7042..7569
                     /locus_tag="RPW04_001416"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HDX6295505.1"
                     /translation="MTTQNYANASYNNFAFNFKTSSGDSINLSLYDNKKLNYSSQKDG
                     SSSSKELTLSHQYGYKFEFNSNGLSEQDRAEIAQAMEDLKPKLEDFMKKIKENEPFSD
                     DTITNLANSLKKDLPNVKSENQKNAVSSSLLDLFDNIITKNTDNNVLDKNILYPANKL
                     FEEMLKQMERFSIYA"
     gene            7625..8320
                     /locus_tag="RPW04_001417"
     CDS             7625..8320
                     /locus_tag="RPW04_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HDX6295506.1"
                     /translation="MTYIKPIEEMLLLQQKLNDETNGTNWETGITKDGKLISWKRCIY
                     MECAELVDSFAWKHWKAINKDPNLENVTIEIVDIWHFIMSLGLENYHTNKLGDIHTLA
                     IDISSCSGFSEFCKEAYNIKEYNIYEIINDIEVIINRCSGFDINFFDLLKDYFRLSLK
                     CGVNLSRLFEVYMGKNVLNKFRQDHGYKAGTYNKNWNGKEDNEVMSQILESGINSMDE
                     IYAKLKIEYSKVK"
     gene            8317..9033
                     /locus_tag="RPW04_001418"
     CDS             8317..9033
                     /locus_tag="RPW04_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EI24 domain-containing protein"
                     /protein_id="HDX6295507.1"
                     /translation="MINIINLCIGDFFKKKFILLSLLPTVFSVIVFSSLMIFGGSELL
                     IALKNLASNGEFLDKDGIVATILSFSIVKALILSSFYIFSGFFVIILSSALAGIIAGF
                     LTPIVTKYVNKKYYNINIDSEVTTSRVIKISIITFLKFIAILLICIPFLFVPFLNLFI
                     INLPFFYLFYKFMLIDVASNCMDKTMFEITMIKGAGLGFALSAILFYLLCLIPFIGLF
                     FQLFFVMFFTHLLFKKNQNQ"
     gene            9091..10809
                     /locus_tag="RPW04_001419"
     CDS             9091..10809
                     /locus_tag="RPW04_001419"
                     /inference="COORDINATES: protein motif:HMM:NF037997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi symporter"
                     /protein_id="HDX6295508.1"
                     /translation="MYISKSFLVIICGVCIFLYAMVVLESSFSMFTAIENFLKKATSS
                     RISGFGFGFITVVIMQSSGLISVLTISFLSAGLISLASGLSIIYGANLGTVVGAWLVA
                     GLGLKVDIALYAMPLIIIGVLFIFNKSEKLKGCGYFLLSIGLLFLGIAYMKSGFDNIK
                     ETIDLSKYAMTGISGLLVYTLIGLGVTVILQSSTATITIAITALGVNQISYENAVAIA
                     IGSNVGSTIMAIIGSINANQEGKKLMVAHVIFNVTSAIITLIFINFFIFITDETAKVI
                     GIRNDDYTMKLAIFHTYFNLTGVFIFYPLTGLMEKFLNKYIKFEYKRSKVDRAYYLNT
                     DSMQFSDSALEVLTKEMKHLYANASSIIAKSISISKSDIASNLSAEEVISMRQNPIQI
                     NFDELYNNRFKEIYSQIIDFAITASSKAKKEDVSKFMDIRRVTLMLAEALKDMKNSQP
                     NIYKFMTSNNIDAKNEYDKLRIKMLKSLRIMDKIANINDGSSLKTELKELKQIYYDYE
                     KDEINLDTLLGGKKITNKMATSLMNDTALIQNITKNMLRIIEVIFIHNNSKEDFEFIK
                     QSIGES"
     gene            10871..11062
                     /locus_tag="RPW04_001420"
     CDS             10871..11062
                     /locus_tag="RPW04_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295509.1"
                     /translation="MKYKSKVYCNICLANDSEEPNKVFIQATHKGEIVDICTSCMPTI
                     IHGSGIAIKSNDEILEEIK"
BASE COUNT         4446 a         1572 c         1729 g         3365 t
ORIGIN      
        1 atccgcaacc aacaagaaaa attaataaaa aagatgttaa aatcgccaaa tgaaaagttc
       61 tgaaattatt aatcatattt tgcaaaatcc tttatacgga aatttaaaag ccgctcgcga
      121 atgcaaagag gctcttttga tgcttggaaa aagcagaagc ttacttataa aattcgcata
      181 tcaaagacaa aatacgctat ttatagcagt tgctcatcca ctcgctttac aagaattaaa
      241 aaatgataat atcataaatc agataaaaac tctgttaaat aaatatataa tttttaaaga
      301 ggatactagt ttaaaacgcg tagatgaagt aaaaatattt ataacaaaat tatctaaatt
      361 taaaaaggct tccgaaatca aaagtagaat tttagagaga tcagacggag agtttttaaa
      421 tttagcaaaa gatagagtta tatacgaact ttttgaaaaa ttaagagtga gcataaatgc
      481 taatagatga gctaaaaact cttccaaatg aaccaggagt ctatcaatac tttgataaaa
      541 actcaaaact gttatacgta ggaaaagcaa aagtattaaa aaacagagta aaaagttatt
      601 ttagttttac tggaactttg agtccaagtt ctcgcctaag tccgcgtata gcaaagatga
      661 taaatgaagc cgttcatata gaatggataa ctacttcaag cgaatcagac gctttaatac
      721 tcgaaaactc atttataaaa caactaaaac caaaatataa tattttacta agagacgata
      781 aaacctatcc gtatatatac gtagatttga gcagcaattt tcctcgtttt gagataacca
      841 gaaaggttat aaaaggcaaa aatataaagt atttcggacc attttttaaa ggagcaaaag
      901 agatactaga agctttatat cttgagttta agttagtaca gaaaaaatca tgcttaaagg
      961 ataaaaaagc atgtcttttt catcagataa atagatgtca cgcgccttgc ataggggcta
     1021 taaaaaaaga agaatatgca aaaatcgtct ctagtgccat aaaaaaacta aaaaatcctg
     1081 aacttttggt agaaaatctt tcaaatttaa tgcaaaactt tgccgaacgg gagaattatg
     1141 aagaagcagc aaaactaaga gatcagataa ataccataaa agatataagc ataaaagtgc
     1201 agatagatat cgcaaaactt gaagattttg aagctatagc cataagctgt gcaaaaggtt
     1261 tcgtatgctc tgtgagattt tctataagag atggaaaagt atcatttgca aatcatagtt
     1321 taactccggc taaagatact ataaacttag atctatcagg aatttataaa caagttatat
     1381 tagaagcatt tccagatgat ctacctataa atactacaaa aatttataca tacagtgagt
     1441 ttgaagatat ggagttagta tcgcaaatac tatctaaaag acattctaaa aaatttcata
     1501 tcatctctcc aaaagcagga gataaaaaat cactcttaga agtcgcgtta aaaaactgcg
     1561 atatttttat agaaaaacat ttaaaagcac atagttacga gttcttaaat gagataaaag
     1621 agtattttaa actaacgaat ttaccgatta aaatcgaatg ttttgataac tcacatctat
     1681 ttggaacagc tcctgttggt ggcatgatct catgggaact ggataaattt aaaaaagagc
     1741 attaccgtca tattcatcta aatagtacaa acgattacga tcagatgaat gagatgctta
     1801 caaatcgagc tttacgtttt gataaactaa atcctcctga tctttgggtt ttagatggcg
     1861 gagacgcgct tttaaaactt gctaaaaata tagtacaaag cagtggcgca aatgttgaca
     1921 taattgctat ttcaaaagaa aaaatagatg caaaagctca ccgagccaaa ggtaacgcga
     1981 atgataaaat ttatacagaa tttggaaaac ttagcttaag ctcaaacgat aaaaaactac
     2041 aatttttcca acgtttgcgc gatgaagctc acagatttgc catatcgttt caccaaaata
     2101 gcagaaaaaa gcaggattta caaagcagcg aacttatgaa tttaggcgta tctgacggaa
     2161 gcataaaaaa acttttaagc tattttggta gttttgaaaa tattcataaa gcaagctggg
     2221 acgatataaa aaaagtaacg aataaaaccg ttgcgaataa aatactagcc attaaaaagc
     2281 cttaaataag atatttttaa attatacttt gctaaaatat aaaagcaaat tataaactgg
     2341 attttaaatg atactttaca atcagcacta cgagatgatc gctataagca gagagacgct
     2401 taacatgttt ggatttagcg atccaaccct atttttcaaa acacatagcg atatatcgga
     2461 gttttttgta aaacatatct ctatttatga taaaaataga cattttatag accttatatg
     2521 caataaccca gaatacaata tacaaaacat ggttttcaaa ctttataacg gagatatact
     2581 aaatgcttat atggatgtcg aaatagtata tcagaaatac aaaacggaat atttctatag
     2641 agtaagcata actaaaacta tgctttatga gaaaaatccg actaactctc aagaattaaa
     2701 ctccgattct atttttaact tttcaaattc caatgcccaa agtatagatg aagagctaac
     2761 aaaagagtat aaagtcgata ggatatggtt ttgggatact ttttcttttt caaatatatc
     2821 aaaagataaa tttataaaac ttatgcatga atttataaaa aaagccgaac attcttatga
     2881 aaaattatac gaagcaaagt tatttaacca gatggatatt atcaataaaa cggtaaaaga
     2941 tttagcaaat tacgcttatg aactaaaatt tagtgatttt ctgaacattt taatcaatat
     3001 tcaaatatct tgcaacgacg aagagataaa cgagtatttt aacaaataca aagactttat
     3061 taaaaaatta aatgaaatca caaaaaaaga gatgttatga agaccttttt tagcaccata
     3121 aatatactaa ggcttataag caccattccg cttcttatca tatttttctt atctagtttt
     3181 tatctatata attcatataa aacctattta aatttgaatc aactaaacta tgaatttggt
     3241 atatctcaaa cattaacaaa gctatcaaaa gagctaaatc aagaaaaaag tatgagcgta
     3301 ctatatatgg ctactggagg aatttttgat agtgaaaata tagaacaaca gaggaaaaat
     3361 tcagatgagc ttataaaaca aactcttaaa atatatgaaa atataccaaa cgataaaaac
     3421 gcaaatatca taaaaaatag acttcttgat ataaatcgga taagagataa aatagactct
     3481 ttatctatca gctttgatga gatatttttt gaatattttg aaataataaa taaagcgata
     3541 gaagaagaac ttatgatgct taaagatcat actttatctc ctcatctaac aacgttttta
     3601 acatcattta ctttagctta cgcaaatagc aatttaataa gcacaaaaag agattttgta
     3661 tctcaaattc taatccaaaa tagagatttt aaatcaaacg aagtaaaagt ttggctaagt
     3721 ctcataagag gagataaatt tcattatcaa tatattcccg aatctcaagc aaaaaatata
     3781 attgatgata tatataacag tattgaatat gcaaatttaa tatcaagact tgaaaattac
     3841 gcaacgcaga tcataagaaa ctcatcaaac acggcagagg cgaattttgc ttcttatttt
     3901 gatacagtta gtgatgagtt agcgatatca tacgagatac aagatatatt aaaaaatcag
     3961 atcgattatg agataataga gtttaaatca tcttttttca atcatgttat cataggagct
     4021 ttcatctgga ttgtaaatat aatactattt ataataggat gtctcacaaa aacaagcata
     4081 aagaaaaata tatctgaact caaaaatata ctaaaacaaa tagcaaatct aaccgataat
     4141 aaaaatatag acctaagcac aaacagcggt ataagcaaag cgtacgatat gatagcaaaa
     4201 gcgcttgagc ttataacaac tcaaaaacaa gcggcaatcg atgcgaacag atcaaaatct
     4261 gcgtttttag ccaacatatc tcatgaaata agaactcctt taaatgggat aataggcttt
     4321 acggatctgc ttaaaaactc aaatttaaaa aaacaagaaa aagagcttgt aggagtgata
     4381 gaacaaagca gcgaaaattt acttagaatt ataaataata tacttgatat atcaaagata
     4441 gaaagccgta aagttgagct agacaatgaa gtattttcgc ctattaaaga gtttagtagc
     4501 gctgtggaac tctactcgca aaaagcgtat gaaaaagata tagaatttat atgttatatt
     4561 gatccatcgc taaacaagca tttagaaggc gattatttta aagtaaaaca agtacttata
     4621 aatcttatcg gcaatgcgat taaatttact cctcaaaatg gacaaatcat agtagatata
     4681 acaaaattag atgaaaatga agatggaaaa actacaatta aatttagcgt aaaagacaac
     4741 ggaatcggaa tcgataaaaa tatgctggaa aaaatatttg atagtttcat tcaagcaaat
     4801 aaagacataa caaaaattta cggcggcacc ggactcgggc ttagcatatc aaatgaatat
     4861 ataaaaatga tggactcgat tatcaaagta aaaagcgaac ttggagaagg aagcgagttt
     4921 agttttgtta ttaaatttaa aggcgcagac tctaaggatc aaaattattt tatggatttt
     4981 gcgggcaaaa cagttactgt ttttacaacc agaaaagata gtttatatga cgaatatcta
     5041 gaaaaatact ttgatttttt aggcattgaa acaaatatag tatatgatag caatgagctt
     5101 ttaaaattaa acaaagaaga tatagtggtt actaaattta aaaactacgc acgcctaaaa
     5161 acagatgcat tcgttctggt tttagcaaat accaaagaga tgcaaacaag cctagtagaa
     5221 gatagaaata taagctttat aaatgagcct ctatctataa ctaaattaaa aaaagcatta
     5281 gaaaaagcag attataaaaa aagacaaaaa tccaacgacg catactctca caaatacaat
     5341 atcagcgttt tattagcaac aaataatgaa aataaaacca aagacataga acatatctta
     5401 aaagagcttt gcgaaagagt agaagtggta aatgatgcaa aaagtgtcat tgagtatacg
     5461 caaataagcc attatgatat tatattttta gatatggtgc tagatgaaat gaacgctatt
     5521 ttatgtgcta aaaatatgat tcatcatgaa aaacaaaaca acttgccaca tactcatatt
     5581 atcggtatag taaatactat gtcaaattta aaccaaatta acgtagaaaa aaactatctt
     5641 gacgactata tacaaaaacg ctcttctaaa aatgaaatat tacaaatttt aaataatttt
     5701 acaccgcaaa acgcgataaa tttacgagct aaaataatag ctcctataaa taaaaaagtt
     5761 gaagccaaag aggagatagc aaatttaaaa gacgtattgc tgtttaaaaa aagcaatata
     5821 gaaaataaaa tattcagcac ggttttaaac ggattttgca gtagtgtcga tgtagtttgc
     5881 agctttgaag agctaaaaga atatcttcaa aactcagctt atagactagt tttattggat
     5941 tacaaaatac caaattttga atcaaacctg atatattcat ggataaatag ttcaagacaa
     6001 aaatacaaaa ttgatacaaa aactataatt tttatcgatc caaatgtaga aatagacgag
     6061 agtttagatg ataaatttga tgaaatactc acaagtctta tcaataaaac tcagttagaa
     6121 gctcgtatca aaccatatat caagtgagaa aatatgaaaa agattaatgt tctagtagta
     6181 gatgatgatg aaataagcct aaaactgctt gaactgatgc taaaaaacaa tcctttagta
     6241 gctcaaatca taaaagcaaa aaacggactt gaagggataa atatcttaga aagcaaattt
     6301 gatactgggc taattttact tgatttatct atgccggtaa tgaacggaat agaatttttg
     6361 ataaatttag aaagtagaga gtatctttct atgataccag tagttgttat aagcacggac
     6421 gaaaccaaaa aacaagaggt ttttaagcta ggagcttatg attttatact aaaaccgatc
     6481 agacaaaaag agcttaacat ggtagtagaa aatgcgatga atatcttgct ttagtttatt
     6541 ttaatctctt tgccaaacta tttttttacc aaatccaagt ctgttattcg tatatttgat
     6601 ataatcaatt cttatgacat aaagttccgg gtttagcaat tttgcataag gaaatctttt
     6661 aaaatatagt ttttctagtc gttcatcatc taaaagtttc ataactccgt ttgcttgaac
     6721 tccttctatt ttaccgacta tttttgtatc taatgctata tttatggcta tatttggctg
     6781 atttttgata ctttgtatat gttttgaact tgatttacta gctactataa acgagtttaa
     6841 atccggatca taagcataaa aacagctaca aagataaggc aatccatcgc ttataactcc
     6901 aagagtcaag atatgtattt tatccaaaaa cttagatata ttttcatcca ttttttatct
     6961 tttcaaattt aaaaatattt tatcacaaaa gcacttaaat attttttgat tataccgatt
     7021 tagagctcaa ggagttttca aatgacaaca caaaactacg ctaatgcatc ttataataat
     7081 tttgctttta actttaaaac cagctccgga gatagtataa acttatcgtt atacgataat
     7141 aaaaaattaa actattcaag ccaaaaagac ggttctagca gctcaaaaga gcttactctt
     7201 tctcatcaat acggatataa atttgagttc aactcaaacg gtcttagtga acaagataga
     7261 gccgaaatcg cacaagctat ggaggattta aagccgaaac ttgaagattt tatgaaaaaa
     7321 atcaaagaaa atgaaccatt ttcagatgac actataacaa acttagcaaa ctcacttaaa
     7381 aaagaccttc cgaatgtaaa aagtgaaaat caaaaaaatg cggtatctag cagtctttta
     7441 gatctttttg ataatataat cactaaaaac acagataaca acgtgttaga taaaaatatc
     7501 ttatatcctg caaataaact atttgaagag atgctaaaac agatggagag atttagcata
     7561 tatgcgtaat attgctttat tgtcatattt tttgtataat ttataaaaaa tagaggaaaa
     7621 ttttatgaca tatataaagc cgatagaaga aatgcttctt ttgcaacaaa aactaaacga
     7681 tgaaacaaac ggtacaaact gggaaacggg cataacaaaa gacggaaaac tcataagctg
     7741 gaaaagatgc atctatatgg aatgcgcgga acttgtagat agctttgcat ggaaacactg
     7801 gaaagctata aacaaagatc caaatttaga aaacgtaact atcgaaatag tcgatatctg
     7861 gcattttatt atgagtttag gacttgagaa ttatcataca aataaactcg gcgatatcca
     7921 tactttagct atcgatataa gctcttgcag cggatttagc gagttttgca aagaagctta
     7981 taacataaaa gagtacaata tctacgagat cataaacgat atcgaagtta ttataaacag
     8041 atgtagcgga tttgatataa attttttcga tcttttaaaa gactatttta gactatcgct
     8101 taaatgtggt gtaaatttaa gtaggctttt tgaagtttat atggggaaaa acgtactaaa
     8161 taaatttaga caagatcacg gatacaaagc cggaacttat aataaaaact ggaacggtaa
     8221 agaagataac gaagtaatga gccaaatttt agaatcaggt ataaactcta tggatgaaat
     8281 ttacgcaaaa cttaagattg agtatagcaa agttaaatga taaatataat aaatctttgc
     8341 ataggcgatt tttttaagaa aaaatttata ctattatcgc tcttgccgac ggtattttcc
     8401 gttatcgtat ttagttcgct tatgatattt ggcggaagcg aactacttat agcgttaaaa
     8461 aatttagcta gtaacggaga atttttggat aaagatggca tagtggcaac tatactatct
     8521 tttagcatcg taaaagcact tattttatca tcattttata tatttagcgg atttttcgta
     8581 attatcttaa gcagtgcatt agcaggaatt atagccggat ttttaacacc catagtaact
     8641 aaatatgtaa ataaaaaata ctacaacata aacatagatt ctgaagtaac aacttctaga
     8701 gttattaaaa tttctataat aactttttta aagtttatag ctattttgct aatttgtata
     8761 ccgtttttat ttgttccgtt tttgaattta tttatcataa atttaccgtt tttttatcta
     8821 ttttataaat ttatgctcat agatgttgct tcaaactgta tggataaaac aatgtttgaa
     8881 ataactatga taaaaggtgc tggcttagga ttcgctctta gcgcgatttt attttacctg
     8941 ctatgcttga taccttttat aggactgttt ttccagctgt tttttgttat gttttttacg
     9001 catttactat ttaaaaaaaa tcaaaatcaa taggtttcaa cattgaataa aatattaatt
     9061 tttctactcg tgtcaatact atgtgtgctt atgtatataa gcaaaagttt tttagttata
     9121 atatgcggag tctgcatatt tttatatgcc atggtggttt tagaaagtag cttttctatg
     9181 tttactgcta tagagaattt tcttaaaaag gccactagca gcagaatttc cggatttgga
     9241 tttggattta ttacggttgt cattatgcaa tcaagcggct tgattagcgt tttaacaata
     9301 tcgtttttaa gcgccggact tataagcctt gcttcaggac tctctatcat atacggagca
     9361 aatttaggta ccgttgtagg agcatggcta gttgcgggac ttggattgaa agtagatata
     9421 gcattatatg ctatgcctct tatcataata ggcgttttat ttatatttaa taaatccgaa
     9481 aaattaaaag gctgtggata ttttttactt agtataggac ttctgttttt aggtatcgct
     9541 tacatgaaat ccggatttga caacatcaaa gaaactatag atctctcaaa atacgctatg
     9601 acaggtataa gtgggctttt ggtttatact ttgatcggtc ttggcgtaac cgtgatctta
     9661 caaagttcca cagcgactat taccatagct ataacagctc ttggcgtaaa tcaaatcagc
     9721 tatgaaaatg cggtcgctat agctatagga tcaaacgtag gaagtacgat tatggcgatc
     9781 atcggctcga taaatgcaaa tcaagaaggc aaaaagctga tggtagctca cgtgatattt
     9841 aacgttacaa gcgctataat cacgctgatt ttcataaact ttttcatatt tatcaccgat
     9901 gaaacggcaa aagtcatcgg cataagaaat gatgattata cgatgaaact tgcgattttt
     9961 catacttatt ttaaccttac tggagttttt atattttatc cattaactgg tttgatggag
    10021 aaatttttaa ataaatatat caaatttgaa tacaaaagaa gtaaagtaga tagagcgtat
    10081 tatctaaata cggattcaat gcagttcagc gatagcgcac ttgaagtttt aacaaaagag
    10141 atgaaacacc tatatgcaaa cgcaagttcg atcatagcaa aatccataag tataagcaaa
    10201 tccgatatag cttcaaattt aagcgcagaa gaggtaatat ctatgcgcca aaatcctata
    10261 caaataaatt ttgacgagct atataacaac agatttaaag agatctacag tcagataata
    10321 gacttcgcta taacagcaag ctcaaaagct aaaaaagaag acgtaagtaa atttatggat
    10381 ataagacgcg taacgttgat gctagctgaa gcgctaaaag atatgaaaaa ctctcagccg
    10441 aatatctata aatttatgac ttcaaacaat atagatgcca aaaacgagta tgacaaatta
    10501 agaataaaaa tgctaaaaag tttaagaatt atggataaaa tagcaaatat aaatgatgga
    10561 agcagcttaa aaacagagtt aaaagagctc aaacagatat attatgacta tgaaaaagac
    10621 gagataaacc tagatacgct tctaggcggt aaaaaaatca cgaataaaat ggcaacgtct
    10681 ctcatgaacg atactgcctt gatacaaaat ataacaaaaa atatgctaag aataatagaa
    10741 gttatattta ttcacaacaa tagcaaagag gatttcgagt ttatcaaaca aagtatagga
    10801 gaaagttgag tttaatcaac cgttttttta cacaaactag ctaaaatgct ataaaacaaa
    10861 aggagaaaaa atgaaataca aatcaaaagt ttattgcaat atctgtcttg caaatgacag
    10921 tgaagagcca aacaaagttt ttatacaagc aactcataaa ggtgaaattg tcgatatatg
    10981 cacatcttgt atgcctacga taatacacgg ctcaggaatt gctataaaaa gcaatgatga
    11041 gattttggaa gagataaaat aaactatttt atcttatata cttttaaatt ttactaatta
    11101 ttttagttgt at
//
LOCUS       DAPPKW010000063        10878 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.063, whole genome shotgun sequence.
ACCESSION   DAPPKW010000063 DAPPKW010000000
VERSION     DAPPKW010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10878
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.063"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            228..665
                     /locus_tag="RPW04_001421"
     CDS             228..665
                     /locus_tag="RPW04_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDX6295510.1"
                     /translation="MQKIFEKFLFRIGSETVGVAKGIAPYKTGNLKKDIQVISVNDKS
                     ILIGNTTLAPYAKFVHYGTKPHIIKIKKAKALAWNSSGQTGSRGTKAFARKVNHPGTK
                     AQPYLENALDRYLSSGGFTRAKTALASEVKSKVISDIKKAFKS"
     gene            complement(723..1058)
                     /locus_tag="RPW04_001422"
     CDS             complement(723..1058)
                     /locus_tag="RPW04_001422"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295511.1"
                     /translation="MENRKFTIGYGGIEWDICEKNWEYHDKKSDNNLNNLNRVDDNGV
                     ISYIFGILPVLDEDPKYKKLGEICDFEVLSNGHKFTGTFIDALEYIRVNFGSHSQIYT
                     EFSSLSQKR"
     gene            complement(1070..1405)
                     /locus_tag="RPW04_001423"
     CDS             complement(1070..1405)
                     /locus_tag="RPW04_001423"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295512.1"
                     /translation="MRKFDIWIKRDYEFHMIEQGYQTNNKNQNKDMFKRYFFAGIEME
                     GSEIKYIFDLPYFDSLTLELIKKDDIFSEICEFDITMTNINWEDTKIKKKFSLYDAFV
                     FIDEYARSL"
     gene            complement(1402..2637)
                     /locus_tag="RPW04_001424"
     CDS             complement(1402..2637)
                     /locus_tag="RPW04_001424"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295513.1"
                     /translation="MIYDKDLLSKLLKSKIAKSKSKDEIIDELLSYLDKENQKALKNA
                     LDELFLMIVTHKDDANLQKLIANKINALELNIPNIEYEEIYSKFASEVMFENKINNVP
                     PTFSFDETDIKALEVMRKNFYWMKNDYNEKISNDLKAITAKVFNGEITRANMAETLKE
                     KFKGVLSANTSYFEGVSDHIISQAQNIARVNQSSKYGVKHYKVLARIDSRTSDICRSM
                     NGRIIPASHIEAQSNNIQNAKDINEKKAAAIWRNEPFLGKILPSNFGLPPYHFRCRTE
                     LVPVWIDNEDVGGVTMTNTSPLNKDEVIKHIDKTGVERVLSKENYFGGNHTKPLNERY
                     SKKDFISALNSITQIAPYTSKENRANALTQNNCVLSFNGDEIVTMIKFENKQDAQAYF
                     RKNVAWDKREIIKTRWWLG"
     gene            complement(2627..2833)
                     /locus_tag="RPW04_001425"
     CDS             complement(2627..2833)
                     /locus_tag="RPW04_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009649640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295514.1"
                     /translation="MICPFCSNVKTSVVATIKGLENRRFRRCNKCNKTFETSEKVLIK
                     PLDFDYLNNEYKEFVEEEKDKNDI"
     gene            complement(2837..3265)
                     /locus_tag="RPW04_001426"
     CDS             complement(2837..3265)
                     /locus_tag="RPW04_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295515.1"
                     /translation="MTEKQTLLRRQLLSKIHTTKRYKELKENDAWETFLDCYFGATSS
                     AVLSIKELENCLDLLYGKSTTINDIDLKGRELIARAKKELSSPSQANRLKNAMVRLGW
                     SEEMLKSFVVKKLKIIADPFKMNVKNTSKLIFILEKIKKR"
     gene            complement(3222..3695)
                     /locus_tag="RPW04_001427"
     CDS             complement(3222..3695)
                     /locus_tag="RPW04_001427"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295516.1"
                     /translation="MEFSFGNIKPKLDRYKLGMGLAKAGFNESLHRYIESVICDDEKL
                     TIILSHNLAKLEFDHSKEQFLSKARVYYKDHARDFEALNFIPKRIEAKVVFKSNDKFK
                     NDPLGAPTPINPPKKVSTAQFENRAKDPLINAGFENIRKVIYDRETNAFKKTTIK"
     gene            complement(3755..3961)
                     /locus_tag="RPW04_001428"
     CDS             complement(3755..3961)
                     /locus_tag="RPW04_001428"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295517.1"
                     /translation="MCYMMEREIKKERQSKNMSNLALILNDLDEMIEELSEAISVDDE
                     QEIYENAKALVEYYYKTKKSLKLD"
     gene            complement(4019..4432)
                     /locus_tag="RPW04_001429"
     CDS             complement(4019..4432)
                     /locus_tag="RPW04_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295518.1"
                     /translation="MLVKIGKTETKIHDKSLENAVNEFAYLKQKIDSLNDELKAFKEI
                     IINKASEQLLGSDSLSVSFESMNENKVKVSFGWDVKVSNPDTLAVLLGDKFDLLVKSE
                     MTYKAEKRLKELALNDDGLKECLEIKEKAPSVSLI"
     gene            complement(4526..4798)
                     /locus_tag="RPW04_001430"
     CDS             complement(4526..4798)
                     /locus_tag="RPW04_001430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295519.1"
                     /translation="MATIEVDIDIYEHMDIDDVLCYLEENEILIDDRKKILKILNSTA
                     VNAPENMIKDYCYKMSFEEAMSYVRWLSHYHGNKILIQEITDGKFA"
     gene            complement(4811..5029)
                     /locus_tag="RPW04_001431"
     CDS             complement(4811..5029)
                     /locus_tag="RPW04_001431"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295520.1"
                     /translation="MIIELRYLICFLCMLRFESYERQKPLNNRIKELWDYHRAFVLDY
                     MYDVFDSSIEKHIIHTEKYAYEILSNYK"
     gene            complement(5013..5258)
                     /locus_tag="RPW04_001432"
     CDS             complement(5013..5258)
                     /locus_tag="RPW04_001432"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295521.1"
                     /translation="MLSAGEYKELGFLMCVFGLINTQKDEANNEDIKVLEAFGEDISK
                     LINRYEIADQQKAKTKAKKFLNAIVNRADKKRCDNRT"
     gene            complement(5251..5400)
                     /locus_tag="RPW04_001433"
     CDS             complement(5251..5400)
                     /locus_tag="RPW04_001433"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295522.1"
                     /translation="MSKTLAELEIKKELSRIEEQLKGNTNFNQIQSLKLQKKRLLKLL
                     KDIYA"
     gene            complement(5397..5729)
                     /locus_tag="RPW04_001434"
     CDS             complement(5397..5729)
                     /locus_tag="RPW04_001434"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295523.1"
                     /translation="MQNLMGRNKELRQLYSRIGSKWIMKGLSKDECKNYFSSLKPSAD
                     KSAFSSGFTKGTSDYADCGELIFEWCAGNFRSSAKLYKKALKLSEYYQVPLDKQVIAK
                     ASEMVVLA"
     gene            complement(5737..6342)
                     /locus_tag="RPW04_001435"
     CDS             complement(5737..6342)
                     /locus_tag="RPW04_001435"
                     /inference="COORDINATES: protein motif:HMM:NF024793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDX6295524.1"
                     /translation="MDKQQDVKNELNTFLISQEVSASALARSIGVSPGAISQFKKGEY
                     KGDNDGLAKKIKAYLNVQNAKKNEPVEVVEFKDDVFKSLDYQMSNFAIDEAANEREIA
                     LIYGTAGTGKTTILKEYVKANPNAVFIEATPHTTAKSLLDDLAEVLKINLPLSLAGKL
                     KAVARYLSTCSKILLIDEAEHLPLKALEDLRRIHDFSTCRH"
     gene            complement(6759..7442)
                     /locus_tag="RPW04_001436"
     CDS             complement(6759..7442)
                     /locus_tag="RPW04_001436"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295525.1"
                     /translation="MDDYVDEFINQRWMDRLGKSPLEAYKMCEDKVQKLSSMVVCARL
                     GKMLTKKVHKKGIIHDNAYYVCAKSFAFDAVKIVPNINNVDEVYIWSVLGEFIGVGTR
                     LNDGEGVSAEIAKEARSFSKNKIDKARKAVNKATITNQDSFVEHVQYVKSLRVCEDGN
                     AALEYEDELTAKIKTEHKRAKSLRVVSELLMPAGVPHNSGALEKRGETSFASKPKSIE
                     ISWEGMLKK"
     gene            complement(7427..9508)
                     /locus_tag="RPW04_001437"
     CDS             complement(7427..9508)
                     /locus_tag="RPW04_001437"
                     /inference="COORDINATES: protein motif:HMM:NF012870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDX6295526.1"
                     /translation="MWVDSKRAADVLGVKYDALVKSVKRAEKQGKKFCTIKPNILSFI
                     YVEGIGRGGKVLQIWVDEQSDKSNAGVYGSAKKKSEATKDTNKGANNENISNTAINGF
                     LGAKGLQGNSVSTKWQGEYQGSEALQSNIAKDSFTKRESGINDENNITNEQNGANSDR
                     GLDEYSEYRRDKQDNQITNIAKCDKTGNQTQEKSMDKSCQSRINGEINDTQDKQNLGE
                     IRRGVLPSGKHNNADMGVAYMARDNILRVGHPNAFAPAEQSPASAALLKPHKWGTPKS
                     EATKDKNNELEELFNATNIADDKKADAYMKAKICKIWLKNKEKISKIQGAPRKSGALV
                     KRGETSFASKTKSIDAFLSYINLNKMYDKKVSKGLMYDWLRRYENGGIKALVDTRGGN
                     KPLSVELLGYKEKIDELIMASGGKITAYNVYNRFHHTCVQMGLLTHDEFISKEKYILS
                     YDNINRYVNKWKKENPTTALYIEKGYDGAINSKLGAVGKANWKADFANEYVEIDATTL
                     DMFAKKINLDLASEIWKINKDAFRDFDECKERVAENQKRYTVVGMIDVFSGVCSYHIG
                     KSENIYSVKRCLAKYIAKFGKPITVVGDNGKAFKSHEMQGTFDSLDIAYQAVRAYSGW
                     LKPYIERSWRSFQDNFSQNLAGFIGHSVVQRQAIEFGFSKMERRLKKGEQTNLKRMLL
                     YLILESSWMTM"
     gene            complement(9510..9671)
                     /locus_tag="RPW04_001438"
     CDS             complement(9510..9671)
                     /locus_tag="RPW04_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009649786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295527.1"
                     /translation="MKKPTIAKLVKSKTKYDLKGYCEMRGLSHLSLYKGYVAKKARKV
                     LERDGIKVA"
     gene            9917..10699
                     /locus_tag="RPW04_001439"
     CDS             9917..10699
                     /locus_tag="RPW04_001439"
                     /inference="COORDINATES: protein motif:HMM:NF024835.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009651001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HDX6295528.1"
                     /translation="MDFDILAQNIRFLLKKHKWSEDELVKRSGVGKSTIQLYKSKKSK
                     NPTVDKLTKIANAFKVSSDDLKNKNLSISMSISQKENISQNVHKFPKMSISKSNLSSN
                     EPLNTPNLKKSQNEIHINIKEDTVYVPFFKDGAVSAGFGTEDFANDCDFLPFKKQDLR
                     LMFNAHSTANLAVIPCVGNSMQPTIEEGELVVFQQDGTQSEGAIYVVRFENELFVKRL
                     KKRPLQLISDNANYEPISLNESQSFEILGRVIGSYSIHSKRF"
BASE COUNT         2977 a         2157 c         1656 g         4088 t
ORIGIN      
        1 ttggctttat ctcatgttag cgtggttaag gctaaaaagg gtggtggggc gttgattatc
       61 tagacttgtc tgatgggtgc tttagcagag ttttactctg tgttaaaagt ataaagatgt
      121 agcccacgaa gttgggcgtt taactttagg taggtaaagg gagcgttagc tccttgttgc
      181 aaagcggggc ttttgctccg ctgcgaagtc aaaatgtagg acacaatatg caaaaaatct
      241 ttgaaaaatt tctatttagg attggcagtg agacagttgg cgtcgccaag ggcattgcac
      301 catataaaac tggtaatctt aaaaaagaca ttcaagtaat tagcgtaaat gataaaagca
      361 tcttaatagg aaatacaacc ctagcacctt atgctaaatt tgtccattat ggcacaaaac
      421 cacatattat taagataaaa aaagctaaag ccttagcatg gaatagttcg gggcagactg
      481 gttcgcgtgg cacaaaagca ttcgcaagga aggtaaatca tccaggcact aaagctcagc
      541 catatttaga aaatgctttg gatagatatt tgagtagtgg aggatttaca agggctaaaa
      601 ctgcccttgc aagtgaagta aaaagtaagg ttataagtga tatcaaaaag gcttttaaat
      661 cataaaattt acacaaaaga ctttttatct tgcagatgag ctaacaaaaa aaacgataca
      721 aattatcgtt tttgacttag cgaactaaat tcagtgtaaa tttggctgtg tgacccaaaa
      781 tttactctta tgtattctaa tgcatctata aaagtgcctg tgaatttatg cccatttgat
      841 aatacttcaa agtcgcaaat ctcgcctagt tttttatatt ttgggtcttc atctaaaaca
      901 ggaagtatcc caaaaatata acttataacc ccattatcat ctactcggtt aagattattt
      961 aggttgttat cgcttttttt gtcgtgatat tcccaatttt tttcgcatat atcccattct
     1021 atgccaccat aacctatagt aaatttgcga ttttccattt tatcacctct tataaacttc
     1081 tcgcatattc atctataaaa acaaaagcat catacaaact aaactttttt ttgatttttg
     1141 tatcttccca attgatgtta gtcatagtta tatcaaactc gcaaatttcg ctaaaaatat
     1201 catctttttt tataagctca agagttaaag agtcaaaata tggcaaatca aatatatatt
     1261 ttatctcact accttccatc tcgataccag caaaaaaata tcttttaaac atatctttat
     1321 tttgattttt gttatttgtt tgataccctt gttctatcat atgaaactca taatctcttt
     1381 ttatccaaat atcaaatttt ctcatcccag ccaccatctt gttttgataa tttctctttt
     1441 atcccacgcc acattttttc taaaataagc ttgggcatct tgcttattct caaattttat
     1501 catagttact atctcatcac cattaaagct aagcacacaa ttattttgtg tcagagcgtt
     1561 tgctctattt tctttgctag tatagggggc gatttgtgtt atggaattta aagcacttat
     1621 aaaatccttt ttactatatc tttcatttaa gggttttgtg tgatttccac caaaataatt
     1681 ctccttgcta agcactcttt caaccccagt tttatctata tgttttataa cttcgtcttt
     1741 atttaatggg cttgtgtttg tcatagttac gcctcccaca tcctcgttat caatccacac
     1801 aggcacaagc tcagtgcgac atctaaagtg atatggtgga agcccgaagt tactagggag
     1861 tattttaccc aaaaaaggct catttctcca aatagcagct gcttttttct cgtttatatc
     1921 tttagcgttt tggatattgt tgctttgagc ttctatatgg ctagcaggga ttatacgtcc
     1981 gttcatactt ctacagatat cacttgtacg gctatctatc ctagctaata ctttgtaatg
     2041 ctttactccg tatttactag actgatttac tctagctatg ttttgagcct gacttataat
     2101 gtggtcgctc actccttcaa aatagctagt atttgcactt agtacgcctt taaacttctc
     2161 ttttaaggtc tctgccatgt ttgctcttgt tatctcgcca ttaaagactt ttgccgtaat
     2221 agcttttaga tcattgctta ttttttcgtt gtagtcattt ttcatccagt aaaaattctt
     2281 acgcattact tcaagtgctt tgatatcagt ttcatcaaag ctaaatgttg gcgggacatt
     2341 gtttatctta ttttcaaaca tcacttcact tgcaaattta gagtaaatct cttcatattc
     2401 tatatttggg atatttagct caagcgcgtt tatcttattt gcgattagtt tttgcaaatt
     2461 tgcatcatct ttgtgagtta ctatcatcaa aaatagctca tcaagtgcat tttttaaggc
     2521 tttttgattt tctttatcaa ggtagcttaa aagctcatct ataatctcat ccttgctttt
     2581 tgattttgcg attttgcttt ttaatagttt agatagcaag tctttgtcat atatcatttt
     2641 tatccttttc ctcttctaca aactctttat attcattatt tagatagtca aaatcaagcg
     2701 gttttatcag tactttttcg cttgtttcaa atgtcttatt acacttgtta caccgcctaa
     2761 aacggcgatt ttcaagccct tttatagtcg ctactacgct ggttttgaca ttactgcaga
     2821 atgggcatat cattatttac ctttttttta ttttctcaag aataaaaatt agtttgctag
     2881 tattctttac attcattttg aatggatctg cgatgatttt tagcttttta accacaaaac
     2941 ttttaagcat ttcttcactc cagccaaggc gaaccatagc gttttttagc ctatttgctt
     3001 gacttgggct gctaagctct tttttagctc ttgcgattag ctctctgcct tttaggtcta
     3061 tgtcatttat ggtggtactt ttaccataca acaaatcaag acaattttca agctctttga
     3121 tacttaaaac tgctgagctt gtagccccaa aataacagtc caaaaatgtc tcccaagcat
     3181 cattttcttt tagctcttta tagcgttttg tagtgtggat tttacttaat agttgtcttc
     3241 ttaaaagcgt ttgtttctcg gtcatatatt acctttctga tattttcaaa tccagcgttt
     3301 ataagtggat ctttagctct gttctcaaac tgggctgtgg atactttttt tggtgggtta
     3361 ataggcgttg gggcaccaag tggatcgttt ttaaacttat cattgctttt aaaaacaact
     3421 ttagcttcta tcctttttgg gatgaaattc aaggcttcaa agtctcttgc atggtctttg
     3481 taatacactc tagctttgct taaaaactgt tctttactgt gatcaaactc aagcttagca
     3541 aggttatgag aaaggatgat tgtcagtttc tcatcatcgc aaatcacact ctcaatgtag
     3601 cggtgcaagc tttcattaaa tccagcctta gctagcccca tgccaagctt atatctatca
     3661 agcttaggct ttatattgcc aaaagaaaat tccatatcta tatcctttaa accactttat
     3721 caagccttta aaagcttttt aaaggctttg taaattagtc taatttcaaa cttttcttag
     3781 ttttatagta atactccaca agagctttag cattctcata tatctcttgt tcatcatcaa
     3841 cgctgatagc ttcactaagt tcttctatca tctcatcaag atcatttaag atcaaagcta
     3901 aatttgacat attttttgat tgtctttctt tttttatctc tctttccatc atataacaca
     3961 tcttttctcc ttaaatttat aagacttaat tgagtggtct aaaaccactc tataaatctt
     4021 agattaagct cacacttggt gctttttctt ttatctctaa gcactctttt agcccatcat
     4081 catttaacgc tagttctttt agcctttttt ctgctttgta agtcatctca gacttgacaa
     4141 gtagatcaaa tttatcgccc aaaagtacgg ccaaggtatc tgggttgctt actttcacat
     4201 cccaaccaaa gctcactttg accttgtttt cattcatact ctcaaaactc acgctaaggc
     4261 tgtcactgcc taataattgc tcgctagctt tatttatgat tatctctttg aacgctttta
     4321 gctcatcatt taaactatct attttttgtt ttagataagc gaactcattt actgcatttt
     4381 ccaagctttt atcatggatt tttgtttcgg ttttgccgat ttttactaac atttttttcc
     4441 tttttttggt ttatctttta gtttaggctt ttgggcttta gtagcgtttt cattcgttgc
     4501 gacttcacgc gtattggcca actttttatg caaacttgcc atctgttatc tcctgtatta
     4561 aaattttgtt accatgataa tgacttagcc atctaacata gctcatagct tcttcaaagc
     4621 tcatcttata gcaataatct tttatcatat tttcaggtgc atttactgca gttgaattta
     4681 aaatctttag tatttttttt ctatcatcaa ttaatatctc attttcttca agatagcaga
     4741 gtacatcatc aatgtccata tgttcataaa tatctatgtc tacttctatt gttgccattt
     4801 tttttctcct ttatttatag ttgctaagta tttcatatgc gtatttttct gtgtgaatta
     4861 tgtgtttttc aatgctacta tcaaacacat catacatata atcaagcaca aacgccctat
     4921 gataatccca aagctctttt atcctattat ttagtggctt ttgcctttca tatgattcaa
     4981 agcgaagcat acataaaaag caaattaagt atctaagttc tattatcaca tctttttttg
     5041 tcagctctgt ttacaatcgc atttaaaaac ttcttagcct tagtttttgc cttttgttga
     5101 tctgctattt catatctatt tatcagcttt gaaatatctt caccaaatgc ttcaagcacc
     5161 tttatatctt cattattggc ttcatccttt tgtgtgttaa taagtccaaa aacacacatc
     5221 aaaaagccaa gctctttgta ttcaccagca ctaagcatat atatccttta acaattttaa
     5281 aagtcgcttt ttttggagct ttagggattg aatttggtta aaatttgtat tgccttttaa
     5341 ctgctcttca atcctgctaa gctctttttt tatctcaagt tctgctaatg ttttgctcat
     5401 gctaaaacca ccatttcgct agcttttgca atgacttgtt tatcgagtgg aacttggtag
     5461 tattcactta gtttcaaagc ctttttatag agctttgcac tgcttctaaa gttgcccgcg
     5521 caccactcaa atatcagctc accacagtcc gcatagtcgg acgtaccttt agtaaaaccg
     5581 ctgctgaatg ctgacttgtc agcagacggc tttagcgatg aaaaatagtt tttacactca
     5641 tctttactaa gacctttcat tatccatttt gagccgatac gactgtaaag ctggcgaagt
     5701 tctttatttc tacccattaa attttgcaaa agtatctcag tgccgacaag tactaaagtc
     5761 gtggatgcgt cttaagtctt caagtgcttt taatggcaaa tgctcagctt catcgataag
     5821 caatatctta gagcaagtac ttaagtatct tgcaactgct tttagcttac cagctaggct
     5881 taatggcaag ttgatcttaa gcacttctgc aaggtcatca agtaagcttt ttgccgtagt
     5941 gtgtggcgtg gcttcgatga atactgcatt tggatttgct tttacatatt cttttagaat
     6001 tgttgttttg ccagttcctg ctgttccgta gattagtgct atttcacgct cattagcagc
     6061 ttcatctatt gcaaaattac tcatttgata atctaagctc ttaaagacat catccttaaa
     6121 ctctactact tcaactggct catttttctt agcattttga acgtttagat aggcttttat
     6181 ctttttagca agcccatcat tatctccttt atattcacct tttttaaact ggcttatcgc
     6241 gccaggacta actcctatgc ttcttgctaa cgcagacgcg ctaacttctt gactaattaa
     6301 aaaagtgttt agctcatttt ttacgtcttg ctgtttatcc atttttttct ccttatttta
     6361 ggtttttaac cctttttggt agtggtgggg cttagctcag ctggtgcaaa agcattggta
     6421 gtggtggtaa cttactaaaa taaggagtta cgagatttac caccaccaaa aaaggttaaa
     6481 tttgacaata aaaagttaaa aaacttgttt tttgtttaga gtttcatata aaatttacac
     6541 aaaagtaaaa tcgcaggatt ttactgtgta aatttggatg tgtgacccat aatttactgg
     6601 cattaacacg gctcgttaaa cccagcttca aaaacggctt ttaaaaacgt ttaaaaacta
     6661 tcccaaattt acaccgactt ttcatcattt agataaaaag tcttttgtgt aaatttcatt
     6721 ttaaacgctt ttaaaaagtg tctttaaata cctttaaatc acttttttaa cataccttcc
     6781 cagcttatct ctatgctttt tggcttacta gcaaagctag tttcgccacg cttttctaaa
     6841 gccccactgt tatggggtac cccagctggc ataagtagct cacttactac tcttagactt
     6901 tttgctcttt tatgctcagt cttgattttg gctgttaatt catcttcata ctctagtgct
     6961 gcatttccat cttcgcaaac tcttaggctt tttacgtatt gcacgtgttc tacaaagcta
     7021 tcttgattcg tgatggttgc tttattcacc gcttttcttg ctttatctat cttatttttg
     7081 ctaaaagacc ttgcttcttt agctatctct gcgcttactc cctcgccatc atttagtcta
     7141 gttcccacgc cgataaactc tcccaaaacg ctccatatat acacttcatc tacattattt
     7201 atatttggca ctattttcac ggcgtcaaat gcaaagctct tagcacacac gtagtaagca
     7261 ttgtcgtgta tgatgccttt tttgtggact tttttagtta gcatcttgcc aagacgtgca
     7321 caaactacca tgcttgatag tttttgcacc ttatcttcac acattttata tgcttcaagt
     7381 gggctcttgc ctagtctatc catccatctt tggttgataa actcatctac atagtcatcc
     7441 atgagctttc caagatcaga taaagtagca ttctttttag gttagtctgc tcaccttttt
     7501 taagtcttct ttccatcttt gaaaatccaa actcaatggc ttgtctttgc acaactgaat
     7561 gccctataaa tccagctaga ttttggctga agttatcctg gaagcttctc caacttctct
     7621 cgatgtatgg ctttaaccag ccactatatg ccctaactgc ttgatacgcg atatctaagc
     7681 tatcaaatgt tccttgcatt tcatggcttt taaatgcctt gccattgtct cctactactg
     7741 tgataggttt gccaaatttt gctatgtatt ttgcaaggca gcgtttaaca ctatagatat
     7801 tttcgctctt gcctatatgg tagctgcaaa cgccactaaa tacgtctatc attccaacaa
     7861 ccgtatatcg tttttggttc tccgctactc tttctttgca ctcatcaaaa tccctaaatg
     7921 catctttatt tatcttccat atctcactag caaggtcaag gttgattttt ttggcgaaca
     7981 tatcaagagt agtggcatct atctctacat actcattagc aaagtctgcc ttccagttag
     8041 ccttgcccac agctccaagc ttggagttta tagccccatc gtagcctttt tcgatatata
     8101 gagcagttgt tgggttttct tttttccact tatttacgta tctgttgata ttgtcatagc
     8161 ttaagatata tttttcttta gagataaact catcgtgagt gagtaaaccc atttgtacgc
     8221 aagtgtgatg aaagcggtta tatacattat aggcagttat tttgccaccg cttgccatga
     8281 ttagctcatc tattttttct ttgtagccta gcagctccac gcttaggggt ttattgcctc
     8341 cacgagtatc tactagagct tttatcccgc cattttcata gcgtcttagc cagtcataca
     8401 ttagaccttt tgataccttt ttgtcataca tcttatttag gttgatgtat gaaagaaaag
     8461 catctatgct ttttgtctta ctagcaaagc tagtttcgcc acgctttact aaagccccac
     8521 ttttgcgggg tgcaccttgt atttttgata ttttttcttt gttttttagc caaattttgc
     8581 aaattttagc tttcatatat gcatcagctt ttttatcatc agcgatattt gtggcgttaa
     8641 atagctcttc taattcgttg tttttatctt ttgtagcttc gctttttggg gtaccccact
     8701 tgtggggctt tagtaacgcg gcactagctg ggctttgctc agcaggtgca aaggcattgg
     8761 ggtgacccac tcttaagata ttatctctag ccatatatgc cacgcccata tcagcattat
     8821 tatgtttgcc actaggtaaa acaccgcgtc gtatctcgcc caaattttgc ttatcttgtg
     8881 tatcatttat ttctccgtta attctgcttt ggcagctttt atccatgctc ttttcttgcg
     8941 tttgattgcc agttttgtca catttggcga tatttgtgat ttgattatct tgcttatctc
     9001 ttctatactc agagtattca tcaagaccgc gatcgctatt agctccgttt tgctcatttg
     9061 tgatattgtt ttcatcgttt atgccacttt ctctttttgt gaagctatct tttgcaatgt
     9121 tgctttgcaa agcctcactg ccttgatact caccttgcca cttagtgctg acactattac
     9181 cttgtagccc ctttgctcca agaaatccgt taattgcagt atttgagata ttttcattgt
     9241 tagctccttt atttgtgtct tttgtagctt cgcttttttt cttagctgag ccataaactc
     9301 ctgcgttgct tttgtcactt tgctcatcca cccaaatttg aaggacttta ccgccgcgac
     9361 ctatgccttc cacataaata aaacttaata tattaggttt aatagtgcaa aattttttgc
     9421 cttgtttttc tgctcttttt acagatttaa caagtgcgtc atattttaca ccaagcacgt
     9481 cagccgctct cttactatct acccacatat tacgctactt ttatcccgtc acgctcaagc
     9541 accttgcgag ctttttttgc cacatatccc ttatatagac ttagatgcga gagcccacgc
     9601 atctcacaat agccttttaa gtcatactta gtcttgcttt ttacaagctt agctatagtt
     9661 ggctttttca tatttttact cctttatttg atatattttt attgttaaac caagttttat
     9721 cttctcattt ttgcactttt ttttaacttc gtttagcttt tttacaaaaa cttcactcat
     9781 ttttatctcc ttaaaagttg gtttaacaat aaaaatttaa ataacatttg tcaaatttgt
     9841 atttttgtga tacaattttt ctaaataaac attgaaatta taacttatta tattaagttt
     9901 gtcaagggta aaagatatgg atttcgatat attagctcaa aatattaggt ttttattaaa
     9961 gaaacataag tggagcgaag atgaattagt taaaagatct ggagtgggaa aatctacaat
    10021 acaattatat aaaagtaaaa aaagtaaaaa cccaactgtt gataaattaa caaaaatagc
    10081 aaatgctttt aaagttagtt ccgacgattt aaaaaataaa aatttgtcca taagtatgtc
    10141 cataagtcaa aaagaaaata tttcccaaaa tgtccataag tttccaaaaa tgtccataag
    10201 taagtcaaat ctgtccagca atgagccttt aaacactcca aaccttaaaa agtcacaaaa
    10261 tgaaattcat ataaatatca aagaagacac ggtctatgtt ccgttcttta aagacggcgc
    10321 cgtaagtgca ggatttggca ctgaagattt tgcaaacgac tgcgacttct tgccatttaa
    10381 aaaacaagac cttagactta tgtttaacgc acatagcacg gctaatctcg cagttatacc
    10441 atgcgtagga aactcgatgc agccgaccat agaagagggt gagctagtag tattccagca
    10501 agatggcacg caaagcgaag gcgctatata tgttgtaaga tttgaaaacg agctttttgt
    10561 caaacgcctt aaaaagcgcc cattgcagct tatcagtgac aatgcgaatt atgaaccgat
    10621 tagtttaaat gagtcgcaaa gctttgagat tttgggtaga gtgatcggat cgtactcaat
    10681 ccattcaaaa cgcttttaaa cgtgatttaa tgggctttta aacgattttt taaaagcttg
    10741 taaagtttgt gaaaagaaaa tgtaaagaag tgtaaagtca aatttgccag ttcgattttg
    10801 ctaaaaatac tctcaaatat cgctaaaatc aatatctcag ctattttagt atcagttaga
    10861 tttcaaacaa ctctttac
//
LOCUS       DAPPKW010000064        10336 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.064, whole genome shotgun sequence.
ACCESSION   DAPPKW010000064 DAPPKW010000000
VERSION     DAPPKW010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10336)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10336)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10336
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.064"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(56..2032)
                     /gene="uvrB"
                     /locus_tag="RPW04_001440"
     CDS             complement(56..2032)
                     /gene="uvrB"
                     /locus_tag="RPW04_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HDX6295529.1"
                     /translation="MDKFEISSKFKPSDDQEKAVTNIVDSIRSGNKFNVLLGVTGSGK
                     TFTMANVIKRLNMPTLIMTHNKSLAAQLYSEFKGFFPKNHVEYFISYYDYYQPEAYIP
                     RQDLFIEKDSSINEELERLRLSATANLLEFDDVVVVASVSANYGLGNPAEYKGMVLLL
                     SLGMSLNQKELLLKLVDMGYKRNDAYFDRGDFRVNGDVVDIYPAYFNDEAIRLEFFGD
                     ELDAMYHFDVLENKRTKDVSKFILYATSQFIVGENRLKQAIKDIELELEDRLAFYEKE
                     NRLVEYQRLKQRVEFDLEMLSSTGSTKGVENYARYLTGQKAGETPYSLFDYFEVSGKD
                     YLVIVDESHVSLPQFRGMYAGDRSRKEVLVEYGFRLPSALDNRPLKLDEFIAKKANYL
                     FVSATPNQYEIDLSQGHVYEQILRPTGLLDPRIEVISSDNQVEVLFDRAKAVIARGER
                     VLVTTLTKKMSEELTRYYQELGIKVKYMHSDIDAVERNELIRGLRKGEFDMLVGINLL
                     REGLDLPEVSLVAVLDADKEGFLRSRTSLIQTMGRAARNVNGTVILFANKITNSMKEA
                     IDTTEARRKYQGDYNKKYGITPRSASRNLEDSLKEEDLPNLYNKAKKLEKMPASERAK
                     IVKELRKQMLEAAKNLEFEKAAALRDEIAKLREL"
     gene            2224..2457
                     /locus_tag="RPW04_001441"
     CDS             2224..2457
                     /locus_tag="RPW04_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295530.1"
                     /translation="MFENEKVLNTLASKVTELMLKYEEVCENNEALRNELVSVKAQNE
                     AKTNQIMRLEEELKNQNLASDDLLKQVEAVLGR"
     gene            2454..2678
                     /locus_tag="RPW04_001442"
     CDS             2454..2678
                     /locus_tag="RPW04_001442"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295531.1"
                     /translation="MKQIILTIASKDYTIRLEDEFAEAFGEDIKNLLQDKYQFGVKDL
                     LTAFIQKCHEAYIQKEQMDKLLGDLDKTLK"
     gene            2723..3274
                     /locus_tag="RPW04_001443"
     CDS             2723..3274
                     /locus_tag="RPW04_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005308483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HDX6295532.1"
                     /translation="MKEKSTILLSRGFTMMEILFVIVILGILASIAVPRLVANKQDAQ
                     ISQLKSQITTIREGIRDYANQQRLAKKSEKKDIYPEQLEEGEIKNRPNLFEYVISTPI
                     KSNGVGWLPNNAIAKTQGWSDQTDYGTRYLYSLGNGKVDEVITMDYCSPTTTKRTDRC
                     NDDNIGDFICVTGCNKIEEKPHP"
     gene            3294..3917
                     /locus_tag="RPW04_001444"
     CDS             3294..3917
                     /locus_tag="RPW04_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HDX6295533.1"
                     /translation="MKKAFSLVELVFVMVILGILASFIIPSFSAKKQDADIATIKIQI
                     AAIRAGIRDYTTSQIISGKTKQTLEVKDIPKKWDENKNDTIYPLFLEDFGDHKELFST
                     VLPNPIKGTSNNTQNGWSRQNSSNKLTYEGRYFIRFGKEAIRFDYCSIATQTESSKQI
                     CPPTNDTDKYKYMGKFYCSDSDKKNAVCWVKNKFNKYKIYKKERLAL"
     gene            3914..4675
                     /locus_tag="RPW04_001445"
     CDS             3914..4675
                     /locus_tag="RPW04_001445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295534.1"
                     /translation="MNIKFKKYIRGGVRGFTVIEIVFVIIILGMLASILVPRLVANKN
                     DAEIAKVKMQISAIRRGIEYYKAAQMGKGYYDELYCFTKCSPQGNSAQENGGRSKFDM
                     DFLKTRNKGVYPMMLDQSRNNKGSDYRLLFKMVLATPIKGAENNNEKGWSRINNSGGD
                     PYDGRYFLRVANKSIIFDYCSPTLHKYNDSMCSKGGKFIPSLNGKFFCIGQPSSATRA
                     DRIADCALLGEEYIDSQTLDTIEDPSYWSDPAETI"
     gene            4702..5112
                     /locus_tag="RPW04_001446"
     CDS             4702..5112
                     /locus_tag="RPW04_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008338766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HDX6295535.1"
                     /translation="MRKAFTMIEIVFVIIILGILASIAIPIFNINREDAQIAKAQVEL
                     ATIRSVIALKRSDSFLISDESVIDLNDVLKEAEVSTQYNTSSDYLLRWSVNEANLKLD
                     IKNNVTVTFSIDKNGNLYCDPNANDLCKKIEKKL"
     gene            5120..6952
                     /locus_tag="RPW04_001447"
     CDS             5120..6952
                     /locus_tag="RPW04_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDX6295536.1"
                     /translation="MNYYEIALSGLNLKPLTYESKFDIEIFSAVSVKVKNRICNGFVI
                     KSVEKPKFKTSAILEILPQKLTQIQIKLAEFISRYYTCEIGVCLGLFEPYHEISNMNY
                     SFIKSPELSQKQQNALEFIKQNSVSLLFGDTGSGKSEVYISLIKEVLNENKQALLLMP
                     EISLTPQMQTRLESYFGSSVGIWHSKITPKNKKILLERFFRGEIKLIAGARSALFLPF
                     WNLGLIVVDEEHDDSYKNSSEPYYNARDLSVYLASFGDIRVVLGSATPSVSSFFKFKH
                     FRLKGTFFDSKKEFIYDNFSTALSNLIIENIDKTLKMEKQAVIFLPTRANFKFLTCIN
                     CFNSIKCPFCSVSMSLHKKTGSLKCHYCGFSTAIPNSCPKCGSDMLEANKIGTSELVL
                     SLEKAFPNAQIAKFDKDEITTQNKLTTLLKNFNNKKIDILVGTQMLSKGHDYHNVDLA
                     VIMGLDEHLEYADFRAREKTLALTMQVAGRAARVGEGRVIIQTNKSEFFQEYLEDYDK
                     FLEDELESRNPLYPPFVRLLRIVIEDKNEQNALKFEKDILSNLKDISNLEIIGHGKAL
                     IEFIALKYRRSILLRSDSHIPLLKAAKIARNYGAHADIDPVNFN"
     gene            complement(6945..7742)
                     /locus_tag="RPW04_001448"
     CDS             complement(6945..7742)
                     /locus_tag="RPW04_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HDX6295537.1"
                     /translation="MEQKLENFINLLGKSSLNYYDFLQKANDISSLKEIINVKDFDDW
                     NILGLGLVKTESGKVTLKSKYTDFKDQVFCVVDIETSGGINSGQIIEIGALKLLDGVE
                     IGRFESFVYAPNVPENISELTGIYAADLAKAPSLANVLEKFKLFLGDSVFVAHNVKFD
                     YDFISISLERLGFGMLLNRRICTIDLARRTIISQKYGLGTLKELLGISNAHHRALNDA
                     IAAAEIFKECVKRVPWSIQSVEDLIIFSKTAKSLKLPNTLVKAKEFS"
     gene            complement(7755..8396)
                     /gene="rpe"
                     /locus_tag="RPW04_001449"
     CDS             complement(7755..8396)
                     /gene="rpe"
                     /locus_tag="RPW04_001449"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDX6295538.1"
                     /translation="MYVAPSILSADFGKLDDEVKAICEAGADLVHIDVMDGHFVPNLT
                     VGPLVVNAVAKSSSKPLDIHLMVENVPFFVDLFLPLKPKFLSFHIEEEKHPLRLIEYI
                     RKNGVSPAIVLNPHTPVSSLEYIINEVDMVLLMSVNPGFGGQKFIPSVLKKIKELRDL
                     IEKNGAKCMIEVDGGVNGLNVSELDEAGVDIVVAGNFVFSSNDYEQAIKALKL"
     gene            8525..9637
                     /gene="rseP"
                     /locus_tag="RPW04_001450"
     CDS             8525..9637
                     /gene="rseP"
                     /locus_tag="RPW04_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HDX6295539.1"
                     /translation="MKSIFLVLALLIASFWHWGVHFGVTILAISFLIFFHELGHFLVA
                     RFFGVKVNTFSIGFGEKIYTKRVGNTDYCLSAIPLGGYVQLKGQDDLDPKLKNYDSDS
                     YNVLSPIKRIAILFAGPFFNLLLAFFLYIALGFIGVDKLAPIIGTIQQGSAAKSAGML
                     KDDKIISINGVLIKQWDDIKKQVKLEPINIIIDRNGERLNINLTPKIGESMNIFREKI
                     QTPLIGISPSGEITKVYNPGLSSISYAFNETLESSKLIYKGLEKLITGVIPIKEMGGI
                     VAMADITTKASTISVSVLFLIVALISVNLGVLNLLPLPVLDGGHIVFNLYEMVFKRPV
                     NEKVFTALSYGSMAFLFALMAFTIFNDILRLAGVYE"
     gene            9634..10251
                     /locus_tag="RPW04_001451"
     CDS             9634..10251
                     /locus_tag="RPW04_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDX6295540.1"
                     /translation="MRLDEILSKIGSTKLIAVSKNVTENEVLELYNQGQIDFGENRVQ
                     ELKRKKEILKDLNLNWHFIGRLQANKINHLLALHPNLWQSCESFSMAEAVDKRLDYIL
                     PTLLQINSAHEESKQGVDPNAACEEFLRIKQSCKNLNLIGVMSIGAHSDDIKEIQKSF
                     ESTYKIYENLQEHGAKICSMGMSSDYELAIKCGSNMIRLGTILYK"
BASE COUNT         3522 a         1755 c         1807 g         3252 t
ORIGIN      
        1 caaatttaac acgccaaccg tgactaatat cgcggtactt aaatttaata aatatttaaa
       61 gctctctaag ttttgctatc tcgtctctta gagccgcagc tttttcaaat tccaaattct
      121 tagccgcttc aagcatctgt tttcttagtt cttttacgat ttttgctcgc tcactcgccg
      181 gcattttttc taattttttg gctttgttat ataaatttgg tagatcttct tcttttaagc
      241 tatcttctaa atttctacta gccgagcgcg gagttatacc gtactttttg ttataatcgc
      301 cctgatattt acgccttgct tcagttgtat ctatggcttc tttcatagaa tttgttattt
      361 tatttgcaaa taatataacc gttccattta cgtttctagc tgctcttccc atagtttgta
      421 tgaggcttgt acgacttctt aaaaagccct ctttgtcggc gtctaaaaca gctaccaaag
      481 agacttctgg tagatctagc ccctcacgga gtaaatttat accaacaagc atatcgaact
      541 ccccttttct aagacctctt ataagctcgt ttctttcgac tgcgtcgatg tctgagtgca
      601 tgtatttgac cttgatacca agttcttggt agtagcgcgt tagctcttca ctcatctttt
      661 tagttagagt cgttactagc actctttcgc ctcttgctat gactgctttt gccctatcaa
      721 acaaaacttc tacttgatta tcgctactta tgacttctat gcgtggatca agaagtccgg
      781 taggcctaag tatttgctca taaacatgac cttgtgagag atctatctca tactggtttg
      841 gagtggctga gacaaacaga tagtttgcct tttttgctat aaactcatca agtttcaaag
      901 gtctgttatc aagcgcagaa ggaagtctga aaccgtactc gactaaaacc tcttttctac
      961 ttctatcgcc tgcgtacatt ccgcgaaatt gtggcaaact cacgtggctt tcatctacta
     1021 taacaagata gtccttgccg ctcacttcaa agtaatcaaa caaagaatac ggcgtctctc
     1081 ctgctttttg ccctgttaga taacgcgcgt aattttctac gcctttggta cttccggtgc
     1141 ttgagagcat ctcaaggtca aattccactc tttgcttaag cctttgatac tcgactaatc
     1201 tattttcttt ttcataaaat gcaagcctat cttcaagttc aagctcgata tcttttatcg
     1261 cttgttttag tctattttcg ccgactataa actgacttgt tgcatatagt ataaatttgc
     1321 taacgtcttt agtgcgttta ttttctaata cgtcaaagtg atacatagcg tcaagctcgt
     1381 ctccaaaaaa ctcaagtctg atggcttcat cgttaaaata cgctggatag atatctacca
     1441 cgtcaccatt tactcgaaaa tctccacgat caaagtacgc atcgtttctt ttatatccca
     1501 tatctactag ttttaaaagt aactcttttt gatttaagct catacctaaa ctcagcagta
     1561 aaaccatacc tttatattca gcaggatttc ctaaaccgta gtttgcagat acggaagcca
     1621 cgactaccac atcatcaaac tcaagcaaat tcgcagtcgc actaagtctt aaacgctcca
     1681 attcttcatt tatagagcta tctttttcta taaaaagatc ttggcgcggt atataggctt
     1741 caggttggta gtaatcatag tagcttatga aatactcgac gtgattttta ggaaaaaagc
     1801 ctttgaattc gctataaagc tgcgcggcta agcttttgtt gtgtgtcatg atgagagtcg
     1861 gcatatttag gcgttttatc acatttgcca tcgtaaaagt tttaccgctt ccagttactc
     1921 ctaaaaggac gttaaattta tttccggatc ttatgctatc tactatgttt gttacggctt
     1981 tttcttgatc atcacttggc ttaaatttac tagatatctc aaatttatcc atatattctc
     2041 ttttttattt ttgcgaaatt atatcataaa taataaagat gtttatctat ataaatattt
     2101 gtataagttt aaaaatatac acgtaaatcc agcattaatc tattaaaatt ctcacatttt
     2161 tatgcagata tgacaaaaaa tatgctaaaa taaaataaat tatttctata aaaaaggaag
     2221 actatgtttg agaatgaaaa agttttaaat acactagcct caaaagtaac agagctgatg
     2281 ctaaaatatg aagaagtatg tgaaaataat gaagccctaa gaaacgaatt agtaagcgta
     2341 aaagcgcaaa acgaagctaa aacaaatcaa ataatgcgtc ttgaagagga gcttaaaaac
     2401 caaaatctag ccagtgacga tctacttaaa caggttgagg ctgttcttgg tagatgaaac
     2461 aaatcattct tacaatagcc tccaaagact atactatccg cttagaggat gaattcgcgg
     2521 aggctttcgg tgaagatata aaaaatttat tacaagataa atatcagttt ggagtaaaag
     2581 atctgctaac tgcttttata caaaaatgcc atgaagcata tatccaaaaa gagcaaatgg
     2641 ataagcttct tggagatctt gataaaactt taaagtaggt ataaatttaa agatatttac
     2701 aaataaggga ggggctggtt ttatgaagga aaaatccact atattattat ctcgtggctt
     2761 cacaatgatg gaaattttgt ttgttatcgt gattttaggg atattagcta gtatcgcagt
     2821 tcctagacta gtagccaaca aacaagacgc acaaatatct caactaaaat cacaaataac
     2881 caccataaga gaaggaataa gagattacgc aaaccagcaa agattagcaa aaaaaagtga
     2941 aaaaaaagat atttatccag agcagttaga agaaggtgaa ataaaaaata gaccgaattt
     3001 atttgaatac gtaatttcaa ctccgataaa atcaaacgga gttggttggc tgccaaataa
     3061 tgccatagca aaaactcaag gctggtcgga tcaaactgat tatggaacaa gatatctgta
     3121 ttctcttgga aacggtaaag tggatgaagt cataacaatg gattactgtt cacctactac
     3181 tactaaacgt acggatagat gtaacgatga taatatagga gactttatat gcgtaactgg
     3241 atgcaacaaa atagaagaaa agccacatcc ttaaatttaa aagaatataa aatatgaaaa
     3301 aagcatttag tttagtggag cttgtttttg taatggtcat tttagggata cttgctagct
     3361 ttataattcc tagtttttca gcaaaaaaac aagatgcaga tatagcaacc ataaaaatac
     3421 aaatcgctgc cataagagca ggaataagag attacacgac atctcagata atatcaggaa
     3481 aaactaaaca aactttagaa gttaaagaca taccgaaaaa atgggatgaa aacaaaaacg
     3541 atactatcta tccgttattt ttagaagatt ttggagatca taaagaatta ttttcaacag
     3601 tgctacctaa tcctataaaa ggaacaagca acaataccca aaacggttgg agcagacaaa
     3661 attcgtctaa taaactaaca tacgagggaa ggtattttat aagatttggg aaagaggcta
     3721 ttcgttttga ttactgttct atcgcgacac agactgaatc aagcaaacaa atatgtcctc
     3781 ctactaatga tactgacaag tacaagtata tgggtaaatt ttactgtagt gatagcgaca
     3841 aaaaaaatgc ggtttgttgg gtgaagaaca aatttaataa atataaaatt tacaaaaagg
     3901 agagactagc tttatgaata ttaaatttaa aaaatatatc aggggggggg ttagaggttt
     3961 taccgtgata gagatagttt ttgttataat tatcttaggt atgttggcta gtattttagt
     4021 tcctagacta gtagccaaca aaaacgacgc cgaaatagca aaagtaaaaa tgcagatatc
     4081 agccataaga agaggtatag agtactacaa agcagctcag atgggaaaag gatattatga
     4141 cgagttatac tgttttacaa aatgctctcc acaaggcaat agcgctcaag aaaatggagg
     4201 tagatctaaa tttgatatgg actttcttaa aactagaaat aaaggagtat atcctatgat
     4261 gctagatcaa tccagaaaca ataagggtag cgattatcgc ttattattta aaatggtttt
     4321 agctactcct ataaaaggtg ctgaaaacaa caacgagaaa ggctggagca gaataaataa
     4381 tagtggcgga gatccatatg atggaagata ctttttaaga gttgcgaata aatctattat
     4441 atttgattat tgttctccta ctttgcataa gtataacgac agtatgtgtt ctaaaggtgg
     4501 taagtttatt ccgtctttga atggtaaatt tttctgtatc ggtcaaccat catctgctac
     4561 tcgtgccgat agaattgcgg attgtgcttt gctaggtgaa gagtatatag atagtcaaac
     4621 actcgatacc atagaagatc cttcatactg gagcgatccg gcagaaacaa tataagaaga
     4681 tatttttaag agagtataaa tatgagaaaa gcatttacta tgatcgagat tgtgttcgtc
     4741 attatcattt taggaatact agctagtata gcaataccga tttttaatat aaaccgcgaa
     4801 gacgctcaaa tagcaaaagc acaagtagag ctagctacca taagatcggt aatagcccta
     4861 aaaagaagtg atagtttctt gatatctgat gagtcggtta tagatttaaa cgatgttcta
     4921 aaagaagccg aagtaagcac acaatacaat actagttcgg actacttgtt aagatggtcg
     4981 gtaaatgaag caaatttaaa actagatata aaaaataatg taacggtgac ttttagcatt
     5041 gataaaaacg gaaatttata ctgcgatcca aacgcaaatg atctttgtaa aaaaatagag
     5101 aaaaaacttt aaatttacga tgaattatta cgaaatagct cttagcggtt tgaatttaaa
     5161 accgcttact tatgaaagca aatttgatat cgaaattttt agcgcagtta gcgtaaaagt
     5221 gaaaaacaga atttgcaacg gatttgtgat aaaaagcgta gaaaaaccga aatttaaaac
     5281 gtctgctatt ttggaaattt taccgcaaaa acttacgcaa attcagatta aattagctga
     5341 atttatatcc agatattaca cttgcgaaat cggtgtttgc ttagggcttt ttgagcctta
     5401 ccatgaaatt tcaaatatga attatagttt tataaaatcc ccggaattaa gccaaaaaca
     5461 gcaaaatgct cttgagttta tcaagcaaaa tagcgtttca ttactttttg gagataccgg
     5521 aagcggaaaa agcgaagtat atatatctct tataaaagag gtattaaatg aaaataaaca
     5581 agccctactt ttaatgccag aaatctctct aacaccgcag atgcaaacgc gtttggagag
     5641 ttattttggt tcgtctgtag gtatctggca ctcaaaaata acacccaaaa ataaaaaaat
     5701 cttattagaa agattttttc gtggagagat caagctaata gcaggagcta ggtctgcact
     5761 atttttgccg ttttggaatt taggacttat agtagttgat gaggagcatg atgatagcta
     5821 taaaaatagt agtgagccgt actataatgc tagggatcta agcgtttatc tagcaagttt
     5881 tggagatata agagttgttt taggaagcgc tactccaagc gtgagtagtt tttttaaatt
     5941 taaacatttt agactaaaag gaacattttt tgactctaaa aaagagttta tttatgataa
     6001 tttctcaacc gctctaagca atctaataat agaaaatata gataaaactc taaaaatgga
     6061 aaaacaagcc gttattttct tgcctactag ggctaatttt aaattcttaa cttgcataaa
     6121 ttgttttaac agcataaaat gtcctttttg cagtgtttct atgagccttc ataaaaaaac
     6181 cggatctctt aagtgccact actgcggctt tagtaccgct ataccaaaca gttgccctaa
     6241 gtgcggtagc gatatgttag aagcaaacaa aataggtact agcgagcttg ttttgagtct
     6301 ggaaaaagcc tttccgaatg ctcaaatagc taaatttgat aaagatgaaa ttactacgca
     6361 aaacaagcta acaactctgc taaaaaactt taacaacaaa aagatagata tccttgtagg
     6421 cacgcaaatg ctaagcaaag gtcacgacta tcataacgtg gatttagctg tgatcatggg
     6481 gcttgatgag catcttgaat atgcggattt tagagctaga gaaaagactt tggctcttac
     6541 tatgcaagtt gcgggtcgcg ctgctagggt cggtgaagga agagttatta tccagacaaa
     6601 taaatctgag ttttttcaag agtacttaga ggattatgat aaatttttag aagatgagtt
     6661 ggaatctaga aatcccttat atccaccgtt tgtacgactt cttagaatag ttatagaaga
     6721 taaaaatgaa caaaatgctt tgaaatttga aaaagatata ttatcaaatt taaaagatat
     6781 ttcaaattta gaaattatag gtcacggaaa agcacttata gagtttattg cgttgaaata
     6841 tagaagatct attttattaa gatcagactc tcatattcct ctactaaaag ccgctaaaat
     6901 agctagaaat tacggagccc acgcggatat agatccggta aattttaact aaattctttt
     6961 gccttgacta aagtatttgg aagttttaaa ctctttgcgg ttttactaaa gatgatgaga
     7021 tcttcgacac tttgaatact ccaaggcact ctttttacac actctttaaa tatctcagca
     7081 gcagctatag cgtcatttaa agctctatgg tgagcattgc ttatacctaa aagctctttt
     7141 aacgtgccaa gtccgtattt ttgcgaaatt atcgttcggc gtgctaaatc aatcgtacaa
     7201 attcgtctat ttaaaagcat tccaaaacca agacgttcta aacttatgct tataaaatca
     7261 taatcaaatt taacgttatg tgcgacaaat acgctatctc ctaaaaacag cttgaatttt
     7321 tcaagcacat tcgcaagact aggtgcttta gctaaatcag cggcgtaaat tcctgttaat
     7381 tcgctgatat tttccggaac gtttggagca taaacaaaac tttcaaaacg ccctatttca
     7441 actccgtcca agagttttag cgctcctatt tctatgattt gaccactgtt tataccgccg
     7501 cttgtttcta tatctaccac gcaaaaaact tgatctttga aatccgtgta tttgcttttt
     7561 aaagtaactt ttccgctctc tgtctttact aaaccaagcc ctaaaatatt ccaatcatca
     7621 aaatctttga cattgattat ctcttttaag cttgatatat cgtttgcttt ttgcaagaaa
     7681 tcataataat taaggctgct tttaccgagt aaatttataa aattttctaa cttttgttcc
     7741 aaattgataa ctttttataa ttttaatgcc ttgatggctt gttcgtagtc atttgagcta
     7801 aatacaaaat ttcctgctac tactatatcc actcccgctt catcaagttc gctaacattt
     7861 agcccgttta cgccgccatc tacttctatc atacattttg caccgttttt ttctataaga
     7921 tctctaagct cttttatctt ttttagaaca gaaggtataa atttttgtcc accaaagccc
     7981 ggattcacac tcattaaaag taccatatcg acttcgttta ttatgtattc taagctagaa
     8041 acaggagtgt gtggatttag cactatagcc ggacttactc cgttctttct tatatattct
     8101 atgagtctta aaggatgttt ttcttcttct atatgaaagc taagaaattt aggttttagc
     8161 ggtaaaaaca gatccacgaa aaacggtaca ttttctacca ttaaatgaat atccaaaggc
     8221 tttgaagacg attttgctac tgcatttact actagcggtc ctacggttaa attcggcaca
     8281 aaatgaccgt ccatcacatc tatgtgaaca aggtccgctc cagcctcgca gatagccttt
     8341 acttcgtcat caagttttcc aaaatccgcg gataatatac taggtgctac atacatttat
     8401 taaacctttt taaatttcag aagttatttt acactttaat tacataaaat tcaataaaac
     8461 aatggatatt ttgagatagc ttctttagaa atttatgtta tactaaaaat aaaaaaggat
     8521 aaatttgaaa agtatttttt tggttttagc actcttgata gctagttttt ggcattgggg
     8581 cgtgcatttt ggcgtgacta ttttagctat atcgtttttg atattttttc atgaacttgg
     8641 tcatttttta gttgctagat tttttggcgt taaagtaaat acttttagta tcggatttgg
     8701 tgaaaaaatc tatacaaaaa gagttggaaa cacagactac tgcttaagtg ccattccgct
     8761 tggcggctat gtacagctta aaggacaaga cgatttagac ccaaagctaa aaaattatga
     8821 tagcgatagc tataacgttt taagccctat aaaacgcata gctatacttt ttgccggtcc
     8881 gttttttaat ctattactag catttttctt atatatcgca ttaggattca tcggagtaga
     8941 taaattagct cctatcatag gaactatcca acaaggctct gccgctaaga gtgcaggaat
     9001 gttaaaagac gacaaaataa taagcataaa cggcgtactt atcaagcagt gggacgacat
     9061 caaaaaacaa gttaaacttg agccgataaa tatcatcatc gatagaaatg gtgagcgttt
     9121 gaatataaac ttaacaccta aaatcggtga aagtatgaat atatttagag aaaaaattca
     9181 aactccacta ataggtataa gcccaagcgg cgagataaca aaagtatata atccgggttt
     9241 aagcagtatt tcttacgcat ttaacgaaac cttagaaagc tcaaaactca tctataaagg
     9301 gcttgaaaag ctgataaccg gagtaattcc tatcaaagag atgggcggca tagtcgctat
     9361 ggccgacatc acgacaaaag cttctactat aagcgtttcg gtgttatttt tgatagtagc
     9421 gttgatatct gtaaatttag gcgttttaaa cctgcttccg cttccggtac ttgatggcgg
     9481 acatatagtc tttaaccttt atgagatggt gtttaaaaga ccggtaaatg aaaaggtttt
     9541 tacggcatta agttacggtt ctatggcgtt tttattcgca ttgatggcat ttactatatt
     9601 taacgatata ttaaggcttg caggagttta tgaatgagat tagatgaaat tttaagcaaa
     9661 ataggaagca caaaactcat cgctgtttca aaaaatgtca ccgaaaacga agttttggag
     9721 ctatataatc aaggtcaaat agactttgga gaaaacagag ttcaagagct aaaacgtaaa
     9781 aaagagattt taaaagatct aaatttaaac tggcatttta tcggtcgctt acaagcaaat
     9841 aaaatcaatc atcttctagc tttgcatcct aatttatggc aaagctgcga gagtttttct
     9901 atggctgaag ctgtggataa aaggcttgat tatattttac cgaccctact tcagataaac
     9961 tcggctcacg aagaaagcaa acaaggcgta gatccaaatg cggcttgtga agagtttttg
    10021 cgtatcaaac agagctgcaa aaatctaaat ttaataggag tgatgagcat cggtgctcat
    10081 agcgatgaca taaaagagat acaaaaaagc tttgagagca cgtataaaat ttatgagaat
    10141 ttgcaagaac atggagcaaa gatctgttct atgggaatga gcagtgatta tgaactagct
    10201 ataaaatgcg gctcaaatat gattcgtctc ggaacgattt tatataaatg aaatttataa
    10261 ataaaagaga ttacggctat aaaaccgtac cttagtatat aaatcagact tagaagcact
    10321 tttggtacaa gcagag
//
LOCUS       DAPPKW010000065        10072 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.065, whole genome shotgun sequence.
ACCESSION   DAPPKW010000065 DAPPKW010000000
VERSION     DAPPKW010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 10072)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10072)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10072
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.065"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            158..1804
                     /locus_tag="RPW04_001452"
     CDS             158..1804
                     /locus_tag="RPW04_001452"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012245.1,HMM:NF024140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDX6295541.1"
                     /translation="MNYFENLKVSTKLYLSFAIVIFLMIIISVIGINRVDFIDKSLST
                     MTDVNSLKQRYGINFRGSVHDRAIAIRDVILTNENDELKTFLNDIARLEKFYNESDAP
                     LKQFIKQIGSVTKEELDMIKDIDYINETTVPLYKKAILLKQEGKYDEAHELLMHEIAG
                     KFTQWLAAINKFIDYQENANKELTDVIKAEASGFKYIMIVLTLIAIVIASTIGFLIQS
                     GIKRQIGGEPKDVNNIISEVARGNLSIKSDTTYEASILAQTIKMQNKLKEIVESINQA
                     SYQVDDKTKILIETFKNVNTSVTKQNDIATNSTKIVQLAKQKTGDVANMAKDTQLNSN
                     KATELCQNGKNSSNEVAQKMNEINATVAEQVNQIKLLSSHAKDISGAAELISEITDQT
                     NLLALNAAIEAARAGEAGRGFAVVADEIRKLAERTGTATDEITNTIKIIQEQTEVAVS
                     IIEQGVPRVEDGYKLSSDVAGLLNEIYNQAVDSSHKASEVVSVAENQVESMVLLATNI
                     ENISKVSHDTQDNMNQNQEKLKELEAISRKLNELIGFFKI"
     gene            1870..2181
                     /locus_tag="RPW04_001453"
     CDS             1870..2181
                     /locus_tag="RPW04_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDX6295542.1"
                     /translation="MFKDFDFSKMGEMLSEAQKKAAEFENEIAAKEFVAKSGGGLISV
                     KANGRSQILDISIDDTLLEDKESLQILLISAINDAIKLSEDEKKRAASAMFGGLGGFG
                     V"
     gene            2183..3259
                     /locus_tag="RPW04_001454"
     CDS             2183..3259
                     /locus_tag="RPW04_001454"
                     /inference="COORDINATES: protein motif:HMM:NF024578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HDX6295543.1"
                     /translation="MKKLCSFLLLFLAIFAYSAPKPTPEDVDAIYQKNKDSQFNYKGN
                     IAVALNADLAAVIYDKNNKLDSKDYIKFDPYLGLYLIKSQNTLRASFMIDELDSKEDM
                     WVMILDKNSTEMGHIKSFAKDIGELDELSYNASKAGLLVCDCGTMVGIGVGGNKFIGN
                     RYIKHFMKYSDVYYGDIGVTFSDDNGTITVKSANPFGAGKELLTGDTIVSVNSKVPNN
                     LREINEMILFAPKDAVLKFDINRDGKNQSYSIKMSNLPNKIMNSSDDNKTSSLKAKKP
                     VKKRTFLSQYGITLNPNLTIKSVARNSKAYKAGFRNGDKIMQIDKKQLNSSADIEKIM
                     SAKNGAFYYLVSRDDFQFFVKVYR"
     gene            3256..4089
                     /locus_tag="RPW04_001455"
     CDS             3256..4089
                     /locus_tag="RPW04_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HDX6295544.1"
                     /translation="MSFEEFFELNLPKVDSFHPHFNDSLSWVLKAGGKHFRAKLLLGV
                     VDALKPDLKSASYPVAAAVEMLHTYSLIHDDLPCMDNADLRRGVATLHVKYDEVSAVL
                     AGDALNTHAFYMLSSANLPAEAVVKCVQTLAENGGIYGMVIGQAIDCYFENKHLNLDE
                     LKFLHLHKTGALIAASMKMGAIISAQSDKQCEKIYNIGLKLGLAFQIHDDIIDATSDE
                     MKAGKTVNNDLFKNSFTNLMGVNGAIDARDEIENEILYELDGSPLKTLILNLINKYLK
                     G"
     gene            4095..5996
                     /gene="tkt"
                     /locus_tag="RPW04_001456"
     CDS             4095..5996
                     /gene="tkt"
                     /locus_tag="RPW04_001456"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011992840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDX6295545.1"
                     /translation="MFKKQADTIRFLCADMVQKANSGHPGAPMGLADIMSVLVNHIKH
                     NPKNPTWLNRDRLVFSGGHASSLVYSYLYLCGYDVSLDDLKKFRQLHSKTPGHPEIET
                     PGVEIATGPLGQGVANAVGFAMAAKSASNLLGNEIINHKVYCLCGDGDLEEGISYEAC
                     ALAGKHSLDNLVIIYDSNNITIEGDTSIAWCEDVKVRFEAAGFEVARIDGHNYDEIEF
                     ALCEADTKEKPYLIIASTKIAKGAGDLEGSHHAHGAPLGEEIIKQAKIEAGFDPQKQF
                     FVDDDVLFKFRSAVELGDLANAQWDKLVSELPNEKKELLNTLLNPDFSKIDFPNLKGE
                     KLATRDSNGKILNALAAALPGFIGGSADLAPSNKTELKGFGDFPRGKNMHFGIREHAM
                     GAICNAYARYGLFLPFSATFFIFSDYLKASARIAALMGIKHFFVWTHDSIGVGEDGPT
                     HEPIEQLSTFRAMPNFYSFRPADGNENVECWKTALNLNAPSAFVCSRQALPPLDEPKF
                     GDVKNGAYLLKQASNPKITLVASGSEVGLCLEAASILDSEGIATNVVSAPCFDLLLEQ
                     DADYVNTIFNPSTKVLAVEAASALEWYKYADDVLGMRTFGASAPANELFKYFGFTATN
                     VANRAKNLL"
     gene            6145..7593
                     /gene="aldA"
                     /locus_tag="RPW04_001457"
     CDS             6145..7593
                     /gene="aldA"
                     /locus_tag="RPW04_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HDX6295546.1"
                     /translation="MRTYEMYIDGAFVPNRSSKSIEVLNPATKKVISTIPDADISQVE
                     EAISSSKKAQKSWEALAAIERANYLRKIANEIRENSEMLAQTITEEQGKIISLARVEV
                     NFTADYLDYMAEWARRYEGEIIQSDRTNENIFIFKQAIGVTSGILPWNFPFFLIARKL
                     APALVTGNTIVIKASVETPNNAFEFAKLAHKAGLPKGVFNLVSGRGSTVGNLLASHKD
                     IGLVSFTGSVETGAKIMEAASKNIIKVNLELGGKAPAIVCRDADIDAAVNYIKNSRII
                     NTGQVCNCAERVYVQKDIIKTFTDKMVEAMKHVKYGIPTDEKVDMGPLVSEAGLNSVN
                     AMVERAKNSGAKVLTGGRISSNQDGYYYEPTVITDIDQKSELIQSEIFGPVLPIVAFD
                     SIDNAIEMANDSDYGLTSSIYTQNIDIAMRACREIKFGETYINRENFEAMQGFHAGFR
                     KSGIGGADGKHGLEEYLATHVVYLQYNKDANF"
     gene            complement(7704..7904)
                     /gene="kcuS"
                     /locus_tag="RPW04_001458"
     CDS             complement(7704..7904)
                     /gene="kcuS"
                     /locus_tag="RPW04_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_148936497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KCU-star family selenoprotein"
                     /protein_id="HDX6295547.1"
                     /translation="MALLAKLKKIWQAYEKLDEALYPLIGLQRYEKYLEHFNKTHPGK
                     EPLSRAEFFKEAQDAKAKNVKC"
     gene            complement(7888..9966)
                     /locus_tag="RPW04_001459"
     CDS             complement(7888..9966)
                     /locus_tag="RPW04_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HDX6295548.1"
                     /translation="MKLYQKLLWLLVSVIGAWTFGVLALNRGESISAVWLVVASVCIY
                     MIGYTFYGRFIAMKVLMLDDNRATPAYTLNDGRDYTPTNKYVLFGHHFAAIAGAGPLV
                     GPVVAAQMGYLPSMIWLLVGVVLAGAVHDFVVLFLSVRRNGKSLGEMIKEELGAFTGG
                     VAMVGIFFIMLIIVAILAMVVVKALAESPWGLFTIAMTIPIAIFMGIYMRFLRPGKVI
                     EASIIGFIFLMFALLGGHYVAADPFWKDIFSLKGTTLAWLTIAYGFIAAILPVWFLLA
                     PRDYLSTFLKIGVIVGMAIAILLVGPEIKMPAVTSFTDGTGPVFAGPLFPFLFITIAC
                     GAISGFHALISSGTTPKLVEKESQTLFIGYGSMLMESLVGVMALVSATILTPGLYFSI
                     NIGGLGTDVVAAAAKITELGFSVTPEEILALAKNVGEETMMSRTGGAPTFAVGLTLLF
                     HELVGGVEAMPFWYHFAILFEALFILTAVDAGTRTGRFMVQDILGNVHKPIGDTKNWF
                     WGIIATIICVTGWGYLLYSGVTDPMGGIFTLWPLFGAANQMLAGIALMLGTVVLFKMG
                     KAKYSWVTIAPLVWVLITTMYAAYQKLLPANGERVHDAVSHIATAQNWAKKLETLTDP
                     AAIAKAEAVIRNNIIDAVLCGFFMIVVVIVAIQTFRICFRIYKDGNDKAYPLGESEYK
                     KASDYNGITC"
BASE COUNT         3513 a         1621 c         1960 g         2978 t
ORIGIN      
        1 cattatttgt acaaaaataa taaattatta gattatattt attagtttat ttagagataa
       61 aaaatagaat tataataagt atcaattatg tgaattaaca tagaattaac aaaaaatgtt
      121 ataattcgcc aaatttagtt acgaaaagga tttgtttatg aattattttg agaatttaaa
      181 agtttcaaca aaactttatc taagttttgc tattgtcatt tttcttatga taataattag
      241 cgtgataggc ataaataggg ttgattttat cgataaatct ctatctacaa tgacagatgt
      301 taattcactc aagcaaagat acggtataaa ctttagagga tcggttcatg atagggctat
      361 agccataaga gatgttatat tgacaaatga aaatgatgaa ttaaaaacat ttttaaacga
      421 tatagctagg cttgaaaaat tctataatga atctgacgct cctctaaaac agtttataaa
      481 gcagatcggc tcagtaacga aagaagagct agatatgata aaggatattg attatatcaa
      541 tgaaactacc gttcctttat acaaaaaagc cattttgcta aaacaagaag gaaaatacga
      601 tgaagctcat gagcttctta tgcatgaaat agctggcaaa tttacgcaat ggttggctgc
      661 tattaacaaa tttatagatt atcaagaaaa cgcaaacaaa gagcttaccg atgttataaa
      721 agccgaagcc tccggtttta aatacataat gatcgttttg actttgatag ctatcgttat
      781 agcttctact ataggatttt tgatacaaag tggtataaaa aggcagatcg gcggtgaacc
      841 aaaagatgtt aataacatta tttcggaagt cgctcgcgga aatttaagta taaaatcaga
      901 tacgacttat gaggctagta ttttagctca aactatcaaa atgcaaaata aattaaaaga
      961 gatagtcgaa tccataaatc aagcttcata tcaagtcgat gataaaacta agattttgat
     1021 tgagacgttt aagaatgtta atacatcagt tactaaacaa aatgatatag caacaaattc
     1081 tacaaaaata gttcaattag caaaacaaaa aaccggcgat gtagcaaata tggcaaaaga
     1141 cactcagtta aattcaaata aagccacaga gttatgccaa aatggaaaaa attcttcaaa
     1201 tgaagttgct caaaagatga atgagataaa cgcaactgtt gctgaacaag taaatcaaat
     1261 aaaactttta agcagtcatg ctaaagatat cagtggcgca gctgaactta tctcagaaat
     1321 cacagatcaa acaaatcttt tagctctaaa cgcggctatc gaagcagcta gagcaggaga
     1381 agcaggaaga ggatttgcgg ttgttgcaga cgagatcaga aagcttgccg aaagaacagg
     1441 cacggccaca gatgagatta caaatacaat taaaattatt caagaacaaa ccgaagtggc
     1501 agtaagtatt atcgaacaag gagttccaag agtcgaagac ggatacaaac tatcaagcga
     1561 cgtagcaggg cttttaaatg aaatttataa tcaagcagtt gattcgtctc ataaagctag
     1621 tgaagttgta agtgtggctg aaaatcaagt agaatcaatg gttttattgg ctacaaatat
     1681 agaaaatata tcaaaagtct cacatgatac tcaagacaat atgaaccaaa atcaagaaaa
     1741 acttaaagag ttggaagcga tatctagaaa gttgaatgaa ttaataggat ttttcaagat
     1801 ttgataattc ggtaaaaagc taaatttaat acccgttttg ttataattaa tcaaaactaa
     1861 aggtagttta tgtttaaaga ttttgatttt tctaaaatgg gtgaaatgct ctcagaggct
     1921 caaaaaaagg ctgcagagtt tgaaaatgag attgccgcta aagagtttgt ggctaaaagc
     1981 ggcggcggtc ttataagtgt aaaagctaac ggtcgatccc aaattttaga cataagtata
     2041 gatgatacgc ttttagaaga caaagagagt cttcaaatac tgcttatatc tgctataaat
     2101 gatgctatta agctatctga agacgagaaa aaacgtgccg cttctgctat gtttggcggt
     2161 cttggcggat ttggagtgta gaatgaaaaa attatgctca tttttactgc tatttttagc
     2221 tatttttgct tacagcgcac ctaagccgac tcctgaagac gtagatgcga tatatcaaaa
     2281 aaacaaagat tctcagttta actataaagg caatatcgca gttgcattaa atgcggatct
     2341 tgctgctgtt atttatgata aaaacaataa attagatagt aaggattata ttaaatttga
     2401 tccgtactta gggctttatc ttatcaaatc ccaaaatact ttaagagctt catttatgat
     2461 agatgagcta gatagcaaag aagatatgtg ggttatgatt ttagataaaa actctactga
     2521 aatggggcat ataaagagtt ttgcaaaaga tataggcgaa ctcgacgagc ttagttataa
     2581 cgctagcaaa gccggacttt tagtttgcga ttgcggtact atggtcggta taggcgttgg
     2641 aggaaataaa tttataggaa atagatacat aaaacatttt atgaaatata gcgatgtata
     2701 ttacggcgat ataggcgtga cttttagtga tgataacgga actataacag taaaaagcgc
     2761 aaatcctttt ggagcaggaa aagagctttt aacaggagat actatagtat ctgtaaattc
     2821 aaaagtacca aataatctaa gagaaataaa cgagatgatt ttgtttgctc caaaagatgc
     2881 ggtgttgaaa tttgatatta acagagatgg taaaaaccag tcttatagca tcaagatgtc
     2941 aaatttgcca aataaaatta tgaattcttc cgatgataat aaaacatcct cgctcaaagc
     3001 caaaaaacct gttaaaaagc gtactttttt aagtcagtac ggtataactt taaatccgaa
     3061 tttaactata aaaagtgtag ctcgaaactc aaaagcgtat aaagccggtt ttaggaacgg
     3121 agataaaata atgcagattg ataaaaaaca actgaattcc tcagccgata tagaaaaaat
     3181 aatgtctgca aaaaatggtg ctttttatta tctagtttcg cgtgatgatt ttcagttttt
     3241 tgtgaaagtt tatagatgag ctttgaagag ttttttgagt taaatttacc aaaggtcgat
     3301 agtttccatc ctcattttaa tgattctctt tcttgggttt tgaaagcagg cggaaagcat
     3361 tttagagcta aacttctttt aggagtcgta gatgctttga aacctgatct taagagcgca
     3421 tcttacccag tcgcagcagc agtagaaatg cttcatacat attctcttat acatgatgat
     3481 ctcccttgta tggataatgc ggatcttaga agaggcgttg caactttaca tgttaaatac
     3541 gatgaagtaa gtgcggtatt ggctggagat gctttgaata cccatgcttt ttatatgctt
     3601 agttcggcta atcttcctgc cgaagcggta gtaaaatgcg tccaaacatt agccgaaaat
     3661 ggcggtatat acggtatggt aataggtcaa gccatagact gctactttga aaataagcat
     3721 ttaaatttag atgaacttaa gtttttacat ctgcataaaa ccggcgcttt gatcgcagct
     3781 agcatgaaaa tgggtgccat aatatcagct cagagcgaca aacaatgtga aaaaatttat
     3841 aatataggat taaagctcgg acttgcgttt caaattcacg atgatataat agacgctact
     3901 agcgatgaga tgaaagctgg taaaacagta aataatgatt tgtttaaaaa ttcttttaca
     3961 aatttaatgg gtgttaacgg cgctatagat gctagagatg agatagaaaa tgagatttta
     4021 tacgagcttg atggatcgcc tcttaaaact ctgattttaa atttaataaa taaatatcta
     4081 aaaggatagt taaaatgttt aagaaacaag ccgatacaat aaggttttta tgtgccgata
     4141 tggttcaaaa agcaaactcc ggacatccgg gtgctcctat gggtttggct gatataatga
     4201 gtgttttggt aaatcatata aaacataatc ctaaaaatcc aacatggtta aatagagata
     4261 gattggtatt tagcggtggt catgcaagta gcttggttta tagttattta tatctttgtg
     4321 gttatgacgt tagtttggat gatttgaaaa aatttagaca acttcactct aaaactcccg
     4381 gacatcccga gatagaaacc ccgggagtag agatagcaac tggaccatta ggacaaggag
     4441 tggcaaatgc tgtaggtttt gccatggcgg caaaaagcgc ttcaaattta cttggaaatg
     4501 agattataaa tcataaagta tattgtctgt gcggcgatgg agatctagaa gaaggtatca
     4561 gttatgaagc ttgtgctttg gctggaaaac actctttaga taatttagtg attatatatg
     4621 atagcaataa tatcacgata gagggcgata ctagtatagc gtggtgtgaa gatgtaaaag
     4681 tacgttttga agcggctgga tttgaagttg cgcggataga tggacataat tatgatgaga
     4741 ttgaatttgc actttgcgaa gcagatacga aagaaaaacc ttatcttatt atcgcaagta
     4801 caaagattgc taaaggcgca ggagatttgg aaggtagtca ccatgctcac ggcgctccgc
     4861 ttggtgaaga aatcataaaa caagctaaaa tagaagccgg atttgatccg caaaaacagt
     4921 tttttgtaga tgatgacgtg ctttttaaat ttagaagtgc cgtggagtta ggagaccttg
     4981 caaatgcgca gtgggacaag ctagttagcg aacttccaaa tgagaaaaaa gagcttttaa
     5041 acactctttt aaatcccgat ttttctaaaa ttgattttcc aaatttaaaa ggagagaaac
     5101 tagctactag agatagtaac ggcaagattt taaatgcttt agctgccgcg cttcccggat
     5161 ttatcggcgg tagcgcagat cttgcaccta gtaataaaac agaacttaaa ggttttggag
     5221 actttccaag aggtaaaaat atgcactttg gcataagaga acacgctatg ggagctatat
     5281 gtaatgctta tgcgcgttat ggactatttt taccgttttc ggcaacgttt tttatattta
     5341 gcgattactt aaaagcaagt gctagaatag ctgctttaat gggtataaag catttttttg
     5401 tctggacgca tgatagcata ggagtaggcg aagatggacc tacgcatgag ccgatcgagc
     5461 agctttctac atttagagca atgccgaatt tttactcatt ccgtccagct gatggtaatg
     5521 aaaatgtgga atgttggaaa actgcattaa atttaaatgc tccatctgca tttgtatgtt
     5581 ctcgccaagc tctacctcct ttagatgagc ctaaattcgg agatgtaaaa aacggtgctt
     5641 atttattgaa acaagcctca aatccgaaaa taactctagt tgctagtgga agtgaagtcg
     5701 gactttgttt ggaagctgca agtattttag atagtgaggg catagcaaca aacgttgtat
     5761 ctgctccttg ttttgatctg cttttggagc aagatgcgga ttatgtaaat acgattttta
     5821 atccatctac aaaagtttta gcagtagaag cagcaagcgc tcttgaatgg tataaatacg
     5881 ctgatgatgt tttaggaatg cgtacttttg gtgctagcgc ccctgctaat gaacttttta
     5941 aatattttgg ctttaccgct acaaacgtag ccaatagagc taaaaatcta ctttaaattt
     6001 aaaaagagga ttcactcctc ttttgttact tttttactca aatttatatt aattatcaaa
     6061 aatataagcc ttttatccgg taaaaaaata aaccgtttgc taaaagtagt gtatgataat
     6121 ataaatttat ataaaggaaa tatcatgcgt acttacgaaa tgtatataga cggtgctttt
     6181 gttccaaata gaagctctaa gagcattgaa gttctaaatc cagccacaaa aaaggttatt
     6241 tcgactattc cagatgccga tatatcgcaa gtagaagagg cgattagcag tagcaaaaaa
     6301 gctcaaaaat cttgggaggc acttgcagcg atcgaacgtg caaattattt aagaaaaata
     6361 gcaaatgaga taagagagaa ttcagaaatg ttagctcaga ctattaccga agagcaaggt
     6421 aaaatcatat ctttagctag agttgaggta aattttacag ctgactatct tgattatatg
     6481 gctgaatggg ctagaagata tgaaggtgag attatacaaa gcgatcgcac aaatgaaaat
     6541 atatttatat ttaaacaagc aatcggagtt acaagcggta ttttaccttg gaatttccca
     6601 tttttcttaa tcgctagaaa gttggctcct gctcttgtta cggggaatac tattgttatc
     6661 aaagccagtg ttgaaacgcc aaataacgcg tttgaatttg ccaaacttgc ccataaagca
     6721 ggtcttccaa aaggagtgtt taatctagta agtggacgtg gaagtacggt tggaaattta
     6781 ctagcaagtc acaaagatat aggtttagta agttttactg gtagcgtgga aacaggagct
     6841 aagattatgg aagctgctag taaaaatatc ataaaagtaa atttagaact aggcggtaaa
     6901 gctcctgcta ttgtttgtag agatgccgat atagacgcgg ccgtaaatta tataaaaaac
     6961 tcgcgtatta tcaatacagg acaagtttgt aactgcgctg agagagttta tgtgcaaaaa
     7021 gatattataa aaacttttac agacaaaatg gtagaagcaa tgaaacatgt aaaatatggc
     7081 attccgactg atgaaaaagt agatatgggt ccccttgtaa gcgaagccgg attaaactca
     7141 gtaaatgcta tggtagaacg tgcgaaaaat agcggtgcta aggtattaac cggaggacgc
     7201 atatctagca atcaagacgg ttactattat gaacctactg ttattaccga tatagatcaa
     7261 aaaagtgagc ttatccaaag tgagatattt ggtccggtgc ttcctatagt ggcttttgat
     7321 agtatagata atgctataga gatggcaaac gatagtgatt atgggctaac ttcaagtatt
     7381 tatacacaaa atatagatat agcgatgaga gcatgccgtg agattaaatt tggagaaaca
     7441 tatatcaatc gggaaaattt tgaagctatg caaggatttc acgccggttt tagaaaaagt
     7501 ggtataggtg gagccgatgg aaagcatggg cttgaagagt atctagctac tcacgttgta
     7561 tatttgcaat acaataaaga tgctaatttt taatttataa attttaaatt tatataatta
     7621 aatttaaata attatagccg gaaaatatat ccggctaaac taaacttatt ttgtactggc
     7681 ttaactaaac cattttaagt ttatcagcat ttaacatttt tggctttagc gtcttgagct
     7741 tctttaaaaa actcagccct agaaagaggt tctttcccgg ggtgagtttt gttaaaatgt
     7801 tccagatatt tttcatatct ttgaagcccg atcaaaggat acaaggcttc atctaatttc
     7861 tcataagctt gccaaatttt tttaagttta gcaagtaatg ccattgtaat cgctcgcttt
     7921 tttgtattcg ctttcaccaa gtggataagc tttatcatta ccatctttgt aaattctaaa
     7981 gcaaattcta aatgtttgta tagctacaat aacgacaact atcataaaaa atccacaaag
     8041 cacagcgtca attatattat ttctaataac ggcttcagct ttagctatgg ctgctggatc
     8101 ggttagagtt tctagttttt tcgcccagtt ttgagcagta gctatgtgac ttacggcgtc
     8161 atgaactctc tctccatttg ccggaagaag tttttgatat gctgcataca ttgtagttat
     8221 aagcacccaa acaagaggag ctatagtaac ccatgagtat tttgcttttc ccattttaaa
     8281 taatactacg gttccaagca taagagcgat gccggctagc atttgatttg ccgcgccaaa
     8341 tagaggccaa agtgtgaata tacctcccat agggtcagta acaccgctat atagtaggta
     8401 tccccagcca gtaacgcata ttatagtagc tataataccc caaaaccagt tttttgtatc
     8461 acctattggt ttatgaacgt tacctagtat atcttgtacc ataaatcgtc ctgttctagt
     8521 accggcatca accgcggtta atataaatag tgcctcaaat aatatcgcaa agtgatacca
     8581 aaatggcata gcttctactc cgcctacaag ctcatggaaa agcaaagtaa gacctactgc
     8641 aaatgtaggg gcaccacctg ttctgctcat catagtctct tcacctacat tttttgctag
     8701 tgctaagatc tcttcagggg ttacgctaaa gccaagctct gttatcttag cagctgcggc
     8761 taccacgtca gtgcctaggc ctcctatatt tatagagaag taaagcccag gagttagtat
     8821 agtagctgaa actagtgcca taactccaac aaggctttcc ataagcatag aaccataacc
     8881 tataaatagt gtttgactct ctttttctac caatttcgga gttgtaccgc ttgatataag
     8941 agcatgaaat ccagatatag cgccacatgc tatagtaata aataagaacg ggaaaagagg
     9001 gccggcaaat acaggaccag taccgtctgt aaatgaagta actgcaggca ttttaatttc
     9061 aggtccgaca agcaatatag ctatagccat accgactatt acgcctattt ttaaaaatgt
     9121 acttaagtag tctcttggag ctagtaaaaa ccaaacaggt aaaatagcgg ctataaatcc
     9181 ataagctata gtaagccatg ctaatgttgt gccttttagt gaaaatatat ccttccaaaa
     9241 cggatcggca gcaacgtagt gacctcctaa tagagcaaac ataagaaata taaatccgat
     9301 tatagaagct tctataactt taccaggacg taaaaatctc atataaattc ccataaaaat
     9361 agcaatagga atcgtcatag ctatggtaaa taatccccat ggagattcag ctaaggcttt
     9421 tacaacgacc atagcaagta tagctacgat aattagcata ataaagaaaa tgcccaccat
     9481 agctacaccg ccggtgaatg ctccgagctc ctcttttatc atctctccta agctctttcc
     9541 gtttctgcga acagataaga aaagaacaac gaagtcatga acggctccag ctagcacgac
     9601 accgactaaa agccatatca tgcttggtaa ataacccatt tgagcagcaa ctaccggacc
     9661 tacaagagga ccagcacccg caatggctgc aaagtggtga ccgaaaagaa cgtatttatt
     9721 tgtaggagta tagtctcttc cgtcatttag ggtgtaggca ggagtagcgc ggttgtcatc
     9781 taacattagg actttcatgg cgataaaacg accatagaaa gtataaccta tcatatagat
     9841 acaaacgcta gctacaacta gccaaacagc gcttatgctc tctccgcggt ttagtgctaa
     9901 aacaccaaat gtccaagcac ctatcacaga tacaagcagc cataacagtt tttgatatag
     9961 cttcaaaatt tatcctttca gaaaatgtgg taagttgttt attttatcat atttaactta
    10021 aaattatttt taaatttata attaattaaa atattattga aaatttccta at
//
LOCUS       DAPPKW010000066         9933 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.066, whole genome shotgun sequence.
ACCESSION   DAPPKW010000066 DAPPKW010000000
VERSION     DAPPKW010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9933)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9933)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9933
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.066"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            124..411
                     /gene="gatC"
                     /locus_tag="RPW04_001460"
     CDS             124..411
                     /gene="gatC"
                     /locus_tag="RPW04_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HDX6295549.1"
                     /translation="MQIDDKMLEKLEKLSALKIPDQNREEFKSQLGKIVDFVDILNEL
                     DLDGIEATVSTIGGGTPFREDISKEGSVIDGILTHAPKKQNRYFEVPKIIE"
     gene            415..1476
                     /locus_tag="RPW04_001461"
     CDS             415..1476
                     /locus_tag="RPW04_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HDX6295550.1"
                     /translation="MNIETLLKTVMHNKASDLHLVGRSEPQIRIDGSLRPLEGKVLDG
                     SDIENLCYTILTDAQKSELEENKDLDFALELPGIGRFRGNCYYTMNGSLAAAFRMIPL
                     NIPSLDDLNAPAIFKELVKKEKGLVLVTGGTGAGKSTTLAALLNEINITERKHIITIE
                     DPIEFVHQNKNSLFSHRNVGTDTKSFARALKYALREDPDIILVGDLRDPETISIAIAA
                     AETGHLVFGTLHTNSAVQTINRIVDSFNETEQAQVRNMLSVSLNAIISQTLVPKADNG
                     RFAVHEVLINNHAISNLIRENKSHQIYSQIQLNQQNTGMQTQTQAMEKAVQMGIITKE
                     NAIRYSTNQQELAGKLGAI"
     gene            1476..2051
                     /locus_tag="RPW04_001462"
     CDS             1476..2051
                     /locus_tag="RPW04_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HDX6295551.1"
                     /translation="MNFVTWFDIIVIALVVILGIKGIINGLVKEVFGLIGLIGGVIIA
                     SRNAQSVGDLISSNIYQLNDSSSFFFGFLVTLILFWFVCLIAGNIFSKMLSLSGLGFL
                     DRILGFFIGSAKIFLVFAIFCAIISNISVLSQKIEPYFENSKVYPVLLASGKFIMNID
                     LNRTKQDAIDKFDNEPMSVDSNETNSTKEDR"
     gene            2055..2519
                     /locus_tag="RPW04_001463"
     CDS             2055..2519
                     /locus_tag="RPW04_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HDX6295552.1"
                     /translation="MTNVDNIEYDTLLDRFKKVLRDNGLKYTKQREILLKTLYNNSDH
                     FTPEQLYLYIKDSHPDLNLGIATVYRSLNLLEESGMVTSISFGAQGKKFELATKPHHD
                     HMICRTCGNIIEFEDPIIEKRQSIISKEHGFKLTGHMMQLYGVCQECNKKKN"
     gene            2530..4044
                     /gene="lysS"
                     /locus_tag="RPW04_001464"
     CDS             2530..4044
                     /gene="lysS"
                     /locus_tag="RPW04_001464"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDX6295553.1"
                     /translation="MIFENELELTRLAKADELRSLGVNPYPHFLKRDMSISEFKTKFA
                     YIKDLNGDEKKADEEVTISGRLKLKRVAGKSTFANMEDENDNIQIYYSLGSIGEEDYT
                     KFKKNLEVGDIVLVTGYAFVTKTGEFSIHASKIVLASKAISPLPEKFHGLTDIEMRYR
                     QRYLDMIMDKDVRADFVKRSLIISTIRRFFEDKGFLEVETPMMHPIAGGANAKPFITH
                     HNALDVDRYLKIAPELYLKRLIVGGMEAVFEMNRCFRNEGMDLTHNPEFTSIEFYWAW
                     HNYFEAMDLTEELFAVLLDRLNLPQVIEFDGKSIDFSKPFARVKYIDAIVEIGGISRD
                     IVTNKDKILSKLKADKFEANDKLDLGHLQAELFDNYVEDKLINPTFIVDFPISISPLS
                     RRSDADKNVAERFELFIAGRELANAFNELNDPVDQYERFKSQIEAKNAGDDEAHEMDE
                     DYCQALGYGMSPTVGWGLGVDRLVMLLLNKKSIRDVILFPAMKPLKTENKENKK"
     gene            4041..5285
                     /locus_tag="RPW04_001465"
     CDS             4041..5285
                     /locus_tag="RPW04_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDX6295554.1"
                     /translation="MSLESFDKDIYSLVNKELERQCDHLEMIASENFTYPDVMEVMGS
                     VLTNKYAEGYPSKRYYGGCEFVDEIEQIAIDRCKKLFGCEFANVQPNSGSQANQGVYG
                     AFLKPGDKILGMDLSHGGHLTHGSKVSSSGKNYESFFYGVELDGRINYNKVEEIANIT
                     KPKMIVCGASAYAREIDFKKFREIADSVGAYLFADVAHIAGLVVAGEHNNPFPHCHVV
                     SSTTHKTLRGPRGGIIMTNDEEFAKKINSSIFPGIQGGPLMHVIAGKAVGFKHNLSDE
                     WKVYAKQVKTNAKKLGEVLINRGYDLVSGGTDNHLVLVSFLNKEFSGKDADIALGNAG
                     ITVNKNTVPGETRSPFITSGIRVGSPALTARGMKESEFELIANRIADVLDDIDNSSKQ
                     EKIKAELKELAHQFIIYDKAMF"
     gene            5285..5827
                     /locus_tag="RPW04_001466"
     CDS             5285..5827
                     /locus_tag="RPW04_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004320117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1882 domain-containing protein"
                     /protein_id="HDX6295555.1"
                     /translation="MQSIDLTLIKMITDHYYIKRDAILNKIEYKGRHFFDKFERIDEP
                     LNYNVQKEHEERKIIAAHSLISKNDKIENIVFDYNGRTPERFWHKAQLMLREEGFINF
                     TAYESKTPGHLHLYVHKGHTTLSEGYQIANRLSVMLAQKLPQEWRMFPSLDLPREFNI
                     LALPYALYQKERGASWSKHM"
     gene            5838..6605
                     /locus_tag="RPW04_001467"
     CDS             5838..6605
                     /locus_tag="RPW04_001467"
                     /inference="COORDINATES: protein motif:HMM:NF016895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HDX6295556.1"
                     /translation="MEENNKGLQDILLDKNEDDKSSKIRKILISVAGLVILFVIVLIV
                     MKLLNGGSPSTDTKEESLALPAEPELRVETNQPATTPNNEIFEQVPIISDTNSKDNFE
                     NIVNEYKNNQAAMNNNQTVAAPLKAPESVVPAKDNTPKAETNKNITPKVPTQKKAEPS
                     AKPAQKAAVTKPAKTGNLASGNYIQVASLSKVNSNDPFIKKIKENGFDYHAYETTVNG
                     KNVVKILIGPYNGAELNTNMEKIRKNISSGAFLFKVQ"
     gene            6605..7390
                     /locus_tag="RPW04_001468"
     CDS             6605..7390
                     /locus_tag="RPW04_001468"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDX6295557.1"
                     /translation="MKYFAVFGNPINHSISPRLHNLALQGYGLAGFYGRVHLEDGLEL
                     INTFNKLELSGANVTVPFKEIVLNQCDEIDETAKSIGSLNTLVKRNGKIFGYNTDAPG
                     FMLAISEFKDIESALILGAGGTARAICYILQKNGIDVEILNRSSSRAQSFKDCSFFTH
                     QDYKPKGYTLVVNTTSAGLADDHLPANRDILKQVLDSSKFAFDVIYNKNTPFLNLAKS
                     CSLTCKDGKDMLLFQAILSFNIFYENKFENEKIRSFMQEALFF"
     gene            complement(7406..7975)
                     /gene="recR"
                     /locus_tag="RPW04_001469"
     CDS             complement(7406..7975)
                     /gene="recR"
                     /locus_tag="RPW04_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDX6295558.1"
                     /translation="MPNQKLEKFNELVSCFEKIPGVGKKSALKYAYHVALQDSFFGLN
                     LAHTIEDAVRFLKHCSMCGGISENEICDICSDINRDKKTLCIVETPKDILTIEYSNSF
                     NGLYFVFDDANKLDKLKSNIKENGIKELLFALTPSINSDGMMLYIEDKLKDFDVSFTK
                     IAQGIPTGVSLENVDILSLTKAIKDRRSL"
     gene            complement(7956..9215)
                     /locus_tag="RPW04_001470"
     CDS             complement(7956..9215)
                     /locus_tag="RPW04_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDX6295559.1"
                     /translation="MKYSLTTKITVIFAIGFTVICALFFMFSKLQHESVLDKVKENQY
                     NSINWLLSLYKKSNMPEDWEQYFKNFNLAYIKDPNLEKIILNNGDLIERVDTPIGIIE
                     TIFYRNELFLRIKNQSVVIMLQSTLKGTNDSLLIGFIITIALFISLYVSIFKSLLPLK
                     NLRDDIRKFAAGNMDSIYCKNNIIKGDDEIAEVAYEFNNAACKIKELIMSRQLFLRTI
                     MHELKTPIGKGRIVSEMLDDETQKDRLVAIFERLNILINEFAKIEQLLSKSYALQYEN
                     YHFSLILDQTKDILLLDDFDNKVSVDIKEDALLRVDFQLFSLAIKNLIDNALKYSDDK
                     KAIIICDEEYICIKNKGNPLEKPIEHYKQAFIRDNASKNTGMGLGLYIIEHICAMHKF
                     GFLYEYTDGYHTFFITFKKPTNAKSKA"
     gene            complement(9212..9883)
                     /locus_tag="RPW04_001471"
     CDS             complement(9212..9883)
                     /locus_tag="RPW04_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDX6295560.1"
                     /translation="MINVLMIEDDPEFAQILSEYLLKFNIKVTNYEDPYLGLSAGIKN
                     YDLLILDLTLPGMDGLEVCKEIREKYDIPIIISSARSDVNDRVVGLQIGADDYLPKPY
                     DPKEMHARIISLIRRYKKTNEIQEETADTAFKVDDKRHEISYGGNVLTLTPAEYEILE
                     YLIKQHSFSVSREQLVYHCKSLKDKDSKSLDVIIGRLRSKIGDSSKSPKHIFSVRGIG
                     YKLIG"
BASE COUNT         3454 a         1425 c         1831 g         3223 t
ORIGIN      
        1 ataattttaa acttcgtagg taacttgctt attcaaaatt gagttaattt tgataattta
       61 ttactaaaaa ccaatgaaaa tgtgttataa ttttataaaa aatcaaaaat ggagttgtat
      121 tctatgcaaa ttgatgacaa aatgcttgag aaacttgaga aattaagcgc actaaaaata
      181 ccagatcaaa atcgcgaaga gtttaaatct cagctcggaa agattgttga ttttgttgat
      241 atattaaatg agttagactt agatggcata gaagctaccg taagcaccat aggaggcgga
      301 actccgttta gagaagatat ttcaaaagaa ggtagcgtta tagacggtat tttgacccat
      361 gctccgaaaa aacaaaatag atattttgaa gtaccaaaaa taatagagta aaatatgaat
      421 attgaaactc ttttaaaaac tgtgatgcat aacaaggcga gcgatctaca tttagtcggt
      481 agaagtgagc ctcaaatcag aattgatggt agcttaagac cgcttgaagg taaagttcta
      541 gatggaagcg atatagaaaa tttatgctac actattttaa ctgatgcgca aaaaagcgaa
      601 ttggaagaga acaaggattt agattttgct ctagaattac caggaatagg gcgttttaga
      661 ggtaattgct actatactat gaacggaagc ttagcggctg cttttagaat gatacctcta
      721 aatataccaa gtcttgatga tcttaatgct ccggctattt ttaaagagtt ggtaaaaaaa
      781 gaaaaaggtc ttgttcttgt tactggagga acgggagctg gaaaatcgac gactttagca
      841 gctttgctaa atgagataaa tattactgag cgaaaacata taatcaccat agaagatcct
      901 atagaatttg ttcatcaaaa taagaattct ctattttctc atagaaacgt aggcaccgat
      961 actaaatcgt ttgctagggc tttgaaatac gctcttagag aagatccgga tataatatta
     1021 gtaggtgatt taagagatcc ggagaccata tctatagcta tagcggccgc agaaacagga
     1081 cacttggtat ttggtacttt gcacacaaac tcagccgtac aaacaataaa tagaatagtc
     1141 gatagtttta atgagacaga gcaggctcaa gtaagaaata tgcttagcgt atctctaaat
     1201 gctattatat ctcaaactct tgtgccaaaa gcagataacg gcagatttgc cgttcatgaa
     1261 gttttgataa ataatcatgc aatttcaaat ttgatcagag aaaataaatc tcatcaaatt
     1321 tactctcaaa tacaattaaa tcaacaaaat acaggtatgc aaacacaaac tcaagcgatg
     1381 gaaaaggcgg tgcaaatggg tattataaca aaagaaaacg ctataagata ttcaacaaat
     1441 cagcaagaat tagctggaaa gttaggtgca atttaatgaa ttttgtaact tggtttgata
     1501 ttattgttat agcccttgtg gttatattag gtataaaagg tataataaac ggacttgtaa
     1561 aagaggtttt tgggcttata ggacttatag gtggagttat tatagcaagc agaaatgctc
     1621 aaagcgtagg agatcttata agcagcaata tttatcaatt aaacgattct tcttcatttt
     1681 tctttggatt tttagtaact ttaattctat tttggtttgt atgcttgata gctggaaata
     1741 tattttcaaa gatgttgtct ctaagcggac ttgggttttt agatagaata ttaggatttt
     1801 ttataggaag cgctaaaata tttttagttt ttgctatatt ttgcgctatt atatcaaata
     1861 taagtgtatt aagccaaaaa attgagccgt attttgaaaa tagcaaggtt tatccggttc
     1921 ttttggctag tggaaagttt ataatgaata tagatttaaa tagaacaaaa caagatgcaa
     1981 tagacaaatt tgataatgag cctatgagtg ttgatagtaa tgagacaaat agtacaaagg
     2041 aggatagata gctaatgaca aatgttgata atatcgaata cgacacgctt cttgatcgct
     2101 tcaagaaggt tttaagagat aatggtctaa aatatacaaa gcaaagagag attttattga
     2161 aaactcttta taataatagt gatcacttta caccagagca actttatctt tatataaaag
     2221 atagtcatcc tgatttaaat ttaggtatcg ctactgttta tcgtagtcta aatttattag
     2281 aagaatccgg aatggtgact tcaattagtt ttggggctca aggtaagaaa tttgagttag
     2341 cgacaaaacc gcaccatgat catatgatat gcagaacttg cggaaatata atcgaatttg
     2401 aggatccgat tatagaaaaa agacaatcta ttatatcaaa agaacacgga tttaagctca
     2461 ctggtcatat gatgcagctt tatggagtat gccaagagtg caacaagaaa aagaattgag
     2521 gtaagatacg tgatatttga aaatgaatta gaattaacaa ggttagctaa agcagatgag
     2581 cttagaagct taggagtaaa tccatatcct cactttttaa aacgcgatat gagtattagc
     2641 gagtttaaaa ccaaatttgc ctatatcaaa gatttaaatg gcgatgaaaa aaaagcagat
     2701 gaagaagtaa ctatttcagg gcgtttgaaa ctaaaaaggg tggccggaaa atctactttt
     2761 gcaaatatgg aagatgaaaa tgataatatt caaatttact actctttagg cagtataggc
     2821 gaagaagatt atactaaatt taaaaaaaat ctggaagtcg gagatatagt attagtcacc
     2881 ggatacgcgt ttgtaacaaa aaccggtgag tttagtatcc atgcaagtaa aatagtatta
     2941 gctagtaaag ctatcagtcc tcttccagag aagtttcacg gtcttaccga tatcgagatg
     3001 agatatcgtc aaagatatct tgatatgata atggataaag atgttagagc cgatttcgta
     3061 aaacgctcac ttataataag cactattcga agattttttg aagataaagg ctttttggaa
     3121 gttgaaactc ctatgatgca tccgatagct ggcggggcaa acgcaaagcc gtttatcact
     3181 caccataacg cactagatgt ggataggtat ttgaaaatcg ctccggagtt atatctaaaa
     3241 agacttattg taggtggtat ggaagccgtg tttgagatga atagatgttt cagaaatgaa
     3301 ggaatggacc ttactcataa tccggaattt acaagcattg agttttactg ggcatggcat
     3361 aattattttg aagcaatgga tttaactgaa gagttatttg ctgttttatt agatagatta
     3421 aatttaccac aagttatcga atttgatggt aaaagtattg atttttctaa gccttttgct
     3481 agagtaaaat acatagacgc catagttgaa atcggtggta ttagcagaga tatagttact
     3541 aataaagata aaattttatc aaaattaaaa gcagataaat ttgaagcgaa tgataagctg
     3601 gatcttggtc atttacaagc tgaacttttt gataattatg ttgaagataa gctaataaat
     3661 ccaacattta tagtggattt tcctatatct ataagcccgc tttcaagaag aagtgatgca
     3721 gataaaaatg tagccgaaag atttgagctg ttcatcgcag gtcgtgagtt ggcaaatgca
     3781 tttaatgagt taaatgatcc agttgatcag tatgagagat ttaaatccca aatagaagca
     3841 aaaaatgcag gagatgatga ggcgcatgag atggatgaag attattgtca agcattaggc
     3901 tatggtatgt ctccaaccgt aggatgggga cttggcgttg ataggttagt aatgctgctt
     3961 ctaaataaaa agtctatacg agatgttata ctttttcctg ctatgaaacc actaaaaacc
     4021 gaaaataagg agaataaaaa atgagtttgg aaagttttga taaggatatt tactctttag
     4081 taaataaaga gttagaaaga cagtgcgatc atttagagat gatagctagc gaaaatttta
     4141 catatcctga tgttatggaa gttatgggct cggtactcac aaataaatat gctgagggat
     4201 accctagcaa aagatattat ggtggttgtg agtttgtaga tgagatagaa caaatagcaa
     4261 ttgatagatg taaaaagctt tttggttgcg agtttgcaaa cgttcagcca aatagcggaa
     4321 gtcaggcaaa tcaaggcgtt tatggagcgt ttttgaaacc tggtgataaa atacttggta
     4381 tggatctaag ccatggtgga caccttactc acggttctaa agtttcaagc tctggaaaaa
     4441 actatgagag ctttttctac ggtgttgagc ttgatggacg tataaattat aataaagtag
     4501 aagagatagc aaatataact aaacctaaaa tgatagtttg cggtgctagt gcttatgcta
     4561 gagagattga ttttaagaaa tttagagaga tagccgatag cgttggagca tatttatttg
     4621 ccgatgttgc tcatatagca ggtcttgtag tagcaggaga acataacaat ccatttcctc
     4681 actgtcacgt tgtaagttca actactcata aaacattaag aggtccaaga ggcggtatca
     4741 tcatgacaaa tgatgaggaa tttgctaaaa aaataaatag ttctatattt ccgggaattc
     4801 aaggcgggcc gcttatgcac gtgattgctg gaaaagcagt tggatttaag cataatctta
     4861 gtgacgagtg gaaagtttat gctaagcaag taaagacaaa cgctaaaaaa ctcggagaag
     4921 tcttaataaa cagagggtat gatctagtaa gcggcggaac agacaatcac cttgttctag
     4981 taagtttttt aaataaagaa tttagtggaa aagatgcaga tatcgcttta ggtaacgcag
     5041 gaataacagt aaataaaaat acggttccgg gcgaaactag aagtccgttt ataacaagtg
     5101 gtataagagt aggtagcccg gcacttactg caagaggcat gaaagagagt gaatttgagc
     5161 ttatagcaaa ccgtatagca gatgttttag atgatataga taattcttca aaacaagaga
     5221 agataaaagc agaactaaaa gagcttgctc accagtttat tatttatgac aaggcgatgt
     5281 tctaatgcag agtatagatt taactttaat taaaatgata acagatcact attatataaa
     5341 acgtgatgct attttaaata agattgaata taaaggtagg catttttttg ataaatttga
     5401 aagaatagac gagcctctta attataatgt acaaaaagag catgaagaac gtaagataat
     5461 agctgctcat tcattaatta gtaaaaatga taagatagaa aatatagttt ttgattataa
     5521 tggtagaact ccagagcgtt tttggcataa ggcacaactt atgcttagag aagagggttt
     5581 tataaatttt acagcgtatg aaagtaagac tccgggccat cttcatctgt atgttcataa
     5641 aggtcacacc actttaagcg aaggatatca gatagcaaat agattatctg ttatgttggc
     5701 tcaaaagttg cctcaagaat ggagaatgtt tcctagtctt gatttgcctc gcgagtttaa
     5761 tattttagcg ttgccttatg ctctatatca aaaagagcgt ggagctagct ggtcaaagca
     5821 tatgtaagga gaaagatatg gaagagaaca acaaaggtct gcaagatata ttgctagata
     5881 aaaatgaaga tgataaatct agtaaaataa gaaaaatttt aatcagtgtt gctggactgg
     5941 taatactgtt tgtaatagtt cttatagtca tgaaattgtt aaatggtggc agtcctagta
     6001 cagatactaa agaagagagt ttagctcttc cagcagaacc ggagcttaga gtagaaacaa
     6061 atcagccggc tactactcca aataacgaaa tttttgaaca agtccctata atttcagaca
     6121 ctaattctaa ggataatttt gaaaatatag taaatgagta taaaaataat caagccgcta
     6181 tgaataataa ccagacagtt gccgctcctt taaaagcacc tgaatctgta gttcctgcta
     6241 aagataatac tccaaaagcc gaaacaaata aaaatataac tccaaaggta ccgactcaga
     6301 aaaaagccga gccttcagct aaaccagctc aaaaagcagc tgttactaaa ccggctaaaa
     6361 caggaaattt ggctagtgga aactatatac aagtagcgtc tctttctaag gtaaattcaa
     6421 atgatccgtt tataaaaaag atcaaagaaa atggatttga ttatcatgcg tatgaaacaa
     6481 ccgtaaatgg aaaaaatgtg gtaaaaatct taataggacc atataatgga gcagagctaa
     6541 atacaaatat ggaaaaaatc agaaaaaata tatcaagcgg tgcgttttta tttaaggtgc
     6601 agtagtgaag tattttgctg tttttggaaa tcctataaat cattctatat ctccacgcct
     6661 acataacctt gctttacaag gttatgggct ggctggattt tatggcagag ttcatttaga
     6721 agatggactt gagttaataa atacatttaa taaacttgaa ttgagtggag caaatgtcac
     6781 ggttccattt aaagagattg ttctaaatca gtgtgacgaa atagatgaaa ctgctaaaag
     6841 tataggttcg ttaaatacgc ttgtaaaaag aaacggtaaa atatttggat ataatacgga
     6901 tgcacccgga tttatgcttg ctataagtga gtttaaagat atcgaaagtg cgttgatttt
     6961 gggggctggc ggaacggcta gagctatttg ttatattctt caaaaaaacg gtatagatgt
     7021 agaaatatta aatagaagca gcagcagagc acagagtttc aaagattgca gtttttttac
     7081 acatcaagac tataagccta aaggctacac tttagttgtt aatacaactt ccgcgggact
     7141 tgcggacgac catttgccgg ctaatagaga tattttaaaa caagtgttag atagttctaa
     7201 atttgcattt gatgttattt ataataaaaa tactcctttt ttaaatttag caaagtcgtg
     7261 ttctctcact tgcaaagatg gaaaagatat gctgcttttt caggctatct tatcgtttaa
     7321 tattttttat gaaaataaat ttgaaaatga aaaaattaga tcttttatgc aagaagcttt
     7381 gtttttctaa atttaaattt taactttata aagatcttct atcttttatc gctttagtca
     7441 gagataaaat atctacattt tcaagactaa ctccagtagg tatgccttgt gctatttttg
     7501 taaaacttac gtcaaaatct tttaatttat cttctatata tagcatcata ccatcgctat
     7561 ttatactagg agttaaagca aaaagtagct ctttgattcc attttctttg atattggatt
     7621 tcaatttatc aagtttattt gcatcatcga aaacaaagta caaaccgtta aatgagtttg
     7681 aatactctat ggttaatata tcttttggcg tttctactat acaaagggtt tttttatctc
     7741 tatttatatc gctacatata tcacagatct cattttcgct tattccaccg cacattgagc
     7801 agtgttttag aaatcttaca gcatcttcta tggtatgtgc taaatttaaa ccaaaaaacg
     7861 agtcttgtag ggctacgtga tacgcatatt ttagtgctga ttttttacct actcccggta
     7921 ttttttcaaa acaagacaca agctcgttaa atttttcaag cttttgattt ggcatttgtc
     7981 ggctttttaa aagttatgaa aaatgtatga taaccgtctg tatattcata taaaaatcca
     8041 aatttatgca ttgcgcaaat atgctctatg atatataatc caagtcccat acccgtattt
     8101 tttgatgcgt tatctcttat aaatgcttgt ttataatgct caataggttt ttcaagcgga
     8161 tttcccttgt tttttataca gatgtattct tcatcacata tgatgatagc ttttttatca
     8221 tctgaatatt ttagcgcatt gtcgattaga tttttaattg ccaaagaaaa tagctgaaaa
     8281 tcaaccctta aaagagcatc ttcttttata tctacgctta ctttattgtc aaaatcgtct
     8341 aataacaata tatcttttgt ttgatcaagt atcaaactaa aatggtagtt ttcgtattgt
     8401 aaagcatagc ttttacttaa tagttgttct atttttgcaa attcgtttat caagatattt
     8461 aatctttcaa atatagctac taatctatct ttttgtgttt catcgtctaa catttcgctg
     8521 acgattctac cttttccgat aggagttttt aactcatgca tgatagttct aagaaacaac
     8581 tgtcttgaca tgataagttc ttttatttta catgcagcat tattgaactc ataagcgact
     8641 tcggctattt cgtcatcgcc ttttattata ttgtttttac agtatatgct gtccatattt
     8701 ccagcagcaa attttcttat atcgtctctt aaatttttaa gcggcaaaag acttttaaat
     8761 atagaaacat ataaagatat aaaaagtgct atagtgataa taaatcctat taaaagtgaa
     8821 tcatttgtcc cttttaaagt gctttgaagc attataacaa cactttgatt ttttattctc
     8881 aaaaatagtt cgtttctata aaaaatagtt tctattatac ctattggagt atctactctt
     8941 tcgatcagat caccgttatt taatattatt ttttctaaat tcggatcttt gatatatgct
     9001 agattaaaat ttttaaaata ctgctcccaa tcttctggca tatttgactt tttgtatagt
     9061 gaaagtagcc agtttatgga gttatactgg ttttctttta ctttatctaa cacgctttca
     9121 tgctgaagct ttgaaaacat aaaaaatagt gcacaaatta cagtaaatcc tatggcaaag
     9181 ataactgtaa tttttgtggt taaagagtat ttcatcctat taatttataa ccgattccgc
     9241 gcactgagaa tatatgttta ggagattttg aactatcgcc tatttttgat cttaatcttc
     9301 ctataattac atcaagactt tttgaatctt tgtctttcaa gcttttgcag tgatatacta
     9361 gctgttcgcg agatactgaa aaactatgtt gttttatgag atattctaag atttcgtatt
     9421 cggcaggggt tagtgttaaa acattaccgc catatgaaat ttcatgacgt ttatcatcta
     9481 ctttaaatgc cgtatctgca gtctcttctt gtatctcatt tgttttttta tatcttctta
     9541 ttagacttat gattctagcg tgcatctctt ttggatcata gggttttggc aagtagtcat
     9601 cggctcctat ttgtagtcct acaactcggt catttacatc gcttcttgcc gagcttatta
     9661 ttattgggat gtcatatttt tctcttatct ctttacagac ttctaagcca tccattcccg
     9721 gtaaagttag atccaaaata agcaggtcat agtttttaat acccgcgcta agtcctaaat
     9781 atggatcttc gtaattagta actttgatat taaatttcaa aagatattca gatagtattt
     9841 gagcaaactc tggatcatct tctatcatta ggacatttat cattttttac tcctgtaatt
     9901 ttatgcttta ttatatcaaa aaaatagtaa aaa
//
LOCUS       DAPPKW010000067         9784 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.067, whole genome shotgun sequence.
ACCESSION   DAPPKW010000067 DAPPKW010000000
VERSION     DAPPKW010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9784
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.067"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..1258
                     /locus_tag="RPW04_001472"
     CDS             <1..1258
                     /locus_tag="RPW04_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016647503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="conjugal transfer protein TrbE"
                     /protein_id="HDX6295561.1"
                     /translation="NTLNLAHLIPLASIWAGEKYNSSDKFPPESPALMQVVTSGATPF
                     RLNLHVGDLGHTLIFGPTGAGKSVLLANIALNFQKYQNAKVFAFDKGRSLLALTLATG
                     GTHYDVAGENSSLAFAPLSSIKSQSQIAWAESWIETCLKLQNIDITPKHKKLIHEALI
                     THVETNSRSLTEFISSLQDNDLRDALSHYSVSGSAGFLLDAENDGLNLNNNITTFEIE
                     DLMNLGEQNIIPTLLYIFNKIEQRLDGSPTLLIIDEAWIALGHPAFKGKIVEWLKVLR
                     KANCAVVLATQSLSDSAKSGILDILQESCPTKIFLPNVEAWNKGSDNTLGPYDFYKAF
                     GLNDVQISILQEGIYKQDYYYMSPLGTRLFSLALQKAALAFTAASDKISVKRIKALHE
                     MYKEKWPYKWLEEKGINYSNLQGDMK"
     gene            1255..1794
                     /locus_tag="RPW04_001473"
     CDS             1255..1794
                     /locus_tag="RPW04_001473"
                     /inference="COORDINATES: protein motif:HMM:NF014548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295562.1"
                     /translation="MNEVVLFENKDFGNIRVLGDHLKPMFVAKDVAEALGYTNTNDAI
                     QKFCKGVAKRYPLSTDGGIQNVRVIYEPDLYRLIFGSKLKSAIKFQNWVFEKVLPKIR
                     QQGYYSSNQKLALQDRRLDLPDTPCRDIIEQQIKKIEMKENVEFVSLISYEIKETFKD
                     GKQSTTQKVHFNVRKRRDI"
     gene            1791..2531
                     /locus_tag="RPW04_001474"
     CDS             1791..2531
                     /locus_tag="RPW04_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002908158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295563.1"
                     /translation="MKKLFLFLAFCFSANLFAVEPDMLTGDRRTACEVLLCLSSGTRP
                     AECNPPLARFFSIKFKKPWKTLQARRDFLKLCPTDTGDTAEDLVMSDYKEILANSEDP
                     NQCTPPYLNRQLQNGRVSYSLNNKYYEKQGYKNNINNIDNGVRINPNMPSFCYALINH
                     QYTDLQMPKYNCSGEFYTQIDWQNGYRLNLLGIGSSHFINSEPSAYTNLPNNEKHKIT
                     YHVDNNHAGYYVTEYYQIIRFNKTCWSY"
     gene            2857..3720
                     /gene="trbJ"
                     /locus_tag="RPW04_001475"
     CDS             2857..3720
                     /gene="trbJ"
                     /locus_tag="RPW04_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002842176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbJ"
                     /protein_id="HDX6295564.1"
                     /translation="MVQKNHLQSEVEFSHRVAALWRTPRNYTKKLSKFFIPFILSTQL
                     VASGIPTVDVAAIAQQLISYQQQIKDYAMQFQQYQQLYSQLQQQIQMVKMQTQNLKTL
                     SSYDWQNLNILLYKAKNVMQRVDAVSYDLGNVSRKFEEIYKDFNGYSSDINSAKDENA
                     RNKIFSDRYKQIQETNQNTLNGTLQKLELANKEFENEDRIISDLKNRSQNAEGNLQAI
                     QATNDLLVYQVDEARKLRVALMDQTNALANYMAMQNNQRIMQQAKSEAFLNRNNINNP
                     YEHTNSFNPKF"
     gene            3767..4030
                     /locus_tag="RPW04_001476"
     CDS             3767..4030
                     /locus_tag="RPW04_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HDX6295565.1"
                     /translation="MKKIVLSSLLSLGLLAFLAGCGQEAKTQEYYSQNLKEAEAKVAE
                     CKKLEKFNETEQIDCTNANRALFLRNDHIDNPYDTNKTWSPTF"
     gene            3948..5216
                     /gene="trbL"
                     /locus_tag="RPW04_001477"
     CDS             3948..5216
                     /gene="trbL"
                     /locus_tag="RPW04_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbL"
                     /protein_id="HDX6295566.1"
                     /translation="MQIEHYFYATIISTIHTIQIKLGRQHSNNKIKILFILFILFTLN
                     SEALAIDSSQSILNTLHIGLKGWIPTIKSACLYVFWTLVAIDLVWTFGIQALRGFEIG
                     EFLATLIKKIVFIGVIIFLFQVDYWLKLLFDSFSQLATNATGTSILPGSIITSGVEII
                     LAIWDSAGINIAKTLFLLLCGLIILIGFVLMAINLLIAYLKFYIMNIIVFFALALSGL
                     ERFKEIGLNPIMTAIKVGVELFMIQAFMGLCVNITDKAFYELSQNMTVDLTLQIVVIA
                     LIFCMITKMIPGLIEAVFNGSIGESAGAAAGFRAVAAMAAGAVATGVAGSIGVTRAMN
                     AAKALHLAEGGKGGMDLVKGVAKNLATTGGEHLKDNFRHGRMPNDIANRLQEKAKSAM
                     NSNLSGGFGGSSNVPNEPYISGVNESGASK"
     gene            5380..6063
                     /locus_tag="RPW04_001478"
     CDS             5380..6063
                     /locus_tag="RPW04_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002907783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbF"
                     /protein_id="HDX6295567.1"
                     /translation="MSFFKKKEQINQSINNPYLNAKTEWLERYGDYISRARNWQIVAI
                     LSIIVTIISVFYIGYIGSQNKLIPYVIEVDKLGNTANVGMVRNVDIKNPNVIKYSLNT
                     FIYSWRSIWGNPEIQRKFIFDAYKYIEPGSKAFLFLNDSYEKSNPFEQGTKQNVRIKV
                     DSIVLQTSDTWQIQWRETTTNLAEEQISDIVYRGFFKVKQIIPTKEEDILKNPLGIFI
                     TDFNFAKIL"
     gene            6082..6996
                     /gene="trbG"
                     /locus_tag="RPW04_001479"
     CDS             6082..6996
                     /gene="trbG"
                     /locus_tag="RPW04_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002844655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbG"
                     /protein_id="HDX6295568.1"
                     /translation="MKKLILIPAILSATIAFGLSESERDFANLTEKEKKDLAIAQKWI
                     DEKTTTIPGANGEVVFLFGKSMPSIITAPLRLTNIALEPGEEIKDVQIGDSIRWIVSL
                     SMSGKDPITSHIIIKPTEKNLQTTLNIMTDKRVYKLNLVSEDKKFMPGVAFIYPGEIS
                     ASLQNYKQKLKEKSQSKNFQKIDETVPSNIDSLDFGYSIEGKSDFKPLRVYNDGVKTY
                     IQMPKNMKFYEAPALMILDKNDNKEIVNYRLKIDTFIVDRLFNKALLISGVDDKGILI
                     KKMSNKINQEIVNNVLYDLSLKNEEKGN"
     gene            6997..7434
                     /locus_tag="RPW04_001480"
     CDS             6997..7434
                     /locus_tag="RPW04_001480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295569.1"
                     /translation="MRLLFFTILTFIFIGCTPKAGPNYFHSINNVPKDIQITNLNIIA
                     DDMIDFISHHKTPNNTTFYLYTEDKDRSFFDYLSNKFRQKGYAITENHDLKNLTFLSY
                     TIQKTGNFLLVTYNFNESKINRIYTIENNKITSSGSISTFNFN"
     gene            7444..8661
                     /locus_tag="RPW04_001481"
     CDS             7444..8661
                     /locus_tag="RPW04_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019109040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbI"
                     /protein_id="HDX6295570.1"
                     /translation="MSDKNLLEICTSPEKLSNTGNKRLSKVPILIIAIIVILVLFAVF
                     YTANDRAKKQAAKQTGEQQEEKAVSTTNKDINSMISSLEAQGIDTKTQKNIDLPVKNV
                     APELKNDNIQPLAEYKPIPTLNTQPKTEIDEREIRLKQDMRLKALASKTGIEVRNSNS
                     IQPQTKDSIYQEPINLQNEPNLQNINNSGDNNDKFLSKLRNNGYLEQVKQKPISAYEI
                     KAGWNIPAVLITGVNSELPGQILAQITQNVYDTATGKYLLIPQGTKVVGDYSNNVIYG
                     QSRLLVAWNKIIFPNGDTLNIGNMQGASMDGYTGFEDQVDNHYFRIFGSAFLLSSITA
                     GIALSDNSQGNQTETARDKAIGQAIQQMGQVASKMIRKNMNISPTLIIRPGYKFNIFV
                     TKDIVLEPLELKQ"
     gene            8658..9449
                     /locus_tag="RPW04_001482"
     CDS             8658..9449
                     /locus_tag="RPW04_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HDX6295571.1"
                     /translation="MSLYKKATGHLIINPAKAGLGLVSLDSKDTNEYNCNNDRVSNYH
                     LKAPFWSLNLATGVEPVARTPRNYIQKFFFYSTLFFISNIFGNEIDLSLIEQCKNPNV
                     DTEIIKQIIKVESNYKQFAINVNKVGSFNLKTKKEAKALADFYIAKGYSVDIGLMQFN
                     SSNLKEFSYDLDDILEPCNNIKAGSDIFYLAYESTDPNLDKSERINKALSIYNTGNQQ
                     LGFKNGYVAKFDIQNSNNIEIQKIARQSNTKLSLVFQPYNLKDKK"
     gene            9446..>9784
                     /gene="ssb"
                     /locus_tag="RPW04_001483"
     CDS             9446..>9784
                     /gene="ssb"
                     /locus_tag="RPW04_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002907809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDX6295572.1"
                     /translation="MTNNIVIAGRLVADAELFFTNNGSAICNFTLANNKRYKDIEKST
                     FIEASIFGNYAESMNKYLKKGVSIDVIGELVQESWSKDGKIYYKHKIKVKEIDFRTPK
                     DNISEANFENE"
BASE COUNT         3840 a         1412 c         1622 g         2910 t
ORIGIN      
        1 aaatacacta aatttagctc atttaatccc tttggcgtct atttgggctg gtgaaaaata
       61 taattctagt gataaatttc cacctgaatc tccagccctt atgcaagtag taactagcgg
      121 cgcaacgcca ttcagactta atttacatgt aggagactta ggtcatacac tgatttttgg
      181 tcctactgga gctggaaaat ctgtattatt agcaaacatt gcactaaatt ttcaaaagta
      241 tcaaaatgcc aaagtttttg cttttgataa aggaagaagc cttttagcct taacactagc
      301 aacaggtgga acgcattacg atgttgcagg tgaaaattca tctttagcat ttgctccact
      361 tagcagcatt aaatcacaat cacaaatagc ttgggctgag agctggattg aaacttgtct
      421 aaaacttcaa aatatagata ttacaccaaa acataaaaaa ttaatacatg aagccctaat
      481 cactcatgtg gaaacaaact caagaagttt gactgaattt atctcttcat tacaagataa
      541 tgatttaaga gacgcacttt ctcattactc tgtttctgga agtgctggat ttttactaga
      601 cgcagaaaat gatggcctga atttaaataa caatataaca acatttgaaa tagaagattt
      661 aatgaatctt ggcgaacaaa atattattcc cacactactt tatatattta ataaaatcga
      721 gcaaagatta gatggaagtc cgacactact gatcatagat gaagcttgga tagctcttgg
      781 tcaccctgct tttaaaggaa aaatagttga atggctaaaa gttctaagaa aagcaaattg
      841 tgctgttgtt cttgcaactc aaagcctaag cgatagtgca aaaagtggaa ttttagatat
      901 tttacaagag agttgtccaa caaaaatatt tttaccaaat gttgaagctt ggaataaagg
      961 aagtgataat actctaggtc cttatgactt ttataaggca tttggattaa atgatgttca
     1021 aattagcata ttgcaagagg gaatttataa gcaagattat tactacatgt cgccactagg
     1081 cacaaggctt ttttctttgg ctttacaaaa agcagctctt gcatttactg cagcaagcga
     1141 taagattagc gttaaaagga taaaagcact gcatgagatg tataaagaaa agtggccata
     1201 taaatggctt gaagaaaaag gtattaatta ctcaaattta caaggagata tgaaatgaac
     1261 gaagtagttt tatttgagaa taaagatttt ggaaacataa gagttttagg cgatcatctt
     1321 aaacctatgt ttgtagcaaa agatgtagca gaagctttag gatatacaaa tacaaatgac
     1381 gctatacaga agttttgcaa gggggtcgcg aaacgctacc ccctttccac agacggagga
     1441 atacagaacg ttcgtgtaat ttatgagcct gatttatatc gtttgatatt tggctcaaag
     1501 ttaaaatcag ctatcaaatt tcaaaactgg gtctttgaaa aagttttacc aaaaattaga
     1561 caacaaggat attactcaag caatcaaaaa ctagctttgc aagataggag attagatctt
     1621 ccagatactc catgcagaga tataatagaa caacaaatta aaaaaataga gatgaaagaa
     1681 aatgtagagt ttgtttcatt aatcagctat gaaataaaag aaacttttaa agatggcaaa
     1741 caaagcacca ctcaaaaagt gcattttaat gtgagaaaaa ggagagacat atgaaaaagt
     1801 tatttttgtt tttggcgttt tgttttagtg caaatttatt tgcagtcgag ccagatatgc
     1861 ttactggcga tagaagaaca gcttgtgaag tattgctttg cctctcaagc ggaacaagac
     1921 ccgctgaatg caatccacca cttgctagat ttttttcaat caaatttaaa aagccttgga
     1981 aaacacttca agctagaaga gattttctaa aactttgtcc tactgatact ggagatactg
     2041 cagaggattt ggttatgagt gattataaag aaattttagc aaattcagaa gatccaaatc
     2101 aatgcacacc gccatatcta aatagacaat tgcaaaatgg aagagttagt tattcattaa
     2161 ataataaata ctatgaaaaa caaggttata aaaataatat caataatatc gataacggag
     2221 taagaatcaa tccaaatatg cctagttttt gttatgctct tatcaatcat caatatacag
     2281 atctacaaat gcctaaatac aattgcagtg gagaattcta tactcaaata gattggcaaa
     2341 acggctatag attaaattta ttaggaatag gatcaagtca ttttataaat tcagaaccta
     2401 gtgcatatac aaatttacca aacaatgaaa aacataaaat cacttatcat gtagataata
     2461 atcacgctgg atattatgtg acagaatatt atcaaattat tagatttaat aaaacttgct
     2521 ggagttatta agatggaaaa tatatttaat caaaaagcca caagggaatt atgcccccac
     2581 aaaagtgggg caaagctagt aagccttgac aataattata caaagaagta taattacata
     2641 cataattcga agcattcaaa tcacctcaat tctgaggtaa aatttcgcct caaggttcca
     2701 gccttgtggc gaacctcaaa agaattatac aataaaaatc agtctagtaa aaacactaat
     2761 caaaaagcca caagggaatt atgcccccac aaaagtgggg caaagctagt aagccttgac
     2821 aataattata caaagaagta taattatgag cataatatgg ttcaaaaaaa ccacctccaa
     2881 tctgaggtag aatttagcca tagggttgca gccctgtggc gaaccccacg aaattatacc
     2941 aaaaaacttt ctaaattttt tattccgttt attctctcta cccaactagt tgctagtggt
     3001 attccaacgg ttgatgttgc tgcaatcgcc caacaactga tcagctatca acaacagatt
     3061 aaagactatg caatgcaatt ccaacaatat caacaactat actcgcaatt gcaacaacaa
     3121 attcaaatgg ttaaaatgca aactcaaaat ttaaaaacac tctctagcta tgattggcaa
     3181 aatttaaata ttttgttata taaagctaaa aatgttatgc aaagagtaga cgctgtgagt
     3241 tatgacttag gtaatgtatc aaggaaattt gaagaaatct ataaagattt taacggatat
     3301 tctagcgata taaactcagc taaagatgaa aatgccagaa ataaaatatt ttctgataga
     3361 tataaacaaa tacaagaaac taatcaaaat actttaaatg gcacacttca aaaactagaa
     3421 ctagctaata aagaatttga aaacgaagat agaattatat ctgacttaaa aaatcgctca
     3481 caaaacgcag agggtaattt acaagctatt caagctacaa atgatttatt agtatatcaa
     3541 gtagatgaag caagaaagct tagagttgca cttatggatc aaactaatgc tctagctaac
     3601 tatatggcaa tgcaaaataa tcaaaggata atgcaacaag ctaaaagtga agcatttttg
     3661 aatagaaaca atataaataa tccatatgaa catacaaatt catttaatcc gaaattctaa
     3721 caaggtataa ttatgttaca aaatatagat tacaaggaga tacaaaatga aaaaaattgt
     3781 tttaagcagt ttattgagtt taggcttatt agccttttta gcaggttgtg ggcaagaagc
     3841 aaaaacacaa gaatattatt cgcagaattt aaaagaagca gaagcaaagg ttgcagagtg
     3901 caagaagttg gagaaattca atgaaaccga acaaatcgat tgcactaatg caaatagagc
     3961 actattttta cgcaacgatc atatcgacaa tccatacgat acaaataaaa cttggtcgcc
     4021 aacattctaa taataagata aaaatattat ttatcttatt tattttattt acactcaatt
     4081 ctgaagcact ggctatagat agtagccagt caattttaaa tactcttcac attggattaa
     4141 aaggctggat tccaactata aaatcagctt gtctttatgt cttttggact ctcgtcgcaa
     4201 ttgacttagt ttggactttt ggaatacaag ccttgcgtgg ctttgaaata ggagaatttt
     4261 tagcaacact gattaaaaaa attgttttta ttggagttat aatattttta tttcaagttg
     4321 attattggct taaattacta tttgatagct tctcgcaact cgcaactaat gctactggaa
     4381 cttcaatatt gccgggaagt attataactt ctggtgtaga aattatattg gctatttggg
     4441 attcagcggg tataaatata gcaaaaactt tatttttact actgtgtgga ctgattattc
     4501 ttattggatt cgttttaatg gctataaatc tgcttatagc atatctcaaa ttttacatta
     4561 tgaacattat agttttcttt gctttggcgt taagtggttt agagagattt aaagagatag
     4621 gtttaaatcc tataatgaca gcaataaaag ttggggttga attatttatg attcaagctt
     4681 ttatgggatt atgcgttaat ataaccgata aagcatttta tgaattatcc caaaatatga
     4741 cagtagattt aacattacaa atagtggtta tagccttaat cttctgtatg ataacaaaaa
     4801 tgattcctgg actaatcgaa gcagtgttta atggaagcat tggagaaagt gcaggagctg
     4861 ctgcaggttt tagggctgtt gccgccatgg cagcaggtgc agtagcaact ggggttgcag
     4921 gatctatcgg cgttactcgt gctatgaacg ctgccaaagc cttacattta gcagaaggtg
     4981 gcaagggtgg aatggacttg gttaaaggag tagcaaaaaa tcttgctaca acaggtggcg
     5041 aacatctaaa agataacttt agacacggaa gaatgccaaa tgatatagca aatagattac
     5101 aagaaaaagc aaaatcagca atgaattcaa atcttagtgg tggatttggt ggtagctcaa
     5161 atgtgccaaa tgagccttat atttctggtg taaatgaatc aggagcaagt aagtgataaa
     5221 taaaatagat aaaactactg caacggtgat aagtccctgc gatagaagtt atgaattcga
     5281 gctttttctc gttattcaag gtccataacc tttttaccgc ttatcacttc ggtagaatga
     5341 ttatatcata aataaattaa tgtaaaagga gaaaataaaa tgagtttctt taagaaaaaa
     5401 gagcaaatca atcaaagcat taataaccca tatttaaatg ctaaaacaga atggctagag
     5461 agatatggcg attatatttc acgtgcaagg aattggcaaa tagtagccat actaagcatt
     5521 atagttacga taatttctgt tttttacata ggttatatag gttcacaaaa caagctaata
     5581 ccttatgtaa tagaagtaga taaacttggc aatacagcaa atgtgggtat ggtaagaaac
     5641 gtagatataa aaaatccaaa tgtaattaaa tatagcctaa atacttttat ttattcttgg
     5701 cgttcgattt ggggaaatcc agaaattcaa agaaaattca tctttgacgc atacaaatat
     5761 attgaaccag gatcaaaagc atttttattt ttaaatgata gttatgagaa atcaaatcca
     5821 tttgagcaag gcacaaaaca aaatgttaga ataaaagtag atagtatagt attgcaaaca
     5881 agtgatacat ggcaaataca atggagggaa acaacaacaa atttagccga agaacagata
     5941 tcagatattg tttatagagg attttttaaa gtaaaacaaa ttatacctac aaaagaggaa
     6001 gatattttaa aaaatcctct tggtatattc attactgatt ttaatttcgc aaaaatttta
     6061 taaaacaaaa ggaataatta tatgaaaaaa ttaatattaa taccagcaat tttaagtgct
     6121 actatagcat ttggattgag tgaaagtgaa agagattttg caaatctaac cgaaaaagaa
     6181 aaaaaagatc ttgctatagc tcaaaaatgg atagatgaaa aaacaacaac catacctgga
     6241 gcaaatgggg aagtagtttt tttatttgga aaatctatgc ctagcataat cactgcacct
     6301 ttaagactta caaatatagc tcttgaacca ggagaagaaa ttaaagatgt acaaatagga
     6361 gatagtatta gatggatagt atctcttagt atgagcggaa aagatcctat tacttcacat
     6421 ataattatta aacctactga aaaaaatttg caaaccacat taaatattat gaccgataaa
     6481 agggtatata aattaaattt agtttcagaa gataaaaaat ttatgcctgg agttgctttc
     6541 atttatcctg gagaaatctc agcaagttta caaaattata aacaaaaact caaagagaaa
     6601 tcacaatcaa agaattttca aaaaatagat gaaacagtac catcaaatat agattcgctt
     6661 gattttggtt atagtattga gggaaaatct gattttaaac cgcttagagt ttataacgat
     6721 ggcgtaaaaa cttatatcca aatgcctaaa aatatgaaat tttatgaagc tcctgctctt
     6781 atgattttag acaaaaatga taataaagag atagtaaatt ataggctaaa aatagatact
     6841 tttatagttg atagattatt taataaagca cttttaatct ctggcgttga tgataaaggt
     6901 attcttatta aaaaaatgag taataaaata aaccaagaaa tagtcaataa tgtgctttat
     6961 gatttatctc ttaaaaatga agaaaagggt aattaaatga gattattatt ttttacaatt
     7021 ctaactttta tttttattgg ttgtacgcca aaagctggac caaattattt tcattcaata
     7081 aataatgtac caaaagatat tcaaatcaca aatttaaata ttattgcaga tgatatgatt
     7141 gactttatta gccatcataa aacaccaaac aatactactt tctatcttta tacagaggat
     7201 aaagatagaa gcttttttga ttatctaagt aataaatttc gccaaaaagg ttatgcaatt
     7261 acagaaaatc atgatttaaa aaatctaact tttctaagct acacaataca aaaaacaggc
     7321 aactttttac tagtcacata taattttaat gagagtaaga ttaatagaat ttacactatt
     7381 gaaaataata aaattacctc tagtggctct attagcactt ttaattttaa ttaggataaa
     7441 aatatgagtg ataaaaattt actagaaatt tgcacttctc ctgaaaaatt aagtaacacc
     7501 ggcaataaaa gattatcaaa agtccctata ttaataattg caataattgt tattttggtg
     7561 ctttttgctg tattttatac tgcaaatgat agagcaaaaa aacaagctgc caaacaaact
     7621 ggtgagcagc aagaagaaaa agcagtttca acaactaata aagatatcaa tagcatgatc
     7681 tcgtctttag aggcacaagg aattgataca aaaactcaaa aaaatataga cttacctgta
     7741 aagaatgtag cacctgagtt gaaaaatgat aatatacagc ctttagcaga atataaacct
     7801 attcctacat taaatacgca gcctaaaact gaaatagatg aaagagagat aaggttaaaa
     7861 caagatatga gattaaaggc tcttgcttca aaaactggaa ttgaagtaag aaactctaac
     7921 tctatccaac cacaaactaa agatagtata tatcaagagc ctataaactt gcaaaatgag
     7981 ccaaatttac aaaatataaa taactcagga gacaataatg ataaattctt atctaaactc
     8041 agaaataatg gctatttaga acaagttaaa caaaaaccta ttagtgcgta tgaaataaaa
     8101 gcaggttgga atataccagc agttttaata acaggagtaa attcagagtt gccaggtcaa
     8161 attttagctc aaataacaca aaatgtttat gatactgcaa caggcaaata tctactgatt
     8221 ccacaaggca caaaagtagt aggtgattat tcaaacaatg taatatatgg tcaatcaaga
     8281 cttcttgtag cttggaataa gataattttt ccaaatggcg atactttaaa tatcggaaat
     8341 atgcaaggtg ctagtatgga tggatatact ggatttgaag atcaagtaga taatcactat
     8401 tttagaattt ttggatctgc atttttactt tcaagcataa ctgcaggtat tgcgttatct
     8461 gacaactcac aaggaaatca aacagaaacc gcaagagata aagcaatagg tcaagcgata
     8521 caacaaatgg gccaagtagc aagtaaaatg ataagaaaga atatgaatat atctcctact
     8581 ctaattattc gccctggtta taaatttaat atctttgtta ctaaggatat agttcttgag
     8641 cctttggagt taaaacaatg agtttatata aaaaagccac aggtcacctt atcataaacc
     8701 ctgcaaaagc agggctaggc ttagtaagcc ttgacagcaa agatacaaat gagtataatt
     8761 gcaacaacga tagggtgagt aactatcatt taaaagctcc tttttggagt ttaaatttag
     8821 ccacaggggt tgagcctgtg gctagaaccc cgcgaaatta tatccaaaaa ttctttttct
     8881 actctacttt gttttttatt tcaaatattt ttggcaatga aatagattta tcattaatag
     8941 agcaatgcaa aaatccaaat gttgatactg aaataattaa acaaatcatc aaagttgaaa
     9001 gcaactataa acaatttgct atcaatgtta ataaggtagg ttcttttaac ttaaagacaa
     9061 aaaaagaagc aaaagcttta gccgattttt atattgcaaa aggctatagc gtagatatag
     9121 gcttaatgca atttaattct tcaaatctta aagaattttc atatgattta gatgatatct
     9181 tagagccgtg caacaatata aaagctggta gtgatatttt ttatttggcg tatgaaagca
     9241 cagatccaaa tttagataaa agcgaacgca taaacaaggc tttaagtata tataacacag
     9301 gtaatcagca acttggattt aaaaatggtt atgtagctaa atttgatatc caaaattcta
     9361 ataatataga aattcaaaaa atcgcacgac aatcaaatac aaaactttct ttggtgtttc
     9421 aaccatataa tttaaaggat aaaaaatgac aaataatata gtaattgcag gaagattggt
     9481 ggcagacgct gaactatttt ttacaaataa tggctctgct atttgtaatt ttactttggc
     9541 gaataataaa agatacaaag acatagaaaa aagcactttt atagaagcta gtatttttgg
     9601 caactatgca gaatctatga ataagtatct aaaaaaaggc gtatcaattg atgtaatagg
     9661 agagctggtt caagaaagct ggagcaaaga tggaaaaata tattataaac ataaaatcaa
     9721 agtcaaagag attgatttta gaacaccaaa agataatatt tcagaagcaa actttgaaaa
     9781 tgaa
//
LOCUS       DAPPKW010000068         9756 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.068, whole genome shotgun sequence.
ACCESSION   DAPPKW010000068 DAPPKW010000000
VERSION     DAPPKW010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9756)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9756)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9756
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.068"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            154..1377
                     /locus_tag="RPW04_001484"
     CDS             154..1377
                     /locus_tag="RPW04_001484"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDX6295573.1"
                     /translation="MQKKDVKKVVLAYSGGLDTSIILKWLQDEYKCEVVTFTADIGQG
                     EEVEPARKKAISLGIKPENIFIEDLREEFVKDFVFPMFRANAIYEGEYLLGTSIARPL
                     IAKRLVEIAAATKADCVSHGATGKGNDQVRFEIGAYALNPNIKVIAPWREWDLNSREK
                     LLAYAEKNGIDISKKKGKSPYSMDANLLHISYEGLVLEDPNHAPEEDMWRWSVSPKNA
                     PDESDIIEIEYKNGDPVAINAKSMKPHEILTELNRLGAKHGIGRLDIVENRYVGMKSR
                     GCYETPGGTIMLKAHRAIESITMDREAAHLKDELMPKYASLVYNGYWFSPERKMLQAA
                     IDESQKNVNGTVRVELYKGNVMVIGRDSKTDNLFNEAYCTFEEDSVYDQKDANGFIKL
                     NALRFIIAGKNGRKF"
     gene            1442..2506
                     /locus_tag="RPW04_001485"
     CDS             1442..2506
                     /locus_tag="RPW04_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDX6295574.1"
                     /translation="MKYKLDCKESFESSFLFWLTRFVKYKLNSLSNKELKDQAALASV
                     NYALTKGVANIDELDGFVKKARNAGLTGINTYFNPLKKIYEVLKFYELTSLAVIDEEL
                     ISEVLASITGSLSDASKKNYRIAAINFFEFIGKQNEEDGKAHIFDIELKNWGGVSGNK
                     GQKLPEFMNEEEVKRFLNAIDETDFKMNSNRNKLIIKTIVFTGIRVSEALNLKRKDIS
                     EDGDLYILRIRGKGNKYRIVMIKKHLIDEHLQNIAINYINSEGYLFVNRNGEKLTQAY
                     VSRIVEQILFGAGIRKEKNGAHMLRHTFATMLYKKQKDLVLVQEALGHASLNTSRIYT
                     HFDSDKLKLAAKVAEDLNDN"
     gene            2658..3842
                     /locus_tag="RPW04_001486"
     CDS             2658..3842
                     /locus_tag="RPW04_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HDX6295575.1"
                     /translation="MFADTKLFYTCTVLIAIGIIFSLSLPAFTVLYYDYTSYHFFIRQ
                     FIVGTAGVFIIWSISRLNPDKPFLMGLTTFEFIGFFIFFSSFLLMVIMQFLPASLVPV
                     TGGAKRWIRLGGISLSPVEFFKIGFVFFLAWSFARRIDNNKKRLKDEFRLFLPYFVVF
                     GMAVFLIAIMQKDLGQVVVLTLALMILATFAGTSKKFFGILGLIGVIMVFLAIISQDH
                     RIRRFKSWWVTNQDFILSILPSNMAEFMRVSDSEEPYQISHSLNAIYHGGFFGVGLGN
                     GTFKLGFLSEVHTDFVLAGIAEEIGFVGISVITFLMIYTIYRIFKISSRSQNKVYHLF
                     ALGIGSIITMAFLMNAYGITSITPIKGIAVPFLSYGGSSILALCVGIGMVLMISKKAD
                     LS"
     gene            3839..4846
                     /locus_tag="RPW04_001487"
     CDS             3839..4846
                     /locus_tag="RPW04_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--N-acetylmuramyl-
                     (pentapeptide) pyrophosphoryl-undecaprenol
                     N-acetylglucosamine transferase"
                     /protein_id="HDX6295576.1"
                     /translation="MIAITGGGTGGHLAIAKALAIELKNRGENVIFIGSNSGQDRMWF
                     EHSDIFKFKYFFPSRGVVNKKGIHKLFALLNIIKLAFKCRCIFTEHNISSVISVGGYS
                     SAPASFGAVIFRKKLFIHEQNAIKGKLNSILKPFCKKFFSSYGTDTYDYPIDIKFFNT
                     ARVRNELKTILFLGGSQGASFINSLALNLALNLKNHNINIIHQCGAKELETTRSKYNE
                     MGVEAVVFDFSNEIEVYMQKSDLCISRAGASTLWELCANALPTIFIPYPYAASNHQFY
                     NAKFLLDSNLAKIYEQNGLDKNILFTDIMNLDINSISMGLRNIVSPNGAKIIIDKILK
                     Q"
     gene            5013..5327
                     /locus_tag="RPW04_001488"
     CDS             5013..5327
                     /locus_tag="RPW04_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDX6295577.1"
                     /translation="MTKAEFVGLVASKAGLTKKDTELALDGFLGSISEVLTKGDSVTF
                     VGFGTFGVTERAARTAKVPSTGKEIKVPAKKAVKFKVGKNLKDAVASAGCGSSKCSTK
                     KK"
     gene            5570..5983
                     /gene="exbB"
                     /locus_tag="RPW04_001489"
     CDS             5570..5983
                     /gene="exbB"
                     /locus_tag="RPW04_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HDX6295578.1"
                     /translation="MEYLKGNIDYIIISILVFMSFLVVWFSIERVLFYLKVDPKKYVS
                     KNLFEEDLTKNLTILYIIYTNAPYIGLLGTVAGIMITFYDMGMSGGIDTKSIMIGLSL
                     ALKATALGLIVAIPTLIIYNGFIRKVDVFLNRYES"
     gene            5986..6372
                     /gene="exbD"
                     /locus_tag="RPW04_001490"
     CDS             5986..6372
                     /gene="exbD"
                     /locus_tag="RPW04_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HDX6295579.1"
                     /translation="MRLAKRDGLNIVPFIDIMLVLLAIVLSISTFIAEGNIKVDLPKA
                     QSATNSDESARVIIAIDKNSNIFIDDKLVLENEIAYKISNISPETLIILRSDKSSKFE
                     SFIKVIDALKSQNHEKFAISAKVSNE"
     gene            6365..7114
                     /locus_tag="RPW04_001491"
     CDS             6365..7114
                     /locus_tag="RPW04_001491"
                     /inference="COORDINATES: protein motif:HMM:NF024503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDX6295580.1"
                     /translation="MNSFIGFFISLLLHAGLIFGFILLNAKDSADQIQNEQLLKLTFS
                     NLNSLEDIPKPYEEVSEPIIEEKKEVDQAPQKKIIEKKIEQIYTKKIIKHTKPDKKQE
                     QTPKKQIVQNIETKQMPGIDPNLKSITQNSIEQKIFDQNTNQNKIEQQPKNTVNENMI
                     IGTKIRNIIANYARKNYPNSARRKRQTGIVKVSFMYKASGEVTNVKIDHSSTYMVLDE
                     AVLTAIQKTKSKFPSIKNDTNFQIEVEFSLS"
     gene            7152..7397
                     /locus_tag="RPW04_001492"
     CDS             7152..7397
                     /locus_tag="RPW04_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HDX6295581.1"
                     /translation="MRIDKFLNTVNIAKRRAISEDMCKSGVISINDKLAKPSKEVKVG
                     DKITIKFLAREVSYMVISLPTLKTIPKSEQEKYVKEI"
     gene            7381..7782
                     /gene="tsaE"
                     /locus_tag="RPW04_001493"
     CDS             7381..7782
                     /gene="tsaE"
                     /locus_tag="RPW04_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDX6295582.1"
                     /translation="MLKRFELGVDELDLIVKELPKSGVIVLQGDLASGKTTLVKSIVK
                     SAGINENVSSPTFSVMQNYGNIYHYDIYQNGFESIKKNGLFENFFEDGLHIVEWGDEN
                     LINMLGKYEIKVCVVKISVLNDKRIYEVDFA"
     gene            7775..8503
                     /gene="lptB"
                     /locus_tag="RPW04_001494"
     CDS             7775..8503
                     /gene="lptB"
                     /locus_tag="RPW04_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HDX6295583.1"
                     /translation="MHKLEVKNLEKTIKKTRIINGISLEVSSGEVVGLLGPNGAGKTT
                     TFYMICGLIAPSKGHIFLDSKDISSTPLHKRARLGIGYLPQESSVFKDLSVEENLSLA
                     AEIFYTDKKIIDTKVNEMLNLLNIEPIRQRKGLSLSGGERRRCEIARSLMIMPKFLLL
                     DEPFAGVDPIAVADIQGIINDLKKLNIGVLITDHNVRETLAICDRAYVIKNGSLLASG
                     SSNEVANNKLVRTHYLGEEFRLLD"
     gene            8503..9741
                     /locus_tag="RPW04_001495"
     CDS             8503..9741
                     /locus_tag="RPW04_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HDX6295584.1"
                     /translation="MKLAQKVTQKAKLNQTLRNWLPILQASSDELKDTLEPFIKDNPF
                     AALEITPKKHTKNFYGDLYKNSISDTIESSSIYKESLYEKLYSQINSPLFPTQKSIEI
                     ANLIVECINNEGYFEWDDHKFIKFEKSEVERIRLRFAYLEPTGVGALDYKESFIFQLD
                     DIDCDDKIYTLVQTIINDFENLSRYTKQKYYEDAIKIIKKFKNPPAIEYLEDNSQIIP
                     DIFVFNNDNGIEIKVNDEFYPDILIDTEGVDEKNEFVSSRVKEAKDLIDALEMRKSTL
                     YKIGLMIIEYQYDYFLGGDIKPMKLKDIAGDLGRNPSTISRAIQNKFLSCARGIVPLK
                     NFFAAAASEDISNAAIKDFVKNLIKNENHEKPLSDEAILSKIEKEFNIKLVRRTITKY
                     RKALNIASSNERKRLYIINA"
BASE COUNT         3549 a         1337 c         1797 g         3073 t
ORIGIN      
        1 tttaaattta aatttttgat tgagtattat ttttttaaat ttaacttaaa taatagatta
       61 aaaatgccat cttccttaaa ttttattttt tattacatat ttatctgttt ttagctaaaa
      121 tcagcaaaat ttttaaatca taaaggtcag cagatgcaaa agaaggatgt taaaaaagtt
      181 gttttggctt atagtggcgg acttgataca agtatcattt taaaatggct acaagacgag
      241 tataaatgtg aagtcgtgac tttcacagcc gatatcggtc aaggagaaga ggtcgagcca
      301 gctcgcaaaa aagctataag cttaggtata aaacctgaaa atatctttat agaggatttg
      361 cgtgaagagt ttgtaaaaga cttcgtattt cctatgttta gagcaaatgc tatatacgag
      421 ggcgaatatc ttttaggcac atctatcgct cgtcctctta tagcaaaacg tcttgttgag
      481 atagctgctg ccacaaaagc agactgcgta agtcatggtg ctactggtaa aggaaatgat
      541 caagttcgtt ttgagatagg agcttacgcc ttaaatccaa atatcaaagt tatcgctcct
      601 tggagagagt gggatctaaa tagccgtgaa aaacttctag catatgcaga gaaaaatggg
      661 atagatataa gcaagaaaaa aggtaaatct ccatattcta tggacgcgaa tttacttcat
      721 atctcttatg aaggacttgt tttagaagat ccaaatcacg ccccagaaga agatatgtgg
      781 agatggagcg tcagtccaaa aaatgctcct gatgagagcg atattatcga aatagagtat
      841 aaaaacggcg atcctgttgc gataaatgct aaatcaatga agcctcacga gatcttaaca
      901 gagctaaaca gacttggtgc aaaacatggg attgggcgcc ttgatatcgt agaaaaccgc
      961 tatgtgggta tgaaaagtag gggttgctat gaaactccag gaggcactat aatgctaaaa
     1021 gctcacagag ctatagagag cattactatg gatagagaag cagcacatct aaaagacgaa
     1081 cttatgccaa aatacgctag tttagtatat aacggatact ggttttcgcc tgagcgtaaa
     1141 atgcttcaag ctgcgataga cgagagccaa aagaatgtga atggtactgt tagagtcgag
     1201 ctttataaag gcaatgttat ggtcatcggt agagatagca agaccgataa tctatttaac
     1261 gaagcttact gcacgtttga agaagatagt gtttatgacc aaaaagacgc gaacggattt
     1321 ataaaactta acgctttacg ctttataatc gccggaaaaa acggaagaaa attttagtta
     1381 ttttagataa ataatcttaa acggttattt atctgctaaa attcggagta aatttaatac
     1441 tatgaaatat aaattagact gtaaagagag ttttgaaagc tcatttttgt tttggctgac
     1501 tcgttttgta aaatacaagc taaactcact ctcaaacaaa gagctcaaag atcaagctgc
     1561 tttggctagc gtgaattacg cacttacaaa aggagttgca aacatagatg agcttgatgg
     1621 ttttgtaaaa aaagccagaa acgctggact tactggtata aatacgtatt ttaatccgtt
     1681 aaaaaagatt tacgaagtgc ttaaatttta tgaactcaca agtttagctg tgatcgatga
     1741 agagcttata agcgaagttc tagcaagtat cacaggaagt ctcagtgatg ctagcaaaaa
     1801 aaattaccga atcgctgcga taaacttttt tgagtttata ggaaaacaaa acgaggaaga
     1861 cggtaaggcg catatttttg atatcgagct taaaaactgg ggtggagtta gtggaaataa
     1921 aggtcaaaaa cttcctgagt ttatgaatga agaagaggtt aaaaggtttt taaatgccat
     1981 tgatgagacg gattttaaaa tgaattcaaa tcgaaataaa ctaatcatca aaaccattgt
     2041 ttttaccgga attcgtgtaa gcgaggctct aaatttaaaa agaaaagata ttagtgaaga
     2101 cggcgatctt tatatcctta ggatacgagg caaaggcaat aaatatcgta ttgtgatgat
     2161 aaaaaaacat cttatagatg aacatctaca aaatatagca ataaactata taaatagcga
     2221 aggatatctt tttgtaaata gaaacggaga gaagctaact caagcttatg taagtcgcat
     2281 tgttgagcag attttatttg gtgctggtat cagaaaagag aaaaacggcg cgcatatgct
     2341 tcgtcatacg tttgcgacta tgctttacaa aaaacaaaaa gatctggttt tagttcaaga
     2401 agcccttggc cacgctagtt taaatacttc taggatatat actcacttcg atagtgataa
     2461 gctaaaatta gccgctaaag tcgcagaaga tctaaacgat aactaaattt aaaagtaaat
     2521 agtgcaataa aatagtttaa tcaaagatac gcagaaggaa ttttgataat ttgctaattt
     2581 catattaaaa attattttta ttgtattaaa agctaagttt aattataatc taaacctaaa
     2641 atttaaaaag gtttaacttg tttgccgata cgaaactatt ttatacatgt acggttttga
     2701 ttgccattgg aattattttc tctctatctt taccggcttt taccgtttta tattacgact
     2761 atactagcta tcactttttt attaggcaat ttatagtcgg aactgccgga gttttcatca
     2821 tttggtctat ctctaggcta aatccggata agccgttttt aatgggtctt actacgtttg
     2881 agttcatagg attttttata ttttttagct ctttcttact tatggttatt atgcagtttt
     2941 tgccagcttc tcttgtgccg gttaccggtg gagctaaaag atggataaga cttggaggta
     3001 tatctttgtc tcctgtcgag ttttttaaga taggatttgt attttttcta gcttggagtt
     3061 ttgctagaag aatagataat aacaaaaaac gtttaaaaga tgagtttaga ctgtttttac
     3121 cgtattttgt agtgtttgga atggctgtat ttttgatagc tattatgcaa aaagatcttg
     3181 ggcaagtagt tgttttaact ctagctttaa tgatacttgc cactttcgcc ggaactagta
     3241 agaagttttt tggaattttg ggattgatcg gtgttattat ggtgtttctt gctattatat
     3301 ctcaagacca cagaattaga cgttttaaat cttggtgggt gacgaatcaa gactttatat
     3361 tgtcgatttt accatcaaat atggctgagt ttatgagagt tagcgatagc gaagaacctt
     3421 atcagataag ccactcttta aatgcaattt atcatggagg attttttggc gttgggcttg
     3481 gaaacgggac atttaagcta ggatttttaa gtgaggttca taccgacttt gttttagcgg
     3541 gaattgctga agagatagga tttgttggga tatcggtcat aacttttttg atgatttata
     3601 ctatttatcg tatatttaag atatcttcaa gaagtcaaaa taaagtatat catctatttg
     3661 ctcttggtat aggttctata ataacaatgg cgtttttaat gaatgcttat ggaattacat
     3721 ctataactcc tataaaaggt atagcagttc catttttgag ctatggcgga agttctattt
     3781 tagcactttg tgtcggtata ggtatggttc ttatgattag caaaaaggcg gatttatcat
     3841 gatagctata acaggaggag gtacgggcgg tcatcttgct atagcaaaag ctttagcgat
     3901 agaactaaaa aaccgcggtg aaaatgtgat atttataggc tcaaatagcg gtcaagacag
     3961 aatgtggttt gagcatagcg atatatttaa atttaaatat ttttttccta gtagaggcgt
     4021 agtaaataaa aaaggtattc ataaattgtt tgccttgctt aatataatta aattagcttt
     4081 taaatgccgc tgcattttta cggaacataa tatctcatct gtgataagcg tcggcggata
     4141 tagctccgct ccagcttctt ttggggcggt tatatttaga aaaaagctat ttatacatga
     4201 acaaaacgct ataaaaggta aattaaattc tattttaaaa ccattttgta agaaattttt
     4261 tagctcatac ggaacagata cctatgacta tcctatagat ataaaatttt ttaatacggc
     4321 tagagttaga aatgagttaa aaactatact ttttttaggc ggttctcagg gtgctagttt
     4381 tataaatagt ttagctttaa atttagcttt aaatttaaaa aatcataata ttaatatcat
     4441 acatcaatgc ggagcaaaag agttagaaac aaccagatcc aaatataacg aaatgggcgt
     4501 tgaagccgtt gtatttgatt ttagtaacga gatcgaagta tatatgcaaa aatccgattt
     4561 atgtataagc agagccggag caagtactct ttgggagctt tgcgcaaatg cacttcctac
     4621 tatatttata ccgtatcctt acgccgctag caatcatcaa ttttacaatg ctaagttttt
     4681 gctagatagt aatctagcta aaatttatga gcagaatgga ttagataaaa atatactatt
     4741 tacggatatt atgaatttag atataaatag tatttcaatg ggtttaagaa atatcgtttc
     4801 tccaaacggt gctaagataa ttatagataa aatcttaaaa caataacaat aaaaaatatt
     4861 aattaaactt ttttaacatt ttttatatat tttatatgta aatttaagct atttttagca
     4921 tattttcttt taaaaagtat ggaaaatact tgaataaagt taaaaaataa tgtacaatat
     4981 gctattttaa aattttaaat aaaggatttg aaatgacaaa ggcagaattt gtgggcttag
     5041 ttgcttctaa agctggactt acaaaaaaag acactgagct tgcacttgac ggtttccttg
     5101 gaagtataag cgaagtttta acaaaaggtg atagtgtaac ttttgtagga tttggtacat
     5161 ttggagtaac tgaaagagcc gctagaacag ccaaagttcc aagtacagga aaagaaataa
     5221 aagtacctgc taaaaaagct gttaaattta aagtaggtaa gaatcttaaa gatgcagttg
     5281 caagcgctgg ttgcggcagt tcaaaatgtt caactaaaaa gaaataattt aagccccttc
     5341 tgcaaagaag ggcttttatc cacatatttt ttaaaattta aaaactaaat tttaaattta
     5401 agcttctttc ctgtttgttt ttatatttat tattttttct atatcaataa aatattttaa
     5461 tattttatat atcaatgttt attttgtcaa ttttgtaata aatttgtgac tcaaatttat
     5521 aaataaagtg tgctataata tatattttat tttgctttag ggaggatgta tggagtattt
     5581 aaaaggaaat attgattata ttattatatc tattcttgtt tttatgagtt ttttagtggt
     5641 ttggttcagc attgaaagag tgctttttta tctaaaggtt gatcctaaaa aatacgtcag
     5701 caaaaatctc tttgaagagg accttacaaa aaatcttacg atactctata tcatctacac
     5761 gaatgcacct tatataggac ttttaggtac tgtggcaggc attatgataa cattttacga
     5821 tatgggtatg agcggaggaa tcgatactaa gtctataatg ataggtttat ctttagcact
     5881 taaagctact gctttaggac ttatagttgc tatacctaca cttataattt ataatggatt
     5941 tataagaaaa gtagatgttt ttttaaacag atatgagagc tagatatgag acttgctaaa
     6001 agagacggat taaatatagt tccttttata gatattatgc ttgttttgct cgctattgtt
     6061 cttagtattt ctacttttat tgccgaagga aatattaaag tcgatttgcc aaaagctcaa
     6121 agtgctacaa atagcgatga aagtgcaaga gtgataatag ctatcgataa aaattctaat
     6181 atatttatag atgataaact tgttttagaa aatgagatcg catataaaat atcaaatatc
     6241 agtccagaaa ctttaattat attaagaagc gataaaagta gtaaatttga gtctttcatt
     6301 aaggttattg atgcattaaa aagtcaaaat catgagaaat ttgctatatc tgctaaggta
     6361 agcaatgaat agttttattg gattttttat atctttgttg ctgcatgcgg ggttaatttt
     6421 cggatttatt ttgctaaacg cgaaagactc tgcagatcag atccaaaacg agcaactttt
     6481 aaaactcact ttctcaaatt taaatagttt agaagatata ccaaaaccat atgaagaagt
     6541 ttccgaacct attatagaag agaaaaaaga ggttgatcaa gcgcctcaaa aaaagataat
     6601 agaaaaaaag atagaacaaa tctatactaa aaagataatc aagcatacaa aacccgataa
     6661 aaaacaagaa caaactccta aaaaacagat tgttcaaaac attgaaacaa agcagatgcc
     6721 aggcatagat ccgaatttaa aaagtattac tcaaaatagc attgagcaaa aaatatttga
     6781 tcaaaatacc aatcaaaata aaatagaaca gcagccaaaa aacaccgtaa acgaaaatat
     6841 gattatagga acaaaaataa gaaatattat agcaaactat gctagaaaaa attaccctaa
     6901 ctctgcaagg agaaaaagac aaactggaat tgtaaaagtt tcgtttatgt ataaagctag
     6961 cggagaagta actaacgtaa aaatagacca tagctcgacg tatatggttt tagatgaagc
     7021 tgttttaact gctatacaaa agacaaaatc caaatttcca tctatcaaaa atgatacgaa
     7081 tttccaaatt gaagttgagt ttagtttaag ctgaaacaaa agttcagcca aaattggcta
     7141 gaattatata catgagaata gataaatttt taaataccgt taatatcgcc aaacgccgcg
     7201 ctatcagcga agatatgtgc aaaagcggag ttattagcat aaatgataag cttgctaaac
     7261 ctagcaaaga agtcaaagta ggcgataaaa taactataaa gtttcttgct agagaagtaa
     7321 gctatatggt catttcgctt cctactttaa aaaccatacc aaaaagcgag caagagaagt
     7381 atgttaaaga gatttgagtt aggcgtagat gagcttgatt tgatagttaa agagcttccg
     7441 aaatccggcg ttatagtact tcaaggagat cttgcaagcg gtaaaacaac tcttgtaaaa
     7501 tccatcgtaa aatctgctgg tataaatgaa aatgtttcat cgccgacttt tagcgtgatg
     7561 caaaattatg gtaatattta tcattatgat atatatcaaa acggttttga gtcgattaaa
     7621 aaaaacggtt tgtttgaaaa tttctttgag gatgggcttc acatagttga atggggagat
     7681 gaaaatctta ttaatatgct tggcaaatac gagataaaag tttgcgttgt aaaaatatct
     7741 gttttaaatg ataaacgtat atacgaggtg gattttgcat aaacttgaag taaaaaattt
     7801 agaaaaaact ataaaaaaaa ctagaattat aaatggtata tcgcttgaag ttagcagcgg
     7861 cgaagtggtt ggtttgcttg gtccaaacgg agctggtaaa acaacaactt tttatatgat
     7921 ttgcggactt atagctccta gcaagggtca tatttttcta gattctaaag atatatcatc
     7981 tactccttta cacaaaagag caaggcttgg tataggttac ttgcctcaag aaagtagcgt
     8041 ttttaaagat ttgagcgttg aagaaaactt aagtttagca gctgaaattt tttatactga
     8101 taaaaaaatc atagatacaa aagtaaatga aatgcttaat ttgttaaata tagagcctat
     8161 tagacagaga aaaggtctta gtttgagcgg cggcgaaaga agaagatgcg agatagcaag
     8221 aagcttaatg ataatgccta agtttttgct tcttgatgag ccatttgccg gtgtggatcc
     8281 gatcgccgta gccgatatac aaggcatcat aaatgattta aaaaagttaa atataggagt
     8341 tttgataaca gatcacaacg taagagaaac tttagccatc tgcgatagag cgtacgtcat
     8401 taaaaacggt agtttattag ctagtggaag ctcaaatgaa gtggcaaata ataaacttgt
     8461 acgaacgcac tatcttggag aggaatttag gctactagac tgatgaaact agctcaaaaa
     8521 gttactcaaa aagctaagct caatcagact cttaggaact ggcttccgat acttcaagca
     8581 agcagcgatg agttaaaaga tactttggag ccttttataa aagacaatcc gtttgccgct
     8641 ttagaaataa ctcctaaaaa acacacgaaa aatttttacg gcgatcttta taaaaattcc
     8701 ataagtgata ctatagaatc atctagtatt tataaagaaa gtttgtatga aaagctatat
     8761 tctcagataa actctcctct ttttcctact caaaaatcaa tagaaattgc aaatttgata
     8821 gtagaatgta taaacaatga aggatatttt gaatgggatg atcataaatt tattaaattt
     8881 gaaaaaagtg aagttgagcg gataagacta agatttgcat atcttgagcc aaccggagta
     8941 ggggctttgg attataaaga gagctttata tttcagcttg acgatataga ctgcgacgat
     9001 aaaatttata ctcttgtaca aactatcatc aatgattttg aaaatttgag cagatataca
     9061 aaacaaaaat attatgaaga tgctataaag atcattaaaa aatttaaaaa tccgcccgct
     9121 atagagtatt tagaagataa tagtcagatt attccagata ttttcgtatt taataacgat
     9181 aacggcatag agataaaagt aaatgatgag ttttatccag atattcttat agatacagaa
     9241 ggagtcgatg aaaaaaacga gtttgtctct tcaagagtaa aagaagcaaa agatctcata
     9301 gatgctttag aaatgcgtaa atccacactt tataagatag gattaatgat aatagagtac
     9361 caatacgact attttttagg cggagatata aagcctatga agctaaaaga tatagcagga
     9421 gatttaggaa gaaatccatc tactatcagc agagccatac aaaataaatt tctaagctgt
     9481 gctcgcggta tagttcctct taaaaatttc tttgccgcag cggctagcga agatatatca
     9541 aatgcggcca taaaagattt tgttaaaaat cttataaaaa acgaaaatca cgaaaaacct
     9601 cttagcgatg aagccatact atctaagata gaaaaagagt ttaatatcaa gcttgttaga
     9661 agaacgataa caaaatacag aaaagctcta aatatagcta gttcaaatga gagaaaacgt
     9721 ctgtatatta taaatgctta atacaattta taatat
//
LOCUS       DAPPKW010000069         9619 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.069, whole genome shotgun sequence.
ACCESSION   DAPPKW010000069 DAPPKW010000000
VERSION     DAPPKW010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9619)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9619)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9619
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.069"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            106..840
                     /locus_tag="RPW04_001496"
     CDS             106..840
                     /locus_tag="RPW04_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009651383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDX6295585.1"
                     /translation="MTQEELDALMADGLDGDEQTSEVNDDILDESSQSSSNSNLETEQ
                     ETSKCKDKDEDSSYRVSSTSAWPPPPPTDDHKMVRQLDDVTKDSEEKATEMFDKLETI
                     NNFFMDAENVCNEAKDLATKNIEVFEKLLDKFPNVATFAQMLESNKDLEGKFEDIVGN
                     LQMGQDEVMMTMDMMQYQDIHRQKIERVINVMRALSKYMNSLFEGKVDDEKRVSSAVH
                     IEGDTTTENIVSNEDIEALIENLGKK"
     gene            837..2093
                     /locus_tag="RPW04_001497"
     CDS             837..2093
                     /locus_tag="RPW04_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HDX6295586.1"
                     /translation="MKKPELLSPAGNLTKLKIALNYGADAVYASVGSFSLRQRSAKEF
                     NLESFEEGVRLAHKHNAKFYATINGFPFNGQIEPLKRHIKTVSSFGVDAFIIATPGVM
                     SLAKEIAPDIEVHLSTQANVMNYLDASIYHQMGASRIVAAREMSLKDAVLIKEKIPSL
                     EIEIFCHGSMCFAYSGRCLISAVQSGRFSNRGSCANDCRFKYELYAKSEDNGALFRLE
                     EDESGTHIMNSKDLNLAVHIEKIIKTGAIDSLKIEGRTKSEYYAACTTRAYRMAIDDA
                     INGKFEPSVYEAELNTLKNRGFSDGYLIHKPYERSNTQNHISSIEEGTHQVHAISEDG
                     EYFKTKFKISPNEAYEIMAPIGSDINLGQNELGMVYENGGKYFVEFTKLISKKGKEFD
                     EIHSGNENEIKLPFKLPEFSFLRKEI"
     gene            2234..2731
                     /gene="purE"
                     /locus_tag="RPW04_001498"
     CDS             2234..2731
                     /gene="purE"
                     /locus_tag="RPW04_001498"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDX6295587.1"
                     /translation="MKFVSIIMGSKSDYEIVNEAAKILESFGVKFEMIISSAHRSPKR
                     THDYVIDADKRGATVFICAAGMAAHLAGAVAANTAKPVIGVPMGGSAVNGIDALYSTV
                     QMPAGMPVATLAIGKAGAKNAAYLAMQILALNDESLSQKLLDDRTKQALMLEEDSKKI
                     EVLLG"
     gene            2743..3213
                     /locus_tag="RPW04_001499"
     CDS             2743..3213
                     /locus_tag="RPW04_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3972 domain-containing protein"
                     /protein_id="HDX6295588.1"
                     /translation="MKTYLEIDEFCKLVHLNRDVVDEMIERGVLKTKTENDTIYIEVN
                     EGTMSVVPTSLNEMNITSNPTLPGESFVEKTIGTILNLHEKVLDAKDETLEALRNENK
                     FLKEALYSMQDLYDEDRKTVETLTNQLKISQDEVEFLKRKYKLMWNKAVENFKS"
     gene            3260..4117
                     /gene="glyQ"
                     /locus_tag="RPW04_001500"
     CDS             3260..4117
                     /gene="glyQ"
                     /locus_tag="RPW04_001500"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HDX6295589.1"
                     /translation="MTFSEIILTLQTYWHEQGCIIVQPYDMPAGAGTYHQATFLRSLG
                     DKPWNVAYVAPSRRPTDGRYGENPNRLGSYYQFQVIMKPSPKNIQELYLKSLERLGLD
                     INKHDIRFVEDNWESPTLGAWGLGWEVWLDGMEVTQFTYFQQVGGIPCELVSAEVTYG
                     IERLAMYLQDKNNVYDIVWDERDGKIVTYGDVHKQSEYEFSKYNFEIADTAILFKHFE
                     DYGKECKAILEHGLALPAYDYCMLAAHTFNVLDARGAISVTQRQDFILKIRELAKGCA
                     LAYKESLQK"
     gene            4114..4836
                     /locus_tag="RPW04_001501"
     CDS             4114..4836
                     /locus_tag="RPW04_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014769885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDX6295590.1"
                     /translation="MKISEIYAILDSIAPFENQETWDNSGLIIGSMNSEFDQVVLSLD
                     LDTNIVNNAKEKTLFITHHPLIFKGLKRLELSKFPSNLINIMLKKDISLISMHTNFDL
                     HVLNKYVLSEVLGYRDFIEDGFILKFDVNKSFEEFANEIKTKLKISNLRVVKSNEFIK
                     TAAFCTGSGADLIGDFEADCFLSGDFKYHTALECYENSLSLIDIGHFESERYFGDSLA
                     AYLQKNGVFATITNSINPFEYR"
     gene            4854..5567
                     /locus_tag="RPW04_001502"
     CDS             4854..5567
                     /locus_tag="RPW04_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002941798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HDX6295591.1"
                     /translation="MNKYLEQLVNLSQIDQKIDSYAPRIENINKNLNVKKEEILSIDE
                     KVETIQTEIEELKSQISNTNSHIVEFGAKIKDIGKKSGSVKTEKEIKALNLEEDLAKD
                     QLEAANEEITRLERIIESKLNYENELKQKKIEISKTLSELENEVSEELSNIEKDRNEV
                     YTQKEDLLAKMNQKVLTFYEKIRKWAKNTAVVPVRKQACYGCFMKINDKTYANVIKSE
                     DIITCPHCGRILYKEENGE"
     gene            5564..6694
                     /gene="waaA"
                     /locus_tag="RPW04_001503"
     CDS             5564..6694
                     /gene="waaA"
                     /locus_tag="RPW04_001503"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009651402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HDX6295592.1"
                     /translation="MIYTFLSFVILILASPFLALLSFKSKFKNSIPARFFLKNSKKLP
                     VSNFHFHACSLGEVASIEPFFNSCESSRISVVTQTGFDRAKKFTNDLCFLPFECFLPF
                     WWSHCKVLVVFEAELWLNLFKIAKQNGSKTILLNARISDKSYKSYLRFKFYYQWIFTY
                     VDLVLAQSDTDKIRLESLGAKNVKVIGNIKSANLLKPTKIYQKPQKRVITIASSHENE
                     EKQILSLLNLKDNDMLFIAPRHPERFQKVGILVSEFASKNNLSYEKFSQNLGFKSDVV
                     LIDTLGELVNIYNISDIVVLCGSFEKGIGGHNPIEAAQFNCSIISGEFVYNQKPLFEA
                     VDGVVMSDYKSLNTALNSNLKKCSIKNRCDFNTVLQEIKSYL"
     gene            6704..7468
                     /locus_tag="RPW04_001504"
     CDS             6704..7468
                     /locus_tag="RPW04_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HDX6295593.1"
                     /translation="MKQEKAYKLLALQEGISNNEAKELIDSGLVSAGGKRLVLARGLL
                     NENTSFKVTKLAKPVMIYEDDNIVAVNKPPFITSEKVAEIFKFPLLNRLDKETSGVIL
                     LYKNEEFQKAAIKEFANNKVKKTYLAIVRGIVVDEFSVELPISTVKTKSGAFSKIDLS
                     RGKTAITHVSPLMVEGKKSLIKVGIETGRTHQIRCHLAYSGYGVIGDEKYAKNSSKRV
                     YLHSFETALLGYKFKALPDRSFCDFGFEISNGILNS"
     gene            complement(7526..>9619)
                     /locus_tag="RPW04_001505"
     CDS             complement(7526..>9619)
                     /locus_tag="RPW04_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDX6295594.1"
                     /translation="LKLGTKLVLIVGIIITIGIAILSYIVARQTSSNMTKNAEYIITN
                     DALKYAATIEGMMNEIIATTQSAHDVINDFFHRVPMNEIKLENIESILSNVFDSSLHA
                     NYAMLYLTNPPEQFKGINKYTTESGKFLILFRDEDTSKKGGIESMQASDTAINDSILK
                     KALIEGNPNGNRVFVGNVEKISFGSNSFIGINVALPIFNNDSKKPIGVIAFSLNFKEI
                     SNFLLDNKLDSFSGYTKAIIAKDGTIAVHDNSNIILKKIQDINPHAKALADAVAKNEF
                     KIFSNYTTSTGVSSYAVVAPFTTARDSSNWAIVTTAPIDSVFAPLYSLQKTIFVASLI
                     FLVVSLAFIYFYIKANLAMRLPILLNALDSFFKFINHESKEVQMIKIDANDELGAMGN
                     MINANIAKTRDSLIKDQEAVQQSVETAKEIEGGNLTARIVKDPANPQLIELKNVLNKM
                     LLVLQNKVGSNMNEINRVFNSYKSLDFTTNIANAKGEVEVTTNVLGDEIKEMLRSSLS
                     FAKDLAEQSKELRESMQKLTDGSRTQAHSLEQSAAAVEQISCSMQSISDRTVETTKQA
                     EDIKNIVGVIKDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTNNSLGE
                     IEVNVNILVQSVNDMSESIKEQTIGLGQINESIAQLESVTQTNVGIANTTNDITQNVN
                     TIADNILADVNKKKF"
BASE COUNT         3346 a         1382 c         1821 g         3070 t
ORIGIN      
        1 tatttttata aaaataggag ttgaaattta aaaaaaatgt tgcttgtaaa gcaattttta
       61 gaaattttaa gctacaatat gggaattaag ttttaggagt ttttgatgac gcaagaagag
      121 ttagatgctt tgatggctga tggtcttgat ggtgatgaac aaacgtctga ggtaaatgat
      181 gatattttag atgaatcttc tcagagtagt agtaattcaa atttagaaac agagcaagag
      241 acaagtaaat gtaaagataa agatgaagac agtagttata gagtatcatc tactagtgcg
      301 tggccaccgc ctcctcctac ggatgatcac aaaatggttc gtcaattaga tgatgtaaca
      361 aaagactctg aagaaaaagc tacagagatg tttgataaac tagaaactat aaataatttt
      421 tttatggacg ctgaaaatgt ttgtaatgaa gcaaaagatt tagctactaa aaatatagaa
      481 gtatttgaaa aacttcttga taaatttcca aacgtcgcaa catttgccca aatgctcgag
      541 tcaaataaag acttagaagg caaatttgaa gatatcgtag gcaatttgca aatgggtcaa
      601 gatgaagtga tgatgactat ggatatgatg cagtatcaag atattcatag acaaaaaata
      661 gaacgcgtta taaacgttat gagagcactt agtaagtata tgaatagcct atttgagggc
      721 aaagtcgatg atgagaaacg agttagctct gctgtgcata tagaaggcga tacaactact
      781 gaaaatatcg taagcaatga agatatagaa gctttaattg aaaatttagg caaaaagtga
      841 aaaaacccga gcttctgagt cctgctggaa atttaacaaa attaaaaata gcattaaatt
      901 acggtgcaga cgctgtatat gctagtgtag gcagcttttc tttacgccaa agaagtgcaa
      961 aagaatttaa tttagaaagc tttgaagagg gcgtgagact agctcataag cataatgcta
     1021 aattttacgc tactataaat ggatttcctt ttaacggtca aatagaaccg ttaaaaagac
     1081 atataaaaac ggtgtctagt tttggtgtag atgcatttat catagcaact ccgggagtta
     1141 tgagtttagc taaagagata gctcctgata tcgaagttca tttatcaact caagcaaatg
     1201 ttatgaacta tcttgatgct tctatctatc atcagatggg cgctagtcgt atagtagccg
     1261 cgcgtgaaat gagcttaaaa gacgcagttt taataaaaga aaaaattcct agtcttgaaa
     1321 tagaaatttt ttgtcacggc tctatgtgtt ttgcatactc tggacgttgt ttgatatctg
     1381 ctgtgcaaag cggacgtttt agtaaccgcg gaagttgtgc gaatgactgt aggttcaagt
     1441 atgaattgta tgctaaaagt gaagataacg gagctttatt tagattggaa gaagacgaga
     1501 gtggaactca tataatgaac tcaaaagatc taaatttagc cgttcatata gaaaagatta
     1561 taaaaaccgg agcgatcgat agcttaaaga tagaaggtcg cacaaaaagt gagtattacg
     1621 ctgcttgtac gacaagagct tacagaatgg ctatcgatga tgcgataaac ggtaaattcg
     1681 aaccatctgt atatgaagcc gagctcaata cattaaaaaa tcgcggattt agcgatggat
     1741 atttgataca taaaccttat gagagatcaa atactcaaaa tcatatttct agcatagaag
     1801 agggcactca tcaagttcat gctataagtg aagacggcga gtattttaaa accaaattta
     1861 aaatatcacc aaatgaagct tatgagataa tggcaccgat tgggtcagat ataaatttag
     1921 gtcaaaatga gcttggaatg gtttatgaaa atggtggtaa gtattttgtg gaatttacaa
     1981 aactcattag taaaaagggt aaagaatttg acgagatcca tagcggtaat gaaaatgaga
     2041 taaaacttcc gtttaagcta cctgagttta gttttttgcg aaaagagatc taaaaaattc
     2101 gttaagttaa agcgttaaaa tttgatttat aatgaagttt tgattaaatt tgataactaa
     2161 tttatataaa tttttataag tttgaaaata gcttaactcg gctgtaaaat agaaaataaa
     2221 aaggagtttt ggaatgaaat ttgttagtat tattatggga agtaaaagtg actatgaaat
     2281 agtaaatgaa gctgctaaaa ttttagagag tttcggtgtt aaatttgaga tgattatcag
     2341 ttcggctcat agaagtccta agcgtacgca tgattatgtt atagatgcag ataaaagggg
     2401 cgcgacggta ttcatctgcg ctgctggtat ggcagctcat ttagcaggtg cagtagctgc
     2461 aaatacagcc aaaccagtta tcggagtacc tatgggtggt tcagccgtaa atggtataga
     2521 cgctctttat tctactgttc agatgccagc tggtatgccg gttgcgactc ttgctatagg
     2581 caaagcagga gcaaaaaatg cagcttactt ggctatgcaa attctagcac taaatgatga
     2641 aagcttaagt caaaaattat tagacgatag aacaaaacaa gctttaatgc ttgaagagga
     2701 ttctaaaaaa atagaagttt tactaggata aaaaggagca aaatgaaaac ctatcttgaa
     2761 atcgacgagt tctgcaaact agttcatcta aaccgtgatg ttgtggatga aatgatcgaa
     2821 agaggagttc taaaaacaaa aaccgaaaac gatactatct atatagaagt gaatgaaggc
     2881 actatgagcg ttgtcccaac tagcttaaat gagatgaata ttacttcaaa tccaactctt
     2941 cctggggaaa gttttgtaga aaaaactata ggtacgattt taaatttgca tgaaaaagtt
     3001 ttggacgcca aagatgagac tttagaagct ttgcgtaatg aaaataaatt tctaaaagaa
     3061 gcgctttatt ctatgcaaga tttatatgat gaagatagaa aaaccgttga aactcttact
     3121 aatcagctta aaatttctca agatgaagtt gaatttctca aaaggaaata taaacttatg
     3181 tggaacaaag ctgtagaaaa ttttaaatct taagttattt aaatttaagc tactaaagtg
     3241 ataaaattaa aggaattata tgacatttag cgagataata cttactcttc aaacgtattg
     3301 gcatgagcaa ggctgcatta tagtccagcc ttacgatatg cctgctggcg caggaactta
     3361 ccatcaagca acatttttaa gaagtcttgg cgataaaccg tggaacgtag cttacgtagc
     3421 acctagccgc cgcccgactg atggtagata tggtgaaaat ccaaatcgtc ttgggagcta
     3481 ttatcagttt caagtgataa tgaaaccaag tccaaaaaat atacaagaac tctatctaaa
     3541 aagcttggag cgtttaggtc ttgatataaa taaacacgat atacgtttcg tagaagacaa
     3601 ctgggaaagc ccaactcttg gagcttgggg tcttggttgg gaagtttggt tagacggtat
     3661 ggaagtgacg caatttacgt attttcagca agtaggcgga attccttgcg agttagttag
     3721 tgctgaagta acttatggaa ttgagcgttt agctatgtat ttacaagata aaaataacgt
     3781 atatgatata gtttgggatg aaagagacgg taaaatcgtc acttacggtg atgttcataa
     3841 acaaagtgaa tatgagttta gcaaatacaa ctttgagatc gccgacactg ctatactttt
     3901 taaacatttt gaagattatg gtaaagagtg taaagcgata ctagaacacg gcttagccct
     3961 acctgcttat gactattgca tgctcgcggc tcatacattt aacgtgcttg atgcaagagg
     4021 agctataagt gttacgcagc gtcaagattt tatactaaaa attagagagt tagcaaaggg
     4081 ctgtgcttta gcttataaag agagcttgca aaagtgaaaa tatccgagat ttacgctatt
     4141 ttagatagta tcgctccatt tgaaaatcaa gaaacttggg ataattcggg acttattata
     4201 ggaagtatga acagtgagtt tgatcaagtt gttttaagcc ttgatttaga tacgaatata
     4261 gtaaataatg ctaaagaaaa aactcttttt ataactcatc atccgcttat ttttaagggt
     4321 ttaaagaggc ttgaattatc taaatttcca tcaaatttaa taaatataat gcttaaaaaa
     4381 gatataagtc ttatatctat gcatacaaat tttgatttgc atgtgttaaa taagtatgtt
     4441 ttgagcgaag ttttaggata tagggatttt atagaggacg gttttatact aaaatttgac
     4501 gtaaataaaa gttttgaaga gtttgcaaat gagataaaaa cgaaacttaa aatatcaaat
     4561 ttaagagttg taaaatcaaa tgaatttata aaaacagctg cattttgtac aggaagcgga
     4621 gcagatctaa taggtgattt tgaagccgac tgttttttaa gcggagattt taaataccat
     4681 acggctttag aatgttatga aaattctctt agtcttatag atatcggaca ttttgaaagt
     4741 gagcggtatt ttggggattc attggctgct tacttgcaaa aaaacggagt ttttgctaca
     4801 atcacaaatt caatcaatcc atttgaatat cgttaatcaa aaaaaggaca tatatgaaca
     4861 aatacctaga acagctagtt aatctatctc aaattgacca aaaaatagat agctatgcgc
     4921 cgcgtatcga gaatattaat aaaaacttaa acgttaaaaa agaggaaatc ttatctatag
     4981 atgagaaggt agaaactata caaacagaaa tagaagagtt aaaaagtcaa atttcaaata
     5041 caaactctca tatagttgag tttggtgcga aaataaaaga tatcggtaaa aaaagcggat
     5101 ctgtaaaaac tgaaaaagag ataaaggctc tgaatttaga agaagattta gcaaaagatc
     5161 aactagaagc ggcaaacgaa gagataacta gattggaaag gattatagag tcaaaactta
     5221 attatgaaaa tgagcttaag caaaaaaaaa tagagatatc taaaactctt agcgaacttg
     5281 aaaatgaagt ttctgaagag ctttcaaata tagaaaaaga tagaaatgaa gtatatactc
     5341 aaaaagagga tcttttagct aagatgaatc aaaaagtttt gactttttat gaaaaaattc
     5401 gtaaatgggc taaaaataca gccgtagttc ctgtaagaaa acaggcatgt tatggttgct
     5461 ttatgaaaat aaacgataaa acttatgcaa acgttataaa aagcgaagat ataattactt
     5521 gtccgcactg cggtcgtatt ttatacaaag aagaaaatgg cgagtgatct atacattttt
     5581 aagctttgtc attttgattt tagcatcgcc ttttctggct ttgctaagct ttaagtctaa
     5641 atttaaaaat agtattcctg ctagattttt tttaaaaaac agtaaaaaac ttccggtttc
     5701 aaatttccat ttccatgcat gcagtctagg tgaagttgct agtatagagc cgttttttaa
     5761 ttcttgcgag agttcgcgta tatctgttgt cacgcaaaca ggatttgata gggctaaaaa
     5821 gtttactaat gatctatgtt ttttaccatt tgaatgtttt ttgccgtttt ggtggtctca
     5881 ttgtaaagtg cttgtggttt ttgaggctga actctggcta aatttattta aaatagcaaa
     5941 acaaaatggt agcaaaacca tacttttaaa tgctaggatt agcgataaat cttataaatc
     6001 ttatttgaga tttaaatttt attatcaatg gatttttacc tatgtggatt tggtattggc
     6061 tcaaagcgat actgataaaa ttcgccttga gagtcttggc gcaaagaacg taaaagtgat
     6121 aggaaatata aagtctgcaa acttactaaa accaactaaa atatatcaaa aacctcaaaa
     6181 aagagttatt actatagcta gtagtcatga aaacgaggag aagcagatac tctctttatt
     6241 gaatttaaaa gataacgata tgctttttat agctcctcgt catcctgaga gatttcaaaa
     6301 agtaggtatt ttagtgagtg aatttgccag caaaaacaat ttgagttatg aaaaatttag
     6361 ccaaaactta ggctttaaaa gcgatgttgt gcttatcgat actttaggag aacttgtaaa
     6421 tatctataat atcagtgata tagtagtgct ttgtggtagt tttgaaaaag gtatcggcgg
     6481 acataatcct atagaagcgg ctcagtttaa ttgttctata ataagcggtg agtttgttta
     6541 taatcaaaag ccgctatttg aagcggtaga tggcgtggtg atgagcgatt ataagagttt
     6601 aaatacggct ctaaactcaa atttaaaaaa atgtagtata aaaaatagat gcgattttaa
     6661 cacagtatta caagagataa aaagctactt ataagaggta aaaatgaaac aagaaaaagc
     6721 atataaactt cttgctttgc aagaaggtat ttcaaacaat gaagcaaaag agttgataga
     6781 ttcaggtctt gtgagtgcag gcggcaaaag actcgtgctc gcaagaggac ttttaaacga
     6841 aaacacctct tttaaagtca caaaactcgc aaagccggtt atgatttatg aagacgacaa
     6901 tatcgtagct gtaaataaac cgccttttat aacgagtgaa aaagtagcag aaatatttaa
     6961 atttccgctt ttaaatagac tcgataaaga gactagcggc gtgattttgt tatataaaaa
     7021 tgaagagttt caaaaagcag ctataaaaga atttgccaat aacaaagtaa aaaaaacata
     7081 tcttgctata gttagaggaa tagtagtaga tgaatttagc gtagaacttc ctataagtac
     7141 agtaaaaaca aagtctggag cattttctaa aatagattta agtcgtggaa aaacagctat
     7201 aactcatgta agtcctctta tggtagaggg taaaaaatca ctcataaaag tcggtataga
     7261 gaccggaaga actcaccaga taagatgtca tttagcttac tccggttacg gcgtgatagg
     7321 tgatgaaaaa tatgctaaaa atagctcaaa aagagtatat ttgcatagtt ttgaaactgc
     7381 tcttttaggt tataaattta aagctttgcc cgatagaagt ttttgtgatt ttggatttga
     7441 aatttctaat ggaattttaa actcatagtt tttaaaataa atttataaaa agatactcca
     7501 aataatttcg gagtatctta aatttttaga atttcttttt atttacgtcc gctaatatat
     7561 tatcggctat ggtatttacg ttttgtgtaa tatcgttagt agtatttgca attccgacat
     7621 ttgtttgagt tacgctttct aactgagcta tagattcatt gatttgtcca agacctatag
     7681 tttgctcttt tatagattca ctcatatcat ttacactttg tactaagata tttacattga
     7741 cttcaatttc gcctaaagag ttatttgttc tctcagctag ttttctaact tcatccgcaa
     7801 caaccgcaaa tccacgtccg tgttctcctg cacgcgccgc ctctatagct gcgtttagcg
     7861 caagaagatt tgtttgatct gcgatatctt ttatcacgcc cacgatattt ttgatatctt
     7921 cggcttgttt tgtagtttca acagttctat cgctgatact ttgcatagag cagcttattt
     7981 gttctaccgc ggctgcggat tgctcaagag aatgtgcttg tgtgcgcgat ccgtctgtta
     8041 atttttgcat agattctcta agctctttgc tttgctcggc tagatctttg gcaaaactta
     8101 aactagatct tagcatttct tttatctcat ctcctaagac attagtggtt acttctactt
     8161 ctccttttgc gtttgcaata tttgttgtaa aatcaagaga tttataagag ttaaatacgc
     8221 gatttatctc attcatattg cttcctactt tattttgaag cactaacaac attttgttta
     8281 atacgttttt gagttcgatt aactgcggat ttgcaggatc ttttactatc cttgcggtaa
     8341 gatttccacc ttctatttct tttgccgttt ctactgattg ttgtactgct tcttgatctt
     8401 ttattaaact atctcttgtt tttgctatat ttgcattgat catatttccc atagctccta
     8461 gctcatcgtt tgcatcgatt ttgatcattt gtacttcttt gctttcatga tttataaatt
     8521 taaagaacga gtctaaagca tttaataaaa ttggaagcct catagcaaga tttgctttga
     8581 tataaaagta gataaacgct aaagatacaa ctaaaaatat caatgacgcg acaaatatag
     8641 ttttttgtag actgtataaa ggagcaaata cagaatctat cggcgctgtg gttacaattg
     8701 cccagttgct agagtctctt gctgtagtaa acggagcgac cacggcgtaa ctacttactc
     8761 ctgttgaagt tgtataattt gagaatatct taaattcatt tttagcaact gcatctgcca
     8821 atgctttagc atgaggattg atatcttgaa tcttttttaa tattatatta gagttatcat
     8881 gcactgctat tgtaccatct tttgctataa tggcttttgt ataaccgcta aatgaatcta
     8941 atttattatc taaaagaaaa tttgaaatct ctttaaaatt aagtgaaaat gctatcactc
     9001 cgatcggttt tttactatca ttattaaaaa taggtaaagc tacgttaatt cctataaaac
     9061 tatttgatcc aaaagatatt ttttcgacat ttcctacaaa aactctattg ccattagggt
     9121 ttccttcaat taaggctttt tttaagattg agtcgttgat cgcagtatct gaggcttgca
     9181 tcgattctat gccgcctttt ttgcttgtgt cttcatcgcg gaataatatt agaaattttc
     9241 cgctttctgt agtatattta ttaatacctt taaactgctc tggaggattt gtgagatata
     9301 acatcgcata attcgcatga agactactgt caaatacgtt tgatagtatg ctctctatgt
     9361 tttcaagttt tatctcattc ataggaactc tatgaaaaaa gtcatttatt acgtcgtgag
     9421 cactttgagt agtggctatg atttcattca tcattccttc tatagtagct gcgtatttta
     9481 aagcatcgtt tgtgatgata tattcagcat tttttgtcat attactgcta gtttgcctag
     9541 cgacaatata gcttaaaatc gcaattccta tagtgatgat aataccgact ataagaacta
     9601 atttggttcc gagttttag
//
LOCUS       DAPPKW010000070         9497 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.070, whole genome shotgun sequence.
ACCESSION   DAPPKW010000070 DAPPKW010000000
VERSION     DAPPKW010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9497
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.070"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            111..935
                     /locus_tag="RPW04_001506"
     CDS             111..935
                     /locus_tag="RPW04_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295595.1"
                     /translation="MRDFLGFGIAGNFALHLEQAGEFKDFVDIKTEEKYAPKGIFPFY
                     SPKSSNHLKNYCFDNVNLVLPNESSLNVQAEPEIALKCEIEYENGSVKTIKPLAFMAF
                     NDASVRNDKNATKISQKKNFSSGSKGFGNEIVIDKFDKTGVCERYSLVSFLRSEDGFF
                     RYGECAKLSGYSYFYEKLLNWMKKIFNTQKDFAVLEDLSKILKQNGYKKDVIITIGAT
                     RYEPKGENRFLKRGDEIYIVAFDHNKHSLEDITELAKTDSDFSKFSDISVLKQVVK"
     gene            932..1678
                     /locus_tag="RPW04_001507"
     CDS             932..1678
                     /locus_tag="RPW04_001507"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDX6295596.1"
                     /translation="MKIYILGGGNMGTAMAYGLKNSGFDVIIVCRDKEKLANFKKIGF
                     GAEIYGKSYDIKDKNIILAVKPYALSSVSNLLSGEAEVCISVLARTGIEMLNSSIKAK
                     NYAVCLPNIAAKFNSSVTPFISDGDDNTIVEILNGFGKCVKLETKNELDAASVLAGCA
                     PAYLALVAEALSNAGVLEGLKKDDANFLVNGLFDGFAKLLKSSHPALIKESVCSPAGT
                     TIEGVAKLEECGVRHAFLQAVKASAKKQRS"
     gene            1679..2941
                     /locus_tag="RPW04_001508"
     CDS             1679..2941
                     /locus_tag="RPW04_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDX6295597.1"
                     /translation="MQKYNFNTVSDACVKCGKCKPNCTIFKISGDEVRSPRGFLDLLG
                     AYNRGELELDKNAKDIFESCFLCTNCVSECPSSLATDTMIENVRRDIALKFGIAWYKR
                     LFFWLLRHRKVMDICASLGYVFQSCAFKVNNGEMRPRMSFPMVKKERLLPTASKKSFL
                     NSHPEFINNGGEKAVGIFIGCMGNYAYIGIGEGLLKICKTLNLNAHLMKDQSCCAAPA
                     YFTGDFNTVEVLAKKNIMYFEKVLEKVDAIIIPEATCSAMIKVDYEHFFANNEEWRER
                     AKNVSKKIFLATEYFEKYTNLGEILSKIGLNSNKQTITYHDPCHAKKMQGVFREPRAL
                     LSKIYNIKEMNDTTSCCGFGGVTMQSEKYHLSRAAGLSRAETISATKAQCVSAECSAC
                     KMQLNNALHLRSSDMRCENPIELIAKVL"
     gene            complement(3005..4126)
                     /gene="pseC"
                     /locus_tag="RPW04_001509"
     CDS             complement(3005..4126)
                     /gene="pseC"
                     /locus_tag="RPW04_001509"
                     /EC_number="2.6.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011992725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine transaminase"
                     /protein_id="HDX6295598.1"
                     /translation="MMTYSRQSIDDDDIKAVSEALKSDIITCGKKVDEFEKALCDYTG
                     AKFAVAMNSATSALHAGYLAFNLESNDEVITTPITFAATANTALMCGAKVKFADILPN
                     GNIDPKSVEKLITPKTKVITPVDFGGLPVDIDALNLIAQKHGLKILDDASHALGSSIN
                     GKKVGTFADASVFSFHAIKPITTLEGGALLTDDEEIAAKARLIRSHGIIKKTAWNSDM
                     ITLGYNYRLSDVACALGASQMKKLDIFIAKRDEIAKFYDEAFKKSPYLSTIKIPKGVK
                     SSHHLYPVLLFRDFWCDKQSIYEELHAKGIGVQVHYKPTYKFSFYKNLYAEISLPNAE
                     DFYRAELSLPCHQLMSIEDAKFVVENLNEILVKYKGCKF"
     gene            complement(4134..4694)
                     /locus_tag="RPW04_001510"
     CDS             complement(4134..4694)
                     /locus_tag="RPW04_001510"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HDX6295599.1"
                     /translation="MGLKSDKWIREQSIENQMIEPFCEENIGKGVVSYGLSSYGYDIR
                     VGCEFKIFTNIGGTVVDPKNFDEKNVVDFIGDICIVPPNSFALARTVEYFKMPHDVLA
                     ICLGKSTYARCGIIVNVTPFEPGFNGHITIEISNTTPLPAKIYANEGIAQVLFLQGDE
                     PCETSYADKKGKYQDQEGITLPRILK"
     gene            4990..5442
                     /gene="accB"
                     /locus_tag="RPW04_001511"
     CDS             4990..5442
                     /gene="accB"
                     /locus_tag="RPW04_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDX6295600.1"
                     /translation="MTRDEIKELMTFFDETNINRIKIKDKEFEIELEKYEPEATPAPV
                     VCPPAPAPTPINVNVVNEKGSSSQNLSGDTINSPMVGTFYVAPSPGAAAFVKPGQTIR
                     KGDCIGIIEAMKIMNEIEAEFDCRIIKSLIADGQPVEFGMALFEVEKI"
     gene            5439..6776
                     /locus_tag="RPW04_001512"
     CDS             5439..6776
                     /locus_tag="RPW04_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDX6295601.1"
                     /translation="MREIKRILIANRGEIALRALRTIQEMGKEAIVIHSTADKDALYV
                     KYADASICIGNPRSTDSYLNIPAIITACEISEADAIFPGYGFLSENQNFVEICSKHNI
                     KFIGPSVAAMALMSDKSKAKQVMMRAGIPVVPGSDGSIQDIDAAKKLAREIGYPIIVK
                     AAAGGGGRGMRVVEREEDLEKSFWSAESEAMSAFGDGTMYMEKYISNPRHIEVQVLGD
                     EHGNVVHIGERDCSMQRRHQKLIEESPAVILDDKTRANLHETAVKATKAIGYAGAGTF
                     EFLYDQKDNKFYFIEMNTRLQVEHCVSEMCSGLDLIEWMIRIAQGEKLLSQDEIKLRG
                     HAIECRITAEDPKSFTPNPGKVTKYIAPGGRNVRMDSHIYEGYSVPPYYDSMIGKLIV
                     HDKDRNRAIAKMKVALDEMVIQGIKTTKDFHLHMMNNSDFINNLYDTNYLSKH"
     gene            complement(6815..7642)
                     /locus_tag="RPW04_001513"
     CDS             complement(6815..7642)
                     /locus_tag="RPW04_001513"
                     /inference="COORDINATES: protein motif:HMM:NF025010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HDX6295602.1"
                     /translation="MKKIVFLTVFLLGILHAEYVNGLVAIVENEPITDYEIQQVMTKM
                     NISPNDALSVLIRERLEDAQIRTLGISADNYEADEKIAALAQANGIDVTTFKNVIESR
                     GISSEDFKNDIKTGIKKEKLYARILNNPSQNITPENARRFYEANPKMFVQFEKISVTK
                     YLTNNRQSLNEISKNPMSVQPGVSIENVVLESKELNPQLRYILLNTKKGSFTPIFQTA
                     DGFEMFYVYSKEGSYLPDFNSIEKEVVAAMASQEQEIAVADYFNKLRVKANIEIIKR"
     gene            7716..9098
                     /locus_tag="RPW04_001514"
     CDS             7716..9098
                     /locus_tag="RPW04_001514"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDX6295603.1"
                     /translation="MLTTRFAPSPTGFLHVGGLRTALYSYLYARKNGGKFVLRIEDTD
                     LKRNSEEAVIAIREAFNWCGLDYDGEVTYQSKRFDIYKEYIKKLLDEGKAYKCYMTKV
                     ELDELRAAQEAKKERPKYDGRYRDFTGTPPAGIEPVIRIKAPLNGTIEFKDGIKGDVK
                     FNCADILDDFIIARSDGTPTYNFCVVIDDALMGITHVIRGDDHLSNTPKQIILYEALG
                     FNLPEFFHVAMINGSDGSKLSKRHGATDVMEYKSMGYLPEALLNFLVRLGWSHGDDEI
                     FSMSDMLKYFDPHDINKSASTYNLTKLDWLNAHYIKTLPYERLADDMKFFGIDFRAFD
                     KGELLLNSLRERSKTLVELKNSALNIINSPETYDEKAVAKFINTESKELLKEYAANLE
                     DKNISAKDCEDITIAFLEKRDKKLKDIAQPIRIAITGSAVSPSIFEVIEAIGIKELKY
                     RIAALLEKLD"
     gene            9233..>9497
                     /locus_tag="RPW04_001515"
     CDS             9233..>9497
                     /locus_tag="RPW04_001515"
                     /inference="COORDINATES: protein motif:HMM:NF024212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HDX6295604.1"
                     /translation="MVNYLGACLFFSSQAFSRISEEIAKEYFMPTTLSPSHAYLLHAI
                     VLSEGISPSKLASIMCLSPSTVTRLVDKLVYRGLVEREFIGKTS"
BASE COUNT         3117 a         1480 c         1846 g         3054 t
ORIGIN      
        1 acactgctta taaggaacat tgctatgtgc tttgatgagt atatggttaa atttaaaggt
       61 ataaaaaata gcttttcaaa gacagtgtaa ttttaaattt agggatgata atgagagatt
      121 ttttaggttt tgggatagcc ggaaattttg ctttgcattt agaacaagca ggcgagttta
      181 aggattttgt agatattaaa acagaagaaa agtacgctcc aaaaggtatt tttccatttt
      241 atagtccaaa atcctccaac catcttaaaa attactgttt cgataatgta aatttagttc
      301 ttccaaacga gtctagttta aatgttcaag cagagcctga aatagctctt aaatgtgaga
      361 tagagtacga aaatggtagt gtgaaaacca taaaaccgct tgcatttatg gcatttaacg
      421 atgcttctgt aagaaacgac aaaaacgcta caaaaatatc tcaaaagaaa aacttttcaa
      481 gcggctcaaa aggctttgga aatgagatag ttatagataa atttgataaa acaggagttt
      541 gcgaacgcta ctctttagta tcttttttgc gtagcgaaga tggatttttt agatatggag
      601 agtgtgctaa attaagcggt tatagctact tttatgaaaa attattaaac tggatgaaaa
      661 agatttttaa tacccaaaaa gattttgccg tacttgagga tttaagtaaa attttaaagc
      721 aaaacggata caaaaaagac gtcattatca ctattggagc tacaagatat gagcctaaag
      781 gtgaaaatcg ctttttaaaa cgaggagatg agatctatat agtggctttt gatcataata
      841 agcatagttt agaagatata accgagttag ccaaaacaga cagtgatttt tctaaattta
      901 gtgatatttc agttttaaaa caggttgtaa aatgaaaata tatattttag gtggtggaaa
      961 tatgggaacc gccatggctt atggactaaa aaatagcggc tttgacgtta ttatagtatg
     1021 tagagacaaa gaaaaacttg cgaattttaa aaaaatcgga tttggcgcag agatttatgg
     1081 caagagttat gatataaaag ataaaaatat aatacttgca gtaaagcctt acgctctatc
     1141 tagtgtttct aatttactta gcggcgaggc agaagtctgc ataagcgtac tagctagaac
     1201 cggtattgaa atgttaaata gttctataaa agctaaaaat tacgctgttt gcttgccaaa
     1261 tatcgcggct aagtttaatt ccagcgtaac tccgtttata agtgatggcg atgataatac
     1321 gatagtagaa atattaaatg gttttggaaa atgcgtaaag cttgaaacta aaaatgagct
     1381 agacgctgct agtgtgcttg cgggttgcgc tcctgcttat cttgcgctcg tagccgaagc
     1441 tttaagcaac gctggagttt tagaaggcct taaaaaagat gatgcaaatt ttcttgtgaa
     1501 cggacttttt gatggatttg ccaagctttt aaaaagttct catccggcac tgataaaaga
     1561 gtctgtttgt tctccggcag gaactaccat agaaggcgta gcaaaacttg aagaatgcgg
     1621 tgttagacac gcatttttac aagctgtaaa agcaagtgcg aaaaagcaaa gaagttaaat
     1681 gcaaaagtat aattttaata ccgtttcaga cgcatgcgtt aagtgtggta aatgtaaacc
     1741 aaattgcact attttcaaga ttagcggtga tgaagttaga agtcctcgtg gttttttgga
     1801 tcttcttgga gcttataata gaggtgagct tgaattagat aaaaatgcaa aagatatatt
     1861 tgaaagctgc tttttatgta caaattgcgt aagtgaatgt cctagtagcc ttgcaaccga
     1921 tactatgatt gaaaatgtaa ggcgggatat cgcgctcaaa tttggaatag catggtacaa
     1981 aagactgttt ttttggcttt taagacatag aaaagttatg gatatttgtg ctagtcttgg
     2041 ttatgttttt caaagctgcg cttttaaagt aaataacggt gaaatgcgcc ctagaatgag
     2101 ttttcctatg gttaaaaaag agcgtctttt accgactgct agtaaaaaga gctttttaaa
     2161 ttcgcatcct gagtttataa ataacggagg agaaaaagcc gttggaattt ttataggatg
     2221 tatgggaaat tatgcatata tcggtatcgg cgagggatta ttaaaaattt gtaaaacact
     2281 aaatttaaat gctcatttaa tgaaagatca aagttgctgt gcggctccgg cgtattttac
     2341 cggggatttt aacacggttg aggttttggc taaaaaaaat atcatgtact ttgaaaaggt
     2401 acttgaaaaa gtagatgcga tcattatccc tgaagccacc tgtagtgcta tgataaaagt
     2461 agattatgaa catttttttg caaataatga agagtggaga gagcgtgcaa aaaacgtgag
     2521 caaaaagata tttttggcta ccgagtattt tgagaaatat acgaatttgg gagaaatttt
     2581 aagtaaaata ggcttaaatt caaacaagca aactataact tatcacgatc cttgtcacgc
     2641 taaaaaaatg caaggagttt ttagagaacc aagagcgttg ctaagtaaaa tttataatat
     2701 caaagagatg aatgatacta caagttgctg cggatttggc ggtgtgacta tgcaaagtga
     2761 gaaatatcat cttagccgcg cggccggact tagtagagca gaaacgataa gtgcgactaa
     2821 agcgcaatgt gttagcgcag aatgcagtgc ttgtaaaatg cagctaaata atgcgcttca
     2881 tcttcgcagt tcggatatga gatgtgaaaa tcctatcgaa ctgatagcaa aggttctgta
     2941 aagaaagact aaatttactc aaattatcat ttaaatttga gtaaatttga tatcgaagca
     3001 gggattaaaa cttacaccct ttatacttta ctaaaatttc atttagattt tctaccacga
     3061 atttagcgtc ttctatactc attagttgat gacaaggcaa gcttagctca gctctataaa
     3121 aatcctccgc atttggcaaa cttatctctg cgtaaagatt tttgtaaaag ctaaatttat
     3181 aagtcggttt ataatgcact tgtacgccga taccttttgc atgaagttct tcgtaaatac
     3241 tctgtttatc gcaccaaaaa tctctaaaaa gcaagaccgg atagagatga tgagaacttt
     3301 ttacaccttt gggtattttt atagtgctta aatacggact ttttttaaat gcttcatcgt
     3361 aaaatttggc tatctcatca cgttttgcta taaaaatatc caactttttc atttgcgaag
     3421 cacctaaagc acacgcgaca tcgcttaaac ggtagttata accaagagtt atcatatctg
     3481 agttccaagc tgtttttttg ataattccgt gagagcggat caatctagcc ttagcggcga
     3541 tctcttcatc gtcggttaaa agcgcgccgc cctcaagcgt ggttatcggt ttgatagcat
     3601 ggaaactaaa tacgctagcg tctgcgaatg tgccgacttt tttaccattt atgctacttc
     3661 caagagcgtg agaagcatca tctagtatct taagaccgtg tttttgggct atcaaattta
     3721 atgcgtctat atctactgga agtccaccaa aatcaaccgg agttataact tttgtttttg
     3781 gagttatgag tttttctacg ctttttggat cgatatttcc atttggcaat atgtcggcaa
     3841 atttaacttt cgcaccgcac atcaaagccg tgtttgcagt agccgcaaac gtaataggag
     3901 tcgtgatgac ttcatcgtta ctttcaagat taaacgctag atatcctgcg tgtaaagcag
     3961 aagtagccga gttcatcgct actgcgaatt tagctccggt gtaatcacaa agcgcttttt
     4021 caaactcatc tactttctta ccgcaagtta tgatatcgct ttttaaagct tcactgactg
     4081 cttttatatc atcatcgtct atgctttgtc tgctgtaagt catcattttt cctttacttt
     4141 agtatgcgcg gtaaggttat gccttcttga tcttgatatt tacctttttt atcggcgtaa
     4201 cttgtttcac acggttcatc accttgtaaa aatagaactt gcgctatgcc ttcatttgcg
     4261 taaattttcg caggtagagg agtggtgttt gagatttcta tagtgatgtg gccgttaaat
     4321 cctggttcaa atggagtaac atttactatt attccgcatc ttgcgtatgt tgattttcca
     4381 agacagatcg ctagaacgtc gtgaggcatt ttgaagtatt caactgttct tgcaagtgca
     4441 aatgagtttg gcgggactat gcatatgtct ccgataaaat caactacgtt tttttcatcg
     4501 aagttttttg gatctacaac agtaccgcct atatttgtga aaattttaaa ctcacaaccg
     4561 actcttatat cgtatccgta actagaaagt ccgtagctaa cgacaccttt acctatattt
     4621 tcttcacaaa acggctctat catttggttt tctatactct gttcgcgtat ccatttatcg
     4681 ctttttagtc ccataattac tcctgattta aatttataaa ttatatcata ttgtcataaa
     4741 gatggattta aacatttatt aaatttttag gatatatttt ttaaatttat attttacaaa
     4801 tatataaaat tggattataa ttagattaaa taccgtaaaa agctataaat tatgtaactt
     4861 tttgaggatt tgtaattgtt ttattgtaat ttaattaaat ttgaattaga tattttttta
     4921 aatttgtacc aaatctttac ataaatttgc taaaatgcta tgttttgaat aatttatagg
     4981 agaattctta tgacaagaga tgaaattaaa gagcttatga ctttctttga tgagactaac
     5041 atcaatagaa ttaagataaa agataaagaa tttgagattg aacttgaaaa atatgaacca
     5101 gaagcaactc cggctccagt tgtttgtcct ccggcacctg ctccgactcc gataaacgtg
     5161 aatgtggtaa atgaaaaagg ttctagcagt caaaatttga gcggagatac tataaactct
     5221 cctatggtag gaacatttta tgtagctcca agccctggag cagcagcttt cgtaaaaccg
     5281 ggtcaaacta taagaaaagg tgattgcata ggtattatag aagctatgaa aattatgaat
     5341 gagatagaag ccgagtttga ctgtcgtatt ataaaatctc taatagcaga cggtcagcca
     5401 gtagagtttg gtatggcttt gttcgaggtt gaaaaaatat gagagaaata aaacgaattc
     5461 tcatcgcaaa tcgtggggaa atagctttaa gagctcttag aacaatacaa gaaatgggaa
     5521 aagaagccat agtaatacat tctaccgcag ataaagacgc gctttatgta aaatatgcag
     5581 acgcttctat ttgtatagga aatccaagaa gcaccgatag ttatttaaat ataccagcta
     5641 tcatcacagc atgcgaaatc agcgaagctg atgctatatt tccgggatat ggatttttga
     5701 gtgaaaatca aaattttgtt gaaatttgct ctaaacataa tatcaaattt ataggtccta
     5761 gcgtagcggc tatggctctt atgagcgata aaagcaaagc taagcaagtt atgatgagag
     5821 ctggaattcc agtagttcca ggaagtgatg gttccataca agacatagat gcggcaaaga
     5881 aactagctcg tgaaatcgga tatcctatta tagtgaaagc tgctgctggc ggaggcggtc
     5941 gcggaatgcg cgtggttgag cgtgaagagg atctagaaaa aagtttttgg tctgccgaga
     6001 gtgaggctat gagtgcattt ggcgatggta ctatgtatat ggaaaagtat atctcaaatc
     6061 cacgtcacat tgaagttcaa gtcttaggtg atgagcatgg aaatgtagtt catataggcg
     6121 aacgcgattg ttctatgcaa agacgtcatc aaaaacttat cgaagagagt cctgccgtaa
     6181 ttttagatga taaaactaga gctaatttgc atgaaaccgc agttaaagct actaaagcta
     6241 taggttacgc tggagctggg acattcgagt ttttgtacga ccaaaaagat aataaatttt
     6301 attttatcga aatgaatact agacttcaag tcgaacactg cgtaagtgag atgtgtagtg
     6361 ggctagatct tatagagtgg atgatacgta tcgctcaagg tgagaagttg cttagtcaag
     6421 atgagatcaa actaagagga catgctatag agtgtcgtat aacagccgaa gatccaaaaa
     6481 gctttactcc aaatccggga aaagtgacaa aatacatagc tcctggaggc agaaatgttc
     6541 gtatggatag tcatatttat gaaggttata gcgttccacc atactatgat agtatgatag
     6601 gaaaattaat cgttcatgat aaagatagaa acagagcaat agctaaaatg aaagtagctc
     6661 ttgatgaaat ggttatacag ggcattaaaa ccacaaaaga ttttcatctt catatgatga
     6721 ataatagcga ttttataaat aacctttatg atacgaatta tctatctaag cattaaaatt
     6781 taaatttggt atcaaatttt gataccaaat ttatctatct ttttataatt tctatgtttg
     6841 cttttactct tagtttatta aaataatcgg ctaccgctat ctcttgttct tgacttgcca
     6901 tagctgctac gacttctttt tctatactgt taaaatcagg cagataagat ccttcttttg
     6961 aatatacata aaacatctca aatccatctg ctgtttgaaa tataggcgtg aaagagccct
     7021 tttttgtgtt taaaagtata tatcgtaatt gtggatttaa ctcttttgac tctaatacca
     7081 cattttctat gcttactcct ggctgtacgc tcataggatt tttcgatatt tcattgaggc
     7141 tttgcctatt gtttgttaaa tattttgtaa cagatatttt ttcaaattgt acaaacattt
     7201 tcggatttgc ttcgtaaaat cttctagcat tctcaggagt tatattttga ctaggattat
     7261 ttagtattct agcgtatagt ttttcttttt taataccggt tttaatatcg tttttaaagt
     7321 cttcactgct aatgcctctt gactcgataa cgtttttaaa tgtggttacg tctatgccat
     7381 ttgcttgtgc taatgctgct atcttttcgt ctgcttcgta attatcggca cttatcccaa
     7441 gagttcgtat ctgtgcatct tctaatctct ctcttataag tacgcttaaa gcatcgtttg
     7501 gagatatatt catcttagtc atcacttgct gaatttcata gtctgttata ggctcatttt
     7561 ctactatggc aactagacca tttacgtact ctgcgtgtaa tataccgagt aaaaaaacag
     7621 ttagaaaaac gatttttttc ataaataaaa cctttattaa agcaaatttg agttaaaatt
     7681 atacccaaat ttaataaatt aggaataaaa cagttatgct tacaactaga tttgctccaa
     7741 gtccgactgg ttttttacat gtcggaggtc ttagaaccgc gctttatagc tatctttatg
     7801 ctagaaaaaa cggaggtaaa ttcgtacttc gtatcgaaga tacggatcta aaaagaaact
     7861 ctgaagaagc ggtaattgct ataagagaag catttaactg gtgcggacta gattatgatg
     7921 gtgaagtaac ttaccaatca aaaagatttg acatatataa agagtatata aagaagcttt
     7981 tagatgaagg caaagcatat aaatgttata tgacaaaagt agaacttgat gagctaagag
     8041 ccgcgcaaga agctaaaaaa gagcgtccaa aatatgatgg cagatatagg gattttaccg
     8101 gcactccgcc agcaggcatc gaaccagtta tccgtatcaa agcgcctctt aacggaacta
     8161 tagagtttaa agacggtata aaaggcgacg tgaagtttaa ctgcgccgat atacttgatg
     8221 attttatcat agcaagaagc gatggtacgc cgacttataa tttttgtgtg gtgatagatg
     8281 atgctttgat gggaattact catgttataa gaggagatga tcatcttagc aataccccaa
     8341 aacagatcat actttatgaa gcgctcggat ttaacttgcc tgaatttttt cacgtggcta
     8401 tgataaacgg aagtgatggt tcaaaactat ctaaaagaca cggcgcaacc gatgttatgg
     8461 agtataaaag tatgggttat ctccctgaag cgcttttgaa tttccttgta cgtttaggct
     8521 ggagccatgg cgatgatgag atcttttcta tgagtgatat gttaaaatac tttgatccgc
     8581 acgatataaa taagtctgct tctacgtata accttacaaa actcgattgg ctaaatgcgc
     8641 actatataaa aactctgcct tatgagcgtt tggctgatga tatgaagttt ttcggtatcg
     8701 attttagagc gtttgataaa ggagagctac ttttaaattc gcttagagag agaagtaaga
     8761 ctttagtgga gcttaaaaac tcagctttaa atattataaa ttcacccgaa acttacgatg
     8821 aaaaagctgt tgctaaattt ataaatactg aatcaaaaga gcttttaaaa gagtacgccg
     8881 ctaacctaga agataagaat atctcagcta aagattgtga agatattacc atagcatttt
     8941 tagaaaagcg cgataaaaag ctaaaagaca tagcgcagcc tattcgtatc gccataacag
     9001 gcagcgcagt tagtcctagt atatttgaag ttatagaggc gataggtata aaagagctaa
     9061 aatatagaat agccgctctt ttagaaaaat tagattaagc ttaaaattaa agatatattt
     9121 tgctaatata aatttagatt ttaaatttaa gtttggttct gatttctttg tttttaaaga
     9181 tatcaaattt aatatattcg tatattcaaa taaataaaaa agttggatta atatggtaaa
     9241 ttatctcggt gcttgtctgt tttttagctc tcaagccttt tcaagaattt ctgaagagat
     9301 tgcaaaagag tattttatgc cgacaactct ttcgccatct cacgcttatt tgctgcatgc
     9361 tatagttctt agcgaaggca taagtcctag caagttggct agtataatgt gtttgtctcc
     9421 atctaccgta acaagacttg ttgataaact agtttataga ggtcttgttg agcgtgaatt
     9481 tataggaaaa acttcga
//
LOCUS       DAPPKW010000071         9361 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.071, whole genome shotgun sequence.
ACCESSION   DAPPKW010000071 DAPPKW010000000
VERSION     DAPPKW010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9361)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9361)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9361
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.071"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..909)
                     /locus_tag="RPW04_001516"
     CDS             complement(<1..909)
                     /locus_tag="RPW04_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HDX6295605.1"
                     /translation="MKFSLDAHKLHHHLDRVLEFKQTGDCAPIYMEVSPCGSCNHRCL
                     FCAYDYIAYPNRKLDTDNFIKFTTEVAKAGLKSMLFAGEGEPLIHNDIDKMVAHAKQC
                     GIDCGMFSNAALLKADLAKKLLPNLTFLRFSFNAGDSQTYSKIHTSHKKSSDFEKVVE
                     NIKFANDYRKEQNLKVDLGSQFVLLKENKNSLINAVKTMKECGVDYISVKPFVLQNEN
                     QLYKNNSKFETDQLETLINEAKSYESDDFKVIFRQNAFFKYGQRDYSHCYGCSFITVL
                     NSAGDLASCLPYWDKKEFVYGNINEQS"
     gene            complement(906..1838)
                     /locus_tag="RPW04_001517"
     CDS             complement(906..1838)
                     /locus_tag="RPW04_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HDX6295606.1"
                     /translation="MQKITIPDHYNYIALFLTLSCNLKCPYCINLNENGASRKSVVRG
                     VIKPDIWLNFINRLDIKSDDLPLTLQGGEPTLYPYFYELVNGIDDKFKLDLLTNFMFD
                     EDEFIRRINPSKFTRDAKYAAIRVSYHPNQNDINTLIKKHDKMKDAGFYVGIYSVLTP
                     QNKSHIEEVMKKCKDLGIDFRVKEYLGFDGQKWHGSYKFPEAISGNVNKYCDCKTTEL
                     LISPAGLVYRCHSDLYEKRAEVADISDPNYKFEDIYRPCIVYGHCNPCDIKVKTNRFQ
                     NFGHTSVEIKNIRELNEKERILLENSDFKGALNL"
     gene            complement(1826..4048)
                     /locus_tag="RPW04_001518"
     CDS             complement(1826..4048)
                     /locus_tag="RPW04_001518"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295607.1"
                     /translation="MFKSKIDIDILVKKIASGDIPKLSRDELLELRNAFYDFVLNKND
                     LPPKEHLWLIKVFKDLNLEDKKEFENYIKTADNYLDSCDDINQKLLLVHLKTTCLILN
                     SKTKEAMEYYILSFALLNCSEIPNLANYLEFFEKYCKDISFELYYDVCKKLFDPDYYL
                     KLDNAQQRNILNNNLIIFWKFTNVFVNRQIIKIYDLMLKIFNYFVQNDKYEKAMHITL
                     SMIHFYSNTNQGGGNIQNDIIVPLESMYQRFLNHVNIPTYHTKRHTKKRIGFLKDRIV
                     ANSPYKVEYSLIKALMQNDDFRKKYQIYIYSFSTTEKALDDDYTVQELLNLGVKVEAP
                     SFEQFRAQGFYYSYLEKSLLIRDKIIRDEIDILIDFTGSNPLAEFLFVTRSAKKQIYW
                     SHGNTEYDIKSIDLKVSHFQPTSEYKIISVPMDNKFYNPPIDQQLIINERSKYPKDAF
                     ILGVISRLVKIDDDRYLHSISEILKQNPKAIYLACGDGGNINRIKAKLDEFGVLDRFY
                     FTGMINPHIYGHIIDLWLNTFPPHVQGESANEYMSKGGAILGYYEPQIFDIDDENIKQ
                     IKYDSSKLLVYIENIEDFDKQTEGYDEFISDPYYIILNDKPIKDSILKAKSIIGDKSA
                     YDVRVRIEDGKIIGYDGKFFIYKPFFKENAWYERDYEICTWILQNKDICLINENDHIY
                     GYFTAFNTNEYIKKATMLIKNQKVRAQLKKFNSVYLNACKEITSKNILKDFENIICKK
                     "
     gene            complement(4117..4563)
                     /locus_tag="RPW04_001519"
     CDS             complement(4117..4563)
                     /locus_tag="RPW04_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HDX6295608.1"
                     /translation="MFKFTLSCALLSSLCLAANIDIESPFVKATPPNAKTSAAFMVIK
                     NNTNKDVSLVSGNSNASKVFEIHTHLNENGMKKMVRIPKIDIPANSSVELKPGGLHIM
                     LIDINKPLEITDKVDLTLEFSDSSKIDLKDVEVKKLAPMMKPQGSM"
     gene            4689..5657
                     /locus_tag="RPW04_001520"
     CDS             4689..5657
                     /locus_tag="RPW04_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012001486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HDX6295609.1"
                     /translation="MKKFLIFVLCFLSFLYSKDLEKIYLESGIEAVQKAIEANLQSKD
                     YWQKHLSQMDLKYGYYDSDIFIVVVDKKAKNFYLNEYKDGKLDSKADHKVLTGLMGDK
                     LLEGDLKTPVGVYEITRRFVPEDTYYGPVAFNLSYPNLFDKLRDRTGGGIWIHGFPLN
                     GNIREDVYKTKGCVVMPNDLLLNLESILKDNGGMVLINESGILEAKNEDIALIFAELF
                     KWKEAWTNSDIDRYLSFYDKKFKRYDGVGFDKFKEMKKNIFSRKENKFIQFTKFSITP
                     YPTIDDENIFRVSFMEKYRASAYKFDGIKTLYVKLDGGKMKILVEQ"
     gene            5670..5930
                     /locus_tag="RPW04_001521"
     CDS             5670..5930
                     /locus_tag="RPW04_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295610.1"
                     /translation="MQNTDVTEEEKEFIKSQIEELLKARDGFFEVLDANVPKKGNTNV
                     FDFDACKDKSLKELYAKFYSYDYSIRKILPYIYKRFGVNFSV"
     gene            5923..6936
                     /locus_tag="RPW04_001522"
     CDS             5923..6936
                     /locus_tag="RPW04_001522"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDX6295611.1"
                     /translation="MSKIVLSKTAYIHNLTQISSKIGSKDRIIAVLKDDAYGHGAVLM
                     AGIASGFGIKWACVKSIDEAIEISPFFKNIIILSHIPNGKENDEFIYAINDLSGLDVI
                     KSGISVHLAIDTMMHRNGIGIYEIETAFNIAKNRSIRICGAYTHFRSSDEISGDYYVQ
                     KANFLKAKIKLKSLFKKNGVDKPMFHSHNSAAIERTNGFDDEFVRAGIVQFGYSQFDE
                     SLNLKKVLSLWADRISKRVLKAGQSVGYGGAFTAKKDINIATYDLGYGDGLLRYNGKG
                     DLHLANGEKILGKMSMDSFSCADSGDQICVFDDARVWAKFFDTISYDILVKLSSKIKR
                     VVV"
     gene            complement(6946..7812)
                     /gene="htpX"
                     /locus_tag="RPW04_001523"
     CDS             complement(6946..7812)
                     /gene="htpX"
                     /locus_tag="RPW04_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HDX6295612.1"
                     /translation="MELLKTVSLMVILMLLFISVGGYIGGLNGMIIAFLIALGLNFFS
                     YFYSDKLILKHYNAQLVEPSNTLYKIVSELCKKANIPIPKIYIISDNTPNAFATGRNP
                     HNSAVALTNGLLNLLDENEIKAVIAHELGHIRHYDILTGSIVAIFAGAIAILANFAHF
                     GVGLNKNENKANIVIVIILAIIMPLAATIIQMSISRSREFEADRFSANLTDPIYLVNA
                     LSKLEGYASKSVLKNADEQTAHMFIINPFSSVKSGISNLFRTHPSTKQRIDRLLNLKE
                     RSQSAAYKYFNS"
     gene            complement(7812..8126)
                     /locus_tag="RPW04_001524"
     CDS             complement(7812..8126)
                     /locus_tag="RPW04_001524"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295613.1"
                     /translation="MIVFGSEFVPYDEVVLEDFSGYSLQKKPDFLRVKSKKEAIFANA
                     NGVKFIVCDNLNFARQLQALANDYIFDSKIAVLICDDFELEAAIDARIDASIYKSVIR
                     GF"
     gene            complement(8123..8317)
                     /locus_tag="RPW04_001525"
     CDS             complement(8123..8317)
                     /locus_tag="RPW04_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295614.1"
                     /translation="MLGKIIIFALIIASIYFFILPKFRKNKTSNSSENFVECDKCNTF
                     VSINETVLRNGKYICKECLK"
     gene            complement(8311..8859)
                     /gene="rsmG"
                     /locus_tag="RPW04_001526"
     CDS             complement(8311..8859)
                     /gene="rsmG"
                     /locus_tag="RPW04_001526"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDX6295615.1"
                     /translation="MNLPDNFWNKVREFEIILKQFNKIHSLTNYRDIKPVVEDSMKPL
                     EFLDFNPKIVIDVGSVAGFPAIFLSLILNSSEFHLYEPIAKKSSFLSYVGAALNLKNI
                     TVHPSKIESCQKIKADLITSRALSKTLFLIEICRGFYDENTTFLLYKGDGAKEEISNL
                     KCKNSIISSGKRNYLFLKGVKC"
     gene            complement(8843..>9361)
                     /gene="ribA"
                     /locus_tag="RPW04_001527"
     CDS             complement(8843..>9361)
                     /gene="ribA"
                     /locus_tag="RPW04_001527"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HDX6295616.1"
                     /translation="KEGCCKEHLTIFSPNLDVTKTVNVRIHSECLTGDAIGSLKCDCR
                     DQLEASLKYINKHGGMVIYLRQEGRNIGLLNKVNAYALQDNGLDTIEANHQLGFKADE
                     RTYEIVDFILKDFGIKSINLLTNNPLKLASLTCVNIEKRIPIEIESNEFNKDYLKVKK
                     EQMGHMLDEFTR"
BASE COUNT         2967 a         1466 c         1507 g         3421 t
ORIGIN      
        1 actttgttca tttatatttc cataaacaaa ctctttttta tcccaatatg gcaagcaact
       61 agccaaatct ccagctgagt ttaacacggt tataaagctg catccgtagc agtgagagta
      121 gtctctttga ccgtatttaa aaaaagcgtt ttgcctaaaa atcactttaa aatcatcact
      181 ctcataactt ttagcttcat ttataagtgt ttcaagctga tctgtttcaa atttagagtt
      241 atttttatat agttgatttt cattttgtag cacaaacggt tttacgctaa tgtaatccac
      301 gccgcactct ttcatagttt ttactgcatt aataagagag tttttatttt cttttaaaag
      361 aacgaactga gatccaagat caactttcaa gttctgctct tttctgtaat cattcgcaaa
      421 tttgatattt tctaccactt tttcaaaatc acttgatttt ttgtgtgaag tatgaatttt
      481 agagtaagtt tgactatctc cggcgttaaa cgaaaacctt aaaaaagtta aattcggaag
      541 cagtttttta gccagatcgg cttttaaaag tgctgcgtta ctaaacattc cgcagtcgat
      601 gccgcactgt tttgcgtgag ccaccatttt atctatgtca ttatgtatca aaggctcgcc
      661 ttcacctgca aatagcatgg attttaaccc ggcttttgct acttctgtgg taaatttgat
      721 aaaattatcg gtatcgagtt ttctatttgg ataagctata taatcatacg cacaaaacag
      781 acatctgtga ttgcatgatc cgcacggact tacttccata taaatgggcg cacaatcccc
      841 tgtttgttta aattctaaaa ctctatctaa atggtggtgg agcttgtgtg cgtcgaggct
      901 aaatttcata aatttaaagc tcctttaaaa tcgctgtttt cgagtaaaat ccgctctttt
      961 tcgtttaatt ctctgatatt ttttatctca acagacgtat gaccgaaatt ctgaaatcta
     1021 tttgttttga ctttgatatc gcatggattg cagtgtccat aaactatgca aggtctgtaa
     1081 atatcttcaa atttatagtt tggatcactt atatctgcta cttcggctct tttttcatag
     1141 agatctgagt ggcagcgata tactagacct gctgggctga ttagtaattc tgttgttttg
     1201 caatcacagt atttattaac atttccgctt atagcttctg gaaatttata gcttccgtgc
     1261 cacttttgcc catcaaatcc aagatactct ttaactctaa aatcaattcc taaatctttg
     1321 cattttttca ttacttcttc tatatgagat ttattctgag gggttaaaac agagtaaatt
     1381 cctacgtaaa atcctgcatc tttcatctta tcatgttttt ttataagcgt atttatgtca
     1441 ttttgatttg ggtgatagct tactcttatg gctgcatatt tcgcatcgcg tgtaaatttt
     1501 gaaggattta tacgtcttat aaactcatcc tcgtcaaaca taaagtttgt aagcagatct
     1561 agtttaaatt tatcgtctat accatttaca agttcgtaaa agtacggata caaagttggt
     1621 tcgccgcctt gaagggtaag tggtaaatca tcacttttta tatctaagcg gtttatgaaa
     1681 tttagccaaa tatctggttt tataacgccc ctaacaacac tttttctact agctccgttt
     1741 tcatttaaat ttatacaata cggacatttt aagttgcaag acagtgttaa aaacagagct
     1801 atgtaattat aatgatctgg tatggttatt ttttgcatat tatattctca aaatccttaa
     1861 gtatattttt actagtaatc tctttacaag catttagata aaccgagttg aactttttta
     1921 actgagctct tactttttgg ttttttatta gcatagttgc tttttttatg tattcatttg
     1981 tattaaacgc cgtaaaatat ccatatatat ggtcgttttc atttatgaga caaatatctt
     2041 tattttgtaa tatccaagtg catatttcat aatccctctc ataccaagcg ttttctttga
     2101 aaaacggctt atatatgaaa aatttaccat cataccctat tatttttcca tcttctatac
     2161 gcactctaac atcatatgcc gatttatcgc ctattataga ttttgctttt aaaatgctat
     2221 cttttatcgg tttatcattt aaaattatat agtacggatc agagataaac tcatcatagc
     2281 cttcggtctg tttatcaaaa tcctctatgt tttctatata aactagcagc tttgagctgt
     2341 cgtatttgat ttgtttaatg ttttcatcat ctatatcaaa gatttgcggc tcataatatc
     2401 ctaatatagc accgcctttt gacatatact catttgcgct ttcgccttga acgtggggtg
     2461 gaaatgtatt tagccaaaga tctattatgt gaccataaat atgcggattt atcatccctg
     2521 taaagtaaaa tctatctaaa actccgaatt catctaattt tgcttttatt cgattgatat
     2581 ttccgccgtc tccacaagct aaatatatag cttttggatt ttgttttaaa atttcactta
     2641 ttgagtgaag ataacgatca tcgtctatct ttactagtct gctaattacg cctaaaatga
     2701 aagcatcttt tggatatttg cttcgttcat ttatgatcaa ttgctggtcg atagggggat
     2761 tgtagaattt attatccata ggcacgctta taattttata ttcgctagta ggctgaaagt
     2821 gactgacttt taaatcgatc gatttgatat cgtattctgt atttccatgt gaccagtata
     2881 tctgcttttt agcagatctt gttacaaata aaaactcagc cagaggattg ctcccggtaa
     2941 aatctatcaa aatatctatt tcgtctctta ttattttatc tctaatcaaa agtgattttt
     3001 ctaaatatga atagtaaaat ccttgagctc taaactgttc aaaagaagga gcttcgactt
     3061 tcacccctaa attcaaaagt tcttgaaccg tataatcatc gtctaaagct ttttcggtcg
     3121 tcgaaaacga gtatatataa atttgatatt tttttctaaa atcatcattt tgcataagtg
     3181 cttttataag tgaatattca actttatacg gtgagtttgc aactatacga tcttttaaaa
     3241 atcctatgcg ttttttagta tgtctttttg tatggtacgt cggtatattt acatgattta
     3301 aaaatctttg atacatagat tcaagaggaa ctatgatatc attttgtatg tttccgccgc
     3361 cttggttggt atttgaataa aaatgtatca tactaagtgt tatgtgcata gctttttcat
     3421 atttatcgtt ttggacaaaa tagttgaaaa tttttagcat aagatcatat atttttataa
     3481 tttgtctatt tacaaatacg tttgtaaatt tccaaaatat tatgagatta ttatttaaaa
     3541 tatttctttg ctgagcatta tcaagcttta ggtagtaatc gggatcaaaa agctttttgc
     3601 atacgtcata atacaactca aaactaatat ctttgcagta tttttcaaaa aactcaagat
     3661 agttggctaa atttggaatc tcagagcaat taagcaatgc aaagctcagt atatagtatt
     3721 ccatagcttc ttttgtctta gagtttagta tcaaacaagt tgtttttaaa tgcaccaata
     3781 gaagtttttg atttatgtca tcacaagaat caaggtagtt gtcggctgtt tttatatagt
     3841 tttcaaactc ttttttatct tctaaattta agtctttaaa aacttttata agccaaagat
     3901 gctcttttgg aggcagatcg tttttattta aaacaaagtc gtaaaatgcg tttctaagtt
     3961 ccaaaagctc atcacggctc aactttggta tatctccaga agctattttt ttgactaaaa
     4021 tatctatatc aatcttactt ttgaacaaag ttatcctcaa tgattattaa tttaaagtaa
     4081 aagccctaaa ttagggctaa attttgtaat agcggcttac atcgaccctt gaggtttcat
     4141 catgggtgct agttttttga cctcgacgtc ttttaggtct attttactag agtcgctaaa
     4201 ctcaagagtt aaatcgactt tatctgtgat ttctaaaggt ttatttatat caattagcat
     4261 tatatgaagt ccgcctggtt ttaattcaac gctgctgttt gcagggatat ctatttttgg
     4321 aattctaacc atttttttca ttccgttttc atttaaatga gtatgaattt cgaaaacctt
     4381 actcgcattg ctgtttccag atactaaaga tacatctttg tttgtgttat ttttgataac
     4441 cataaatgcg gcgctggttt tagcatttgg aggtgtagcc tttacgaaag gagactctat
     4501 atcgatgttt gcagctaaac atagcgaact tagtaaagcg catgaaagag taaatttaaa
     4561 cactgtaaat cctttatggt ttaatgtaac aaagattgta tagcaatttt gataaaagat
     4621 aactgaaaat ttaaaaatct taggctataa taacgcctta aaaatactaa aaattaaggg
     4681 tcaaaacatt gaaaaagttt ctaatttttg ttttgtgttt tttgagtttt ttatattcaa
     4741 aagacctcga aaaaatctat ttagaaagtg gtatcgaagc ggtacaaaaa gctatagagg
     4801 caaatttgca aagtaaagat tattggcaaa aacatttaag ccaaatggac ttaaagtatg
     4861 gctattacga tagtgatata tttatcgtag ttgtggataa aaaggcgaaa aacttttatt
     4921 taaacgagta taaagatgga aagttggact ctaaagcaga tcataaagtt ttaactggtc
     4981 tcatgggcga taagctttta gaaggagatc taaaaactcc ggttggagta tatgagataa
     5041 caaggcgttt tgtgcctgaa gatacttatt atggaccagt tgcgttcaat ctttcatatc
     5101 caaatctttt tgataagcta cgagatagaa ctggcggggg tatctggata catggatttc
     5161 ctctaaatgg aaatattaga gaagacgtat ataaaacaaa aggctgtgtt gtaatgccaa
     5221 atgacttgct gttaaattta gaaagcattt taaaggataa tggcggtatg gttttgataa
     5281 atgaaagcgg tattttagaa gctaaaaatg aagatatagc tcttatattt gcagaattat
     5341 ttaaatggaa agaggcttgg acaaatagtg atatcgatag atatcttagt ttttatgata
     5401 agaaatttaa aagatacgac ggagtaggtt ttgataaatt taaagagatg aaaaaaaata
     5461 ttttttctag aaaagagaac aaatttatac aatttactaa atttagtata actccgtatc
     5521 ctacgatcga tgatgagaat atttttagag ttagttttat ggagaaatat cgtgcttcgg
     5581 cttataaatt tgatggtatt aaaactcttt atgttaaact agatggcggc aagatgaaaa
     5641 tcttagtaga gcaataataa ggaaaaatta tgcaaaatac agacgttacg gaagaagaaa
     5701 aagagtttat aaaatctcag attgaagagc ttttaaaagc cagagacggt ttttttgaag
     5761 ttttagatgc aaacgtaccg aaaaaaggaa atacaaacgt ttttgatttt gacgcttgca
     5821 aagataagag tttaaaagag ctttatgcta agttctactc atatgactac tctataagaa
     5881 aaatacttcc ttatatttat aaaagatttg gcgtaaattt cagtgtctaa gatagttttg
     5941 agcaaaacag cttatatcca taatttaacc caaatttcaa gtaaaatagg atcaaaagat
     6001 cgaattatag cggttttaaa agatgatgct tatgggcacg gagctgtttt gatggcaggt
     6061 atagcaagtg gttttggtat aaaatgggct tgcgtaaaaa gcatagacga agctatagaa
     6121 atatccccct tttttaaaaa tattattatt ttatctcata taccaaacgg taaggagaat
     6181 gacgagttta tttatgctat aaatgatctt agcggtttag atgttataaa aagcggaatt
     6241 agcgttcatc ttgctattga cactatgatg cacagaaacg gtattggcat ctacgagatt
     6301 gaaactgctt ttaatatagc aaaaaaccgt tctataagaa tatgcggcgc ttatactcat
     6361 tttagaagta gcgacgagat aagcggagat tactacgtac aaaaagctaa ttttttaaaa
     6421 gctaagatca aacttaaatc attatttaaa aaaaatggcg ttgataaacc tatgtttcat
     6481 tcgcataatt cagccgccat cgaaagaaca aacggttttg acgatgagtt tgtacgcgcc
     6541 ggtatagttc agtttggtta ttcacagttt gatgagagtt taaatttaaa aaaagttttg
     6601 agtctctggg cggatagaat cagcaaaaga gtattaaaag caggtcaaag cgtaggctat
     6661 ggcggagctt tcacggctaa aaaagatata aatatcgcaa cgtatgattt aggatacgga
     6721 gatggacttt taagatataa cggtaagggc gatctgcact tagcaaacgg tgaaaaaata
     6781 cttggcaaaa tgtctatgga tagctttagt tgcgctgatt cgggtgatca gatatgtgtt
     6841 tttgatgatg ctagagtatg ggctaagttt ttcgatacga taagttatga tattttagtt
     6901 aagttaagtt caaagattaa gagagttgtt gtttgatttt tgaacttaac tattaaaata
     6961 tttgtaagcc gcgctttgtg agcgttcttt taaatttaaa agcctatcta tcctctgttt
     7021 tgtagatgga tgtgtacgga ataaatttga aataccgctt tttacggaac taaatggatt
     7081 tatgataaac atatgcgctg tttgttcatc cgcgtttttt aatacgcttt ttgaggcgta
     7141 accttctagt tttgaaagag cgttgacaag ataaataggg tctgttaaat tagctgaaaa
     7201 tctatctgct tcaaattctc ttgagcgaga tatgctcatt tgtattattg tagcggctaa
     7261 tggcataatt atggctaaaa ttattactat aacaatattt gctttatttt cgtttttatt
     7321 tagtccaact ccgaaatgag caaaatttgc taaaattgct atagctccgg caaaaatagc
     7381 tactatagat ccagtaagta tatcataatg tcttatatga cctagttcat gagcgattac
     7441 cgcttttatc tcattttcat caagtaaatt taaaagtccg tttgttaaag ctaccgccga
     7501 gttatgcggg tttctgccag tagcaaacgc atttggagta ttatccgata taatatatat
     7561 ttttggtata ggaatatttg cttttttaca taactcactt actatcttat aaagcgtgtt
     7621 tgagggctct acaagctgag cgttataatg ttttaatata agtttatcac tataaaaata
     7681 gctaaaaaaa ttaagaccta aggctattag aaatgctatg atcattccat tcaaaccacc
     7741 tatatatcct cccacgctta taaatagcaa cattaaaata accattaaac taacagtttt
     7801 taaaagctcc atcaaaatcc tcttattaca cttttatata tgctagcgtc tattctagcg
     7861 tctatagcag cttctaactc aaagtcgtca catatcaaaa ctgctatttt agaatcaaat
     7921 atatagtcat ttgctagtgc ttgtaattgt cttgcaaaat tcaaattatc gcaaactata
     7981 aatttaactc cgttggcgtt ggcaaaaata gcctcttttt ttgattttac ccttaaaaaa
     8041 tccggctttt tttgcaaact gtaaccgcta aaatcctcta aaacaacctc atcataaggt
     8101 acgaactcac tgccaaaaac tatcatttta gacactcctt gcaaatatat tttccatttc
     8161 ttaacacggt ttcatttata cttacaaatg tattgcactt atcgcattca acgaagtttt
     8221 cgctactgtt tgaagtttta ttttttctaa atttaggaag tataaaaaag tatatcgagg
     8281 ctataataag agcaaatatt atgatttttc ctagcatttt acacctttta aaaatagata
     8341 atttcttttt ccggagctta ttatactatt tttgcatttt aaatttgaga tttcttcttt
     8401 agctccgtct cctttatata ataaaaatgt tgtattttcg tcgtaaaatc ccctgcaaat
     8461 ttctataaga aatagagttt tactaagtgc tcttgaagtt ataagatcag cttttatttt
     8521 ttgacaagac tctattttgg agggatgaac ggttatgttt tttaaattta aagctgcgcc
     8581 tacgtatgat aaaaagcttg attttttcgc gatcggctca tagagatgaa attcgctgga
     8641 atttaaaatc aaacttaaaa aaatagccgg aaatccggct acactaccta cgtcaattac
     8701 aatttttgga ttaaaatcca aaaactcgag aggtttcata ctatcttcta cgacaggttt
     8761 tatatcgcgg taatttgtaa gactatgtat tttattaaat tgttttaaaa taatttcaaa
     8821 ttctcttact ttattccaaa aattatctgg taaattcatc taacatatgc cccatctgct
     8881 cttttttcac ctttaaataa tctttattaa attcattaga ttctatctct atgggaattc
     8941 ttttttctat atttacgcaa gtaagactag ctagttttag aggattattc gtgagtaaat
     9001 ttatactttt tataccaaaa tcttttagta taaaatctac tatttcgtac gttctttcat
     9061 cggctttaaa gcctaattga tgatttgctt ctattgtatc aagtccatta tcttgcaaag
     9121 cgtaagcatt tactttattt aaaagcccta tatttctacc ttcttgacgt agataaatta
     9181 ccattcctcc gtgtttgttt atatatttta aactagcttc tagttggtcg cggcagtcgc
     9241 attttaaact tcctatagcg tctccggtta agcattctga gtgaattctg acatttactg
     9301 tctttgttac gtctaaattc ggagaaaata tagtcaaatg ctctttgcag cagccttctt
     9361 t
//
LOCUS       DAPPKW010000072         9307 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.072, whole genome shotgun sequence.
ACCESSION   DAPPKW010000072 DAPPKW010000000
VERSION     DAPPKW010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9307)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9307)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9307
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.072"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            257..1318
                     /locus_tag="RPW04_001528"
     CDS             257..1318
                     /locus_tag="RPW04_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295617.1"
                     /translation="MSEKLTQEQLNEWSYLQDQELYSPLKSELEENEEKKKQAQQSFN
                     QSNEYLNEDTKGAIEKLGQKEKIDEQIQEKQVELNEFKSPKEKREFTKDNLEKIENNE
                     FLKESLDILKKQEKLDEQIKVKEKEIKNAKELKNENSKESNANEKEKGKENNSAEQDD
                     WNKRADELELQHEKELEKLKDEQSRLEANFQKSIDNLMNSDGINGIITALQEMDRSLE
                     MMMRQGKDESEAKDRQRKEKLELAFDSPNFREAVGDLVKEVYAQRKEVQSGLKEMEKE
                     HANYAKLKTAYEKEVKNGLDVKGHEKLSKMMGDIEKETPNFKEAYPKFYKKVNDSLEQ
                     AKDKIKNKILNNQDKGREI"
     gene            1315..1932
                     /locus_tag="RPW04_001529"
     CDS             1315..1932
                     /locus_tag="RPW04_001529"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295618.1"
                     /translation="MNQEQELQLSNLSPAQKRNVAKNALEKFERLDNLHIQGNLSDFD
                     NQRDVYIELNTALQFATEHNPQIAIEYRKNSQKMEQIYEEQEKRASFIKSEDTGKTEM
                     IPHKDDEKYVKFFEENNYKLAKELDKQLNMMENEAKLYEKTKNADNEKLKEISAKLKD
                     GVLKYSPIEEIDKERFKQSYPIATKRIEKAFQNQIETKKEQGMQI"
     gene            1929..2921
                     /locus_tag="RPW04_001530"
     CDS             1929..2921
                     /locus_tag="RPW04_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295619.1"
                     /translation="MKKSLISAVVASSLFLSSTNASGIPTIDVSAIAQQVMSYQQTLK
                     DYAEQIKQYEQMVKDTMNMEKQMRELGVDMNSVYEILGDTQSMINQMQNIYENVNNIP
                     NDIMGDIARVKTACSFLEQNSQFFNHSVRISSKNVINRMNQCTMALRDGANISKQVDA
                     ITEKMNKAIDPVERASYQAQISNLKIAAKFLQNKDNVEKTNRLLTFQDQFYNADKTNL
                     YSKAKMADDLKTLSKQLSKANNQKQAQALTNSILLKILEMMQYQYELNINYTSTMASI
                     RQATNESRSKNLTEDSFNQSVVEYKRNDAIFEPETKQLPKDELGLPKFVFKRSN"
     gene            2923..3291
                     /gene="ssb"
                     /locus_tag="RPW04_001531"
     CDS             2923..3291
                     /gene="ssb"
                     /locus_tag="RPW04_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDX6295620.1"
                     /translation="MNKIDLCGYLGRDFELRYSNTGNAIASNSLAITKKWTDGNGNKA
                     EHTDWIPIKLFGKTAEVANQYFKQGSQFLCSGELATDEYVDNNGNTRYVWEVRVKEFF
                     WLNKKGNEKDVCDPQEEINF"
     gene            3248..4042
                     /locus_tag="RPW04_001532"
     CDS             3248..4042
                     /locus_tag="RPW04_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295621.1"
                     /translation="MKKMSAILKKRLIFNKGAKMKKAVLTLSLGMIFVSGLFGSDILT
                     GDRRTACEVLLCLSSGTRPSECNPPLARFFAIKAKKPWKTLQMRRDFLALCPTDTGDT
                     AEDLVMSDYKEILANSEDPNQCTPPYLNNQLQNGRVSYSLNNKYYEKQGYKNNINNID
                     NGVRINPNMPSFCYALINHQYTDLKMPKYNCSGEFYTQTDWQNGYYLNLLGSSRFGNA
                     SEPSAYTNLPNNEKHKISYHVDNNHAGYYVTEYYQIIRFNKTCWSY"
     gene            4335..5558
                     /locus_tag="RPW04_001533"
     CDS             4335..5558
                     /locus_tag="RPW04_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3991 domain-containing protein"
                     /protein_id="HDX6295622.1"
                     /translation="MKDIKKLPLDIILINNGYYYDREKSSQNYKVVKNDNGDKVIISR
                     ATSGDYLYFNPNNDSDKGNIYSFCKNRGVSVKDLIDENKINDIKELQNNTKKIINQDK
                     SNNEIVEKFKKLDKIDKNSFLTDKRKISSELLANFSSLKQDDKFKNAVVPTYTLDVVK
                     TNDGNREFLKQTGTISYLSKPLTHDPQGKPYDKPIKQLCNGTKGVEILKADGAYKSPK
                     DFKKIVICESMIDTLSYCEMKGVDLKETLLCSSNGQISVSQKEVIKALVKLAPNAEVV
                     LGFDNDERGKEFGKVLQEIVPNASRVMPVLKDFNDDLVVGKTLGLKAKDISKESILKP
                     LGELSKQVEYLSKKYDFLEPQAKNIKVKELFVCNISKFREIETKVKCLAGMRECYKRL
                     DIICRKIEKDYSRQR"
     gene            5718..5969
                     /locus_tag="RPW04_001534"
     CDS             5718..5969
                     /locus_tag="RPW04_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295623.1"
                     /translation="MDRRYNIFQRAYETMTELSNTPLPFEQISNMSDREIMFLKKTIE
                     MMANYLDSIGFEFKGLSQEILTFIDEEIEQRGQSNSLLN"
     gene            6400..6681
                     /locus_tag="RPW04_001535"
     CDS             6400..6681
                     /locus_tag="RPW04_001535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295624.1"
                     /translation="MTKIKILTAVAIAGLMLGGCAELKLPELPKVQKQENEKHKLTDE
                     ECKIILEKFRKAEVSTSDSYKRLEYDAHDCQIRSNGADIDIEKIMEINK"
     gene            6694..7023
                     /locus_tag="RPW04_001536"
     CDS             6694..7023
                     /locus_tag="RPW04_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HDX6295625.1"
                     /translation="MSSSVLAQKDILSYLSELKPSLQKDGIKEIGLFGSYAKGYADEN
                     SDIDIVVLADKKSFLDRLNAFKALEYLSDLKEKITNKFHKSVDICDFYSEEKMKNNKI
                     VKGAIYV"
     gene            7016..7576
                     /locus_tag="RPW04_001537"
     CDS             7016..7576
                     /locus_tag="RPW04_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF86 domain-containing protein"
                     /protein_id="HDX6295626.1"
                     /translation="MSNKIIYRLELAIEKIDQVFEVCKPKGITAALKDELLTKPAIMK
                     HIDVVYQQFDKLEKAQEYHVLDKFSKDDLKGIRNIRNWSSHDYDNIQNEIIENVIRTN
                     LPKLKQNLQKVLEETKKELCKDLEKNIDYFIKKQDILMPEAKTDLAKTIEKEYKRLQE
                     SGVELDKSYSDKIKNIIKENSKENQR"
     gene            complement(7596..9224)
                     /locus_tag="RPW04_001538"
     CDS             complement(7596..9224)
                     /locus_tag="RPW04_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase"
                     /protein_id="HDX6295627.1"
                     /translation="MSSIDWDKYFDDLKAIRAGRTKFIKSEHKNISFGSGKGFFGAGI
                     NFSKNNFTKQSVIKMISNLPKTSIKKCIDYALKNSLDGYAINEKGERVGSDEVMSAWS
                     KDFGTNKNSKDAWHLMFSINEPCNDKSSLYALQDAVKDILGRNFQGHKYAMVLHTHQN
                     NPHMHVVLNKKNNFTGKKIHFDSRLEIREFFDDARDAFAYALSARGLKYENKNFLDKD
                     LKSEFNKIKSNIKLEVDSYTAKDKINDYYDKMQDKNKAKYDATTKHIEIMNDELEKLK
                     KANKELLNLFLQYSKKRNKKAFKLAKELKESNKIIKQESLKILSEIKKVNKLSFDATR
                     LNEMKLANYKDRSNALTLLENFSYNYNKLYPKNKGASKADFENYKKVKRTIAILRDRK
                     DDDAKKYFDDSLIVTRMLGRNESLFKLGKKLEILDKNLYILEHSELGIDEAKEYKKRL
                     NDNKEFISDVCDKRFDYVATKLLKSENIKGDEFLFKEYFCGVALLNKEPNEKLLKIKK
                     EVDLMAKFNKNHSIKREKVKNRASLEVKQDLGRE"
BASE COUNT         3812 a         1275 c         1541 g         2679 t
ORIGIN      
        1 gaattagctt ttttaagatt ttaaaaggga ttagagccac gaaaaagaaa aaaacataaa
       61 agactaggct taaagagcta aaattgattg tagagcattt aaaaggcatt tgtgagcatt
      121 tcttaaattt tagccatttt ttgatttttg tgtgtcattt tttacagcta tcttaaattt
      181 gattagagat aaaatgctct aaagtgtttg tcttaaatta acactacgaa ttttaaatta
      241 atattggaat taaaagatga gtgaaaaatt aacacaagag caacttaatg aatggagtta
      301 tcttcaagac caagagctat atagtccatt aaaatcagaa ttagaagaaa acgaagaaaa
      361 gaaaaaacag gcacagcaaa gctttaatca atcaaatgaa tatttaaatg aagatacaaa
      421 aggagccatt gaaaaattag gtcaaaaaga gaaaatagat gagcaaatac aagaaaaaca
      481 agtagaatta aatgaattta aaagtccaaa ggaaaaacga gaattcacaa aggataacct
      541 tgagaagata gaaaacaatg aatttttaaa agagagcttg gatattttaa aaaaacaaga
      601 aaaattagac gagcaaataa aagttaaaga aaaagagata aaaaacgcaa aagagctaaa
      661 aaatgaaaat tcaaaggaaa gtaacgctaa cgaaaaagaa aaagggaaag aaaacaactc
      721 agccgagcaa gacgattgga acaaacgagc tgatgagctt gaacttcaac atgaaaaaga
      781 gctagaaaag ctaaaagatg aacaatcacg gcttgaagca aattttcaaa agtcaattga
      841 taatttgatg aatagtgatg gtataaatgg catcatcaca gcacttcaag agatggatag
      901 aagcttagag atgatgatgc gacaaggcaa ggatgaaagc gaagccaaag atcgccaacg
      961 taaagaaaaa cttgagcttg cttttgatag tccaaatttt agagaagcgg tgggtgattt
     1021 agttaaagaa gtctacgcac agcgcaagga agtgcaaagt ggattaaagg aaatggaaaa
     1081 agaacacgca aactatgcta aattaaaaac cgcatatgaa aaagaagtaa aaaatgggct
     1141 agatgtaaaa gggcatgaaa aactaagcaa aatgatgggt gatattgaaa aagaaacgcc
     1201 aaattttaaa gaagcttatc caaaatttta taaaaaagta aatgactcac tagaacaagc
     1261 aaaagataaa ataaaaaata aaattctaaa taatcaagac aaaggcagag aaatatgaat
     1321 caagaacaag aacttcaatt atcaaattta tcaccagccc aaaagcgtaa tgtcgcaaaa
     1381 aatgctttag aaaaatttga aagattagat aatttgcata ttcaaggaaa tttaagtgat
     1441 tttgacaatc aaagagatgt ctacatagaa ttaaatacag ctttacaatt tgcaactgaa
     1501 cataatccgc aaattgccat tgaatataga aaaaatagcc aaaaaatgga gcaaatttat
     1561 gaagaacaag aaaaaagagc tagttttatc aaaagcgaag atactggtaa aacagagatg
     1621 ataccacata aagatgatga aaaatacgta aaattttttg aagaaaataa ttataaactt
     1681 gctaaagagc tagacaaaca actaaatatg atggaaaatg aagcaaaatt atatgaaaaa
     1741 accaaaaatg ctgacaatga aaaacttaaa gaaatcagtg ctaaattgaa agatggtgtt
     1801 ttaaaatact cgcctattga agagatagat aaagaacgtt ttaaacaaag ctatccaata
     1861 gcaacaaaaa gaattgaaaa agcattccaa aatcagatag aaactaaaaa agaacaaggg
     1921 atgcaaatat gaaaaaatca cttatatcgg cagtcgtagc ctcgtcatta tttttaagta
     1981 gcacaaatgc aagcggaatt ccaacgatag acgtatctgc aatcgcacaa caagtaatga
     2041 gttatcagca aacattaaaa gattacgccg agcagatcaa acaatatgag caaatggtta
     2101 aagatacgat gaatatggaa aaacagatga gagagctagg cgtagatatg aatagcgtat
     2161 atgaaatttt aggcgatact caaagcatga ttaatcaaat gcaaaacata tatgaaaatg
     2221 taaataatat tccaaatgat ataatgggtg atatagcacg agtaaaaacc gcatgctcat
     2281 ttttagagca aaatagccag tttttcaatc attcggtaag aatatctagt aaaaatgtta
     2341 ttaatagaat gaatcaatgc acaatggcac tgcgagacgg agctaacata agtaagcaag
     2401 tagatgcgat tactgaaaaa atgaataagg cgattgatcc agtagaaaga gcaagctatc
     2461 aggcacagat cagtaatctt aaaattgcag caaagtttct gcaaaataag gataacgtag
     2521 aaaaaacaaa taggctttta acttttcaag atcaatttta taatgcagac aaaacaaatt
     2581 tatactcaaa agccaaaatg gcagatgatt taaaaacact atcaaaacaa ttaagcaagg
     2641 caaataacca aaaacaagcc caagcactta cgaactcaat attgcttaaa atattagaga
     2701 tgatgcaata tcaatatgaa ctaaatatta attatacaag cacaatggca tcaataagac
     2761 aagctacaaa tgaaagtagg tctaaaaatt taaccgaaga tagttttaat caatcagtcg
     2821 ttgaatacaa gcgcaatgat gcgatatttg aaccagaaac caaacagctc ccaaaagatg
     2881 agctaggact tccaaagttt gtattcaaaa ggagtaacta aaatgaataa aattgattta
     2941 tgtggatatc tcggcagaga ttttgaatta agatacagta acactggaaa cgcaatagca
     3001 agtaattcgc tagcaatcac taaaaaatgg acagacggca acggaaacaa ggcggagcat
     3061 acggactgga tacccattaa gctatttggt aaaacggctg aagtagcaaa tcaatatttt
     3121 aagcaaggct ctcagttttt atgctcgggg gagctggcaa cggacgaata cgtagataac
     3181 aacggaaaca cgagatacgt ttgggaagtt agagtaaaag aattcttttg gctaaataaa
     3241 aaagggaatg aaaaagatgt ctgcgatcct caagaagaga ttaattttta acaaaggagc
     3301 aaaaatgaaa aaagcagttt taacactgag cttaggtatg atttttgtaa gcggactttt
     3361 tggtagtgac attcttactg gcgatagaag aactgcttgc gaagtgttgc tttgtttaag
     3421 tagcggaaca cgccctagtg aatgcaatcc accacttgct agattttttg ctattaaagc
     3481 taaaaaacct tggaaaacac tccaaatgag aagagatttt ctagctcttt gccctactga
     3541 tactggagat actgcagagg atttggttat gagtgattat aaggaaatcc tagcaaattc
     3601 agaagatcca aatcaatgca caccgccata tttgaataat caattgcaaa atggaagagt
     3661 tagttattca ttaaataata aatactatga aaaacaaggt tataaaaaca atatcaataa
     3721 tatcgataac ggagtaagaa tcaatccaaa tatgcctagc ttttgttatg ctcttatcaa
     3781 tcatcaatat acagatctaa aaatgcctaa atataattgc agtggagaat tctatactca
     3841 aacagattgg caaaacggct attatttaaa tttattagga tcaagccgtt ttggaaacgc
     3901 ttcagaacct agtgcatata caaatttacc aaacaatgaa aaacataaaa taagttatca
     3961 cgtagataat aatcacgctg gatattatgt gacagaatat tatcaaatta ttagatttaa
     4021 taaaacttgc tggagttatt aaaatttaag ataaaataat agaagccata gggggattgc
     4081 atccccactt tcgtggggca agacttaata agccttgaca acaattatac aaagtagtat
     4141 aattacaatg aatgcaattt ttaacataca taatctcctt tctatggaga tataatatgc
     4201 cgtaggggtc cagccctatg gcaatcccca taacgaaatt atatcatcat aaacttctaa
     4261 tttatcttaa attttagtct attttaagtc ataaaggatg attaatggat gaaaatataa
     4321 aaatcgcaaa tgatataaaa gatattaaaa aattaccact tgatataatt ttaatcaaca
     4381 atggatatta ttatgataga gaaaaatcat ctcaaaacta caaagtagtt aaaaatgata
     4441 atggcgataa agtgattata tctagggcta cgagcggtga ttatctctat ttcaatccaa
     4501 ataatgatag cgataaaggc aatatttata gcttttgtaa aaatcgtggc gtaagtgtaa
     4561 aagatttaat agatgaaaat aaaataaatg atataaaaga attacaaaac aatactaaaa
     4621 aaataataaa tcaagataaa agtaataatg aaatagtaga aaagtttaaa aaacttgata
     4681 aaatagataa aaattcgttt ttgactgata agagaaaaat cagcagtgag ctattggcaa
     4741 attttagcag tcttaaacaa gatgataaat ttaaaaatgc agtagtaccg acatatacac
     4801 tagatgtggt taaaacaaat gacggcaata gggagttttt aaaacaaact ggcaccataa
     4861 gctacctatc aaagccactc acgcacgatc cgcaaggaaa gccatacgat aagccgataa
     4921 agcaactatg caacggaaca aaaggtgttg aaattttaaa agcagatgga gcatataaaa
     4981 gcccaaagga ttttaaaaaa attgtaatat gcgagagtat gatcgatact ttatcatatt
     5041 gcgagatgaa aggtgtggat ttaaaagaga cactgctatg ctcctcaaat gggcaaatat
     5101 cagtttcgca aaaagaagtt ataaaagcac ttgtaaagtt agcaccaaat gcagaagttg
     5161 tgctaggatt tgataacgat gagcgtggca aggagtttgg taaagtcttg caagagatag
     5221 ttccaaatgc gagtagagta atgccagtat taaaagattt taatgacgat ttggtagttg
     5281 gcaaaacatt agggctaaaa gcaaaggata taagcaagga aagcattcta aagccattgg
     5341 gggagctttc aaagcaagta gagtatctat caaagaagta tgatttttta gagccacagg
     5401 caaaaaatat caaggtaaaa gagctatttg tgtgcaatat atctaaattt agagaaatag
     5461 agacaaaagt aaaatgttta gcaggaatga gagagtgcta taaaagacta gatattatct
     5521 gtagaaagat agaaaaagat tattcaagac aaagataaaa agggaaaaaa tagccgtttt
     5581 ttaaacttta agacttatat aagcttataa aatatagcac taaagccgat aaaatcgcta
     5641 tttaatagta ttttatgaat tgctattttt tacaaaatgt tctaaaaaag taaaaaaaaa
     5701 gggggggggg ataaaatatg gatagacgtt ataatatatt tcaaagggca tacgagacaa
     5761 tgaccgagct atcaaatact cctctccctt ttgagcaaat aagcaatatg agcgacagag
     5821 agattatgtt tttaaaaaag accatagaga tgatggcaaa ttatcttgac tcaataggct
     5881 tcgaatttaa aggtttaagc caagaaatcc taacgtttat cgatgaagag atagaacaaa
     5941 gaggacaatc aaactcgctt ttaaattaaa aactcaataa ttaaaaaagc accgctaaat
     6001 ataacagcag ttcaagacaa agataaaaag ggaaaaaata gccgtttttt gaactttaag
     6061 cattacgtaa gtttttataa agttgtgttt taccaccttt ttataggtat ttggtggagt
     6121 ttttgggcta gtaaattttt acaaaatttc aacaaaatgt cggaaaattt agcgaaaatt
     6181 tagcaaagtt tggtggggct tgattgaaaa tatcaaaata cataaaaaat taatcttata
     6241 tatgtttttt attgttttaa tatatctaaa ttatacttta aaatatattt ttattattta
     6301 tattttatat gtttatttat atttttatta tttgtttttt atatgttttt aagtaaaaat
     6361 atggtatcat atactcaaaa aataaggaga agataaaaaa tgacaaagat taaaatttta
     6421 acagcggtag cgatagccgg attaatgtta ggcggttgtg ctgaattgaa attacctgag
     6481 ttgccaaaag ttcaaaagca agaaaatgaa aaacacaagt taacagatga agagtgtaag
     6541 ataattttag aaaaatttag aaaggcagaa gtcagcacct ctgattctta caaaagacta
     6601 gagtatgatg cgcacgattg tcaaattaga tcaaacggtg ctgatataga tattgaaaaa
     6661 ataatggaaa ttaataaata aggagtaggc tatatgtcat catcagtttt agcacaaaaa
     6721 gatatactat catatttatc cgaactcaag ccaagccttc aaaaagacgg catcaaagag
     6781 ataggcttat ttggaagcta tgccaaaggt tatgctgatg aaaattcaga tattgatata
     6841 gtcgttttgg ctgataaaaa gagtttttta gatagattaa acgcatttaa agcacttgag
     6901 tatttaagtg atctaaaaga gaaaattact aataaatttc ataagtcagt agatatttgc
     6961 gatttttatt cggaagaaaa aatgaaaaat aataaaatag taaaaggggc tatttatgtc
     7021 taataaaatt atatatcgtt tagaattggc aatagagaag atagatcaag tgtttgaagt
     7081 atgtaaacca aaaggtatta ccgcagcact aaaagatgaa ttattgacaa agcctgcaat
     7141 aatgaagcat attgatgttg tgtatcaaca atttgataag cttgaaaagg cacaagaata
     7201 tcatgtgttg gataaattta gcaaagatga cctaaaagga ataagaaata tcagaaactg
     7261 gtcttctcat gactatgata atatacaaaa cgagatcata gaaaatgtaa tacgcacaaa
     7321 tttaccaaag ctcaaacaga acctacaaaa agtgttagaa gaaacaaaaa aagagctatg
     7381 caaagactta gaaaaaaata ttgattattt tatcaaaaaa caagatattt taatgccaga
     7441 agcaaaaacg gatcttgcaa aaaccataga aaaagagtat aaaagactac aagaaagtgg
     7501 cgttgaatta gataaatcat atagcgataa aataaaaaat atcattaaag aaaactcaaa
     7561 agaaaatcaa agataagttt aaaaaggcag aaaaactact ccctgcctaa atcttgctta
     7621 acttccaaac tggctctatt tttaactttc tctcttttta tgctatgatt tttattaaat
     7681 ttagccatta aatccacctc ttttttaatt tttaaaagct tttcatttgg ctctttattt
     7741 aaaagagcta ccccacaaaa gtactcctta aataaaaact catccccttt tatattttca
     7801 ctttttaaaa gctttgtagc cacataatca aagcgtttat cgcacacatc actaataaat
     7861 tctttattat cattaagcct ttttttatac tctttagctt catcaattcc gagttccgaa
     7921 tgctctaaaa tatataaatt tttatctaaa atttcaagtt ttttaccgag tttaaatagg
     7981 ctttcgttgc gaccaagcat cctagtaacg atcaagctat catcaaagta ttttttagca
     8041 tcatcatctt ttctgtcacg aagtatggcg atggttcgtt taactttttt ataattctca
     8101 aaatcagcct tacttgcacc tttatttttt ggataaagtt tgttgtagtt atagctaaaa
     8161 ttttcgagca aagtaagagc atttgatcta tctttataat ttgcaagctt catctcgtta
     8221 agcctagtgg catcaaatga taatttatta acttttttaa tctcagatag aattttaaga
     8281 ctttcttgct ttataatttt attgctttct tttaactctt tagcaagttt aaaggctttt
     8341 ttatttcttt ttttagagta ttgtaaaaac aaattcaaaa gctctttatt tgcttttttt
     8401 agtttttcaa gctcatcatt cataatttct atatgcttag tcgtggcatc atatttagct
     8461 ttattcttat cttgcatttt atcgtagtag tcgttaattt tatcttttgc agtgtaacta
     8521 tcaacttcaa gtttaatatt ggattttatt ttgttgaatt cactttttaa gtccttatcc
     8581 aagaaatttt tattttcata tttcaaacca cgagccgaca aagcataagc aaatgcatcc
     8641 cttgcatcat caaaaaattc tctaatctcc aaacggctat caaagtgaat tttcttaccg
     8701 gtaaaattat tttttttatt caggaccaca tgcatgtgtg gattattctg atgagtgtga
     8761 agcaccattg catatttatg cccttgaaaa tttctaccta aaatatcttt gacggcatct
     8821 tgtaaagcat agagcgaact cttatcattg cacggctcat ttattgaaaa cataagatgc
     8881 cacgcatctt ttgagttttt atttgtacca aagtctttac tccaagcact catcacttca
     8941 tcactgccta ctctttcccc tttttcattt atagcatagc catcaagtga attttttaaa
     9001 gcataatcaa tacatttttt aattgaagtc tttggtaaat ttgaaatcat tttaatgaca
     9061 gattgcttgg taaaattatt ttttgaaaaa ttaattccag ctccaaaaaa tcctttaccg
     9121 cttccaaaag aaatattttt atgctcggat ttaataaatt tagttcgacc agctctgata
     9181 gcttttagat cgtcaaaata tttatcccaa tcaatactac tcaaaaaatt ctccaaaaaa
     9241 ataaaataaa aaattgaaac taaaaatttt atttgtaaaa atattagtgt agaaaaagtt
     9301 aaagaaa
//
LOCUS       DAPPKW010000073         9039 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.073, whole genome shotgun sequence.
ACCESSION   DAPPKW010000073 DAPPKW010000000
VERSION     DAPPKW010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 9039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9039
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.073"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            47..2668
                     /locus_tag="RPW04_001539"
     CDS             47..2668
                     /locus_tag="RPW04_001539"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002947966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDX6295628.1"
                     /translation="MAEFYNPKEIEEKFYKIWEDRGYFEIDGNKAILEKDKKFCIMMP
                     PPNVTGVLHIGHALTFTLQDIMTRYKRMDGYKALWQPGLDHAGIATQNVVEKQLLANG
                     VTKEQIGREEFLKKTWEWKEKSGGSIVHQMRRLGITPAWSRERFTMDAGLKNAVRKAF
                     VNLYNKGLIVRGNYMVNWCTHDGALSDVEVEHKANKGKLYHIKYPIVNSDKFVIVATT
                     RPETYFGDTAVMVNPKDERYKGLVGKFVTLPIIDRRIKIIADDHVDMDFGTGIVKVTP
                     AHDTNDYEVGNRHGLEFITVFDEKGILNEQCGEFEGLERLEARDKVVAKLESLGFIEK
                     IEDYENQVGYCYRCKNVVEPYISKQWFVKSDIANEAIQNVNDGGAEFFPSHWINSFNA
                     WMRELKDWCISRQLWWGHQIPVFYCECGHEWADENEKPIKCPKCGGNKFTQDPDVLDT
                     WFSSGLWPISTLGWGNADELKNEKWFERDLSEFYPNTMLITGFDILFFWVARMMFQCG
                     NAVGELPFKDIYLHALVKDKDGKKMSKSSGNVIDPLTKIDEYSADILRFTLTLLCVQG
                     RDIRLSEEKMVLVRNFTNKLYNASKFLLLNAGNFPDFDENSIKTDLGRYMLSRFKSCV
                     NLVRSNLDAYRFNDAANDIYKFLWDEFCDWGIELSKVDKSSVIELGMIFKESMKLLSP
                     FMPFISEYLYHELSGTNLENSGSIMVMKYPKISTPDQKIVETWSAVIEAIVSLRRAKA
                     TIDQGNAKVKKAYIKFNNKIDINGVTNYIKLLAKCEEIELTDEIVPNSARDVSENLES
                     FVPLDGVDTAPIIARLSSQKAKLEKEIAKLEGMLNNEKFVANAPETVLSANREGLTTA
                     KDKFEKVMSELKTLGVI"
     gene            2665..3633
                     /locus_tag="RPW04_001540"
     CDS             2665..3633
                     /locus_tag="RPW04_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HDX6295629.1"
                     /translation="MIQITNLKKYYGKNLIINDVSCKIKAGEIFAIVGHSGAGKSTLL
                     RCINGLESYQSGSLKVDNKEVSNLNENELRELRRNIGMIFQHFALMSRKTVFENIATP
                     LKFWKYDKEYIQKRVHELLELVGLSDKANSYPNSLSGGQKQRVAIARALALKPKILLS
                     DEATSALDPNTTNQILTLLRQINETLGITIVLVTHEMEVVKSISNRAILLEQGIITNQ
                     GNIIDLFLKPDENMKKFLGAEEILPTTGVNIRLFFPPKVAFNSVITSMARELNIDFNI
                     VWGKLERLGNNVLGSLVINVDPKDEIKVEEFIKKSGVLYEIVKEQK"
     gene            3630..4271
                     /locus_tag="RPW04_001541"
     CDS             3630..4271
                     /locus_tag="RPW04_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDX6295630.1"
                     /translation="MIPKLLLEATIDTLYMTFISTFLAFMIGLGLAIILVLTKPNGLK
                     PNKGIYNTLDLIVNVLRSFPFIILIIVLFPLTKFIVGTSIGTSAAIVPLTIGSAPFIA
                     RLIENAMNEVDYGVIEAALSYGANKTQILFKIMFIEALPSIINAITLTLIVVIGFTAM
                     AGAVGGGGLGDVAMRYGFQRFRPDIMAYTVIILIVLVQVIQMIGNLLYKITKK"
     gene            complement(4330..5121)
                     /gene="thiD"
                     /locus_tag="RPW04_001542"
     CDS             complement(4330..5121)
                     /gene="thiD"
                     /locus_tag="RPW04_001542"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HDX6295631.1"
                     /translation="MQKILTIAGSDCSGGAGIQADIKTITAHKMYAMSVITALTAQNT
                     MGVYGVHEAPSEFVKAQIDACFKDIVPNAVKIGMVSNSYIIKAIAAKLKEYNAKNIVI
                     DPVMVATSGGKLMQDSAIEDAISELFCLADIITPNIAEAEILSDIKIIGIHHMKEAAL
                     KISQLTGGAVLVKGGHLRDDASDVLYYNGKFEVLSEERVHTNDTHGTGCTLSSAIACA
                     LGANKDMYYAVKSAKKFVTTALKGDLKIGNGNGAIDHYFRIPEIF"
     gene            5409..6182
                     /locus_tag="RPW04_001543"
     CDS             5409..6182
                     /locus_tag="RPW04_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HDX6295632.1"
                     /translation="MKKLTIAALLASSLISAAFGEVIKVGATPVPHAEILEFIKPELK
                     KAGYDLEIKVFNDYVIPNLAVEDGDLDANFFQHIPYLNEFNANKGTHLVKTVGVHLEP
                     MGVYSKKLKSLKDLKDGAIVSIPNDPTNESRALDVLVNAKLIEVDLSAKLRTPLDITK
                     NPKNLKFKEIEAATLPRTLDDVDIAVINTNFAMNANLNPTKDALLIESKESPYVNIVV
                     VKDGNQNSKKIKALDNAINTDSAKKFISDNYKGAVVPAF"
     gene            6279..6470
                     /locus_tag="RPW04_001544"
     CDS             6279..6470
                     /locus_tag="RPW04_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009651385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDX6295633.1"
                     /translation="MSKRCAITGKGPMVGNNVSHANNRTKRRFMPNLRTVRVMLEDGT
                     TRKIRVAASTLRTMKKQSH"
     gene            6490..7621
                     /locus_tag="RPW04_001545"
                     /pseudo
     CDS             6490..7621
                     /locus_tag="RPW04_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009293929.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
     gene            7614..8801
                     /gene="argJ"
                     /locus_tag="RPW04_001546"
     CDS             7614..8801
                     /gene="argJ"
                     /locus_tag="RPW04_001546"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009651178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HDX6295634.1"
                     /translation="MFNLISLKNGLENVEGFYFGGVNAGFKTNGDNDLGFIRSDEPVM
                     VSAIFTSNKFQAAPIKHFKKYGKNFKTNFVLLNSKNANAMTGKAGIDDIDDIFKELGK
                     KLNLINPIMSSTGVIGYRLKKDKIIEAANKFDLISRNSDATAQAIMTTDSFKKEIAFR
                     VELEDGKSFNIACICKGAGMINPAFATMLCFILTDANIPQKDMDELLKSCVEESFNAI
                     SVDGDTSTNDTLMLLSSQKSGVYDKDAFKFALETITKTMALNLVKDGEGSTKVVAFEV
                     NGAKNYDEAQKAAKALSNSLLVKTAIFGEDPNWGRIASTIGASGVECDEEKLIIYYDD
                     VLVFDKNNPELDQEREIKAHNVMKKNSYKISCFLGIADAKFTAYGCDLGHTYVKINAD
                     YRS"
     gene            8863..>9039
                     /locus_tag="RPW04_001547"
     CDS             8863..>9039
                     /locus_tag="RPW04_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HDX6295635.1"
                     /translation="MLHEYRDLITELKGKNARFDSVFDKHNELDQRISDIEEGREYAD
                     PYELETLKKEKLRLK"
BASE COUNT         3307 a         1456 c         1695 g         2581 t
ORIGIN      
        1 taaatttaga taaaatctag cattttttaa atttaaaggt aaatttatgg ctgagtttta
       61 taatccaaaa gaaattgaag aaaaattcta taaaatttgg gaagatcgcg ggtatttcga
      121 gatagacgga aacaaagcta tcttagaaaa agataagaaa ttttgtataa tgatgccacc
      181 gccaaacgta actggagtac ttcatatagg acacgcgctt acatttactt tacaagatat
      241 aatgacaaga tataaaagaa tggacggata caaagcgctt tggcaacccg gacttgacca
      301 cgcaggtatc gccactcaaa acgtcgtaga aaaacaactt ttagcaaacg gagttacaaa
      361 agaacagatt ggacgcgaag aattccttaa aaaaacctgg gaatggaaag aaaaaagtgg
      421 cggaagtata gttcatcaaa tgcgtcgtct tggtataact cctgcttgga gcagagagcg
      481 ctttactatg gacgcgggac ttaaaaacgc cgtaagaaaa gctttcgtaa atttatataa
      541 taaaggcttg atagttcgcg gaaattatat ggtaaattgg tgtactcacg atggcgcact
      601 tagcgacgta gaagtcgaac acaaagcaaa taaaggcaaa ctttatcata taaaatatcc
      661 tatagttaat agcgataaat ttgtaatagt cgcaacgact agaccagaaa cgtactttgg
      721 cgataccgcc gtaatggtta atccaaaaga tgagagatat aagggtcttg taggcaaatt
      781 cgtcactctt cctatcattg atcgccgcat aaaaatcata gccgatgatc acgtagatat
      841 ggactttgga acaggcatag ttaaagtcac tccagctcac gatacaaatg actatgaagt
      901 cggtaacaga cacggcttgg agttcataac tgtatttgat gaaaaaggca tattaaatga
      961 gcagtgcggt gagtttgaag gacttgaaag acttgaagca agagataaag tagtagctaa
     1021 actagagtct ttgggcttta tagaaaagat agaagactat gaaaatcaag tcggatactg
     1081 ctatcgctgc aaaaacgtag tagaaccata catatcaaaa caatggtttg taaaatcaga
     1141 tatcgcaaac gaggcgatac aaaatgtaaa tgatggcgga gcggagtttt tcccgtctca
     1201 ttggataaat agctttaatg catggatgag agagctaaaa gactggtgca tctcaaggca
     1261 actgtggtgg gggcatcaaa ttcccgtatt ttactgtgaa tgcggacatg agtgggcaga
     1321 cgaaaacgaa aaaccaataa aatgcccaaa atgcggcgga aataaattta ctcaagatcc
     1381 agacgttctt gatacgtggt ttagttcagg actttggcct atctcgacac ttggatgggg
     1441 aaacgcggac gagctgaaaa atgagaaatg gtttgagaga gatttgagtg aattttatcc
     1501 aaacactatg cttataacag gatttgatat actatttttc tgggtcgcta gaatgatgtt
     1561 tcaatgcggg aatgcagtgg gcgagcttcc atttaaagat atctatcttc acgctcttgt
     1621 caaagataaa gacggtaaaa agatgagtaa aagtagcgga aacgtgatag atccgcttac
     1681 caaaatagac gaatactcag ccgatatctt gcgttttacg ctcactttgc tttgcgtgca
     1741 aggtcgtgat atcagactta gcgaagaaaa aatggtatta gtaagaaact tcacgaacaa
     1801 gctttataac gcaagtaaat tcctacttct aaacgcgggc aattttcctg attttgatga
     1861 aaatagtata aaaacagatc ttggtagata tatgctaagc cgatttaaaa gctgcgtaaa
     1921 tttagtaaga tcaaatttag acgcatatag gtttaacgac gcggcaaacg atatatataa
     1981 attcctttgg gacgagtttt gcgactgggg aatcgagcta tcaaaagtag ataaaagtag
     2041 cgtgatcgag ctaggaatga tatttaaaga gagcatgaaa ctactaagtc catttatgcc
     2101 gttcatcagc gagtatttgt atcacgaatt aagcggtacg aacttagaaa attccggatc
     2161 tataatggtg atgaaatacc ctaaaatcag cactccagat caaaaaatag tcgaaacttg
     2221 gagcgcagtc atagaagcta tagtaagttt aaggcgcgca aaagcgacta tagatcaagg
     2281 caacgcaaaa gtaaaaaaag cttatattaa atttaataat aaaatagata taaacggagt
     2341 tacgaactac ataaaactac ttgcaaaatg cgaagagata gagctaacag atgagatagt
     2401 accgaactca gccagagacg taagcgaaaa ccttgagagc tttgtgccac ttgatggtgt
     2461 agataccgct cctatcatcg ctagactcag ttcgcaaaaa gcaaagcttg aaaaagagat
     2521 agctaaacta gaaggtatgc taaataatga aaaattcgta gccaacgctc cagagaccgt
     2581 cttaagcgcc aaccgcgaag gattaacaac ggcaaaagat aaatttgaaa aagtaatgag
     2641 cgaacttaaa accttaggcg taatatgata caaataacaa atttaaaaaa atactacggt
     2701 aaaaatctta tcataaatga tgtttcatgc aaaatcaaag ccggtgaaat ttttgctata
     2761 gttggacaca gcggcgccgg aaaaagcact ctgcttcgct gcatcaatgg acttgagagc
     2821 tatcaaagcg gaagtttaaa agtagataac aaagaagttt caaacttaaa cgaaaatgag
     2881 cttagagagt taagacggaa tataggcatg atatttcaac attttgctct tatgagcaga
     2941 aaaacggtat ttgaaaatat agccactccg cttaaatttt ggaaatacga taaagaatat
     3001 atccaaaaaa gagttcatga acttttagag cttgtagggc taagcgataa agcaaacagc
     3061 tatccaaact cgctaagcgg aggtcaaaaa caacgagttg cgatagctag agctctagca
     3121 ttaaaaccaa aaattttgct tagcgatgag gctacaagtg cgcttgatcc aaatactaca
     3181 aatcaaattt taactctttt aagacaaata aatgaaacct taggtataac tatagtttta
     3241 gttactcacg aaatggaagt tgtaaagagt atatcaaacc gcgctatttt acttgaacaa
     3301 ggtatcataa caaatcaagg taacataatc gacctatttt tgaaaccgga tgaaaatatg
     3361 aaaaaattct taggagcaga ggaaatttta cctacaaccg gagttaatat cagactattt
     3421 tttccgccta aagtcgcttt taacagcgtt ataacatcaa tggctagaga acttaatata
     3481 gacttcaaca tagtatgggg aaaactagaa agattgggca ataacgtgct tggaagtctt
     3541 gttataaacg tagatccaaa agatgaaata aaagtagaag aatttataaa aaaatcaggc
     3601 gtgttatacg agatagtaaa ggagcaaaaa tgataccaaa acttctttta gaagcgacta
     3661 tagatacact ttatatgact tttatatcta cgtttttagc tttcatgatc ggtttggggc
     3721 ttgctattat attggttttg acaaaaccaa acggtcttaa accaaataaa gggatttata
     3781 acacattgga tttaatagta aatgtgctta gaagttttcc gtttataata ctcattatag
     3841 tgctttttcc tcttactaaa tttatagtag gcactagcat aggaacaagt gcggctatcg
     3901 ttcctcttac tatcggttcg gctccgttta tagcgcgtct tatagaaaac gctatgaatg
     3961 aagtggatta tggcgtcata gaggctgctc ttagctatgg tgcaaacaaa actcaaatct
     4021 tatttaaaat tatgtttata gaagcacttc ctagcattat aaacgctata actctaactc
     4081 ttatagtagt gattggattt accgcaatgg ccggagccgt tggcggaggc gggcttgggg
     4141 acgtggcgat gagatacggt tttcaaagat ttcgtccaga tatcatggcg tatacggtaa
     4201 tcatcttgat agtcttagtt caagttatcc agatgatagg aaacctactc tataaaatca
     4261 ctaagaaata aatttatacg aaaattttga atatattttc aaataatatc tagctcattt
     4321 cgagctagat caaaaaatct caggtatcct gaaataatga tctatcgcgc cattaccgtt
     4381 gcctattttt aagtcccctt ttaaagcagt tgtgacgaat tttttggcgc ttttgactgc
     4441 ataatacata tctttatttg ctcctaaagc acatgctata gcacttgaaa gagtgcaacc
     4501 agtaccgtga gtatcgtttg tatgaactct ttcttcgctt agcacctcaa atttgccgtt
     4561 gtaatacaaa acatcgcttg catcatctct tagatgcccg ccttttacta aaaccgctcc
     4621 gcctgtaagt tgtgatatct ttaaagcagc ttctttcata tgatgtatgc ctattatctt
     4681 tatatcgctt aaaatctcgg cttcggctat atttggcgtt ataatgtcgg ctagacaaaa
     4741 cagctcgctt atagcatctt ctatggcgct atcttgcatt aatttaccac cgctagtagc
     4801 taccataacc ggatctataa ctatattttt agcgttatac tcttttaatt ttgctgctat
     4861 agcttttatt atatatgagt ttgataccat accgatttta actgcatttg gaacgatatc
     4921 tttaaaacaa gcgtctattt gagctttaac aaactcacta ggagcttcat gaacaccata
     4981 aacacccatt gtattttgtg cagtaagagc tgtgataacg ctcattgcat acattttatg
     5041 agcagttata gttttgatgt ctgcttgtat gccagctcct ccactgcaat cagaacctgc
     5101 tatggttaaa attttttgca ctttatttcc ttgtttttta atattattat atcagcttag
     5161 agttaaatta tcctattttt atgaaaataa aataatttga taaatatttt ctaaatttaa
     5221 aatcgttttt acaactaaat tttatctgaa aatatataaa tatatttaat agatatataa
     5281 atttatattc ccttttttag gcaattaaat ataaaattta gtaaaaattt aaaaaattat
     5341 atcaaagcac ttgatttaca taactatttt ttagtataat accgccaaat ttaaaaaagg
     5401 gagacgaaat gaaaaaatta actatcgcag cgctacttgc ttctagcctt ataagcgcag
     5461 catttggaga agttatcaaa gtcggagcta ctccagttcc tcacgcagag atcttagagt
     5521 ttataaagcc tgagctaaaa aaagcaggat atgatcttga aattaaagta ttcaatgatt
     5581 atgtaattcc aaatctagcg gttgaagacg gtgatttgga tgcaaacttt tttcaacata
     5641 taccgtattt aaatgagttt aatgcaaaca aaggcactca tttagtaaaa acagtaggcg
     5701 tacatcttga gccgatggga gtttatagta aaaaactaaa atctcttaaa gatctaaaag
     5761 acggtgctat agtaagtata ccaaatgatc ctacaaacga aagtcgcgct cttgatgttt
     5821 tagtaaatgc taaacttata gaagtagatt tgagcgctaa attaagaact ccgcttgata
     5881 taactaaaaa tcctaaaaat cttaaattta aagagatcga agccgccact cttccaagaa
     5941 ctttagatga tgttgatata gccgttataa atacgaattt cgctatgaac gcaaatttaa
     6001 atcctacaaa agatgcgctt cttatagaaa gtaaagagag tccgtatgtt aatatagtag
     6061 ttgttaaaga cggaaatcaa aatagcaaaa aaataaaagc acttgataat gctatcaaca
     6121 cagactcagc taaaaaattt atatctgata attataaagg cgctgtagtt cctgcgtttt
     6181 aatttctaaa atttgggctt atgatgccca aatttaagct aaatttacaa ttattttaga
     6241 tataatcagc ccaaattttt gtttgtaagg aaaaaaatat gtcaaaaaga tgtgcaataa
     6301 caggaaaagg acctatggtt ggaaacaacg taagtcacgc taataataga acaaaaagaa
     6361 gatttatgcc aaaccttcgt acggttcgtg ttatgcttga agatggtaca acaagaaaaa
     6421 tcagagttgc agcttctact ttaagaacaa tgaaaaaaca atcacactaa tacataaaaa
     6481 gaggaattaa tgtctttact acaaaagatt aaaaaattcc tcaattggac tgatgagtcc
     6541 aaaccagaat acgatctaaa tacagaactt taccagcagt taaaatcatt tagacttcct
     6601 ttgatatccg ttgttcttat gatgctattt ggagctttag gatatgtttt tatcgatgga
     6661 tttactttaa tagacggtat ttatcaagcc ggtatgacct ttacgactgt tggttttacc
     6721 gaagttgcgc ctattagtcc atcagggaga ctttttacta taacttttat tctcatggga
     6781 tttggagttt ttacattttc tatgggtctt tttatagaag tacttaaaaa aggtgcttta
     6841 acgaaggttt taaaggagag aaatatgata tataaaatag ccagactcaa aaaccacttt
     6901 gtgatttgct atcacaatat ctatactata gaactcacaa gacaatttag agaaaatcat
     6961 ataccgtttg ttgtggtaga taatagagaa gatcttccta gtctagctga aatatataaa
     7021 tatccgtatt acatagtaga tgagccgcac acgcaaaacg ctatgttaaa aactcacctc
     7081 tcaagcgcaa aaggacttat aactttaagt tcaaatatcg ctgacaatat agctcttata
     7141 gcaaccgtta gactgtatga aaaagagctt ggtagaataa aaccatactt tataatgaca
     7201 aattcagata atgacgatga cacgcaaaaa ctaaaaaaat taggtgcaaa ctcggtagta
     7261 tctccatcaa aattagtcgc gcaacgactt tcggctatga gcgtacgacc ggatatggaa
     7321 aatatgctag agcaattttt atataaaaaa gattcgccga tcgatataga ggagataaaa
     7381 gttcccgatc tatcttggct aagattcaaa agattaaaag aaactcattt gcgagatatc
     7441 acaaacgccg atgtagtagg tatcagagat caaaataata aatttactcc tagtgccaaa
     7501 aggcgatact cttataggaa caggctcaag actgctagtt ataggaactg ccgagagtat
     7561 aagagctact aaaaaactca ttttcagtaa acacaaaccg gaggaattta aatatgttta
     7621 atcttataag cctgaaaaat ggacttgaga atgttgaagg gttttatttc ggcggagtaa
     7681 atgccggatt taagacaaac ggagataatg atctaggctt cataagaagc gatgagccgg
     7741 taatggtttc agctatattt acttcaaaca aatttcaagc agctccgata aagcatttta
     7801 aaaaatacgg taaaaacttc aaaacaaact ttgttttatt aaattcaaaa aatgcaaacg
     7861 caatgaccgg aaaagccggt atagatgata tagatgatat atttaaagaa cttggtaaga
     7921 agctaaattt gataaatcct atcatgagtt caaccggagt tatcggatat cgtcttaaaa
     7981 aagacaaaat aatagaagcc gcaaacaaat ttgatcttat ctcacgcaat tctgacgcaa
     8041 cagctcaagc gattatgaca acagatagct ttaaaaaaga gatagctttt agagttgaac
     8101 ttgaagatgg caaaagcttt aacatagctt gtatctgcaa aggtgcaggt atgataaatc
     8161 cagcatttgc gacgatgtta tgctttatct taacagatgc aaatataccg caaaaagata
     8221 tggatgaact tttaaaaagc tgcgtagaag agagcttcaa tgcgataagc gtagatggcg
     8281 acaccagcac caatgatact ttaatgcttt taagctcaca aaaaagcgga gtttatgaca
     8341 aagatgcttt taaatttgca cttgaaacta tcacaaaaac tatggcttta aatttagtaa
     8401 aagatgggga aggaagtaca aaagtagtag catttgaagt aaatggagca aaaaactatg
     8461 atgaagcgca aaaggcagca aaggctttgt cgaattctct tttagtaaaa acagcaattt
     8521 ttggagaaga tccaaactgg ggtagaatag cttcaaccat aggagctagc ggcgtagaat
     8581 gtgatgaaga aaagttaatt atatattatg acgatgtgct tgtattcgac aaaaataatc
     8641 ccgaattaga tcaagaaaga gagataaaag ctcataatgt tatgaaaaaa aacagctata
     8701 aaataagctg ttttttgggt atagcagacg ctaaatttac ggcttacgga tgcgatttag
     8761 gacacacgta tgttaaaata aacgcggatt accgttcata aatgagtttt aagtaagcaa
     8821 atgatacaat gctaagatat tattattttt aaaggagaga atatgctaca cgaatacaga
     8881 gatttaatca cggaactaaa aggtaaaaat gcaagatttg atagcgtttt tgacaaacac
     8941 aatgaacttg accaaagaat atcagatata gaagaaggca gagaatacgc cgatccttat
     9001 gaattagaaa ctcttaaaaa agaaaaatta agattaaaa
//
LOCUS       DAPPKW010000074         8851 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.074, whole genome shotgun sequence.
ACCESSION   DAPPKW010000074 DAPPKW010000000
VERSION     DAPPKW010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8851)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8851)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8851
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.074"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            217..3720
                     /locus_tag="RPW04_001548"
     CDS             217..3720
                     /locus_tag="RPW04_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase"
                     /protein_id="HDX6295636.1"
                     /translation="MINKTIELASELQNKIVQNISRHEKVFHQKMKKLLLNPQNKVML
                     IELLDRSFRCKDKKSSFELIQYTLNKYGIADFFTSYERFLLLAFLNLGKFMPDISVPF
                     FISHLRSETKDMVLDANENSLKKHIKLRNEDNITLNINLIGEEVLSEAESLYRIQKYE
                     EAIKSKYITYISIKITTIFSQINIIDFEYSKKEIVKRLDRLYQLALEEEKISGISKFI
                     NLDMEEYRDLELTVEAFMDSISKFNIKAGIVLQAYIPDSYHYLQRLFEFSKERVLKGF
                     APIKIRLVKGANKQSEEAISSQKGWALPTFDRKIDTDSNYKKMLDFVLSKDNYKFINI
                     GIASHNIFEIAHAYIKIKEAGATESFSFEMLEGMSIQCSYELSKLHDIILYAPVCSEE
                     HFNNAVAYLVRRLDENSSTDNFMRYFFNLEVGSREWNTQKELFLKSIDNISNIDNSAR
                     RTQDRSVNSHTNGSYDEFENEPDTDFILAKNRKWAQDIKSKFENMQNLEIYPVAKDIL
                     KTDDMDSYKVFDKPLNRKIGTVHLANIDQINRALKTANESNYSDLSHDEIYKILSKAA
                     EIFRQKRGDLIGIAALEVGKTFLELDPEVSEAIDFLEFYPHSLKKLKNEYQNIKFTPK
                     GVGVVIAPWNFPIGITTGTIAAPLAAGNRVIYKPSSLSAITGYKICEYFWEAGVPKDA
                     LIFLPAQGALISEHLLTNDSIKFTILTGSEDTAKTILEANPCLMLSAETGGKNATIVS
                     KMADKDQAIKNVIHSAFSNSGQKCSATSLLILEEEVYNDNNFKKSLVEAASSLQIGSP
                     FELKNKLAALASKPSTKLIKAINELKSYEQWALKPQFINDNPHFMTPAIKYGTKEGDF
                     THMTELFAPILTVMCAKDLNHALHLANSTGYGLTAGFESLDEREWEVFHQNIEAGNIY
                     INKPTTGAIVLRQPFGGIKKSAIGFGRKVGIYNYITQFTDITEDGCDINLKPCDISDK
                     LEKLDIQGYESNILKSLKELSFIAKSYAYHNENEFKTKKDYVNITGEDNIFSYTKVKN
                     TGYRISKDDSLRDIFAIIMAHEILEIPLYISFEENSNIQIVLKIADALGIALNLKQED
                     LVDFSKKIHEFDRIRYLSKASKNDIVYQKAAKNAKIIANAKPLSNGRFELLYYHNEKS
                     LSISYHRYGNLGARALQHMKG"
     gene            3724..5199
                     /gene="putP"
                     /locus_tag="RPW04_001549"
     CDS             3724..5199
                     /gene="putP"
                     /locus_tag="RPW04_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HDX6295637.1"
                     /translation="MESVNFSIEIAVTFVAYSALMLFIGFYFFKQNKSTEDYFLGGRS
                     MGPAVSALSSGASDMSGWLLMGLPGALYVSGFSQSYIAIGLTVGAFLNWKFVAKRLRI
                     YTSVVANSITIPDYFETRFDDKSHILRILCAIVILIFFTFYVSAGLVGGAKLFETTFG
                     FAYENALTTGTLIIVIYTFLGGYKAVCWTDLVQGLLMMSALIIVPIAMIYHIGGFGEA
                     INIIENIKPGALLMNEGIGVLGLISTLAWGLGYFGQPHILVRFMSIRSVKDIPTATFI
                     GISWMVISLIGACLIGVVGIAYVYKFNLSLSDPEKIFIVMSQLLFNPWISGILLSAIL
                     AAIMSTASSQLLVSSSTIAEDFYRRIFNKTASSKTVMNLGRVGVLIVALVAFIISTDK
                     NSSILSIVAYAWAGFGASFGSVMLFSLFWSNMTRLGAIAGMIVGAITVVVYKNFLSAY
                     LDIYEIVPGFIFASLAIIVVSLCTKVRPGTKAAYETMIKEL"
     gene            5449..5949
                     /gene="nrfH"
                     /locus_tag="RPW04_001550"
     CDS             5449..5949
                     /gene="nrfH"
                     /locus_tag="RPW04_001550"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase small subunit"
                     /protein_id="HDX6295638.1"
                     /translation="MRQCKAFTNLFGVFIVLLFVLFGVGFYTFYNAKGTSYFSNDSKS
                     CNNCHIMNDVYNDYLNAPHSKKVAGKPRASCVDCHLPHNFIDKWIAKGKSGLSHAYSF
                     TFKLDELPTNLSATNNSKMMVQNNCIECHTEIASNVINSTTNPHNDRSLSCVSCHTGV
                     GHKRGF"
     gene            5965..7788
                     /locus_tag="RPW04_001551"
     CDS             5965..7788
                     /locus_tag="RPW04_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming cytochrome c nitrite reductase
                     subunit c552"
                     /protein_id="HDX6295639.1"
                     /translation="MNKKGVIYFAIIVVIIAIAAVLMLNKDISKKQNEGTGGIASKEF
                     VELSDNNPTFDHWGKNFPDYLDMYLTVETEKPVSTEFGGNLAYSKLIRYPQLTMLWAG
                     YPFSIDANEERGHFWVQVDQMDTARNNKDFLNAHGFAAFGGQPAACMNCHSGWSPWLY
                     KNAAKGDWIAFNSTKYWTMIKNVPAVNGMEENSVEHSGPHGGKRMGLTCADCHNPKDM
                     SLRLTRQAAINSLIMRGYEADKEQGVKATREEMRTLVCAQCHVEYYFKPTGEKVKVMG
                     ESIAKDATKTWWNGKQKTYDEFDSWRDGNKPTQIEVDGIELIYPWSYWKKGTPFRIEM
                     FDDHYEAVRGVFDKDWPHKITKAPMLKIQHPEYELYSGGVHAANGVSCADCHMPYIRK
                     GSKKMTNHNVTSPLANINAACKTCHTQSEDYLKSQIKDIQNSVAFDLRTAEYSIVSLI
                     TDIKNLRDALSAMPAFQKDGKADEGKISAELKDVLELHRKSQMRADFVGAENSTGFHN
                     PREASRMLLQSVDMARQGQTQLVQIAAKNGITGFKTSNLGFEDMQKLNPGEIRYKVDL
                     NGHKAGDRYYEHDYINGNPPSNLIEDDKNLKPYNYNVVDKK"
     gene            complement(7900..8439)
                     /locus_tag="RPW04_001552"
     CDS             complement(7900..8439)
                     /locus_tag="RPW04_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HDX6295640.1"
                     /translation="MKVAVMLVDGFEEIEATTIIDVLRRAGIDAVFVGLNSDTAIGAH
                     NISMKADTAFDDINFDNFDMIVLPGGLPGAEYLAKSEKLQKVLKDFDEKDKFIGAICA
                     APWALSTSNVLGDSYTCYPGFEKVVAKGGYVSDKNVVIDGNIITSKGPATAMEFALEL
                     VKVLQGNEKYIEVKDGLLF"
BASE COUNT         3262 a         1406 c         1546 g         2637 t
ORIGIN      
        1 tatttatata ataactttca tttatacatt acttataaaa agcaatatta taaaatttat
       61 acaaaaaaat aagatatatt ttaaatttat cacatattgt tacaaattta cacatatatt
      121 tttataaatt tattcaaata ttaaatttaa tattacttat tattatattt ttttgtatta
      181 tttatattga taccttaaaa aaatataggg ggaaatatga taaacaaaac catagagttg
      241 gcaagtgagc tacaaaataa aattgtgcaa aatatctcta ggcacgaaaa agtttttcat
      301 caaaaaatga aaaaacttct gctaaatcca caaaacaaag taatgttaat agagctttta
      361 gaccgctcat ttagatgcaa agataaaaaa tccagttttg aactcataca atacacgcta
      421 aacaaatacg gtatagcgga ttttttcact tcttatgaaa gatttctgct tttagctttt
      481 ttaaatttag gcaaatttat gcctgatatc agcgttccgt tttttatatc tcatttaaga
      541 agtgaaacaa aagatatggt tttagatgcc aacgaaaata gtttaaaaaa gcatataaaa
      601 ctaagaaatg aagataatat aacattaaat ataaacctaa ttggggaaga agtccttagc
      661 gaagcagaaa gtttataccg aatacaaaag tacgaagagg cgataaaatc aaagtatata
      721 acatatatct ccatcaaaat aactactata ttttctcaaa taaacattat agactttgag
      781 tactctaaaa aagagatagt aaaaagatta gataggctct atcaactggc tttagaagaa
      841 gaaaaaataa gcggaatttc taaatttata aatctcgata tggaagaata cagggattta
      901 gaacttacgg tagaagcttt tatggatagt atttctaaat ttaatataaa agcaggaatc
      961 gtattgcaag cttatattcc agattcatat cactacctac aacgattatt tgaattctct
     1021 aaagagcgcg ttttaaaagg atttgcaccg ataaaaattc gccttgtaaa aggtgcaaat
     1081 aaacagagtg aagaagcaat atcttctcaa aaaggatggg ctttgccgac atttgataga
     1141 aaaatagata cggattcaaa ttacaaaaaa atgcttgatt tcgtattaag taaagataat
     1201 tacaaattta taaatatcgg tatcgctagt cacaatatct ttgagatagc tcacgcttat
     1261 atcaaaataa aagaagccgg cgcgactgag tcatttagct ttgagatgtt agaaggtatg
     1321 agtatccaat gttcatatga actatcaaaa ctgcatgata tcatacttta tgctcctgtt
     1381 tgcagcgaag aacattttaa taacgcagtc gcgtatctag taagaagact tgatgaaaac
     1441 agtagtacgg ataattttat gcgatatttt ttcaatctcg aagtaggaag ccgcgagtgg
     1501 aatacccaaa aagagttatt cttaaaatct atagataata tttcaaatat agacaactct
     1561 gcacgcagaa ctcaagatag aagcgttaat tcgcacacaa acggttcata tgatgagttt
     1621 gaaaacgagc cagatactga ttttatctta gctaaaaata gaaaatgggc acaagatata
     1681 aaatctaaat ttgaaaatat gcaaaattta gaaatctacc cagtagcaaa agatatccta
     1741 aaaaccgatg atatggactc ttataaagtt ttcgataaac ctcttaacag aaaaatagga
     1801 accgtgcatt tagcaaatat agatcagata aatagagcat taaaaacagc aaatgagtcg
     1861 aattacagcg atttaagtca tgatgaaatt tataaaatac tatcaaaagc agctgaaatt
     1921 tttagacaaa aaagaggaga tcttatagga atagccgctc tagaagtagg caaaacattt
     1981 ttagagctag atcccgaagt aagcgaagct atagactttt tagagtttta tccacactct
     2041 ttaaaaaagc taaaaaatga atatcaaaat attaaattta caccaaaagg cgtaggcgta
     2101 gttatagctc cgtggaattt ccctataggc ataacgaccg gaactatagc agctcctctt
     2161 gcagcaggaa atagagttat ttataaacca tcaagtcttt cagccataac cggatataaa
     2221 atatgcgaat acttttggga ggctggagtt cctaaagacg cgcttatatt tttacctgcg
     2281 caaggagcac tgatatcaga acatttacta acaaacgata gcataaaatt tactatacta
     2341 acaggttcgg aagatacggc gaaaactata ctagaagcaa atccttgctt gatgctaagt
     2401 gcagaaaccg gcggaaaaaa tgctacaata gttagtaaaa tggcagataa agatcaagcg
     2461 ataaaaaacg taatccattc ggctttttca aattcaggtc aaaaatgctc cgcaacttca
     2521 cttttgatac tagaagaaga ggtctataac gataataatt ttaaaaaatc tttagtagaa
     2581 gcagcttcat ctttacaaat aggaagtcct tttgagctta aaaacaaact tgcagcatta
     2641 gctagcaaac caagcacaaa actgataaaa gcgatcaatg agctaaaatc ttatgagcaa
     2701 tgggcattaa aaccgcaatt tataaatgat aatccgcatt ttatgactcc tgcgataaaa
     2761 tatggaacaa aagagggaga ttttacgcat atgacggagc tttttgcacc gattttaacg
     2821 gttatgtgcg caaaagatct aaatcatgcc ctgcatttag caaatagcac cggatatgga
     2881 cttacggccg gatttgaaag tttagatgaa agagagtggg aggtatttca tcaaaatata
     2941 gaagccggaa atatctatat aaataagcca acaacaggag ctatcgtact tcgtcaacct
     3001 tttggaggaa ttaaaaagtc tgccatagga tttggtagaa aagtcggaat atacaattat
     3061 atcacgcaat ttaccgatat cacagaagat ggatgcgata taaatttaaa accgtgcgat
     3121 atatcagata agttagaaaa actagatata caaggttatg aatcaaacat tttgaaaagt
     3181 ttaaaagagc tatcttttat agctaaaagc tatgcttatc ataatgaaaa tgagtttaaa
     3241 accaaaaaag actatgtaaa tataaccggc gaagataata tattttcata cacaaaagta
     3301 aaaaatacag gatacagaat cagcaaagac gatagtttaa gagatatttt tgcgatcatt
     3361 atggctcacg aaattttaga aataccttta tatataagtt ttgaagaaaa tagtaatata
     3421 caaatcgtat taaaaatagc agacgcttta gggatcgctt taaatttaaa acaagaagat
     3481 cttgtagatt tttctaagaa aatacatgaa tttgatagaa taagatatct gagtaaagca
     3541 tctaaaaatg atattgttta ccaaaaagcc gctaaaaatg caaagataat agcaaatgcc
     3601 aaacctctat caaacggtag atttgagctg ctttactacc acaatgaaaa atctttgagt
     3661 atctcgtatc acagatatgg aaatttaggc gcaagagctt tacaacatat gaaaggataa
     3721 aacatggaat cagtaaattt tagtatagaa atagcagtaa catttgtagc atactcagct
     3781 ttgatgttgt ttataggatt ttattttttc aaacaaaata aaagcacaga agactacttt
     3841 ttaggtggaa ggagcatggg gcctgcagta tctgccctat cttcaggagc ttctgatatg
     3901 agcggatggc tgctcatggg gcttcctgga gctttgtacg taagcggatt ttcacaaagc
     3961 tatatagcta taggtcttac tgtaggcgca tttttaaatt ggaaatttgt agcaaaaagg
     4021 cttagaattt atactagcgt agtagcaaat tctatcacta tacctgatta ttttgaaacg
     4081 agatttgatg ataaatctca tattttaagg atactttgtg ctatcgtcat tttgatattc
     4141 tttacatttt acgtatcggc aggattagtc ggaggagcta agctttttga aacaacattc
     4201 ggttttgcat acgaaaatgc tttgacaaca ggtactctaa tcatagttat atacacattt
     4261 ttaggtggat ataaagctgt ttgttggaca gatcttgtgc aaggtctgct tatgatgtcg
     4321 gctctgatca tagtccccat agctatgatc tatcatatag gcggttttgg tgaagctatt
     4381 aatataatag aaaatataaa accgggggca cttttaatga atgaaggcat aggcgttctt
     4441 ggactgatat caactcttgc ttggggactt gggtattttg gacagcctca tatattagta
     4501 cgttttatgt ctataagatc tgtcaaagat atacccactg ctacttttat aggcatatct
     4561 tggatggtta tttctctgat tggggcttgc cttataggag ttgtgggaat agcttacgtt
     4621 tataaattta atcttagttt gagtgatcct gaaaaaatat ttatcgtgat gagtcaactg
     4681 ctttttaatc cttggataag tggtatactt ctttcagcta ttttggctgc gattatgagt
     4741 acagcaagtt ctcagctttt ggtatctagc tctactatag ccgaggattt ttacagaagg
     4801 atatttaata aaacagcgtc ttcaaaaaca gttatgaact taggaagagt aggagtactg
     4861 atagtcgctc tagtagcttt tatcatatca acagataaaa actcgagcat attatctata
     4921 gtagcttacg cttgggctgg atttggcgct agttttggaa gcgttatgct attctcgctg
     4981 ttttggagca atatgactag actaggagct atagcgggta tgatagtagg agctataaca
     5041 gtagtagttt ataaaaactt tttatctgca tatttagata tttatgagat agttcccgga
     5101 tttatatttg catctttggc gatcattgta gtaagtttat gtacaaaagt aaggcccggt
     5161 acaaaagcag cttatgaaac tatgattaaa gagttataac aatatatcta gtatcaccga
     5221 ttttggtgat actattttat agataaatat taaaaattta aaaaatattt gtaaatttaa
     5281 gattcgaatt taatatctat aattccctaa taatcactat tttctgcata tattagccac
     5341 taatttaaat tattatttaa tattaagtat aaaattaaat aaattttaaa acttatttgt
     5401 ataaaataat taacaaataa aaattaaaca aaaaggaggg aatcgaattt gagacaatgc
     5461 aaagcattta caaatctttt tggcgtgttt atcgtgttgc tatttgtcct atttggcgta
     5521 ggcttttata cgttttataa cgccaaaggt acttcatact ttagcaacga tagtaaatcc
     5581 tgtaataact gtcatataat gaatgacgta tataacgact atctaaatgc gccacactct
     5641 aaaaaagtcg cgggcaagcc aagagcaagc tgtgtagact gccatttacc gcataatttc
     5701 atagataaat ggatcgcaaa aggcaaaagc ggtttgagcc atgcttactc atttacattt
     5761 aaattagatg agttaccgac aaatttaagc gcaaccaaca acagtaaaat gatggtgcaa
     5821 aataactgta tcgagtgcca cacagaaata gcatctaacg tgatcaactc aacaacaaat
     5881 ccacacaatg acagatctct aagctgcgta tcatgtcata ccggtgtcgg acataaaaga
     5941 ggattttaaa ataaaggaga aaatatgaat aaaaaaggtg ttatctattt tgcaattatt
     6001 gttgttatca tagcgatagc agcagtattg atgctaaata aagatattag taaaaaacaa
     6061 aatgaaggta caggaggcat agcctctaag gaatttgtag agcttagcga taataaccct
     6121 actttcgatc attggggtaa aaacttccca gattatcttg atatgtactt aactgtagaa
     6181 acagaaaaac ctgttagtac cgagttcgga ggtaacttag cttactctaa gcttatacgc
     6241 tatccacaac ttactatgtt atgggccgga tatccgtttt ctatagacgc aaatgaagaa
     6301 agaggtcact tctgggttca agtcgaccaa atggacacag caagaaacaa caaagacttt
     6361 ttaaatgcac acggatttgc agcatttggc ggacaacctg ctgcatgtat gaactgtcat
     6421 agcggctggt ctccttggct atacaaaaat gctgcaaaag gcgactggat agcatttaac
     6481 tctacaaaat actggaccat gataaaaaac gttccagcag taaatggtat ggaagaaaac
     6541 tctgttgaac acagcggtcc tcacggtggt aaaagaatgg gcttaacatg tgctgattgt
     6601 cacaatccaa aagatatgag cctaagactt actagacaag cagctataaa ctctttaatc
     6661 atgagaggtt atgaagcaga caaagaacaa ggcgtaaaag ccactagaga agagatgaga
     6721 actctagttt gtgcacaatg tcacgtcgag tattacttta aacctactgg tgaaaaagta
     6781 aaagtaatgg gtgagagcat agcaaaagac gctactaaaa catggtggaa cggaaaacaa
     6841 aaaacttatg acgaatttga ttcttggaga gacggaaata aacctacaca gatcgaagtt
     6901 gatggtatag agcttatata cccttggtcg tactggaaaa aaggaactcc atttagaatt
     6961 gaaatgttcg atgatcatta tgaagcggta cgcggtgtat ttgataaaga ctggcctcat
     7021 aaaataacaa aagctcctat gctaaaaatc caacacccag agtacgagct atacagcggc
     7081 ggcgtacatg ctgcaaacgg cgtaagctgc gctgattgtc atatgcctta tatcagaaaa
     7141 ggttctaaga aaatgacaaa tcacaatgtt acatctccgc ttgcaaacat aaatgcggct
     7201 tgtaaaactt gccatactca aagtgaagat tatctaaaat cgcagataaa agatatccaa
     7261 aactctgtag catttgatct tagaacagct gaatacagca tcgtaagtct tataacagat
     7321 atcaaaaatc taagagacgc tttaagtgct atgccggcat tccaaaaaga cggtaaggct
     7381 gatgaaggta aaatttctgc tgaactaaaa gacgtcctag aacttcatag aaaatctcaa
     7441 atgagagctg actttgtcgg cgctgagaac tctactggat tccataaccc aagagaggct
     7501 tcgagaatgc ttcttcaatc tgtggatatg gctagacaag gtcaaactca gcttgtgcaa
     7561 atcgctgcta aaaacggtat aaccggcttc aaaacatcta atctcggttt tgaagatatg
     7621 caaaaactaa atccgggcga gatacgctat aaagtagatc taaacggaca taaagcaggc
     7681 gatagatact atgagcatga ctatataaac ggaaatccac cttctaatct tatagaagat
     7741 gataagaatt taaaaccata caactataac gttgtagata aaaaataagc tcttaaaagc
     7801 tgattttgcc agacttcata tgaggtctgg ctttaaaaat ttatttagat aatcaaattt
     7861 atataactac aaaatttctt tttagttttt aaattcgtat caaaataaaa gtccgtcttt
     7921 tacttctata tatttttcat tgccttgtaa aactttaact aactctaaag caaattccat
     7981 agcagtagca ggtcctttag aagtaatgat attcccatct ataacaacat ttttatctga
     8041 tacatagccg ccttttgcaa ctactttttc aaaaccagga tagcaagtat aactatctcc
     8101 caaaacattg gaggtactaa gagcccatgg cgcggcgcaa atggctccta taaatttatc
     8161 cttctcatca aaatctttta aaactttttg aagtttttca cttttagcta aatattcggc
     8221 tccaggaagt ccgcccggta aaactatcat atcaaaatta tcaaaattga tatcgtcgaa
     8281 agcagtatcg gctttcatac taatattatg agcaccgata gccgtatcac tatttagccc
     8341 aacaaatacg gcgtctatac ctgctcttct tagcacatcg ataatagttg ttgcctcaat
     8401 ctcttcaaat ccatctacta acataacagc tactttcatt aatactcctt atatgaatta
     8461 aaaaattata gccaattgta gcaaatatca cacaatattt ttatgcattg tgctattata
     8521 tttgatatct tatgaaagga tttagtatgg aagtaaaaat attttactgc aactcttgag
     8581 ttaactttct cacaaaagct tctagtgtag aagacgaatt aaacaagaat ttccctagtg
     8641 cgaaagtttc taaagaggtt ggcgaaaaag gcggttttaa agttgaagct gatggaaaac
     8701 taatttatga ctataatagt ttccctagac cgaaatttcc agacaatgga gagataactg
     8761 ctacaatcat aagaaaattt aatctctaat ataacaaagc ctttgaattg taattcaaag
     8821 gctatttaaa tttaaatatc ctttttgata a
//
LOCUS       DAPPKW010000075         8816 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.075, whole genome shotgun sequence.
ACCESSION   DAPPKW010000075 DAPPKW010000000
VERSION     DAPPKW010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8816)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8816)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8816
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.075"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..288)
                     /locus_tag="RPW04_001553"
     CDS             complement(<1..288)
                     /locus_tag="RPW04_001553"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295641.1"
                     /translation="MRKIIYILLAVLTLCLIFQFYVCNYAKSMSNMILDSLKQNQNVV
                     ISNINQSNGIFSQNLSFDLDTKDLFLSSISKENNESLKINVNLKSSYFLFSI"
     gene            complement(285..854)
                     /locus_tag="RPW04_001554"
     CDS             complement(285..854)
                     /locus_tag="RPW04_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDX6295642.1"
                     /translation="MQEMLNSLSAYGYIILFFYTLGGGMVAIIAAGLLSYAGKLDLTT
                     CIVIAAISNFIGDSILFYLGRYNKQAILPYFKSHKRKLALAQILFKKYGDKIIFIKKY
                     IYGLKTLVPLAIGLTKYSMKKFSIINAICSILWAVSLGLFSYLAGDLVSRLANYFGDS
                     VFFFPVLMVVLLGIIWIYFSFATKKRNKI"
     gene            complement(863..1447)
                     /locus_tag="RPW04_001555"
     CDS             complement(863..1447)
                     /locus_tag="RPW04_001555"
                     /inference="COORDINATES: protein motif:HMM:NF016269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding SYLF domain-containing protein"
                     /protein_id="HDX6295643.1"
                     /translation="MKKIFLGIVFCFSILFANDELLLDSANAYKVVLQTNSVPSAQLI
                     EKSSAILVFPKFVKAGFILGATVGRGVMMVKQSDGWMPIGVKIGGASLGLQAGYESSY
                     LVIYVLKKSIIQDIKDTKFTVGADASISFMDSGANRGKMSDFTFSNDMYAYSNNSGFF
                     AGAKLGGSVITLDDRSKFDINSYGFNALIEAFMN"
     gene            complement(1460..3013)
                     /gene="rny"
                     /locus_tag="RPW04_001556"
     CDS             complement(1460..3013)
                     /gene="rny"
                     /locus_tag="RPW04_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HDX6295644.1"
                     /translation="MIEVVVGIGAGLIGIGAGYLVAKKINDANYSIFLEQAKAKAKAI
                     EFEAESILKDAKVKVNEAEFEAKKRYEEKGSRLQKEYNQKLDDISKKEHAILNEQEIL
                     KNSKDELEKSQNQAKTLYEEGLNLKIAYQDKLSETLKVLEHVAGLTEDEAKNMVLRKV
                     EEKSRAEIAHIVRKYEEEAKKEAKKRANYILAQATSRYAGEFAAERLINVVNIKNDEL
                     KGRIIGKEGRNIKTLEMVLGVDVIIDDTPHAIILSSFNLYRRAIATRVIELLVEDGRI
                     QPARIEEIHKKVCDEFEASILEEGENILIDLGISKVHPEIVKLIGKLKFRASYGQNAL
                     AHSLEVAHLSGIIAAETGGDEKLAKRAGILHDIGKALTHEYEGSHVDLGAEICKRYKE
                     HPVVINAIYAHHGHEEALSVECAAVCAADALSAARPGARREVLESFLKRVEEIESIAI
                     SKEGIKGAYAINAGREIRVIANAKLVNDDEAVLLAKEIAEEIQDKIQYPGEIKVNVIR
                     ELRAIEFAK"
     gene            complement(2946..3575)
                     /locus_tag="RPW04_001557"
     CDS             complement(2946..3575)
                     /locus_tag="RPW04_001557"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDX6295645.1"
                     /translation="MVVKFEKSSYRKFAKEKLRKIIKFRAKSFSYKINNELLNLIKHL
                     KVRNVLIFTPLSYEPDLLKLRRKLSKNHNIFIPFMVDKSLKMVKLRLPFKISKFNVKE
                     ANNSNAFLKSIDLAVIPVVGVDGNMARIGHGMGYYDRFFAELSYTPITVFVQIEDFYI
                     KEKICSLHDITCDFYITPTKKYIKKVSYDRSCSRDRRWTHRDRRWISCG"
     gene            3628..4182
                     /locus_tag="RPW04_001558"
     CDS             3628..4182
                     /locus_tag="RPW04_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HDX6295646.1"
                     /translation="MKSRSLIIAFLLIFAYGCSKEGKNEETAMEGSSSAVIGEDYSRA
                     FSLSLNSGETLYMQRNQKGFDIEDNNKAVLFAFFATWCPPCKAEIPYLVNLQDKFEKN
                     LRVVGVLMEDRTNDEIKEFIKMYNINYDIAYGDNNYFFAKALGGVVGIPFMVLYYPDG
                     KYANAYTGMVPLEMLESDVKKVIL"
     gene            4182..5051
                     /gene="ftsY"
                     /locus_tag="RPW04_001559"
     CDS             4182..5051
                     /gene="ftsY"
                     /locus_tag="RPW04_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDX6295647.1"
                     /translation="MFGFLKKGLEKTINAVASNRPQDKKITKDILEELLLEADVPYEI
                     TEEIIYYLPPKDIVSKDDLTRVMQTYFLYDNKKIEAKPFIQMIIGVNGAGKTTTIAKL
                     ANLYKTSGKSVLLGASDTFRAGAVEQIKLWANKLDVPIIASSQGHDPAAVAFDTISSA
                     VAKRYDYAIIDTAGRLQNQKNLASELEKIVRISNKAFEGAPHQKILVLDGTQGSAGVA
                     QAKAFNDIVKIDGVIITKLDGTSKGGALFGVARELELPILYIGVGERMEDLIKFDAKE
                     FVDTICDAIYLDK"
     gene            5051..6391
                     /gene="radA"
                     /locus_tag="RPW04_001560"
     CDS             5051..6391
                     /gene="radA"
                     /locus_tag="RPW04_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004318104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDX6295648.1"
                     /translation="MAKVKTIFECEACGNQQSKWMGKCPGCGAWESFVELSSEQIKAI
                     KEISKPSVSTANAKPITQIEIEKISRQSTGDAELDLVLGGGVVNGSLVLIGGSPGIGK
                     STLLLKIGSNLANSGEKVLYVSGEESSTQIKLRANRLDANSENLYLLTEINLDSILAE
                     ISKKEYKVLIIDSIQTLYSDKITSAPGSISQIREITFELMRLAKREDISVFIIGHITK
                     EGSIAGPRILEHMVDVVLYFEGDNSTELRMLRGFKNRFGSTSEVGIFEMKSSGLISSK
                     DATSKFFTRGIAISGSAITVTMEGSRALIVEIQALVCESNYPKRSSTGFDKNRLDMIL
                     ALLERKLEIPLGHYDVFINVTGGVKINETACDLAVVAAIISSFRNRPISKESLFIGEL
                     SLNGEIREIFNLDTRLKEASMQKFKNVVAPNKPIEDSKLKIFVAKEISQVLEWM"
     gene            complement(6395..7708)
                     /locus_tag="RPW04_001561"
     CDS             complement(6395..7708)
                     /locus_tag="RPW04_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HDX6295649.1"
                     /translation="MNTKNLKTGKLKSFIASSFLVLSDASVIYLSLILASYLVNLFSG
                     ESIYIGSLYVFYAINILLFFYSQLYTKRFDFWHESRVALRNCFFGAAIILFVLTSSNL
                     DFPRPVFVLSFLFMVFFLPISKFILKRVLYHTGLWKKPARIMGQSGEFEESVFENHYL
                     GYIKSDKDYETLFVCSNGLNAVMLNKIVEQNLKNHREIIFTPVLKEYDFSCSTIYSIF
                     NSRTSLFSIENSLLNPINALLKMLLDFIIFIILLPIFSIVLGVIVLAMKIAEPHEKVF
                     FAQNRLGKDGKIFKCFKLRTMKSDQSFMDEFLKNNPDEVAYYAKYHKFKNDPRITKIG
                     AFLRATSLDELPQLFNVIKFEMSVVGPRPYMINERHQMGKDRYLILALRPGITGLWQV
                     SGRSDTDFETRVKLDVWYVKNWSLYNDIIILIKTFKSVILRSGAK"
     gene            complement(7680..8795)
                     /locus_tag="RPW04_001562"
     CDS             complement(7680..8795)
                     /locus_tag="RPW04_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDX6295650.1"
                     /translation="MKKALVCDWLDKYSGAERCVESFTDIWNDFDIFSLVDFLNDTDR
                     SVILKGKKASVSFIQNLPFSKSKFRNYLPFFPYAIEQFDLNEYDLVLSSSHCVAKGIL
                     TNHKQFHICYMHTPIRYAWDMYHSYLNEHKLNSGLKAMLVKWFLYRIRMWDYVSANRA
                     DKIIANSKFIASRIEKIYSRKADVIYPPVDTDSFTLNSDKDDYYVTCSRLVAYKKVDV
                     IIRAFNKNGKKLVVIGDGEEMQNLKVLAKKNIELVGFQSSQNLKQYLQGARAFVFAAV
                     EDFGISVVEAMACGTPVIALKKGGACESVEEGVCGNLFCEQNEDSLNAAIVEFEKNID
                     KFDPNLIRQNALKFSKDKFKKTINEYVNNEYEKFKNG"
BASE COUNT         3012 a         1590 c         1318 g         2896 t
ORIGIN      
        1 aatagaaaat agaaaataac tgctttttaa atttacattt atctttaaac tttcattatt
       61 ttctttagaa atactactca aaaatagatc tttagtatct aaatcaaatg ataaattctg
      121 gctaaaaata ccattgcttt ggtttatatt tgaaataact acattttgat tttgtttaag
      181 cgagtctaga atcatatttg acatagattt ggcatagttg caaacataaa attgaaaaat
      241 taaacacaga gttaaaacag ctaataaaat atatatgatt tttctcatat tttgttcctt
      301 tttttagtcg caaaactaaa atatatccag ataataccaa gcaaaactac catcaaaaca
      361 gggaagaaga acacgctatc gccaaaataa ttagcaagtc tacttacgag atcgcctgct
      421 aaatagctaa aaagtcctag agaaactgcc cataatatag aacaaatagc atttataatg
      481 ctaaattttt tcatactata ttttgtaagc ccgatagcta aaggaactag agtttttaat
      541 ccataaatgt attttttaat gaaaattatc ttatctccgt attttttaaa taaaatttga
      601 gctaaagcta actttctttt atgcgattta aaatacggca aaatagcttg cttattatat
      661 ctaccaagat aaaaaagtat actatcacca ataaaatttg aaatagcagc gataactata
      721 caagtagtaa gatctagttt cccagcataa ctaagaagcc cggcagctat gatcgctacc
      781 atgcctcctc caagagtata aaaaaacaaa attatatacc cataagccga taggctattt
      841 aacatctctt gcatataaaa ccttagttca taaatgcttc tatcaaagcg ttaaatccgt
      901 aagaatttat atcaaattta gatctatcgt ctaaagttat aaccgaaccg ccaagttttg
      961 ctccggcaaa aaatccgcta ttatttgaat acgcatacat atcgtttgag aacgtgaaat
     1021 cactcatttt tcctctattt gccccgctat ccataaaact gatagaagca tcggctccta
     1081 ctgtaaattt agtatctttg atatcttgaa taatgctttt tttaagtacg taaataacta
     1141 aataactact ctcataacct gcttgcaaac caagacttgc gcctcctatt tttacaccga
     1201 taggcatcca gccatcactc tgttttacca tcataacgcc gcgcccgact gttgcgccta
     1261 gtataaatcc cgcttttaca aatttaggaa aaactagtat ggcgcttgat ttttctatta
     1321 gttgagcaga aggtacgcta tttgtttgca aaactacctt ataggcattt gcactatcta
     1381 gcaaaagttc atcatttgca aataatatac taaaacaaaa aactatacct aaaaatattt
     1441 ttttcaaatt tactcctatt tatttagcaa attctatagc cctaagctct ctgataacat
     1501 ttacttttat ttcacccgga tactgaattt tatcttgaat ttcttcagct atctcttttg
     1561 ctaaaagtac cgcttcatcg tcatttacaa gctttgcatt tgctataact cttatctctc
     1621 gaccagcatt tatagcgtaa gcacctttta ttccttcttt gcttattgct atcgattcta
     1681 tctcttctac tctttttaag aagctctcaa gaacttctct tctagctccg ggacgtgctg
     1741 cagaaagtgc atccgctgca catactgcgg cacattctac acttaaagcc tcctcatgcc
     1801 catggtgagc ataaatagca tttatgacaa ccggatgctc tttatagcgt ttgcaaattt
     1861 cggctcctaa atcaacatga cttccttcat attcatgagt taaagctttt cctatatcat
     1921 gtaaaattcc ggctcttttt gccaactttt catctccgcc ggtctctgct gctataatgc
     1981 cagataaatg tgcaacttcg agactatgag caagtgcatt ttggccataa ctagctctaa
     2041 atttaagttt tcctatcaat ttaacaattt ccggatgaac tttgctaata ccaagatcta
     2101 taagaatgtt ttcaccttct tcaagtatac ttgcttcaaa ctcatcacag acttttttat
     2161 gaatttcttc tattcttgca ggttgaattc ttccatcttc aaccaaaagt tcaatcactc
     2221 tagtagctat cgctcgtcta tatagattaa aactcgacaa aataatagca tgaggagtat
     2281 cgtctataat aacatctact ccaagcacca tttcaagagt tttgatattt ctgccctctt
     2341 ttcctataat acgaccttta agctcatcat ttttgatatt tacaacattt attaaacgtt
     2401 cagctgcaaa ctctcctgca tatctgctag tagcttgagc taatatataa tttgctcttt
     2461 ttttcgcttc ttttttcgct tcttcttcgt attttctaac gatatgtgct atttcggctc
     2521 tgcttttttc ttctactttt cttaaaacca tatttttagc ctcatcttca gtgagacctg
     2581 ctacatgttc tagtactttc aaagtttcgc taagtttatc ttgatatgca attttcaagt
     2641 tcaaaccctc ctcataaaga gtttttgctt gattttgaga tttttctaac tcgtctttgc
     2701 tattttttaa aatttcttgt tcatttaaaa tagcatgctc ttttttagag atatcatcta
     2761 gcttttgatt atactccttt tgaagtctac tgcctttttc ttcataacgt tttttagctt
     2821 caaactcagc ctcatttacc ttaactttag catcttttaa gatactttca gcttcaaatt
     2881 ctatggcttt tgcttttgct tttgcctgtt ctaaaaagat actataattt gcatcattta
     2941 tctttttagc cacaagatat ccagcgccga tcccgatgag tccagcgccg atccctacta
     3001 caacttctat cataactaac ctttttaata tatttttttg taggggttat ataaaaatca
     3061 cacgttatat cgtgtaaact gcaaattttt tctttaatat aaaaatcctc tatttggaca
     3121 aaaacagtta taggcgtata tgaaagctca gcaaaaaatc tatcgtaata ccccattccg
     3181 tgtcctatcc tagccatatt tccgtcaacc ccaaccacag gaataacagc tagatcaata
     3241 ctttttaaaa aagcatttga attgtttgcc tctttaacat taaatttaga tattttaaaa
     3301 ggcagtctca attttaccat ttttaaactt ttatctacca taaaagggat aaagatatta
     3361 tgatttttag atagttttcg tcttagtttc aacagatctg gttcatatga aagaggcgta
     3421 aaaataagca cattacgcac tttaagatgc tttattaaat ttaaaagttc attgttgatt
     3481 ttatagctaa aagattttgc tctaaattta ataatttttc tcaatttctc ttttgcaaat
     3541 tttctataac tacttttttc aaatttaacg accattttat aaactttttg tataatataa
     3601 tctcattttg accctttagg aaaccatatg aaatcaagaa gcttaattat agcattttta
     3661 cttatctttg catacggatg tagcaaagaa ggaaaaaacg aagaaacagc gatggaagga
     3721 agcagcagtg cggttatagg tgaagattat agcagagcat tttcactatc tttaaatagc
     3781 ggagaaactt tatatatgca aagaaatcaa aaaggctttg atatagaaga caacaacaaa
     3841 gctgttttat ttgcattttt tgcgacttgg tgtcctcctt gcaaagcaga aataccgtat
     3901 cttgtaaatt tacaagataa atttgaaaaa aatctaagag tagttggcgt tttaatggaa
     3961 gatagaacta atgacgagat taaagaattt atcaaaatgt acaatataaa ttacgatata
     4021 gcttacggcg acaataatta cttttttgct aaagctcttg gaggagttgt cgggatacct
     4081 tttatggtgc tgtattatcc agatggaaag tatgcaaatg catacactgg aatggttcct
     4141 ttggagatgt tagaatctga tgtgaaaaag gtaattttat aatgtttgga tttctaaaaa
     4201 agggtttaga aaaaactata aacgcagttg cctccaatag accacaagac aaaaaaataa
     4261 caaaagatat tctcgaagag ctactactag aagccgacgt accatatgaa atcactgaag
     4321 aaataatcta ctacctgcct ccaaaagata tagtaagcaa agatgatttg actagagtta
     4381 tgcagactta ttttttatat gataacaaaa aaatcgaagc aaaaccattt attcaaatga
     4441 taatcggagt taatggagct ggaaaaacaa caactatagc aaaacttgca aatttatata
     4501 aaactagcgg caaaagtgta cttttaggtg ctagtgatac atttagggca ggagccgtag
     4561 aacagataaa actctgggca aacaaattag acgtgcctat aatagcctca tctcaaggac
     4621 atgatcctgc agcagtagct tttgatacta ttagttcggc agtcgctaaa agatatgatt
     4681 acgcgataat agatactgca ggaagacttc aaaaccaaaa aaatttagca agcgaactag
     4741 aaaaaatagt tagaatatca aataaagcat ttgagggcgc tccgcatcaa aaaattctag
     4801 ttcttgatgg tacacaaggc agtgccggag tcgctcaagc aaaagctttt aacgatatag
     4861 ttaaaataga cggagttata ataacaaaat tagacggcac ttcaaaaggc ggagcactat
     4921 ttggcgtagc aagagagctc gagcttccta tattatatat aggcgttggt gagcgcatgg
     4981 aagatcttat taaatttgat gcaaaagagt ttgtagatac tatatgtgac gccatatact
     5041 tggataaata atggcaaaag ttaaaacaat atttgagtgc gaggcgtgcg gaaatcaaca
     5101 aagcaaatgg atgggtaaat gccctgggtg cggtgcttgg gaaagttttg tagagcttag
     5161 tagtgaacag ataaaagcta taaaagaaat ttcaaaacca tctgttagta ctgcgaatgc
     5221 aaaacctata acacagatag aaatagaaaa aatttcacgt caaagcacag gcgacgccga
     5281 acttgatctt gttttaggag gcggagtagt aaatggctca ttagtattaa taggcggaag
     5341 tccgggaata gggaaatcaa cccttctttt aaaaatcggt tcaaatttag caaatagcgg
     5401 tgaaaaagta ctatacgtaa gtggagaaga aagctctact cagatcaagc ttagagctaa
     5461 cagactagat gcaaatagtg aaaatttata tcttttaaca gagataaatc tggattctat
     5521 tttggctgaa atatcgaaaa aagagtacaa agtattgata atagactcta tacaaacttt
     5581 atatagcgat aaaatcactt ctgcccccgg atcaatctcg caaatacgcg aaatcacctt
     5641 tgagcttatg cgtcttgcaa aaagagagga tatatctgtt tttataatag gtcatatcac
     5701 aaaagaaggt tcgatagcag gaccaagaat acttgaacat atggttgatg tagtgctata
     5761 ttttgaagga gataatagca cggagcttag aatgctgcgt ggatttaaaa atagatttgg
     5821 ttctactagc gaagttggaa tattcgagat gaaaagttca ggactaatta gttctaaaga
     5881 tgctaccagt aaatttttta caagaggaat tgctataagc ggatctgcca taaccgtcac
     5941 catggaagga agtcgcgcac tcatagtaga aattcaagct ctagtctgtg aaagcaacta
     6001 tccaaaaaga agttcaaccg gatttgataa aaatcgcctt gatatgatac ttgctttatt
     6061 agagcgaaaa cttgaaattc cgcttgggca ttatgacgta tttataaacg taactggcgg
     6121 cgtaaagata aacgaaactg cttgtgatct agcggtagta gcggctataa tatcaagttt
     6181 tagaaacagg cctatcagca aagagagttt atttatagga gaactgagtt taaacggcga
     6241 aataagagag attttcaatc ttgatacaag gctaaaagag gctagtatgc aaaaatttaa
     6301 aaacgtagtt gctccaaaca aaccgataga agactcaaaa ttaaaaatat ttgtagcaaa
     6361 agagatatct caagtattag agtggatgta aaaactattt agcaccgctt cttaaaataa
     6421 cgcttttaaa cgtttttata agtatgatta tatcattata taatgaccaa ttttttacat
     6481 accatacatc aagctttacc ctagtttcaa aatccgtatc gcttctaccg cttacttgcc
     6541 aaagtccggt gattcccggt cttaaagcaa gtataagata acgatctttg cccatttgat
     6601 ggcgttcatt gatcatatac ggtctaggtc ctacaacgct catttcaaat ttaataacat
     6661 taaaaagctg aggcagctca tcaagtgaag tagcacgcaa aaaagctcct atttttgtaa
     6721 ttcgagggtc gtttttaaat ttatgatatt tggcgtaata agcgacctca tccggattat
     6781 ttttcaaaaa ctcatccata aaactttgat cgcttttcat agttctaagc ttgaaacatt
     6841 taaatatttt accgtcttta ccgagtctat tttgtgcaaa aaataccttt tcatggggct
     6901 ctgctatttt catagccaaa acaataactc ctaaaacgat agaaaaaata ggtaataaaa
     6961 taataaaaat tataaaatca agcagcattt taagcagcgc atttatagga tttaaaagcg
     7021 agttttctat gctaaaaagg ctagttctcg agttaaatat actatatata gtagagcaag
     7081 aaaaatcata ctcttttaaa accggagtaa atataatctc tctatgattt tttaaatttt
     7141 gctcgactat tttatttagc ataacagcgt ttaatccatt gctacataca aaaagcgttt
     7201 cgtaatcttt gtccgatttt atataaccta aatagtgatt ttcaaaaaca gactcttcga
     7261 attcgccgct ttgtcccata attctagccg gttttttcca taatccagtg tggtataaaa
     7321 ctctttttag tataaattta ctaatgggta aaaaaaacac cataaacaaa aaactaagta
     7381 caaaaacagg tcttggaaaa tctaagtttg agcttgtcaa aacaaacaaa ataatagccg
     7441 cgccgaaaaa acagttacgc aaagctactc tactttcgtg ccaaaaatca aatcttttcg
     7501 tatatagttg gctataaaaa aatagtaaaa tattaatagc ataaaaaaca tataaactac
     7561 ctatataaat actttcaccg ctaaacaaat ttactaaata actagctaaa ataagcgata
     7621 aataaattac cgaagcatca cttaaaacca gaaaagatga ggctatgaag ctttttagct
     7681 tacccgtttt taaatttttc gtattcatta tttacatact cgtttatagt ttttttaaat
     7741 ttatcttttg aaaatttaag tgcattttgt cttatcaaat ttggatcaaa tttatctata
     7801 tttttttcaa attctactat agctgcgttt aaactatcct cgttttgttc gcaaaataaa
     7861 ttaccgcaaa cgccctcttc tacgctttca caagctcctc ctttttttaa tgctataaca
     7921 ggagtaccgc acgccatcgc ctctactacg ctaataccaa agtcctctac ggcggcaaat
     7981 acaaacgctc ttgcaccttg taaatactgc tttaagtttt ggctgctttg aaaacctact
     8041 aattcaatat tttttttggc taaaactttt aaattttgca tctcctcgcc atcgcctatc
     8101 actactaatt ttttaccgtt tttgttaaaa gcccttatta taacgtcaac ttttttatag
     8161 gctaccaacc ttgagcaagt aacgtaatag tcatctttat cgctatttaa cgtaaaacta
     8221 tccgtatcta cgggcggata tataacatct gcttttcttg agtaaatttt ctctatccta
     8281 gaagctataa atttagagtt tgcaatgatt ttatcggctc tatttgcgct tacataatcc
     8341 cacattctaa tacgatacaa aaaccatttt acaagcatcg ctttaagtcc gctattaagc
     8401 ttatgttcat ttaaatacga atgatacata tcccacgcat accttatagg agtatgcata
     8461 tagcagatat gaaattgttt gtgatttgtt aaaattcctt ttgctacgca atgcgaacta
     8521 gatagcacaa gatcatattc atttaaatca aactgctcga tagcataagg aaaaaatggt
     8581 agataatttc taaatttaga ttttgaaaaa ggtaaatttt gtataaaact aacagatgct
     8641 tttttgccct ttaaaatgac gcttctatcc gtatcattta aaaaatccac aagcgaaaaa
     8701 atatcaaaat cattccaaat atcagtgaag ctttctacac atctttcagc tccgctatat
     8761 ttatccaacc agtcacaaac caacgctttt ttcaaattta aaccttcaga aatctt
//
LOCUS       DAPPKW010000076         8799 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.076, whole genome shotgun sequence.
ACCESSION   DAPPKW010000076 DAPPKW010000000
VERSION     DAPPKW010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8799)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8799)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8799
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.076"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            20..1360
                     /locus_tag="RPW04_001563"
     CDS             20..1360
                     /locus_tag="RPW04_001563"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDX6295651.1"
                     /translation="MKLFGTDGVRGRAGEKLNAMTAMRLAMAAGIYFRKNSITNKILV
                     GKDTRKSGYMIETAIVAGLTAVGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNP
                     FDDNGIKFFDSFGNKLSVEAEQAIENIFFHNEIIENNQKIGLEIGQSKRIDDVIGRYI
                     VHIKNSFPKSLTLKGLRVVLDVANGAVYKVAPTVFSELGAETIVLNDEPNGGNINDGC
                     GALHPENLAKEVKRLRADIGFAFDGDADRLVVVDENAKVVDGDALLGVLATYLDENKM
                     LDKKEIVATVMSNAALDDYLAKHKIKLLRSNVGDKFVLEMMKENGINFGGEQSGHIIF
                     SDFSKTGDGLVSALQVSACLLAKNKKASEIFGSIKAYPQKLSNLKIIEKRPLDELKGL
                     KELEDELKKLGIRTLFRYSGTENVIRLLLEGKDEALVTKKIAEVEKFFIKALNE"
     gene            1353..1796
                     /locus_tag="RPW04_001564"
     CDS             1353..1796
                     /locus_tag="RPW04_001564"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HDX6295652.1"
                     /translation="MSKVIFKFLSYFAAIFAVDQIIKWIFLNGFRYKGEFIDLVLVFN
                     KGVAFSMFEFLGTNLKYIQLALIAVLLGYLFGQKELLKSHTAAFGLLLGGGCSNILDR
                     FVHGGVVDYIFWHKWFNFAVFNFADMMIDLAILIILIQSFMHRKK"
     gene            1796..2158
                     /locus_tag="RPW04_001565"
     CDS             1796..2158
                     /locus_tag="RPW04_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NINE protein"
                     /protein_id="HDX6295653.1"
                     /translation="MQRNIYIAYALWFFLGGFGAHRIYCGKFLSGLLQLLLFWIGSLT
                     AIFLVGYIFLAIWGIWWLADLFFTSNWVEKLNSVNCIEKSISDSHKLKNVEKLYELYK
                     NGAMSYDEYLRRKDEILG"
     gene            2222..2668
                     /locus_tag="RPW04_001566"
     CDS             2222..2668
                     /locus_tag="RPW04_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HDX6295654.1"
                     /translation="MSYEAYLWVKWLHYAAFISWMAMLFYQPRLYVYHAEHIQNHGFV
                     DVVKIQESKLYNGIGWIAMIITILSGLSILIFEKPELMKQGYFHMKLLCVIILVAYHF
                     SLGYYLKQFKNNRCTKSGKFFRMYNEVPTIIMFIILYAMIIKAHLI"
     gene            2722..2797
                     /locus_tag="RPW04_001567"
     tRNA            2722..2797
                     /locus_tag="RPW04_001567"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2755..2757,aa:Val,seq:gac)
     gene            3089..3316
                     /locus_tag="RPW04_001568"
     CDS             3089..3316
                     /locus_tag="RPW04_001568"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295655.1"
                     /translation="MSKAVEKKEFIDGIDILEHEQLQSDIVGLGYLLFSFIDTLHHSV
                     PNRDQISAVNLIIDDILTKISKNLDDLVTKD"
     gene            3448..4686
                     /locus_tag="RPW04_001569"
     CDS             3448..4686
                     /locus_tag="RPW04_001569"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012798.1,HMM:NF026010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDX6295656.1"
                     /translation="MTTTIRQTTPLKDSDVKKLEYKGGKFSKYALGGVANLYLFIYKP
                     NLKGSSIKKYKIKINANFHSITDEYNQEMVYPDTSLNKARHKVRILQQELIQKAKESI
                     SPNFDKLANEYFKNRSNKIAIKTAEKEQGRYKNYIKETLGDKPINKISYKSIVDLLLN
                     IEAKFTRETSERVKMVINGIFKYSLSLGVIEANPTPTTSVFYNQQRVSKPRSAIIEPE
                     EIKELIRSINTYKNPTVKNALFFTMLTAQRQNQILNLKWSNIEVKNGITFIRFSSEIM
                     KMKRTHLTALSSQALEIIESQKTFRVNEYVFGMVNNKGIMSDCTMLQALNDMGYKGKH
                     STHGFRATFSTIMAENEHKHNLSSELIELCLAHSTTTIKGKVASAYDRSFKLEQQLMA
                     YEWYSNFINDLEPLQIAKFN"
     gene            4697..4912
                     /locus_tag="RPW04_001570"
     CDS             4697..4912
                     /locus_tag="RPW04_001570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDX6295657.1"
                     /translation="MVKQFYTPKELSDLTGISVSHLAHLRMDRFKYDEYGNFKAEYFP
                     FLKVGKKVLYPSKEVDAVLANLINKGN"
     gene            4912..5163
                     /locus_tag="RPW04_001571"
     CDS             4912..5163
                     /locus_tag="RPW04_001571"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295658.1"
                     /translation="MKTKHIYEILSVMLNTGEPVTATDFKISNANQYFVILESMRLVT
                     RVKSKEGNFKVAYFKDNEQKQKARDYLSKCGKSKNLMSF"
     gene            5246..6025
                     /locus_tag="RPW04_001572"
     CDS             5246..6025
                     /locus_tag="RPW04_001572"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295659.1"
                     /translation="MSILSQINQILATHNKNNPNLRLAVDTIRADFNRTTPIKSDTKI
                     NVFLNLPVTFNLKWYKLKKSNYDYVKLKKYLHKDELKTVYQLGNGHAFERIYYYYKKP
                     LDKSKTKATLVIYGLKQYHHCAPNVKLIDSLLDLVNNVSSVDLCFDRQEPFNVAALKS
                     IFTLETYQETTHYVNDTGIYSIPHICIYDKALKNGLREPLHRIEAKAIIRNYSVRNRV
                     IDPKNPKERLAEQLQQATQDFDDIIKLATNRPLIRLSRPYK"
     gene            7093..7404
                     /locus_tag="RPW04_001573"
     CDS             7093..7404
                     /locus_tag="RPW04_001573"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295660.1"
                     /translation="MNYKPIDDMIDFRNKHKDAFNDFIATFGGCFIYVPKFKSVVSPE
                     CKDYARELYENIYKSKVADKELKKKDAIKEIQRIILKEYNISVSFRYLFNAINPKYEQ
                     Q"
     gene            7578..7820
                     /locus_tag="RPW04_001574"
     CDS             7578..7820
                     /locus_tag="RPW04_001574"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295661.1"
                     /translation="MQSITLKADETLLKQIIEVSKALADKQNEPLEIKSNQAEPKTYN
                     SKAELKADYKNRIEEVINGSAKLYPIEELTKECEQW"
     gene            7814..8089
                     /locus_tag="RPW04_001575"
     CDS             7814..8089
                     /locus_tag="RPW04_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDX6295662.1"
                     /translation="MVKFSQRFKTELHIIFNFIAQNSKTRAGIFKDELLMQSKDLANL
                     PFRFRKSVTSDNDNVRDFIFKGYVIPFLIQDDTIIVLGIYKANEWKF"
BASE COUNT         3299 a         1338 c         1526 g         2636 t
ORIGIN      
        1 ttaaaaaaag aaggcaaaaa tgaagctttt tggaactgat ggagttagag gcagagccgg
       61 agagaagcta aacgcgatga ctgcgatgcg actagcgatg gctgctggaa tttactttcg
      121 taaaaactca attacaaata aaattttagt cggaaaagat accagaaaaa gcggatatat
      181 gatcgaaacc gcgatagtag ccggacttac cgcagttgga tataatgtta tacaaatagg
      241 tcctatgccg actccagcga tagcattttt gactgaagat atgcgctgtg acgccggcat
      301 aatgataagc gccagtcata atccatttga tgataacggt atcaaatttt ttgatagttt
      361 cggaaataag ctaagcgtag aggctgaaca agccatagaa aatatatttt ttcataatga
      421 aataatagaa aacaatcaaa aaataggtct cgaaatcggt cagtcaaaaa gaattgacga
      481 tgttataggc agatacatag ttcatatcaa aaactcattc cctaaaagtc ttactttaaa
      541 aggtttaaga gttgttttgg acgttgcaaa cggcgcagtt tataaagtcg ctccgaccgt
      601 atttagcgag cttggagcag agacaatagt tttaaacgat gaaccaaacg gcggaaatat
      661 aaatgatggc tgcggtgctt tgcatcctga aaatttggca aaagaagtta aaagattaag
      721 agccgatata ggatttgctt ttgacggtga tgccgataga cttgtggttg tcgatgaaaa
      781 tgcaaaagtt gtcgatggag acgctttgct cggcgttttg gctacttatc ttgatgaaaa
      841 taagatgctt gataaaaagg agatagtagc caccgtgatg agtaatgccg cacttgacga
      901 ctatcttgca aaacacaaaa ttaagcttct tcgttcaaac gtcggagata aattcgttct
      961 tgaaatgatg aaagaaaacg gcataaattt cggcggtgag cagagcggac acatcatatt
     1021 tagcgatttt tcaaagaccg gcgacggact tgtttcagct ttgcaagtaa gcgcttgtct
     1081 cttagctaaa aataaaaaag ccagcgagat attcgggagt attaaagcat atccacaaaa
     1141 actttcaaat ttgaaaatta tagaaaagag acctcttgat gagcttaaag gcttaaaaga
     1201 acttgaagac gagcttaaaa aactaggaat tcgcactctt tttagatatt ctgggactga
     1261 aaacgttata agacttttgc ttgagggaaa agacgaagca ttggtaacta aaaagatagc
     1321 tgaagtagaa aaattcttta taaaagcatt aaatgagtaa ggtaattttt aaatttttat
     1381 catattttgc agctatattt gccgttgatc agattataaa atggatattt ttaaacggat
     1441 ttagatataa aggcgagttt atagatcttg ttttggtctt taataaaggt gtggcatttt
     1501 ctatgtttga gtttttggga acaaatttaa aatacatcca gttagctctc atcgctgtcc
     1561 ttttgggcta tctttttgga caaaaagaac ttttaaaatc ccataccgcg gcatttggtc
     1621 tgcttcttgg cggaggctgc tcaaatatac ttgatcgatt tgtgcatggc ggtgtggttg
     1681 actatatttt ttggcataaa tggtttaact ttgccgtatt taactttgcc gatatgatga
     1741 tagatctggc gattttgatt attttgattc agagttttat gcataggaaa aagtaatgca
     1801 aagaaatatt tatatagcgt atgcgctctg gttttttcta ggcggttttg gtgctcatag
     1861 gatatattgc ggcaaatttt tgagcggatt gttgcaatta ttgctatttt ggatcggaag
     1921 tttaaccgct atatttttag ttggatatat atttcttgct atttggggaa tttggtggct
     1981 tgcggatctg ttttttacct ctaattgggt agaaaaatta aattcagtta attgtataga
     2041 aaaaagcatt agcgattctc ataaattaaa aaacgtagaa aaactatatg aattgtataa
     2101 gaacggcgct atgagttacg atgagtatct caggcgtaaa gatgaaattt taggctaaga
     2161 tttaatatta tttgaattta tatggtaaac taatggaaaa attttattaa ggagttacaa
     2221 aatgagctat gaagcttatt tatgggtcaa atggctgcac tatgctgcgt ttatctcttg
     2281 gatggcgatg ctattttatc agccacgact ttatgtttat cacgcagaac acatacaaaa
     2341 tcatggattt gtcgatgtag taaaaattca agaaagtaag ctttacaacg gtataggctg
     2401 gatagctatg ataattacca ttttaagtgg tctttcgata ctgatttttg aaaaaccgga
     2461 gcttatgaaa caagggtatt ttcatatgaa attgctttgt gtgattatct tagttgcgta
     2521 tcattttagc ttggggtact atttaaaaca gtttaaaaat aaccgctgta caaaaagcgg
     2581 aaagtttttt agaatgtata atgaagtgcc gacaataata atgtttatca ttctatacgc
     2641 tatgattata aaggcgcatt tgatttaaat ttgggtttta cccaaattta agcgatattt
     2701 ttatataatc caaactcttt tggttctata gctcagttgg tagagcatca ccttgacatg
     2761 gtgggggtca ctggttcgag tccagttaga gccaccactg aagttattct taatatttcc
     2821 ttacagttct cagaagtact tatttgcagc gtttgaaagg cttttgccat tcttgagaat
     2881 gcttacattt tcttagtttt ttatgcaaat ggcagctctt aaagggttac ctaaggggtt
     2941 acctagtgtt tttgcaatgg ggttaccaaa tatctccgca aagcaccaaa acaacgcttt
     3001 tgaaagttga gaaatgaaaa atatcagttt gctagtagct gcgataaaaa atctactaaa
     3061 atcaataaaa ttaatttaaa gggttacaat gagtaaggca gtagaaaaaa aagagtttat
     3121 tgatggtatc gatattctag agcacgaaca attacaaagt gatattgtag gcttagggta
     3181 tttattattc agttttatag atacgttaca tcatagcgta ccaaataggg accaaatatc
     3241 agcggtaaat ttgataatag atgatatttt aacaaaaatt agcaagaatt tagatgattt
     3301 agttaccaaa gattagacca atcaatggca gctcttaaag ggttacctaa ggggttacct
     3361 agtgtttttg caatggggtt accaaatatc tccgcaaagc accaaaacaa cgcttttgaa
     3421 agtttaggga ttaaaaaaag gagtgcgatg acaacaacga taagacaaac gacgccatta
     3481 aaagatagcg acgttaaaaa gctagagtat aaaggcggta aatttagtaa atacgcatta
     3541 ggtggagttg ctaatcttta cttgtttatc tacaaaccaa acttaaaagg cagtagtata
     3601 aagaaataca aaataaagat taatgctaat tttcactcca ttacagatga gtacaatcaa
     3661 gaaatggtct atccagatac cagcctaaac aaagccagac ataaagtcag gatacttcaa
     3721 caagagctta tacaaaaagc caaagaaagt atcagcccta attttgataa attagcaaat
     3781 gagtacttta aaaatagaag taacaaaata gcgattaaaa cagccgagaa agagcaaggg
     3841 cgttataaaa actacataaa agagacttta ggcgataaac caatcaacaa aataagttat
     3901 aaaagcatag ttgacttact gctaaatatc gaagcaaaat tcacaagaga aacctccgaa
     3961 cgtgtaaaaa tggtaataaa tggaatattt aagtactcat tatctttagg cgtgatagaa
     4021 gcaaacccaa cgcctaccac atcggttttt tacaatcaac aaagagttag taagccacgt
     4081 tcagccataa tcgaaccaga agagataaaa gagcttatac gcagtataaa tacgtataag
     4141 aatcctactg ttaaaaacgc actatttttt actatgctta cagctcaaag acaaaaccaa
     4201 atactaaatt taaaatggag caatatcgaa gtaaaaaacg gcattacttt tatacggttt
     4261 agttctgaaa ttatgaaaat gaaacgaaca catttaaccg ctctaagttc tcaagcctta
     4321 gagataatag aatctcaaaa aacatttaga gtaaatgagt acgtttttgg tatggtaaat
     4381 aataaaggaa taatgagcga ctgcactatg cttcaagctt taaacgatat gggctacaaa
     4441 ggtaagcact ctacacacgg ctttagagct acatttagta cgataatggc agaaaacgaa
     4501 cacaagcata atctaagtag cgagttaata gagctatgtt tagcacacag cacgacaacg
     4561 ataaagggca aagtagcaag tgcttacgat agaagtttta aactagaaca gcaattaatg
     4621 gcttatgaat ggtattctaa ttttatcaat gatttagaac cgttacaaat agctaaattt
     4681 aattaaaagg attaatatgg taaaacaatt ttacacccca aaagagttgt cagacttaac
     4741 aggtatcagc gtatcgcatt tagctcatct tagaatggat agatttaaat acgatgaata
     4801 cggcaatttt aaagcagagt atttcccgtt tcttaaagta ggtaaaaaag tactttatcc
     4861 atcaaaagaa gtggacgccg tgttggctaa tctaataaat aaagggaatt aatgaaaact
     4921 aaacatatct atgagattct atctgttatg ctgaatactg gtgagccagt aacggcaaca
     4981 gattttaaaa tatctaatgc taaccaatat tttgtaatat tagagagtat gagattagtt
     5041 acgagagtta aaagcaaaga aggtaatttt aaagtagcat attttaaaga taatgagcaa
     5101 aaacaaaagg ccagagatta tctttccaaa tgcggcaaaa gtaaaaactt gatgagtttt
     5161 taacaaaata atctcatcaa gctgaataat aaaaacaaaa aaggcggtta gagcaacaaa
     5221 actaaaccgc cttaaaagaa tataaatgag tattttatca caaataaacc agattctagc
     5281 aactcacaac aaaaataatc caaatttacg tttagccgtt gatacaataa gagctgattt
     5341 taatcgtaca actcctataa aatcagatac taaaataaac gtatttttaa acctacccgt
     5401 tacatttaat ctaaaatggt ataagctaaa aaagagcaat tacgactatg ttaaactaaa
     5461 aaagtatctg cataaagatg aattaaaaac agtttatcaa ttaggcaatg gacacgcatt
     5521 tgaacgcatt tactattact acaaaaagcc gttagataaa agcaaaacaa aagccacttt
     5581 agtgatttac ggtttaaaac agtatcatca ttgcgcacca aatgttaagc ttatagacag
     5641 ccttttagac ttagtaaata atgtttcaag tgttgattta tgttttgata gacaagaacc
     5701 ttttaatgtg gcagctctta aatcgatttt cacgctagaa acctaccaag aaacaactca
     5761 ttacgtaaac gatactggta tctactcgat accgcacata tgtatttatg ataaagcttt
     5821 aaaaaacggt ttgagagaac cattacacag gatagaagct aaggcgataa taagaaatta
     5881 ctccgtacgt aatagagtca tagaccctaa aaacccaaaa gaacgcttag ccgaacagtt
     5941 acaacaagcc acgcaagact ttgatgatat tatcaaacta gctaccaata gaccgctaat
     6001 aagacttagc agaccttata aataaacaat cttacttgct aaaccgctaa aggctaaaac
     6061 taatcaagct tattacgctt attatacacg cataaaaaaa tcaatgtgtt aaaatcaacc
     6121 ggttgatatc tcgctaattt cttgtttaag cttaaaacgt atattatgat ttgagttttc
     6181 aaaataatgg cgtttaagaa ttgaaaaaaa gaggaccctt tacatgattc cccgaagttc
     6241 ctagcgatga aaatatctta atgaaataaa acagctcaaa accttaccaa acaaagggca
     6301 ctacatagtc gcgactactt cgcaacttcc actttaagaa atcgctcccc taatggacca
     6361 gctaaaaagc cttaaaactc tctcaattct ttagcaaaaa tctcttaagg ttaaaactaa
     6421 ataatagtaa tatgatgaca tatttcggca aaaatgacag ccctagccat tgcaaaaatg
     6481 acagggggga gtgacaacat attatttgac aaaatatccc ctaaatgcta agatactaaa
     6541 ataataacta agggacacaa atgatagcca ttttaataga cttatttaac ttattctatt
     6601 cggtttttaa tcttgttgta atactattcc cgtttttagt atttgggtgg cttgtaagct
     6661 ggatagtgtt tagataacac gatagtgaat tgctctttaa gtcggacaaa ttttcggcta
     6721 agactacatc attgccctat ttaaatcaaa atatctttca ataaaaaagt aaaggtactg
     6781 gcaaaaatat catttcatac gggggtcgcc taagccgcac cccctttcta acattgaaaa
     6841 ttatttttga aaaaaggaca gtttgcaact tagtcgtatt taactaaata cggtaaatag
     6901 gctatttgaa taacttaatg atttttcaaa gtgtactatt ttacttgcta aaccgctaaa
     6961 ggctaaaact agacaatctt ttttagctta ttacgctatc atacacgcat aaaaaagtaa
     7021 aaaggtaagc atatgcaaag tatcacacta aaatgcaatg aaaacgcttt taaaagcaaa
     7081 taaaggctaa atttgaatta caagcctatt gatgacatga tagattttag aaataaacat
     7141 aaagacgctt tcaatgattt cattgcaacg tttggcggtt gcttcattta cgtgcctaag
     7201 ttcaaaagtg ttgtatcgcc tgaatgcaaa gactacgcta gagagttgta cgaaaacatt
     7261 tacaagagta aagtagcaga taaagagtta aaaaagaaag acgccataaa agagatacaa
     7321 aggattatcc ttaaagaata caatatttcg gttagtttta ggtatctttt taatgcgata
     7381 aatcctaaat acgaacaaca gtgaataatg taaccgccat aaaaacggag ttagacgctc
     7441 aaagtgaata ccaagcattc gcttttaaca aagaggcaaa taaagcaacg atatctagaa
     7501 tctaaattta aaaaactaat caagctttta tcttattatg gtattattca tacataaaaa
     7561 agtaaaaagg taagcatatg caaagtatca cactaaaagc agatgaaacg cttttaaaac
     7621 aaataataga agtcagtaaa gcactagcag ataaacaaaa cgagccttta gagataaaaa
     7681 gcaaccaagc cgagccaaag acctacaaca gcaaagccga gttaaaagcc gactataaaa
     7741 acagaattga agaagtgatt aatggcagtg ccaagcttta ccccattgaa gagctaacca
     7801 aagaatgcga acaatggtaa aatttagtca acgctttaaa acagaattgc atattatttt
     7861 taactttatc gcacaaaata gcaaaacaag agctggaatc tttaaagatg agctattaat
     7921 gcaaagcaaa gatttagcta atttgccatt tagatttaga aaatcagtta cgagcgataa
     7981 tgacaacgta agggatttta tttttaaagg ctatgttata ccgtttttaa ttcaagatga
     8041 cacaataatc gttttaggca tatacaaagc caatgagtgg aaattttaat tcttaaatat
     8101 tcttgcttta tctctttagt ttattttaac cttttaaaat gtataatttt aaatagccat
     8161 taaggatggt taaaaccgcc ttctcttaat tattaataaa gtttcgacac taaaattaat
     8221 aaaataatta aaatggctat aaccattttt ttctccttgc tttaaaaagc aaggggcaat
     8281 ctttttagat atgaaactca caaaccctaa gcgttaaaat ctaactaaaa tcatctaacc
     8341 ttaaatgtgc gaaaagtgta gttttcaata caaaatttaa taacatctgt ttcatttatc
     8401 tgctaaatag gttctttatg tgaattgatg gtattttaca atattcattg aaaattattt
     8461 aatatcataa aataagcata taaactttaa atatcacaca aatattatta attaatatta
     8521 ttaaaatata aattaatatt attaaaaact taatattaac tttatcgata aattagcgta
     8581 aataaaacag taataaatca agcgttaata aaagttaatg taaatattca gacataatta
     8641 agttgttttt gctattattt cagcattgat ttcgtgtagt tacttatagg ctattttaga
     8701 cttttgcact gtaaaaatcg atatttaata actttggtaa ttcagttaga gccaccattt
     8761 atacttatat atctaaaaat taattaaact tttaaattt
//
LOCUS       DAPPKW010000077         8552 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.077, whole genome shotgun sequence.
ACCESSION   DAPPKW010000077 DAPPKW010000000
VERSION     DAPPKW010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8552
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.077"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..503
                     /locus_tag="RPW04_001576"
     CDS             <1..503
                     /locus_tag="RPW04_001576"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295663.1"
                     /translation="KSNYVSNDFNGVASFDMGRNYFGGHIGLGRIFNINDTNIIDLYS
                     KILYSEQGSKAVYIRDEGFEFDTAKSIRLSLGARYNYELNDGTNLYGGAAYEREFDGK
                     QKTYSIVANANIDAPGASGDSAMLEIGASITPTNYKAFNANFNLQLFTGVKSGISGGL
                     KALYKF"
     gene            complement(611..971)
                     /gene="ssrA"
                     /locus_tag="RPW04_001577"
     tmRNA           complement(611..971)
                     /gene="ssrA"
                     /locus_tag="RPW04_001577"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(1008..1424)
                     /locus_tag="RPW04_001578"
     CDS             complement(1008..1424)
                     /locus_tag="RPW04_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphorelay protein"
                     /protein_id="HDX6295664.1"
                     /translation="MGLLKQLEIEYELDIIDEFLTHFGIMNGLLDGLIINLGNKDKFD
                     ASANELGRIFHNIKSACEYLKLDAIIKLTSIAEDIVSELKSHKNTGTIASNEAIDWLL
                     EVSSQLELYRQDLENDEIYFHILRPSIINIPTNLFA"
     gene            1511..2305
                     /gene="panB"
                     /locus_tag="RPW04_001579"
     CDS             1511..2305
                     /gene="panB"
                     /locus_tag="RPW04_001579"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HDX6295665.1"
                     /translation="MKKVTINDLFMMKNREKIVMITAYDALFAGLFDDYVDMILVGDS
                     LNMSFGGKNETIGLSVDDMIYHTKAVQNGAKKAFLVVDMPFGSACTPQIALKNAIKIY
                     KKTGCDAVKIEGTKEMADTIKLLSQNGIIVMSHIGLKPQMSRFEGGYKIKGKDELSAK
                     SILEDAIVLESAGASLFLLEGIVSSVASEISQKLKVPTIGIGSGASCDGQVLVWSDAF
                     GFFDEFKPKFVKRYLEGATLIKNALKEYADEVKNSKFPSSQYEYTK"
     gene            2289..2600
                     /locus_tag="RPW04_001580"
     CDS             2289..2600
                     /locus_tag="RPW04_001580"
                     /inference="COORDINATES: protein motif:HMM:NF012790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDX6295666.1"
                     /translation="MNIPNENIVDIRLPSEWMEYGILEGSKLITYENASGKINPMFVR
                     LVEQHFKKDDEFYLMCATAKRSKAALKLLQNNGFKNVKEIKGGAYYYEKMGAKFEKFA
                     L"
     gene            2610..3641
                     /gene="ruvB"
                     /locus_tag="RPW04_001581"
     CDS             2610..3641
                     /gene="ruvB"
                     /locus_tag="RPW04_001581"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDX6295667.1"
                     /translation="MDRIVEIEKVSFESEYEVTLRPLTFEEYIGQEKIKSNLKVFIKA
                     AKKRLESLDHVLFYGPPGLGKTTLAHIIANEMGANIKISSAPMIEKSGDLAAILTNLE
                     EGDVLFIDEIHRLSPAIEEVLYSAMEDFRLDIIIGSGPAAQTIKIDIPKFTLIGATTR
                     AGMISAPLRDRFGMKFRLQFYTDNELARIISIAASKLGKNSTKEASLEIAKRSRGTPR
                     IALRLLKRIRDFAEVSDENSISKDRAKSSLDSLGVNDLGFDEMDLKYLDILVGSKRAL
                     GLSTIAAALSEDEGTVEDVIEPYLLSNGYIERTAKGRILSFKSYSVFGITPPMHITEE
                     KQNKGLFNE"
     gene            3634..4737
                     /locus_tag="RPW04_001582"
     CDS             3634..4737
                     /locus_tag="RPW04_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDX6295668.1"
                     /translation="MNDLNFKNNLNSQSRHPTNRLFFGFFILFLLCWVLFLFQSYLLT
                     ISIGVLLAVATSNIQNAFLRFTNGKAALSAAITTLFLCTVFFLPLIYAVIEIVKNAAN
                     FDIKSISHTIDYIKNFDLKLPQALSFLEPKIKELIAGIDLPTLIRKVLSYAKGSLEKS
                     ANFLIDISFIMLFLFFSHFYANFFKSYIKKVSPISKYELEAIFLEVANTMSVVFYSTI
                     ANMILQGFLFAIIASFYGFDGLLFGVLFAFSSLIPVVGGALVYIPLSVFEFSLGDTKA
                     AIIILVYSIVVISTLADNFVKPLVIKFINEKLLKTPAKMNELLIFFSMLAGLSSFGFW
                     GIVLGPAIVTLLSATLRVYAMLKSSDLDSKAKE"
     gene            4800..5807
                     /locus_tag="RPW04_001583"
     CDS             4800..5807
                     /locus_tag="RPW04_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009293776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDX6295669.1"
                     /translation="MDKKSLKELKSLKVDTLDLKNLIRIDYSAATFFAKHYNCPKLIN
                     SNDKFDKIFALVSDKYILNLQIIKFKKSNLIEQIGKNIINLKNELVSFCIFLGEFLFN
                     LTKSLLNPFTVRFKELSNHFYSAGISAVFIVCLTSFLIGIVLAYQGATMLENFGASIY
                     VVDIMGIMTLREVGPLIAAIVVAGRSASSYTAQIGVMKITDELEAMKTMGFEPFRFIV
                     MPRVLALILAMPFIVFLANAVSIFGQMMVCNWYLDLSFSDYLERFRSSIALRHFWVGL
                     FKAPFFGAVIALIGCKRGFEVSGSTNSVGELTTRSVVNAIFWIIALDAIFSIIYTELK
                     I"
     gene            5849..6544
                     /locus_tag="RPW04_001584"
     CDS             5849..6544
                     /locus_tag="RPW04_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDX6295670.1"
                     /translation="MHDHVSFQINDGEIYGLLGGSGSGKTTLLKTLIYLKEPTSGDIF
                     WDNQNLWQANLQTRDELRLKMGVMFQFGALYSGMNVLDNIGILLKEYSDYDEQDINEI
                     AKMWLIKVGLSKEAMSLYPSELSGGMKKRVALARSLALSPKVLFLDEPNSGLDPMSAR
                     ALDKLICTIRDSLGITVVMVTHDIDSIFGILDRFLIIDNHKIAYEGDLKGALEYKENP
                     LRELFTMRSLNGK"
     gene            6534..7448
                     /locus_tag="RPW04_001585"
     CDS             6534..7448
                     /locus_tag="RPW04_001585"
                     /inference="COORDINATES: protein motif:HMM:NF014523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HDX6295671.1"
                     /translation="MENKNSYFIAGLFFCIVLAMLTFFVLYMNIKGNEGETRYYYIET
                     KELPNGIKNDSQVRFIGVPAGIVKDIYFSDPKSATIEIKMSLKKDLPIKRDSVAVVEV
                     QGISGIAYINISKGSDSAEVFSPNDKPSIKMGQGLLAKIGDSAINLGSRIDASLSKID
                     RALSDENLNNLSNSIASLNTILSNLAKVSNEQNSNNINKLLENSVAISNRVSAIKFEE
                     LNKNAADFLNIAKKSAKSFEDTQTLLMSKLSSGEYDFKSFLTPTLSATNDTLLQLDSL
                     IMELKNTLFRLEDNPYEFFFKDTSGDKK"
     gene            7701..7982
                     /locus_tag="RPW04_001586"
     CDS             7701..7982
                     /locus_tag="RPW04_001586"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295672.1"
                     /translation="MIYKALILYLDQNCHIKERSDAQVSLEITLLDIGVTQNTAYIEI
                     LAKLTDKDKIILNKILSAKTTTTSSVAEALNASLETVFGDLHSILNEML"
     gene            complement(7984..8388)
                     /gene="ybeY"
                     /locus_tag="RPW04_001587"
     CDS             complement(7984..8388)
                     /gene="ybeY"
                     /locus_tag="RPW04_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDX6295673.1"
                     /translation="MIICNDSYPSVLDKIADMLTKAEVELVFVSNEEMREINRDKRGM
                     DKTTDVLSFPLTYVPHFPIGSIVINTDLASSKALELGHSTDDEIALLFTHGLLHILGF
                     DHENDDGEMRRKEISIMEHMGLPKSLIVRNGC"
BASE COUNT         2868 a         1371 c         1594 g         2719 t
ORIGIN      
        1 taaaaagtaa ttatgttagt aacgacttta atggggtagc gtcatttgat atgggtagaa
       61 actactttgg aggacatata gggcttggca ggatttttaa tataaatgat acaaatatta
      121 ttgatttata ctcaaagatt ctttattccg agcaaggaag caaagcagtg tatataagag
      181 atgaagggtt tgaatttgat actgctaagt ctataagact aagtttaggc gctagatata
      241 actatgagtt aaacgacggt actaatctat atggcggagc tgcttatgag agagaatttg
      301 acggcaaaca aaaaacatat agcatagtag caaatgcaaa tatagatgct cccggagctt
      361 ccggagatag tgctatgctt gagatcggag ctagtataac tcctacaaac tataaagcgt
      421 tcaatgcaaa ttttaattta cagctattta ccggagtaaa aagcggtatc tcgggcggct
      481 taaaagctct atataaattt taatttaatg ttgtaattta taaatttagt gatagcagat
      541 tgatgatgta tcggtctgct ttaaatatat gatgtttatt taaatttaat aaaataagtt
      601 aataatttaa tggtggaggt gtgcaggatc gaactgcagt ccaaaaataa tagattcata
      661 gcctctacat gcttagcaga agtgagagtt tcacttagct tcgctcactt cccaaagcgt
      721 ttagctaagc taagactaaa tttcaattat agattcgtca attctttaat ctaagctatc
      781 aaaaattacc cgctaaagct tctagatagc attgaagttt cgcagggctc aactggactt
      841 acgcagcttt agcgtaagca ggagcgaatt taacgttgtt tgcgtttaat tttattttgg
      901 gctttttaag ctttgcccaa agctgcatgc cgccgtgact ccactactcc tgtcgaagcc
      961 aagtcacccc cataagttgg cgattataca taaaatttaa tttattgtca agcaaataaa
     1021 tttgtaggaa tattaattat actaggacgt aaaatgtgaa aataaatctc atcattttcc
     1081 aaatcttgcc tatataattc aagctgacta gaaacttcta aaagccagtc tatagcttca
     1141 tttgacgcta tagttccggt atttttatga ctttttagtt cagatactat gtcttctgct
     1201 attgaagtta gttttatgat cgcgtctagc tttaagtact cacatgcgga tttaatattg
     1261 tgaaatatcc ttccaagttc attcgcgctt gcatcaaatt tatctttgtt gcctaaattt
     1321 ataatcaacc cgtcaagcag accgttcatt atgccaaaat gagttaagaa ctcatctatg
     1381 atatcaagtt cgtattcgat ttctagctgt tttagtaatc ccatttttat atttcctact
     1441 tatattcaga caaattgtag caaattttag ataaaatcag acaaaaaaat gagaaaaata
     1501 aggaaaaata ttgaaaaaag taaccataaa cgatctgttt atgatgaaaa acagagaaaa
     1561 gattgttatg ataactgctt atgatgctct gtttgcaggg ctttttgatg attatgtgga
     1621 tatgattttg gtcggcgata gtttaaatat gagttttggt ggtaaaaatg aaactatagg
     1681 actaagcgtt gatgatatga tctatcatac gaaagctgtg caaaatggtg ctaaaaaagc
     1741 atttttagtt gtagatatgc cctttggctc ggcttgcacg ccgcaaatag cactaaaaaa
     1801 tgctataaaa atctataaaa aaacaggctg tgacgctgta aaaatagaag gcacgaaaga
     1861 gatggcggac accatcaaac ttcttagcca aaatggcata attgttatgt ctcacatcgg
     1921 tttaaaacct caaatgtcac gttttgaagg tggatacaag ataaaaggca aagacgagct
     1981 aagcgcaaaa agcatattag aagacgctat cgttttggag tctgcgggag ctagcttgtt
     2041 tttgctagaa ggaatcgtaa gtagtgttgc gagcgaaatt tctcaaaaat taaaagtgcc
     2101 gactatagga ataggaagcg gtgcttcttg tgatggacaa gttttggtat ggagcgatgc
     2161 gtttggcttt tttgatgaat ttaaaccaaa atttgtaaaa aggtatttag aaggtgcgac
     2221 tcttataaaa aatgctctaa aagagtatgc ggacgaagta aaaaatagca aattcccaag
     2281 tagtcagtat gaatatacca aatgaaaata tagtagatat aagacttcct agcgaatgga
     2341 tggagtacgg aattttagag ggttcaaaac tcattactta tgaaaatgca agcggaaaga
     2401 taaatcctat gtttgtacgc ttggtggagc agcattttaa aaaagacgat gagttttatc
     2461 ttatgtgtgc gaccgccaaa agatcaaaag ctgctttaaa actactgcaa aacaatggtt
     2521 ttaaaaatgt taaagagata aaaggcggcg cttattacta cgaaaaaatg ggtgctaaat
     2581 ttgaaaagtt tgcgctttaa ggataagaat tggataggat agtcgagata gaaaaagtca
     2641 gctttgaaag cgaatatgaa gtaactttaa gaccattgac ttttgaagag tatataggtc
     2701 aagaaaaaat caaatcaaat ttaaaagtat tcataaaagc cgctaaaaag cgccttgaaa
     2761 gcttagatca cgtactattt tatgggcctc ctggacttgg aaagactact cttgctcata
     2821 ttatagcaaa cgaaatggga gcaaatatca agatcagctc cgctccgatg atagaaaaaa
     2881 gcggagattt ggctgctatc ctcacgaatt tagaagaagg cgatgtgcta tttatcgatg
     2941 aaattcaccg cttaagtcct gccatagaag aggtgttata ctctgctatg gaagatttca
     3001 gacttgatat cattataggt tctggacctg cagctcaaac tataaaaatt gatattccta
     3061 aatttactct tataggagcc actacaagag caggcatgat ctcggctcct cttagagata
     3121 gatttggtat gaagtttagg ctgcaatttt acaccgataa cgaattagct cgtattatct
     3181 ctatagctgc ttctaaacta ggtaaaaata gcactaaaga agctagctta gagatagcaa
     3241 aacgcagccg tggaacccct cgtatagctt taagactact taaacgtatt agggattttg
     3301 ctgaagtcag tgatgaaaac agtatcagca aagatagggc taaaagttct cttgatagtc
     3361 ttggggtaaa tgatcttggt tttgatgaga tggatttaaa gtatttagat atattagtag
     3421 ggtctaaaag agctcttggc ctttcaacta tagctgctgc tttgagcgag gatgagggca
     3481 ccgtagaaga tgttatagag ccttatttgt tatcaaacgg atatatagaa agaaccgcaa
     3541 aaggtcgtat actaagcttt aaaagctata gcgtttttgg tataactccg cctatgcata
     3601 taaccgaaga aaaacaaaat aaaggtctgt tcaatgaatg atttaaattt taaaaacaac
     3661 ctaaattctc aaagtcggca tcctacaaat cgtctatttt ttggtttttt catacttttt
     3721 ttgctttgtt gggtactatt tttatttcaa tcatatcttc ttactattag tatcggagtg
     3781 cttttagcag ttgctacttc aaacatacaa aacgcatttt tacgttttac aaacggcaaa
     3841 gccgcgcttt cagccgccat tactacgcta tttttatgta cagtattttt cttgccgctc
     3901 atatacgccg ttatagagat agtaaaaaac gctgcgaatt tcgacattaa aagcatatct
     3961 cacaccattg attatataaa aaattttgat ttgaaattgc ctcaagctct ctcattttta
     4021 gagcctaaaa taaaagaatt gatagccggt atcgatctgc ccacgttgat tagaaaagtt
     4081 cttagctatg caaaaggaag tttggaaaaa agtgctaatt ttcttataga tatcagcttt
     4141 atcatgcttt ttctattttt ttcacacttt tacgcaaact tttttaaaag ttatatcaaa
     4201 aaagtttctc ctatatcaaa atacgagtta gaagccatat ttttagaagt tgcaaatacc
     4261 atgagcgttg tgttttactc tactatagca aatatgattt tgcaaggctt tttatttgct
     4321 attatagcta gtttttacgg ttttgacgga ctgctttttg gcgtactgtt tgcatttagt
     4381 tcgcttattc ccgtagtagg aggcgcttta gtttatattc ctcttagcgt gtttgagttt
     4441 tctcttggag acactaaagc ggctataata attttagtat attccattgt tgttatatcc
     4501 actttagcag ataacttcgt aaagccgctc gttattaaat ttataaatga aaagcttctt
     4561 aaaacaccgg ccaaaatgaa tgaattatta atatttttct ctatgttggc aggtctttcg
     4621 agttttggat tttggggaat tgttcttgga ccggctatag ttactctttt atcggcaacg
     4681 cttagagttt atgctatgtt aaaaagcagc gacttagact caaaggcaaa agagtgaaaa
     4741 agtacaactt tactttagat aatgcggttt taaaactaga tggggaattt gattatacta
     4801 tggataaaaa gagcttaaaa gagcttaaaa gtctcaaagt agacactcta gatctgaaaa
     4861 atctaatccg catagactat agcgctgcta ctttttttgc taaacactac aactgtccaa
     4921 aactcattaa ctcaaacgat aaattcgata aaatattcgc tctagtaagc gacaaatata
     4981 ttttaaatct acaaattatt aaatttaaaa aatcaaattt aatcgagcaa ataggcaaaa
     5041 acatcataaa tttaaaaaac gaactagtct ctttttgcat atttctaggt gagtttttat
     5101 ttaatcttac aaaatcatta ttaaacccgt ttaccgtaag atttaaagag ctttcaaacc
     5161 acttttatag tgcagggata agtgctgttt tcatagtctg tcttactagc tttcttattg
     5221 gtatcgtgct tgcttatcaa ggcgcaacaa tgcttgaaaa cttcggcgct agtatatacg
     5281 tggttgatat aatgggtatt atgacgcttc gtgaagtagg acctcttata gcagctatcg
     5341 tagtagctgg acgatcagct tctagttaca cggctcagat cggagttatg aaaataacag
     5401 atgagttaga agccatgaaa actatgggtt ttgagccgtt tagatttatc gttatgccgc
     5461 gtgttttggc tcttattttg gctatgcctt ttatagtatt tttagcaaac gcggtaagta
     5521 tttttggaca aatgatggtt tgtaattggt atcttgatct tagtttttca gactatctag
     5581 aaagatttag atctagtatc gctcttaggc atttttgggt gggattattt aaagctccgt
     5641 tttttggagc ggttatagct ctgataggat gcaaaagagg attcgaggtt agcggaagca
     5701 caaacagcgt aggtgagctt actacaagaa gcgtggtaaa tgcgatattt tggattattg
     5761 ctttagatgc tattttttct attatatata cggagctaaa aatttgataa aagctataga
     5821 tttatgcact gcttatggag aaagaattat gcacgatcat gttagctttc agataaatga
     5881 tggcgaaatt tacggacttt taggcggtag cggtagcggt aaaacaacgc ttttaaaaac
     5941 tcttatctat ctgaaagaac ctactagcgg ggatattttt tgggataatc aaaacctttg
     6001 gcaagcaaat ttacaaacca gagatgagct tagactgaaa atgggcgtta tgtttcagtt
     6061 cggcgcactt tacagcggta tgaacgtact tgataacatc ggtatattgc taaaagaata
     6121 tagcgattat gacgagcaag atatcaatga aatagccaaa atgtggctca taaaagtagg
     6181 tctttcaaaa gaagctatga gcttgtatcc aagcgagctt agtggtggaa tgaaaaagcg
     6241 cgtagcctta gctcgttccc ttgctctaag cccaaaagta ctatttttag atgagccgaa
     6301 ctctggtctt gatcctatga gcgcaagagc gcttgataag cttatatgca ccattagaga
     6361 tagtttaggg attactgtcg taatggttac tcacgatata gattctatat ttggcatttt
     6421 agatagattt cttataatag acaatcacaa aatcgcttat gagggcgatt taaaaggtgc
     6481 tttagaatac aaagaaaatc cacttaggga attatttact atgaggagtt taaatggaaa
     6541 ataaaaactc atattttata gccggactat ttttttgtat agttttggct atgcttacat
     6601 ttttcgtatt atatatgaat atcaaaggca atgaaggaga aactcgttac tattacatag
     6661 aaacaaaaga gcttccaaac ggtataaaaa atgactctca agtacgtttt ataggtgtgc
     6721 ctgccggtat cgtcaaagat atatatttca gcgatccaaa atcagccacc atagagataa
     6781 aaatgagtct caaaaaagat cttcctatca aacgagatag cgttgcagta gtagaagtcc
     6841 aaggaatcag cggtatagct tatataaata taagtaaagg tagcgatagc gcggaagtat
     6901 tttcgccaaa cgataaacct agtatcaaaa tgggacaagg cctactagcc aaaataggcg
     6961 atagcgccat aaatttagga agtcgtatag acgctagttt atcaaagatt gatcgtgcac
     7021 tttctgatga aaatttaaat aacttaagca actccatcgc ttctttaaac actattttat
     7081 caaacctagc aaaagtctct aatgagcaaa actcaaacaa tataaacaag cttttagaaa
     7141 actctgttgc tatctcaaat agagtatcgg ctattaaatt tgaagaatta aacaaaaatg
     7201 cagccgattt tttaaacata gctaaaaaaa gcgcaaagag ttttgaagat actcaaactc
     7261 tactaatgag caagttatca agcggtgaat acgattttaa gtctttttta actccgactc
     7321 tcagcgctac aaacgatact cttttgcagc tagactccct tattatggag cttaaaaaca
     7381 cgctttttag actagaagac aacccttatg aatttttctt taaagatact tcaggagata
     7441 agaaatgaaa tacgtttttg caatttttat atcgatttta ttgagcggct gtttagcgaa
     7501 acaaagccct caaacaacat attatgagtt aagcactcca aaaaaaagaa ctcaacaggt
     7561 gcgacagaag aagcgacgta tttattcacg tccaaaagat aaaatcctta agcccttatc
     7621 aaaccagaaa catcatttat aaagacggtc ttgagctgag ttacttacaa aatgttaaat
     7681 tcatagcata tccgagcgat atgatttaca aagcacttat tttgtattta gatcaaaatt
     7741 gccatattaa agagcgtagc gatgctcaag taagcttaga aatcactctt cttgatatcg
     7801 gtgttacgca aaacactgct tatatagaaa ttctagccaa actcacagat aaagataaaa
     7861 tcattttaaa caaaatccta agcgcaaaaa ctactacgac aagtagcgta gcagaagctt
     7921 taaacgcctc tttagagact gtttttgggg atttgcactc tattttaaat gaaatgctat
     7981 aagctagcag ccgtttctta cgatgaggct ctttggtaag cccatatgct ccattatact
     8041 tatctctttg cgcctcattt ctccatcgtc gttttcatga tcgaatccta gtatatgaag
     8101 tagtccgtga gtaaaaagta gtgctatttc atcatctgtg ctgtgaccta actcaagagc
     8161 cttgctagaa gctagatctg tatttataac tatagaacct atagggaaat gaggtacgta
     8221 agtaagcggg aagctaagaa catctgtagt tttgtccata cctcttttat ctctatttat
     8281 ctctctcatc tcttcattgc ttacaaatac aagctcgact tcggcttttg tgagcatatc
     8341 ggctatctta tctaaaacag aaggatagct atcattgcaa attatcattt tcgcctttca
     8401 aatttaaaat aataaataat cccaaaatct gtgttaaaaa aagcttaatt ttttatcttt
     8461 aatctgcaat ttttgaattt tagaaatcaa aatgagagat ttggaattta aattgaaata
     8521 tatgattatt aaattttaaa aatataaagt ta
//
LOCUS       DAPPKW010000078         8476 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.078, whole genome shotgun sequence.
ACCESSION   DAPPKW010000078 DAPPKW010000000
VERSION     DAPPKW010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8476)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8476)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8476
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.078"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..1273
                     /locus_tag="RPW04_001588"
     CDS             <1..1273
                     /locus_tag="RPW04_001588"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295674.1"
                     /translation="EFIIMVPHSVFLQNSSVKIEDEMPKNSDLKFDFSLKNITPLSLK
                     DGINEFGFSSDESLINEAISEINAGKSFIYDGYEISKFDNFDCSYLLSTGLKTAPKVF
                     VCDEKSLIALASFEKPVVSLKLNALFRTNHKDAPMYFDLRSAWDLNIYKICDILNKQG
                     INFLKVKSTKDDFKISVLDDSFLVLKNSKFLQQGDLDFIYSRTDKNLALFGLVLKEYD
                     LLNKSVCRIFLSKHSTDFIKVYKGEDEFNLLNLKAPESFDEIYAKIASFEGGERLLDN
                     YKASYSLPSGDINLANNFYSIFMIVDKILGFNGMIFDYARDFGGQKGVRIDYKMSSKD
                     EFDWVRLIRSAMSFKLAGAEPKNISFGCFESLALFLSDFGDIIKDEFECANMLLTGSL
                     FENKVIANLTLKYSNSNYKTCFSGYYPLEIT"
     gene            1260..3485
                     /gene="hypF"
                     /locus_tag="RPW04_001589"
     CDS             1260..3485
                     /gene="hypF"
                     /locus_tag="RPW04_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HDX6295675.1"
                     /translation="MKSLKIEIYGLVQGVGFRPFIYYLAKKFGIFGRVFNDSQGVKIQ
                     IYADDEACDKFCKAIFDELPPLARIDDFKVTGCSFKFDDFKIIESKQALKTAPILPDF
                     AICDECKREFYDKDDRRFHHPFINCTNCGPRFSIIKSLPYDRKNTTMSSFAMCDECKN
                     EYSNPYNRRYHAQPISCKTCGPKVSFKNLDGIVLANDEEAIRLCANELKSGKIIAIKG
                     IGGFHLVCDATNQKAISSLRERKNRPDKPFAIMCKDIQMASLVAYINEFEKDALTSNI
                     KPIILLKSKEILPANLALNLKKIGIFLPPTSLHLLLFEYIDFPIIATSANISGEPIII
                     DFESISKKLIKVCDGALDNDRDILNPSDDSIAFVYQSYLAWLRTSRGIKPKIIHSKFD
                     KKGCFLAIGSELKNQFAIYKDGLIFSSAYIGDLKNKATFDRFLMVLDMFVRTYEFKFE
                     FVIADKHPYFLHTKHFAKQGFTVHKVQHHYAHILCVMLENDITDSVLGFGFDGTGYGD
                     DSHIWGGEVFICDTKNYERVAKFDDFDLIGGDNAIKNIYYLTYSILCKYNIDAPKFYS
                     KFEQNQLLNLDKVMKSGINIIKTSSLGRIFDAFACLVLGINKVSYDAQAAMELESLYD
                     DTIDISYDFCINDGIISYKEPFLRALSDSPSVAATGFINGIANLILELAELYKKPVVL
                     GGGVFQNEALLKRVILNLNKNSIFFYLPKDEPVNDSSIAMGQIYFGLKFLGYNANNLK
                     T"
     gene            3499..3921
                     /gene="nikR"
                     /locus_tag="RPW04_001590"
     CDS             3499..3921
                     /gene="nikR"
                     /locus_tag="RPW04_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000380819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-responsive transcriptional regulator
                     NikR"
                     /protein_id="HDX6295676.1"
                     /translation="MEQEDKIIRFSVSLPEHLLDELDDMIKDRNYASRSEFTRDLIRE
                     KIVKYSWLNDNEDLVGVLTIIYDHHQGELMGRKMAIEHDSMVNIVCTNHIHMDHHNCL
                     ETMVLKGIARDIEEFSNNISGLRGVKFAKLVKAAVPKY"
     gene            3945..4733
                     /gene="hypB"
                     /locus_tag="RPW04_001591"
     CDS             3945..4733
                     /gene="hypB"
                     /locus_tag="RPW04_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HDX6295677.1"
                     /translation="MCKDCGCSMGNHAHSHEHTHNGLTHTHSHEHIGEHTHDHHAHPA
                     LNEKKTVEVIEKILKENDHEAEHNRSHLDEHGILCINLMSSPGAGKTTLLEATIKNGD
                     FKIGVVEGDLETNQDANRILKAGAKAHQITTGQTCHLDAFMVHEGLHHLPLSELDLVF
                     IENVGNLVCPASYDVGAHINAVLLSVPEGGDKVTKYPVMFRAADVLIITKTGLLEHFD
                     FDIGEVKKDARKLNPKVDIIEVDSRTGAGIEQWINYIKMKKEFR"
     gene            4733..5011
                     /locus_tag="RPW04_001592"
     CDS             4733..5011
                     /locus_tag="RPW04_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HDX6295678.1"
                     /translation="MCLSIPSKVVQIDENNFAIVETLGVRRGVSLDLISEPVNIGDYV
                     LIHVGFAMEKIDTKYALESLKIYEDIVRQMKDEEIDLYEGDMGLQSRA"
     gene            5011..6099
                     /gene="hypD"
                     /locus_tag="RPW04_001593"
     CDS             5011..6099
                     /gene="hypD"
                     /locus_tag="RPW04_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HDX6295679.1"
                     /translation="MDLINDFRDKDKILAISKLIQKQSKKPFNIMEICGGHTHSIMKF
                     AIPQLVGEHINFVHGPGCPVCVMPKSRIDEAIKLASMNGVIFCTLADMLRVPGSKSSL
                     LKLRGEGHDIRALYSPLDAIKIAQENTDKNVIFFAIGFETTTPMSAVLVEKAISLNLQ
                     NIFFHINHVTVPTPVRAIMSDENVKIDAFLGPSHVSVITGSAIYESLANEFKTPIAVS
                     GFEPLDIMDSILNLVKQQNAGTYEVYNQYARVVSKDGNLKAKELINRYFEPCDFEWRG
                     LGNINKSGMKLKDEFSNLDARVVFDCSVDSAGENRACICGEILRGRAKPYDCKVFGKV
                     CNPQNPIGSCMVSGEGACAAYYKYAKRA"
     gene            6101..7093
                     /gene="hypE"
                     /locus_tag="RPW04_001594"
     CDS             6101..7093
                     /gene="hypE"
                     /locus_tag="RPW04_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012001812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HDX6295680.1"
                     /translation="MDKIMLSHGGGGEEMNELINGLIFKIFNNDILKDSNDSAILNLN
                     NKVAFSTDSFVVTPIKFKGGDIGKIAVCGTVNDLAMVGASAKYLSCSLILEEGFGLDE
                     LKDILNSIKKTADEAGVSIVCGDTKVVPKGSCDKIFINTTGIGEIITDQIEVKNLEVC
                     AKILLSGDIGRHGAVILASREELALTSELESDCKVLKSVVLELLNSGIKPFCMRDATR
                     GGLSAVLNEWANFKNYEIKIYEEKIALSDEVVGICELLGFEAYELANEGTFVLAVDPK
                     DEQKALEVLRKYDKNANIIGEVVSDKRAGVLLENSYGGNRYLEPPKGELLPRIC"
     gene            7107..7448
                     /locus_tag="RPW04_001595"
     CDS             7107..7448
                     /locus_tag="RPW04_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HDX6295681.1"
                     /translation="MHELAIVQDLFKLCETNAMKNNAQKIMKVEIQVGRLSGVEPHYL
                     ESAFDAFKVNTICSSAKLIINTQDVVVRCLECGFESILLDNNFVCSKCGSNNLEVISG
                     EDMYLMRLEME"
     gene            complement(7454..>8476)
                     /locus_tag="RPW04_001596"
     CDS             complement(7454..>8476)
                     /locus_tag="RPW04_001596"
                     /inference="COORDINATES: protein motif:HMM:NF024509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA-like C-terminal domain-containing protein"
                     /protein_id="HDX6295682.1"
                     /translation="DLLIQTPDFSKFDVDFSSAKFDLPFLNLQNNPYDEDHFKILINK
                     NIDVISKSDHLKMSITDSDINLNLNNLKLLVDANSSKKEYEKNLNFAAKNSSIIIMDL
                     NRTLNFIKFSGNINNNELNFDGLFDNGEVKLNKQKNSVKIEGDGLDASFVNDFLGLDG
                     FKDGNFTVRLNGEGFTKFKSEIKVSNTYLSNYKFYQQFLSFLDSIPSLLIFKVPDFND
                     KGFTVNNGIMLVQRDDNLLTIKAIDLSGSSADITGNGTIDLKTKDINMTFQLKLLKDA
                     SSIISKIPVVSHIFLGKDKTISTVIKVRGTLDEPKFETQVVTDIIKTPYNIIKNTLEL
                     PFILFQ"
BASE COUNT         2896 a         1096 c         1674 g         2810 t
ORIGIN      
        1 tgagtttata attatggttc ctcactctgt atttttgcaa aatagttctg taaaaataga
       61 agatgaaatg cctaaaaata gtgatttaaa gtttgatttt tcattaaaaa atattactcc
      121 gcttagttta aaagacggta taaatgagtt tggttttagt agcgatgaga gtcttataaa
      181 tgaggctatc tctgagataa atgccggaaa aagcttcatt tatgatggat atgagatatc
      241 taaatttgat aattttgatt gtagctatct gctatctacc ggattaaaaa cagccccaaa
      301 agtttttgtt tgcgatgaaa aatctttgat agctttagcc agttttgaaa aaccagtcgt
      361 aagtttaaaa ttaaatgctc tttttagaac aaatcacaaa gatgcgccta tgtattttga
      421 tcttcgttcg gcgtgggatc tgaatattta taaaatttgc gatatcttaa acaagcaagg
      481 aattaacttt ttaaaagtaa aatctaccaa agacgatttt aaaatttcag tgcttgatga
      541 tagtttttta gtacttaaaa atagtaagtt tttgcaacaa ggcgaccttg attttatata
      601 ttcaagaacc gataaaaact tagctttatt tgggcttgtg ttaaaagagt atgatctttt
      661 aaataaaagt gtttgcagaa tatttttaag caaacatagt actgatttta tcaaggttta
      721 taaaggcgaa gatgagttta atcttttaaa tttaaaagct ccggaaagtt ttgatgaaat
      781 ttatgcgaaa attgcttcat ttgaaggcgg tgaaaggctt ttagataatt ataaagctag
      841 ttactcttta ccatcaggag atataaattt agctaataat ttttactcaa tttttatgat
      901 tgtagataaa attctgggtt ttaacggtat gattttcgac tacgctaggg attttggcgg
      961 tcaaaaggga gttaggattg attataaaat gtcaagcaaa gatgagtttg attgggtaag
     1021 acttataaga tctgctatga gttttaaatt agctggagct gagcctaaaa atatatcatt
     1081 tggttgcttt gaaagcttag cgcttttttt aagtgatttt ggagatatca taaaagatga
     1141 atttgagtgt gcaaatatgc tattaaccgg ctcacttttt gaaaataaag ttattgcaaa
     1201 tcttacgtta aaatactcaa actcaaacta taaaacttgt tttagcggat actatccact
     1261 tgaaatcact taaaattgaa atttatgggc tggttcaagg tgtaggattt cgcccgttta
     1321 tctactatct tgctaaaaaa tttggtattt ttggtagagt ttttaatgat tcccagggag
     1381 ttaagattca aatttatgca gatgatgagg cttgcgataa gttttgtaag gctatttttg
     1441 atgagcttcc tccactcgcg agaatcgatg attttaaagt aactgggtgc agttttaaat
     1501 ttgatgattt taagattata gagtctaaac aagccctaaa aacagctcct attttacctg
     1561 attttgctat atgcgatgag tgtaaacgcg aattttatga taaagatgat aggcgttttc
     1621 atcatccatt tattaattgt acgaattgcg gtcctagatt ttctatcata aaatctttac
     1681 catatgatcg taaaaatacg actatgagta gttttgcgat gtgtgatgag tgtaaaaacg
     1741 agtatagcaa tccgtataat cgtcgttatc atgctcagcc tatctcatgc aaaacttgtg
     1801 gtccaaaagt tagttttaag aatcttgatg gtatcgtttt agctaatgat gaagaagcga
     1861 taagactgtg cgcaaatgag ttaaaaagcg gtaagattat agctataaaa ggtatcggcg
     1921 gatttcattt ggtttgtgac gctacaaatc aaaaagctat aagtagtcta agagaacgta
     1981 aaaatcgccc tgataaacca tttgccatta tgtgtaaaga tatacaaatg gcttctttag
     2041 tggcgtatat aaatgagttt gaaaaagatg ctcttacctc aaatataaaa cctattattt
     2101 tacttaaaag taaagaaatt ttgcctgcaa atctagcttt gaatttaaaa aaaatcggca
     2161 tatttctacc tccgacatcg cttcacttgc tgctttttga atatattgat tttcctatta
     2221 tcgcaactag tgcaaatata agcggtgagc cgataataat tgattttgaa agtatttcca
     2281 aaaagcttat aaaagtttgc gatggcgcac ttgataatga tcgagacatt ctaaatccga
     2341 gcgatgatag tatagctttt gtatatcagt catatcttgc ttggttacgc acttcaagag
     2401 gtataaaacc aaagataata cactctaaat ttgataaaaa agggtgtttt ttggctatag
     2461 gaagtgagtt gaaaaatcaa tttgctattt ataaagacgg attgatattt agttctgctt
     2521 atataggcga tttaaaaaat aaagctactt ttgacagatt tttgatggtg cttgatatgt
     2581 ttgtgcgtac ttatgagttt aaatttgagt ttgtaatcgc agataaacat ccgtattttt
     2641 tacatactaa gcattttgcg aagcagggtt ttaccgtgca taaagtgcaa catcattacg
     2701 cccacattct ttgcgttatg ttagaaaacg atatcacgga cagcgttttg ggatttggtt
     2761 ttgatggtac gggttatggt gatgattctc atatttgggg cggcgaggtt tttatttgtg
     2821 atactaaaaa ctatgaaaga gtagctaaat ttgatgattt tgatcttata ggtggagata
     2881 atgctatcaa aaatatatac tatttaactt attctatttt gtgtaaatat aatatagatg
     2941 ctcctaaatt ttactccaaa tttgaacaaa atcagctttt aaatttagat aaagttatga
     3001 aaagtggtat aaatataatt aaaactagct ctcttggaag aatttttgat gcatttgcat
     3061 gtttagtttt aggtataaat aaggttagct atgatgcgca agcggctatg gagttagaaa
     3121 gtttatatga tgatactatt gatatttcat atgatttttg tataaatgat ggaattatca
     3181 gctataaaga gccattttta cgagctttaa gcgactctcc tagtgttgcg gcgactggat
     3241 ttataaacgg tatagctaat cttattttag aattagccga gctttataaa aagccagttg
     3301 tgcttggagg cggagttttt caaaatgaag ctctgctaaa acgcgtaatt ctaaatttaa
     3361 ataaaaatag tatatttttt tatctgccaa aagatgagcc tgttaatgat tctagtatag
     3421 ctatggggca gatttatttt ggtttaaaat ttttgggtta taatgcaaat aatttaaaaa
     3481 cataaaaaag ggtaaaagat ggaacaagaa gataaaataa ttaggtttag cgtgtctcta
     3541 cccgagcatc tgttagatga actagatgat atgatcaaag atcgcaacta tgctagtagg
     3601 agcgaattca caagagattt gatcagagag aaaatcgtta agtatagttg gcttaatgat
     3661 aatgaggatt tagtaggtgt tcttaccatc atttatgatc atcatcaagg agaacttatg
     3721 ggtagaaaaa tggctataga acatgattct atggtaaata tagtctgcac taatcatatc
     3781 catatggacc atcataactg ccttgaaact atggttttaa aaggtattgc tagagatatt
     3841 gaagagttta gtaataatat ctcaggacta agaggcgtaa aattcgcaaa acttgttaaa
     3901 gcagcggtac ctaaatatta ataaataaat ttaaaaggaa aaatatgtgt aaagattgcg
     3961 gttgtagtat gggaaaccat gctcattcac acgaacatac tcataatggt ctcactcata
     4021 ctcattcaca tgagcatata ggtgaacata ctcatgatca ccacgcccat ccagctttaa
     4081 atgagaaaaa aacagttgaa gttatagaaa aaattttaaa agaaaatgat cacgaagcag
     4141 agcataatag atctcacctt gatgaacatg gaatactttg tataaattta atgagtagtc
     4201 caggagcagg aaaaacaact cttctagagg caactataaa aaacggtgat tttaaaatcg
     4261 gtgttgttga gggtgatcta gaaactaatc aagacgccaa tagaatacta aaagctggag
     4321 caaaagctca tcagataaca accggtcaga cttgtcattt ggatgctttt atggttcatg
     4381 aaggtcttca tcatctacct ttaagcgagc ttgatcttgt atttatagaa aatgttggaa
     4441 atttagtttg tccagctagt tatgatgtcg gagctcatat aaatgcagtt ttattaagtg
     4501 ttcctgaagg cggcgataaa gtaacaaaat atccggtgat gtttagagcc gcagatgttc
     4561 ttataataac aaaaacaggg cttttagaac attttgactt tgatatcggt gaggtaaaaa
     4621 aagatgctag aaagctaaat ccaaaagttg atatcataga agtagatagc agaacaggcg
     4681 ctggaattga gcaatggata aattatatta agatgaaaaa ggaatttaga taatgtgtct
     4741 aagcatacct tcaaaagtag tgcaaatcga tgaaaataat tttgccatag tagagactct
     4801 tggagttagg cgcggtgtta gtttggatct tataagcgaa cctgtaaata taggggatta
     4861 tgttcttata catgtaggat ttgctatgga aaagatagat accaaatatg cgcttgagag
     4921 tttaaaaata tatgaagata tcgtgcgtca gatgaaagat gaagaaatag acctttatga
     4981 gggcgatatg ggattgcaaa gtagggctta atggatttaa taaacgattt tagagataaa
     5041 gataaaattt tagctattag caaacttata caaaaacaga gtaaaaaacc atttaatata
     5101 atggaaattt gcggtggtca tactcatagc ataatgaaat tcgcaattcc tcagttagta
     5161 ggagagcata taaattttgt tcatggtcca ggctgtcccg tgtgcgtaat gcctaaaagt
     5221 aggatagatg aagctataaa attagctagt atgaatggcg tgatattctg cactttagca
     5281 gatatgttaa gagttccggg aagtaaaagt tcgcttttaa aactaagagg tgaaggacac
     5341 gatataagag cgttgtattc tccgcttgat gctattaaaa tagctcagga aaatactgat
     5401 aaaaacgtta tattttttgc tatcggattt gaaacaacca ctcctatgag cgctgtttta
     5461 gtggaaaaag ctataagttt aaatttgcaa aatatatttt ttcatataaa tcacgtaact
     5521 gttcctactc cagtaagagc cataatgagc gatgaaaatg taaaaataga cgcattttta
     5581 ggaccaagcc atgtaagcgt tataacagga agcgctattt atgagagttt agctaatgag
     5641 tttaaaacgc ctatcgctgt tagcggattt gagccgcttg atattatgga tagtatatta
     5701 aatttggtaa aacaacaaaa tgcaggcacg tatgaagtat ataatcaata tgcaagagtt
     5761 gttagcaaag atggaaattt aaaagctaaa gagttgataa atagatattt tgagccatgt
     5821 gattttgagt ggagaggact cggtaatata aataaaagcg gaatgaaact taaagatgag
     5881 ttttcaaatt tagatgctag agttgttttt gattgcagtg ttgatagtgc gggtgaaaat
     5941 agagcctgta tatgcggcga gatacttaga gggcgagcta aaccttatga ttgcaaagtt
     6001 tttggtaaag tttgcaatcc tcaaaatcca ataggtagct gtatggttag tggcgaagga
     6061 gcatgcgcag catactataa atatgctaaa agggcttgat atggataaga taatgttaag
     6121 tcatggtggc ggcggagaag agatgaatga gcttataaac gggcttattt tcaaaatttt
     6181 taataatgat attttaaaag acagcaatga tagtgctatt ttaaatttaa ataataaagt
     6241 ggcttttagc acggatagtt ttgtggtaac tcctataaaa tttaaaggtg gagatatcgg
     6301 taaaatagca gtttgcggca cagtaaatga cttagctatg gtaggtgcta gcgcaaaata
     6361 cctaagctgt tctcttatac ttgaagaggg atttggcttg gatgagttaa aagatatctt
     6421 gaactctata aagaaaactg ccgatgaagc gggcgtgagc atagtgtgcg gcgatacaaa
     6481 agtagttcct aaagggagtt gtgataagat atttataaat acgacgggga tcggcgaaat
     6541 tataacagat caaatagaag taaaaaattt agaggtttgc gctaagatac ttttaagcgg
     6601 agacatagga agacatgggg cggttatact agctagcaga gaggagttag ctcttacaag
     6661 cgagttagaa agcgattgca aagtactaaa aagtgttgtt ttagagcttt taaactcagg
     6721 cataaaacct ttttgtatgc gcgacgcgac aagaggagga ttgtcggctg ttttaaacga
     6781 atgggctaat tttaaaaatt atgaaattaa aatttatgaa gaaaaaatag ctttaagcga
     6841 tgaagtcgtc ggtatttgtg agttactggg atttgaagcg tatgagctag caaatgaagg
     6901 aacattcgtt ttggcagtag atcctaaaga tgagcaaaaa gccttagagg tattaagaaa
     6961 atatgataaa aatgcaaaca tcataggtga agttgtaagt gataaaagag ctggagtttt
     7021 gctagaaaat agttatggcg gaaatagata tttagagccc ccaaaaggcg aattgttacc
     7081 tagaatttgt taaaaaggat aattttatgc atgagttagc tatagttcaa gatttattta
     7141 agctttgtga gacaaatgct atgaaaaaca atgcgcaaaa aatcatgaaa gtagagatcc
     7201 aagtaggcag gttaagcggt gtcgaacctc actatttaga gagtgcattt gacgctttta
     7261 aagttaatac tatttgcagc tcggcaaaac ttattataaa tacgcaagat gtggttgtaa
     7321 gatgtttgga gtgcggtttt gagagtattt tgctggataa taattttgta tgttcaaaat
     7381 gcggctcaaa caatcttgaa gttatatctg gagaagatat gtatcttatg cgtcttgaaa
     7441 tggagtaggg cgattattga aatagtataa aaggtagttc aagagtattt tttataatat
     7501 tatatggtgt ttttatgata tcagttacca cttgagtctc aaatttaggc tcgtcaagcg
     7561 ttcctcgtac ttttataacc gttgatatgg ttttgtcttt cccaagaaat atatgactga
     7621 cgaccggaat tttgcttatg atagagctag cgtcttttag tagttttaac tgaaaagtca
     7681 tattaatatc ttttgttttt agatctattg taccgtttcc ggttatatca gcactacttc
     7741 cgctaagatc gatagctttt atggtgagca aattatcatc tctttgaact aacataattc
     7801 cgttatttac agtaaatcct ttgtcgttga aatcaggaac tttaaatatc agtaatgaag
     7861 ggatagagtc aagaaagctc aaaaattgtt ggtagaactt ataattgctt aaataagtat
     7921 tacttacttt tatttcgctt ttaaatttag taaagccttc tccgtttaat ctaacagtga
     7981 aatttccgtc tttaaatccg tctaatccta aaaaatcatt gacaaaagaa gcgtctaagc
     8041 catcgccttc tatttttaca ctattttttt gcttgtttag ttttacttct ccgttatcga
     8101 ataatccgtc gaaatttagt tcgttattgt ttatatttcc gctaaattta ataaaattta
     8161 gagttctatt taaatccatt attataattg aagagttttt tgcggcgaaa ttcagatttt
     8221 tttcatactc ttttttggat gaatttgcat caactaataa ttttagatta tttaaattta
     8281 aatttatatc cgagtctgtt atactcattt tcaaatgatc acttttgctt attacatcta
     8341 tatttttatt tattaaaatt ttaaaatgat cttcgtcgta tgggttgttt tgtaaattta
     8401 aaaacggtaa atcaaacttt gcactactaa aatcaacatc aaatttagaa aaatcaggag
     8461 tttgtataag cagatc
//
LOCUS       DAPPKW010000079         8229 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.079, whole genome shotgun sequence.
ACCESSION   DAPPKW010000079 DAPPKW010000000
VERSION     DAPPKW010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8229)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8229)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8229
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.079"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            15..1049
                     /locus_tag="RPW04_001597"
     CDS             15..1049
                     /locus_tag="RPW04_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HDX6295683.1"
                     /translation="MKGSFLVLSSLLVASSMFAISDADLLKEAKNAGLVALPSDQKQV
                     DAMLKEIGVEPNKYTDAKAELGKKLYLEPRLSKSGIISCNTCHNLGLGGTDGIAAAVG
                     HKWTSNPHHLNSPTVYNSVLNTTQFWDGRAMTLVDQAKGPIEAEPEMATPAALAVERI
                     ASLPEYVAEFKKIYGDSGVTFDNIADSIASFERTLLTPSRFDKFIKGDTKALTKAEKA
                     GLKLFLDKGCSACHTGVNLGGSMQAFEVAGKYQFANIGDFKGDANGMVKTPTLRNVAE
                     TAPYFHNGAIWKLEDAVKTMGSVQLGIEITDAEATSIVTFLNALTGDKPKVVYPMFPK
                     STEKTPKPEL"
     gene            1258..1566
                     /gene="rplU"
                     /locus_tag="RPW04_001598"
     CDS             1258..1566
                     /gene="rplU"
                     /locus_tag="RPW04_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDX6295684.1"
                     /translation="MYAIIKHGGKQYKVSEGDFLNLDHFEAEAKSNVEIDEVLAVNDG
                     SLKVGAPFIKGAKVVLEVVGEGKDKKVVIYKKRRRKDSKLKRGFRRQYTRVKVTSIKA
                     "
     gene            1577..1834
                     /gene="rpmA"
                     /locus_tag="RPW04_001599"
     CDS             1577..1834
                     /gene="rpmA"
                     /locus_tag="RPW04_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDX6295685.1"
                     /translation="MAHKKGQGSTQNNRDSIGRRLGVKKFGGEFVRAGNIIIRQRGTA
                     THPGNNVGIGRDHTIFALVDGFVKFERKDKDRKKVSVYPAA"
     gene            1920..2954
                     /gene="obgE"
                     /locus_tag="RPW04_001600"
     CDS             1920..2954
                     /gene="obgE"
                     /locus_tag="RPW04_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HDX6295686.1"
                     /translation="MFVDSASFSVSSGKGGPGCASFRREKHVPLGGPDGGDGGNGGDV
                     YFIVDNNTHTLANYKGKRAMKAANGVPGLPRNMTGKKGDNLELIVPPGTAVYDADSNE
                     LLLDLISEGQKELFLSGGKGGLGNVHFKTSVNQAPTKAQPGLPGETRNIRLELKLIAD
                     VGLVGFPNVGKSTLISSISNAKPQIANYEFTTLTPKLGLVEVDEFSGFIMADIPGIIE
                     GASDGKGLGIQFLKHIERTKVLLYMIDLANYRSLKEQFETLKSEVLKFSPNLAKRDFA
                     IALTRLDAAVDADEKIEEFLNEFKFDKKQDIYEYDRQKPFFVLPISSVAGDGLKELKF
                     GLLEILKGEN"
     gene            3120..3884
                     /gene="proB"
                     /locus_tag="RPW04_001601"
     CDS             3120..3884
                     /gene="proB"
                     /locus_tag="RPW04_001601"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDX6295687.1"
                     /translation="MKRVVIKVGSHVISDEHSISEKRVASLCEFLYDLSLKYEVILVS
                     SGAISTGQTKLDIPRTTVVNKQILSAIGQPYLMEIYSRALAKFGKQAAQLLLSAGDFD
                     SRKKTNHALNVINGLLKNGIIPIVNENDAIAISEIVYGDNDRLSSAVSFYFNADLLVI
                     LSDIDGYYDSDPRENKNAKIRHLVTNLSDEELNRTSDTGSKHGTGGITTKLLAAKFLM
                     DNKKDMFLASGFDLSDARAFLLDNNQIGGTIFKGEQ"
     gene            3881..4795
                     /locus_tag="RPW04_001602"
     CDS             3881..4795
                     /locus_tag="RPW04_001602"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDX6295688.1"
                     /translation="MKNIVFMGTPDYASVILEAILKNGGYNVVAVFTQPDRPVGRKAI
                     LTPPEVKKTVLQSGLDIPIFQPLNLKDSSTVNDIKALKPNFIVVAAYGQILPKDILDI
                     APCINLHASLLPKFRGASPIQEAILRGELLSGVTAMRMGVGLDDGDILGFSVIEIPNL
                     KSSQLFCELAKMAAKLTIKILNEFESISPIAQFHALSSKCGKVHKEDGLIDIKLQTPK
                     IIESKFRAYYPWPGLYLENGVKIWDMEISNLKGENGYVLSIDYDGFTIGVNGGSIKIK
                     SLQESGKKMVNAKDYINGKRLGVGSKFC"
     gene            4776..5411
                     /locus_tag="RPW04_001603"
     CDS             4776..5411
                     /locus_tag="RPW04_001603"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HDX6295689.1"
                     /translation="MVVSFVDECSSTQEDLIASLRLGVITPPYTLVASRQTKGVGSRG
                     NRWESMDGNLYFSFCIDSSSLTSDLPSSSASIYFAFLMNEYLKSCGSKIWLKWPNDFY
                     LDDKKIGGVITTKIKSVYICGMGINLKTSPRYSNVLDIDHGATQIVDGFLKSLELNPS
                     WKQIFSKYLLEFEKSKIFSAHVDGELMSLENSVLLDDGSIIINNKKVYSLR"
     gene            5408..6190
                     /locus_tag="RPW04_001604"
     CDS             5408..6190
                     /locus_tag="RPW04_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDX6295690.1"
                     /translation="MSEVITIANQKGGVGKTTTAVNLAASLAVAEKKVLLVDIDPQAN
                     ATTGLGFSRSDYEFNIYHVLTGRKKLSEIILKTEINTLHLAPSNIGLVGIEQEFNEQN
                     RDYKAILRNKISELRDDYDFLIIDSPPALGSLTINALSASDSVIIPIQCEFYAMEGLA
                     QILNTVKVIKKSINPKLTIKGFLPTMYSAQNNLSKETVADLKKHFENKLFKVADSEEG
                     FVIIPRNVKLAESPSFGKPVILYDIKSSGSIAYQNLAYSIMG"
     gene            6193..7038
                     /locus_tag="RPW04_001605"
     CDS             6193..7038
                     /locus_tag="RPW04_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HDX6295691.1"
                     /translation="MALGRGLSAILEDVENAYDKELNRDLISDIDIDKIIPNPFQPRK
                     HFDQESLSELSASIEKHGLIQPIIVIKKGNGYTLIAGERRLRATKLLGKDSIKAIVAN
                     LEDQNLRELALIENIQRENLSPIELANSYKELIEEYKITQEALSNIIKKSRTVITNTL
                     RLLSLDESTKRLIEDGKLTQGHAKVIVGLDKDDEKMVVDTIVGQRLNVRDTENLIKRI
                     KNKADKSSNLVSMQQNYNENLNILKDAFLNLGYECKINGKKMILNFADVEKIQNLIQV
                     IQKIQ"
     gene            7108..7533
                     /locus_tag="RPW04_001606"
     CDS             7108..7533
                     /locus_tag="RPW04_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B'"
                     /protein_id="HDX6295692.1"
                     /translation="MNAQIDLPLLLITVVIFLGLIFVLNSILYKPLLKFIDDRNRSIK
                     QDEDSVSKNANDASAYKAEIERIILDARAEANAKKQAALARAKEEAAKKIEAKKATIE
                     SEYEIFAAGLAAKKSELRNMLLEKLPEFKNSLAGSLSKI"
     gene            7543..8061
                     /locus_tag="RPW04_001607"
     CDS             7543..8061
                     /locus_tag="RPW04_001607"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDX6295693.1"
                     /translation="MNIKILLLLLAPIFVFGATASGAERDYDIVARTINFVIFAGILY
                     YLIAEPVKKAYKGRINSIAARLDAIQDKLRASKAQKDEVLKKVEDAKNSASGLLESTD
                     KEIEILISKIEKDTQNELLLLQKSYEEQKDFEERKIVRSVVGEILDEVFAEDTLKIDQ
                     SEFVNLVLKKVS"
     gene            8061..>8229
                     /locus_tag="RPW04_001608"
     CDS             8061..>8229
                     /locus_tag="RPW04_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDX6295694.1"
                     /translation="MKEVVAKKYVKALILSLSSDEFDKLGNELKDISNAFLLPKLKVI
                     IDSPDISSKQKA"
BASE COUNT         2969 a         1208 c         1609 g         2443 t
ORIGIN      
        1 aaggagacga acatatgaaa ggttcatttt tagttttaag ttctttattg gttgcaagct
       61 caatgtttgc tattagtgat gctgatttat taaaagaagc aaaaaatgca ggattggtag
      121 ctttgccatc tgatcaaaaa caagttgatg ctatgcttaa agagataggc gttgaaccaa
      181 ataaatatac agacgctaaa gcagaattag gtaaaaagtt atatcttgag ccgcgtttgt
      241 caaaaagcgg tatcattagc tgtaatacat gccataacct agggcttggc ggtactgatg
      301 gcatagctgc tgcggttggt cataaatgga cttcaaaccc acatcattta aactctccaa
      361 ctgtttataa ctcagtatta aacacaactc aattttggga tggtcgtgct atgactttag
      421 ttgatcaagc aaaaggacca atcgaagctg agccagagat ggctactcca gcggcacttg
      481 cagttgaaag aattgcatct ttacctgagt atgtagctga gtttaaaaaa atatatggtg
      541 atagcggcgt aacttttgat aatatagctg attctatagc tagttttgaa agaactcttc
      601 ttactccatc aagattcgac aaatttataa aaggcgatac aaaagcttta acaaaagctg
      661 aaaaagctgg tcttaaatta ttcttagata aaggctgttc tgcttgccat acaggagtaa
      721 atcttggtgg ttctatgcaa gcatttgaag tagctggaaa atatcaattc gcaaatatag
      781 gcgacttcaa aggtgatgca aacggtatgg ttaaaactcc tactttaaga aatgtagcag
      841 aaactgctcc atattttcac aatggtgcta tatggaaact tgaggacgct gttaaaacta
      901 tgggtagcgt tcaacttggt atagagataa ctgatgcaga agcaactagt atagttacat
      961 tcttaaacgc tttaactggt gacaaaccaa aagttgttta tccaatgttc ccaaaaagca
     1021 cagaaaaaac tccaaaacct gagctataat ttttaagtcc cattttaaat gggacttctt
     1081 acactttatc acaacatatt ttatatttac aatccatatc ttgcataaat tcaactaaat
     1141 tttatataaa tttgagtata atccacattc catagccaaa tcagctccca aaattttcta
     1201 tattttttta atcttagaaa tgctttttgg tctaccaaat ttataaagga tagtttgatg
     1261 tacgctatta tcaaacacgg cggaaaacag tataaagtta gcgaaggcga cttcctaaat
     1321 ttagatcatt ttgaagccga agcaaagtca aatgtcgaaa ttgacgaagt tttagcagtc
     1381 aatgacggta gtttaaaggt aggtgcgcca tttataaagg gtgcaaaagt tgtcttagaa
     1441 gtagtcggcg aaggcaaaga taaaaaagtt gttatctata aaaaacgcag acgtaaagac
     1501 tcaaaattaa aacgcggttt tagaagacaa tatactcgcg ttaaagttac aagtataaaa
     1561 gcctaaggag taaagtatgg cacataaaaa aggtcaaggt tcaacccaaa ataaccgtga
     1621 tagtataggt cgtcgcttag gtgttaaaaa attcggtggt gagtttgtaa gagctggaaa
     1681 tattattatt cgtcaaagag ggactgcaac tcatccggga aataacgtag gtatcggaag
     1741 agatcatact atatttgccc ttgttgacgg ttttgttaaa tttgaaagaa aagacaaaga
     1801 tagaaaaaaa gtttctgtct atccagcggc ttaattcata gccctttttt gggctatttc
     1861 tcctatttta atttcagcaa ttttttatta taatttctcc taaatataag gataatcata
     1921 tgtttgtaga tagtgcaagt tttagtgtaa gtagcggtaa aggcggtccg ggatgtgcta
     1981 gttttcgccg tgaaaaacat gttccgctag gcggacctga tggcggagat ggcggaaacg
     2041 gcggagatgt ttattttata gtagataaca atactcacac tctagccaac tacaaaggca
     2101 aaagagctat gaaagctgca aacggcgtac ccgggcttcc tagaaatatg acaggaaaaa
     2161 aaggagataa tctcgagctt atagttcctc caggaactgc agtttatgac gccgatagta
     2221 atgagctttt gcttgatttg attagcgaag gacaaaaaga gttatttctg agcggcggaa
     2281 aaggtggact tggaaacgtt cattttaaaa caagcgtaaa tcaagctccg actaaagctc
     2341 aaccaggact tccaggcgag acaagaaaca tacgtttaga gctaaaactc atagcagacg
     2401 tagggcttgt aggatttcca aatgttggca aatcaactct catctcaagt atatcaaacg
     2461 caaaaccaca gatcgcaaat tatgaattta caactctcac gccaaaacta ggacttgtag
     2521 aagttgatga gttcagtgga tttatcatgg cagatattcc gggcatcata gaaggcgcaa
     2581 gcgacggaaa aggacttgga atacagtttt taaaacatat agaaagaaca aaagtcttgc
     2641 tttatatgat agatttggca aattatcgtt cgcttaaaga gcagtttgaa accctaaaaa
     2701 gtgaagtttt gaagttttcg ccgaatttgg caaaaagaga ttttgctata gctttaacaa
     2761 ggcttgatgc tgcagtagac gctgatgaaa agatagaaga gtttttaaat gaatttaaat
     2821 ttgataaaaa acaagatatt tatgaatacg accgccaaaa gccgtttttc gtacttccta
     2881 tatcaagcgt cgccggagat ggcttaaaag agcttaaatt cggacttttg gaaattttaa
     2941 aaggcgaaaa ttaatttcag tcgttagata tctcaaaaat cattaaagtg tcttgtcaaa
     3001 agtgcgacaa agacacttct tcaaatacct taatcttatc tatctacgtc aatatctgag
     3061 tttaagtagc aaaatagtat aatcatcaaa tttattttaa atttaaaggc gatttcttta
     3121 tgaaaagagt ggttataaaa gtaggctctc acgtgatcag cgacgagcat agtataagcg
     3181 aaaaaagagt agctagttta tgcgaatttt tatatgattt aagcttaaaa tatgaagtga
     3241 ttttggtaag ttctggtgct ataagtacgg gtcaaacaaa gcttgatatc ccaagaacta
     3301 ctgttgttaa taagcaaatt ctctctgcta taggacaacc gtatttaatg gaaatttata
     3361 gtagggcttt ggctaaattt ggtaaacaag ctgctcagct tttacttagt gctggcgact
     3421 ttgactcgag aaaaaagaca aatcacgcac taaatgttat aaatggtctt ttgaaaaacg
     3481 gtatcatacc tatcgtaaat gaaaatgatg ctatcgctat cagcgagata gtttatggtg
     3541 ataacgatag actttcaagt gccgtttcgt tttattttaa cgccgatttg ctagttatat
     3601 taagcgatat cgatggttat tacgatagcg atccaagaga aaataaaaac gcaaaaatcc
     3661 gtcatctagt cactaattta agcgatgaag agctaaatag aactagcgat actggaagca
     3721 agcatggtac aggcggcatt acaacaaagc ttttggccgc taagtttttg atggacaata
     3781 aaaaagatat gtttttagct agcggatttg atcttagtga tgcaagagca tttttactag
     3841 acaataatca aataggcggt acgatattca aaggcgaaca atgaaaaata tagtttttat
     3901 ggggactcct gattatgcta gcgtcatttt agaagctatc ttaaaaaatg gcggttataa
     3961 cgtagttgca gtatttacgc agcctgatcg cccagtagga agaaaggcaa tcttaactcc
     4021 tccagaggta aaaaaaacag ttttgcaaag tgggcttgat attcctattt ttcaaccttt
     4081 aaatttaaaa gatagtagca cggtaaatga tattaaggct ttaaaaccta attttatcgt
     4141 agttgcggct tacgggcaaa ttttaccaaa agatatttta gatattgcgc cttgtataaa
     4201 cttgcacgct tcattactcc ccaaatttag aggtgcaagt cctatccaag aagcgatttt
     4261 acgtggtgaa ttgcttagtg gtgtaactgc tatgagaatg ggagtggggc ttgatgatgg
     4321 agatatactc ggctttagcg tgatcgaaat acccaattta aaatcaagcc aacttttttg
     4381 tgagttagca aaaatggctg caaaacttac tataaaaatt ttaaatgaat ttgaaagtat
     4441 atctcctata gctcaatttc atgctttaag ttctaagtgc ggcaaagtcc ataaagaaga
     4501 tggtctaata gatattaagc ttcaaactcc aaaaatcata gaatctaaat ttagagcata
     4561 ctatccatgg ccgggattat atcttgaaaa cggagttaaa atttgggata tggagatttc
     4621 aaatttaaaa ggcgaaaatg gatatgtgtt aagtatagat tacgacggtt ttacgatcgg
     4681 agtaaatggc ggtagtataa agataaaatc ccttcaagaa tccggaaaaa aaatggtaaa
     4741 tgcaaaagac tatataaatg gtaaaaggtt aggtgttggt agtaagtttt gttgatgagt
     4801 gtagttctac tcaagaagat cttatagcgt cattaagact cggtgttata actcctcctt
     4861 atactttagt cgcttctagg cagactaaag gagttggaag taggggaaat agatgggaaa
     4921 gtatggacgg aaatttatat tttagtttct gcatagatag ttctagtttg acttctgatc
     4981 tgccttcaag ctctgctagt atatattttg cttttttaat gaatgagtat ttaaagagtt
     5041 gtggatcgaa aatatggctt aaatggccaa acgattttta tctcgatgat aaaaagatag
     5101 gaggagttat aacaactaag ataaaaagcg tttatatatg cggaatgggt ataaatttaa
     5161 aaacatctcc acggtattca aacgtacttg atatagacca tggagctact cagatagtag
     5221 atggattttt aaaatcttta gaacttaatc cttcatggaa gcaaattttt agcaaatatt
     5281 tgttagaatt cgaaaaatca aaaatattta gtgctcacgt cgacggtgag cttatgagcc
     5341 ttgagaattc tgttttgttg gacgatggct cgataataat aaataacaaa aaggtatatt
     5401 ctttaagatg agtgaagtta taaccattgc caaccaaaaa ggtggcgtag gaaagacgac
     5461 aactgctgta aatttggctg catctttggc tgtagctgag aaaaaggtac ttcttgtaga
     5521 tatcgaccct caagctaatg ctacaaccgg tcttggtttt agcagaagcg attatgagtt
     5581 taatatatat catgtattaa caggtagaaa aaaattaagc gaaattattc ttaaaacaga
     5641 gattaacacc ttgcatcttg cgccatcaaa tataggatta gtaggtatcg aacaagaatt
     5701 caatgagcaa aacagagact acaaagctat tttaagaaat aaaatttccg aacttagaga
     5761 cgactacgat tttttaatca tagatagccc gccagctctc ggaagtctta caataaatgc
     5821 tcttagcgcg agtgatagcg ttatcatacc tatacagtgc gagttttatg ctatggaagg
     5881 gttagctcag atattaaata cggtaaaagt tattaaaaag tctataaatc ctaaattaac
     5941 tataaaaggt tttttgccca ctatgtatag tgcacaaaat aatctatcta aagagacagt
     6001 tgctgattta aagaagcatt ttgaaaataa attatttaaa gttgcagact ccgaagaggg
     6061 atttgttatc atcccaagaa atgtaaagct tgccgaaagt cctagtttcg gcaaaccggt
     6121 aattctttat gatatcaaat caagcggaag tatagcttat cagaatttag cttattcgat
     6181 aatggggtaa aaatggcttt aggaagagga cttagtgcga tacttgaaga tgtagaaaat
     6241 gcgtatgaca aagagttaaa tagggatctt atatcagata ttgatataga taaaataatt
     6301 ccaaatccat tccagccaag aaagcatttc gatcaagaat ctcttagcga acttagtgca
     6361 agcatagaaa aacatggctt aatccagcct attatagtta taaaaaaagg aaacggatat
     6421 actcttatag ccggcgagag aaggcttaga gctacaaaac ttttaggcaa agatagtata
     6481 aaagctatag tagcaaattt agaagatcaa aatctaagag agttagcttt aatagaaaat
     6541 attcaaagag aaaatttaag tcctattgag ttggcaaatt catataaaga gcttatagaa
     6601 gagtataaaa ttactcaaga agcactatct aatattataa aaaaaagtcg tacagttatc
     6661 acaaatactc ttcgtttgct tagcttagat gaatccacaa aacgtcttat agaagacggt
     6721 aaattgactc agggccatgc gaaagttata gtaggacttg ataaagatga tgaaaaaatg
     6781 gttgttgata ctatagtcgg tcaaagatta aatgtaagag atactgaaaa tttgataaaa
     6841 agaataaaaa acaaagcaga caaatcctca aatttagtat ctatgcaaca aaattataat
     6901 gagaatttaa atattttaaa agatgcgttt ttaaatttgg gatatgaatg taaaattaat
     6961 ggcaaaaaaa tgatattaaa tttcgctgac gtggaaaaaa ttcaaaattt aattcaagta
     7021 attcaaaaaa ttcagtaaaa tttagccttt attgttgtaa aatattcaac tattatttat
     7081 gtttgtgaat gaaatttact aaggagaatt aatgcacaaa ttgacctgcc gcttttgctt
     7141 attacggttg tgatctttct agggctgatt tttgttttaa actctatatt atataaacct
     7201 cttcttaaat ttattgatga tagaaataga tcaataaaac aagatgaaga tagtgttagc
     7261 aaaaatgcaa atgatgctag cgcgtataaa gccgagattg agagaatcat tcttgatgct
     7321 agagctgaag caaatgcaaa aaaacaagct gctttagcta gagcaaaaga ggaagccgca
     7381 aaaaaaatag aagctaaaaa agcgactata gagtctgaat atgagatttt tgcagctgga
     7441 ttggctgcta aaaaaagcga actaagaaat atgcttttag aaaaactccc tgaatttaaa
     7501 aatagcctgg ccggctcatt gtcaaagata taggagattg ttatgaatat taaaatttta
     7561 ttgctgttat tagctccgat ctttgttttt ggtgcgactg ctagtggtgc agagcgtgac
     7621 tatgatatag ttgctagaac tataaacttt gttatatttg ccggtatttt atactatttg
     7681 atagccgagc cggttaaaaa agcttataaa ggtagaataa attcgatagc tgctagactt
     7741 gatgctatac aagataaact aagagcttca aaagcgcaaa aagatgaagt tttaaaaaaa
     7801 gttgaagatg caaaaaacag tgcgagcggt ctattagagt ctacggacaa agagatagaa
     7861 attctaatat caaaaataga aaaagatact caaaatgaac ttttgttact tcaaaaaagc
     7921 tatgaagaac aaaaagattt tgaagaaaga aagattgtta gatccgtagt cggtgaaatt
     7981 ctagatgaag tttttgccga agatacccta aaaatcgatc aaagcgaatt tgtaaattta
     8041 gtacttaaaa aggtaagctg atgaaagaag tagtggctaa aaagtatgta aaagcgctta
     8101 ttttaagttt aagctcagat gaatttgata aattgggcaa tgaacttaaa gatatatcaa
     8161 atgctttttt actcccaaaa cttaaagtaa taattgattc tccagatatc agttctaaac
     8221 aaaaagctg
//
LOCUS       DAPPKW010000080         8121 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.080, whole genome shotgun sequence.
ACCESSION   DAPPKW010000080 DAPPKW010000000
VERSION     DAPPKW010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8121)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8121)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8121
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.080"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(183..1076)
                     /locus_tag="RPW04_001609"
     CDS             complement(183..1076)
                     /locus_tag="RPW04_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HDX6295695.1"
                     /translation="MLKKKIKDNTPGILLYGLTPPKLNLTHEEAIIVAKKQLERLENR
                     GIDGLVIYDLQDESNRNKSERTFEFCGTIKPEIYHKEFLKLAYPAVIYKAVGNYTQDE
                     FCRFLNDSGENLSVFVGASSKKDSPKLSLDMAYKLKKEQGRDITLGGICIPERHEKKG
                     DEDLRVAGKTIKGCEFFITQAVYNLENAKRFLDDYSNLNIKKVPIIFTFTPCGSLKTL
                     EFMRWLGISVPKQFENRLFKSDDPLKASISLSLDMFEFLFKYGKAKGISIGANVESIS
                     TRKVEIEASVELVNGIKSIIS"
     gene            complement(1135..3390)
                     /gene="metE"
                     /locus_tag="RPW04_001610"
     CDS             complement(1135..3390)
                     /gene="metE"
                     /locus_tag="RPW04_001610"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HDX6295696.1"
                     /translation="MSKSFITGFPRIGEQRELKFALESFWAGKSDFSEVERIAKELKV
                     RHWKYQKDAHIDFISANDFSYYDLMLDNIVAFGAIPPRFDGLSGTDLYFSMARGNKTS
                     VAMEMTKWFNTNYHYIVPELSKETKFSLNPTKILNEYKEAKAQGITPKINLIGPITFL
                     ALSKTTDGSCALCHLDALVEQYAKLLVEISKLDNEVVVQIDEPIFVTDKAEKLKDKIV
                     LVYEKLCTNDNVKIIFMTYFEHANEAVKEIVKTKVWGVGLDFVHASCQKDSLEILKNS
                     DKVLFAGLIDGRNVWVSDLDAKLELINKIKEYISSERLNIGTSCSLLHVPYTLKYEEK
                     LSIKEWLSFAVEKLTEVKLLKKLANNEHFCESGEGLLAKNRAAIASRKTSELVNDKTV
                     QERVKNLSKFERDTPYEERIKTQKAKFNLPELPTTTIGSFPQTPELRQVRNAYKKSLI
                     SQEAYEKDIKKYIDECIAFQEECGLDVLVHGEPERNDMVEYFGEQLKGYAFSTNGWVQ
                     SYGSRCVKPPLLFGDVSRPKAMTVDWISYAQSKTNKIMKGMLTGPVTILNWSFVRDDK
                     PRSEIAKELALCIYDEISDLQNAGIKIIQVDEAAFKEGYPLRHENVSAYEKFAVDCFK
                     LSVCSAKAETQIHTHMCYSEFNDIIKTIEAMDADVISIETARSGNELLKIFKSVGYKQ
                     EVGPGVYDIHSPRVPSVEEIATQIHALLEVLPKSQLWINPDCGLKTRKWEEVKPSLTN
                     MTAAVKIVRLS"
     gene            complement(4438..6528)
                     /locus_tag="RPW04_001611"
     CDS             complement(4438..6528)
                     /locus_tag="RPW04_001611"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HDX6295697.1"
                     /translation="MENKDIFINRELSWLRFNSRVLSQCEKDLPLLEKLKFIAIYSTN
                     LDEFYMIRIAGLKQLFAAGVVVSGSDEMTPLDQLREIRKYLKDEQQILEDYYKETVTK
                     LSLSGLHIKKYEDLEDDIKARADDYFFSNILPVIVPIAVDATHPFPHLNNLSFGLAVK
                     LCDEAHPEIVKFGMIRISRVLPRFYNAGDGIYVPIESIVHRHAEEIFPGYKLLASCAF
                     RVTRNADMVIEEEEADDFMLILEQGLKLRRKGAFVRLQIEKDPDPEILEFLNLHMKIF
                     YKDIYEYSIPLTLGALWQIIGDKEFSHLLLPPYTPKTLPPFGQNVSMFEAIDKEDVLL
                     FHPYESFEPVTQFIKEAAKDPKVISIRMTLYRVEKNSSIIQSLIDAASDGKQVTVMVE
                     LKARFDEENNLHWAKALENAGAHVIYGITGFKVHAKVSQVIRQIGDKLKFYMHLGTGN
                     YNGSSAKIYTDVSYFTSREEFAKDTTTFFHILSGFSKNRRLNALSMSPMQIKERVIEM
                     IKNEAKMGKDGKIIAKMNALVDSDVIKELYNASRAGVQIDLIIRGICCLRPAVEGMSE
                     NIRVRSIIGKYLEHARIFYFKHANPKFYISSADWMPRNLERRLELMTPIYESVLQGKL
                     SEILRVQLIDNDLSYDLGNDGEYTSVIRADNEKSLNNHEFFENYLNKVFKTLKKGSDQ
                     DKVQILASKLFKES"
     gene            complement(6641..7960)
                     /locus_tag="RPW04_001612"
     CDS             complement(6641..7960)
                     /locus_tag="RPW04_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295698.1"
                     /translation="MSFKPTKLFIKYAFPNMISTAFISFYFIIDTIFVGQMIGTKALG
                     AMGLTMPFIMISFALIDMIAVGSSVQIALRLGSGRFKQACGIFSFSLITVFIFACFVF
                     LFGFFFIEPISNYLIDDKELAVLAAQYAKVFALFCPVIMLCFMLDNYLRICKKPIYSM
                     CVNIFVAFINIVLDYIFIVILEWGLFSAALATCIGLSLGTLLGFTPFVFGNLELKLSK
                     AFINLKIIKNIIYNGSSEFLTNISTSLFVIAANALLLDIAGVRGVAILEVIFAIDSFM
                     ASLIFSMCDGMQPLLSYYYGAKNIKFIMALFWRTFFGAIALGVMIVVAISFGSDFIVS
                     FFSRDIEFIAASKEALLVFSPVYLCSWFIIFANSFFTALNRPAYSLSISLSANLLIPL
                     PFLYILTNFLEVNGVWLTPFAAKFCVVWLALYFLRETIKKLNLNFLS"
BASE COUNT         2635 a         1521 c         1209 g         2756 t
ORIGIN      
        1 tgttttgata tagattatta tatgtataaa ctatcagttt attatgaaga attgaatgct
       61 tttttgaatt aatttttatg gataatgatg cagatacaag cagatttagt aacaaaaagc
      121 gctttttgca ttatttgcgc gctcccctat tttgcaatta tatttgtaaa tacactaaaa
      181 aattaagaaa taatgctttt tatcccgttt acaagctcaa ccgaagcctc gatttcaact
      241 tttctagtag atatactttc tacatttgca cctatgctaa taccctttgc tttaccgtat
      301 ttaaataaaa attcaaacat atcaaggctt aaacttatag aagctttaag tggatcatcg
      361 cttttaaaca gtctattttc aaactgttta ggtactgaaa ttccaagcca acgcataaac
      421 tcaagcgttt tcaaactccc gcaaggcgta aatgtaaata taataggtac ttttttgata
      481 tttaaatttg aataatcgtc taaaaatcgt ttggcgtttt ctagattata tacggcttgc
      541 gtgataaaaa actcgcagcc ttttatggtt tttccggcaa cacgcagatc ttcatcgcct
      601 tttttctcat gtctttccgg tatgcagatg ccgcccaaag ttatatctcg accttgttct
      661 tttttgagtt tgtatgccat atcaagactt agtttcggac tgtctttttt ggaactagcg
      721 cctacaaata cacttaaatt ttcaccagaa tcatttaaaa atctgcaaaa ttcgtcttgc
      781 gtataatttc caacagcttt gtaaataacg gctggataag ctagttttaa aaactcttta
      841 tgataaattt cgggttttat agttccacaa aactcaaagg tacgctcact tttatttcta
      901 ttgctttcat cttgcaaatc atatataacc aatccatcaa tgcctctatt ttctagcctt
      961 tctaactgct tttttgcaac tattattgct tcttcgtgag ttaaatttag tttaggaggc
     1021 gtcagaccgt ataacaaaat tcccggagta ttatctttta tcttcttttt cagcatattt
     1081 tttttacttt caaatttgct catcataaga tgagcaaaat atcaatacat atttctaact
     1141 taaacgaacg attttaaccg ctgcagtcat atttgtaaga ctaggtttga cctcttccca
     1201 ttttcttgtt tttagaccgc aatctggatt tatccaaagt tggctttttg gaagaacttc
     1261 tagtaaagcg tgaatttgag tagctatctc ttctacgcta ggaactcttg gactgtggat
     1321 atcataaact cctggtccta cttcttgttt atagccaact gatttgaata ttttaagtag
     1381 ctcgtttccg cttctagcag tttctatgct gataacatcg gcgtccatcg cttcaatggt
     1441 tttgatgata tcgttaaact ccgaataaca catatgggtg tgaatttggg tctccgcttt
     1501 agctgaacaa acgcttagtt taaagcaatc taccgcaaat ttttcataag cggatacatt
     1561 ttcatgtcta agcggatagc cttctttaaa cgcagcttca tcgacttgta tgattttgat
     1621 acctgcattt tgaaggtcgc ttatctcatc gtaaatacaa agtgcaagct cctttgctat
     1681 ctcgcttctt ggtttatcat ctcttacaaa gctccagttt aagatagtaa ccggtccagt
     1741 tagcatacct ttcatgatct tgtttgtttt gctttgagcg taacttatcc aatccacggt
     1801 catagctttt ggacgactca catcgccaaa aaggagcggc ggtttaacgc atctactacc
     1861 gtagctttgt acccaaccat tagtactaaa cgcgtatcct tttagctgct cgccgaaata
     1921 ctcgaccata tcattacgct caggctcacc gtgaactagt acgtctaaac cgcactcttc
     1981 ttgaaaagct atacactcat caatatattt tttgatatct ttttcataag cttcttgcga
     2041 tatcagagat tttttataag catttcttac ttgacggagc tccggagttt gcgggaaact
     2101 acctatagtc gtagtcggaa gctcaggaag attaaattta gctttttgag tttttatacg
     2161 ctcttcataa ggagtatctc tttcaaattt agataggttt tttactcttt cttgaacagt
     2221 tttatcattt actaactcag aagtctttct tgaagcgata gccgccctat ttttagcaag
     2281 caaaccctcg cctgattcac aaaaatgctc attatttgct agttttttta gtagttttac
     2341 ttcggttagt ttttctaccg caaagctaag ccactctttt atacttagtt tttcttcgta
     2401 ttttagagta tatggaacgt gtaaaagtga gcaagaggtg ccgatattta ggcgttcgct
     2461 tgagatatac tctttaatct tatttatcag ctcaagcttg gcgtcaaggt cacttaccca
     2521 aacgtttcta ccgtctataa gtccggcaaa cagaacttta tcgctatttt ttaggatctc
     2581 taaagaatct ttttggcaac ttgcatgtac aaaatcaagc ccaacgcccc aaactttagt
     2641 ttttacaatc tcttttacgg cttcgtttgc atgctcaaaa tacgtcataa atataatctt
     2701 aacattatca ttagtacata gcttttcata aactagaact attttatctt ttaatttttc
     2761 agctttatcg gtaacaaaga taggctcgtc tatctgaact acgacttcgt tatcaagctt
     2821 agaaatttca accaaaagct tagcgtactg ctctactaag gcgtctaaat gacaaagcgc
     2881 gcaacttccg tcagttgttt tactaagcgc taaaaacgtg ataggtccta tcaaatttat
     2941 ctttggagtg ataccctggg cttttgcttc tttatattcg tttaatattt ttgtaggatt
     3001 taggctaaat ttagtctctt tgctaagttc tggaactatg taatggtagt ttgtattgaa
     3061 ccattttgtc atttccatag ctacgcttgt tttgttgcct cttgccattg aaaagtatag
     3121 atcagttcca ctaagtccgt caaatctcgg tgggatcgct ccaaaagcta caatgttatc
     3181 aagcattaaa tcataataag aaaaatcgtt tgcgcttata aaatctatat gcgcatcttt
     3241 ttgatacttc cagtgtctta cttttagctc ttttgctatg cgctcaactt cgctaaaatc
     3301 gctcttaccg gcccaaaaac tctcaagcgc gaattttagc tctctttgct cacctattct
     3361 aggaaatcct gttataaaac tttttgacat atttaatcct tcgttaaaat acatattata
     3421 ctatataagg tcttagacca actaaattta aaaaatacaa gatttatttt agtaaaattt
     3481 acgcatctca aaaagaacta acggcggttt taatccgtgg agtttataga ataatttatc
     3541 atcgtctaag tataagaaaa aatgcttatg tagcagtgta aggcgagttt tgcgtttaaa
     3601 aatacagtta caatgaatag gaaaagtaac gataaaagct agatatgaaa atacgcttat
     3661 aaaagtaaat tctaaattaa gtataaattt aaaatctttt ttattttcta gtgctttgct
     3721 tattgctttg taggctaaca cacatgggac aactcatact tacgccttta tgattttaaa
     3781 atagttcgat gattgtaact aaaaaaatat aaaatttgac tgaaaataaa atatttatag
     3841 accattttat aaaatataaa aacatacata aaaactataa atttgtaatt gagtgagcta
     3901 aattacaaaa aaaacaaaca tcgcaagcaa cgtcgcagac gcaaacttta tctcacgcca
     3961 aacaacagta taataggttt tcgagatgta taacgactac aaagctgaaa gagacactgt
     4021 agacagatat tttcaaaagt atttaactgg cgataacgct tcttttgtta aatagcctaa
     4081 aatccaagat aatgcagctt atatagaaag attttattaa agccaccgga cttgagttta
     4141 gaaaacttaa aaagcgttaa aaataacttt gaaaaagata gggaaactac tataaaatat
     4201 tctaatgaat atcgatgata aaatctttaa aaaataaaca gtaacggaac atttgctctt
     4261 caatttagca gccaaagaga aattgtgata aatgagccct ataaaaatag caaaaaaaat
     4321 tcttgagtta gatacaaaag aagttcaaaa acttcttaga gttttggagt gggttttata
     4381 gtaaatttac gcggctaaaa ttcataaaaa ccgcgtaaat ttgataatca aaaagtacta
     4441 actctcttta aatagttttg aagcaagtat ttgcacttta tcttgatcgc tacctttttt
     4501 gagtgtttta aatactttat taagataatt ctcaaagaat tcatgattat ttaacgattt
     4561 ttcgttgtca gctctaatga cgctcgtata ttctccatca ttgcctaaat catacgaaag
     4621 atcattgtct attagctgta ctcttaatat ctcgcttaat ttaccttgta aaacactttc
     4681 atatatagga gtcatgagct caagacgtct ttctaaattt cttggcatcc agtctgcgct
     4741 tgatatataa aacttaggat ttgcatgttt aaaataaaat atcctagcgt gctcaaggta
     4801 ttttcctata atagagcgta cgcgtatatt ttcactcata ccttctacgg ccggtctaag
     4861 acaacaaatt cctcttatta taagatctat ctgaactcct gccctacttg cgttataaag
     4921 ctcttttatc acgtcgctat ctactaaagc attcatttta gcaattattt taccatcttt
     4981 gcccatcttt gcttcgtttt ttatcatctc tataactctt tcttttatct gcataggaga
     5041 catagataga gcatttaaac gacggttttt actaaatcca gataatatat gaaaaaacgt
     5101 tgtagtatct ttagcaaatt cttctctgct agtaaaataa cttacgtcgg tgtagatctt
     5161 tgcactactt ccgttgtaat ttccggtacc aagatgcata tagaatttta gcttgtcgcc
     5221 tatttgcctt attacttgag atacttttgc atgtacttta aatcccgtga taccgtatat
     5281 aacgtgtgct cctgcgtttt caagtgcttt tgcccagtga aggttatttt cctcatcaaa
     5341 tctagccttt agctctacca taacagttac ttgtttgcca tcgctcgcag cgtctatgag
     5401 agattgaatt atacttgagt ttttctctac tctatataaa gtcatacgta tagatataac
     5461 ttttggatct ttcgcagcct cttttataaa ctgcgttacc ggctcaaagc tctcatatgg
     5521 gtgaaaaagc aaaacgtctt ctttatctat tgcttcaaac attgagacgt tttgtccaaa
     5581 gggcggaagt gtttttggcg tatagggcgg aagtagtaaa tgagaaaatt ctttgtcacc
     5641 tataatttgc cataaagctc ctagagttag aggaatgctg tattcataga tatctttata
     5701 gaaaattttc atatgtaaat ttaaaaactc aagtatctcc ggatctggat ctttttcgat
     5761 ttgtaaacgt acaaaagcac cttttctgcg aagtttcaga ccttgctcaa gtataagcat
     5821 aaagtcatct gcttcttctt cttcgataac catatcagca tttctagtta ctctaaatgc
     5881 gcagctagca agaagtttat atccgggaaa tatctcttca gcgtggcgat gaactatact
     5941 ttcaatcggc acgtaaatac catctccggc gttgtaaaac ctaggaagca ctctgctgat
     6001 tcttatcatt ccaaacttaa ctatctccgg atgcgcttca tcacaaagct ttaccgcaag
     6061 tccaaaacta aggttattta agtgcggaaa cggatgagtt gcatcaactg ctataggcac
     6121 gataacaggt aaaatatttg aaaaaaagta atcatccgct ctagctttta tatcatcttc
     6181 taaatcttca tattttttta tatgcaaacc ggataaagat aactttgtaa ctgtttcttt
     6241 ataataatct tctaaaattt gttgttcatc ttttaggtat ttccttatct ctcttagctg
     6301 atcaagcggt gtcatctcat cacttccgct tactacgact ccagcagcaa aaagctgttt
     6361 aagacctgct atacgtatca tataaaactc atctaaattt gtcgaataaa tagctataaa
     6421 cttaagtttc tcaagtagcg gaagatcttt ttcgcactga gacaaaacac gtgaattaaa
     6481 tctaagccaa gatagctcac gattgataaa aatatctttg ttttccataa accaaccttt
     6541 taatttggca taattatact aaaaatgagt gaaaatttca cttaatattc taaatttaaa
     6601 atagaattat cattaaatta tgtaaattcg ggtaataaat tcatgataaa aagttcaaat
     6661 ttaatttttt tatagtctct cttaaaaaat ataaagccaa ccaaacaaca caaaacttag
     6721 ccgcaaacgg agttagccat actccgttta cttctaaaaa atttgtcaaa atatacaaaa
     6781 aaggtaaagg aataagcaaa ttcgcactta aagatatgct aagagagtaa gcaggtctat
     6841 ttaaagcagt aaaaaacgaa ttagcaaata taatgaacca tgaacataga tacaccggtg
     6901 aaaaaaccag taaagcctcc ttgctagctg ctataaattc gatatctctg ctaaaaaacg
     6961 aaactataaa atcgctacca aaagatatcg ccacaacaat cataactcca agagcgatag
     7021 cgccaaaaaa cgttcgccaa aacagagcca tgataaattt aatatttttc gcaccgtaat
     7081 aatagctaag aagaggctgc attccatcgc acatactaaa tatcaaagac gccataaaac
     7141 tatctatggc aaaaattacc tcaagtatag ccacgccccg cactcctgcg atatctagta
     7201 gcaaagcgtt tgccgcgatg acgaaaagcg atgtagagat atttgtcaaa aactctgaac
     7261 tgccattgta tattatgttt tttatgattt ttaaatttat aaacgctttg cttaatttta
     7321 actctaaatt tccaaataca aacggtgtaa atccaagcaa agtccctaaa ctaagtccga
     7381 tgcaagtagc taaagcggcg ctgaaaagtc cccattctaa aattactata aaaatatagt
     7441 ctaagactat atttataaac gcaacaaaga tatttacgca catactatat ataggttttt
     7501 tacaaattct aaggtagtta tctaacataa aacagagcat tatgactgga caaaacagcg
     7561 caaaaacctt agcatactgc gccgcaagta cagctaattc tttatcgtct atcaagtaat
     7621 tactaatagg ttctataaag aaaaaaccaa ataaaaacac aaagcacgca aagataaaaa
     7681 cagttatcaa actaaagcta aatatcccgc aagcttgttt aaatctaccg cttccaagac
     7741 gaagcgctat ttgtacagat gagcctactg ctatcatatc tatgagcgca aaacttatca
     7801 ttataaaagg catagtaagt cccatagctc caagcgcctt tgtacctatc atctgcccga
     7861 cgaatatagt atctatgata aaataaaacg agatgaaagc cgtgcttatc atatttggaa
     7921 aagcatattt tataaataat tttgtaggtt taaagctcat atcaactcct attttttaaa
     7981 ttttttgcta tttaaaaaat aaaacgctaa taaactccgt tgatagcttg tatgtataaa
     8041 tttaatttta agtataattt attttgacaa gcgtaccgat aagtcatcat aaatcacctt
     8101 ttttaaattt aaacaattat a
//
LOCUS       DAPPKW010000081         8030 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.081, whole genome shotgun sequence.
ACCESSION   DAPPKW010000081 DAPPKW010000000
VERSION     DAPPKW010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8030)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8030)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8030
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.081"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            758..1132
                     /locus_tag="RPW04_001613"
     CDS             758..1132
                     /locus_tag="RPW04_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group III truncated hemoglobin"
                     /protein_id="HDX6295699.1"
                     /translation="MKNNTINEQNIETLMDSFYDKIRVDKDLGDIFNAVIGTSDEDWE
                     VHKQKISDFWKGILFGSGVYNGNPLQKHFELLPFPKVFFTIWLGLFEDSLDEIYDEEN
                     KIIILQKAQMIANRFMHMLYND"
     gene            complement(1202..4729)
                     /locus_tag="RPW04_001614"
     CDS             complement(1202..4729)
                     /locus_tag="RPW04_001614"
                     /inference="COORDINATES: protein motif:HMM:NF037112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295700.1"
                     /translation="MHSKVNQAKKDNKFTVGIEELEKVNYESLNTTQKNIYDVFAGNK
                     SQTTLKVNDIDDLATLEQGSRNAGARKIIIKHAGKDKTGGLSGDELVSIEEVLLKGKI
                     NKDSFEMRKNSLRYAYSVENNGVKYSVVVDEFNDGKKIFDYYSDRNFIGKDKVANIKQ
                     QPDPNATLSNDDIIPQTTKAAKAEQILKSDNVEFLDGLKDTSTNKFYAEVQKQEKALQ
                     NQQQYLKDIDSFLQGLTLKNKERQILFTHGFSKDELIIARDKIIKQIEKDNKELAPFL
                     ALLRKKEANDKATSQTIKAQQERINIGKSMLSGFKEVYQDGIISDEQIVKTKGGIVSL
                     FNDPMANTPETRKYLLDSSFRNRIEKAYNISPIKEFGTNYAEFYHDGSNAIKKLLVEK
                     QGQVAGAFQRKELGDIDLVWGKYDTNTGDGYGLSKIIQKHSDFKIEYLIDTIQNGVIV
                     QGKHNRINIVGKKGVIVLEKNGSNNWVFNGFRQERTKTALEKLGKVRGENITTVPSEK
                     SLSQTETNADDIISQKAAKSNELSLADNIVSLSNKINDDFKQVSKYLNEYIDEKISIN
                     RSINRDFGIDTMRVEYVDHNGNYKFKNIKRIESIKDLEKLMKLRIRGDQFNAIISNSN
                     AKKITDNILEDLNQLKVLKAKQAELNKANAQANKDLEIKQKRENELNLYSIPEALRNN
                     EKLSDGLIALKKMFAKDYSDKGAYKYSIAKTHGIDENGFKNMLQENRRGLEKILNINP
                     IKEFGTNYAEFYHDGSNAIKKLLVEKQGQVAGAFEKDGKDITLVFGEVTDKAKHNGYG
                     LSHIIDKRMAQYMEQGFSKAAAYNMTIDFINKIPDIIQNGKLLNKKNEAIQILSNDAK
                     IVIKSNFYGEPTDKWIVTAYEKLEKDLDISAKPITKGTNSPLNSNTNIIPQNTKEVNP
                     TSNKVFANEHIGGGLVGGTLNGVETDENGNISFDPAKFALGFLAGAGGVAGIKRANKF
                     LADNPQFKQAFKDELAKTLSNGWEKAKAKNPLLKTLDTNSYIVPNEKGVSPEDVIKAS
                     QNLAEDDYHGINLKEQKSIKPVAEANSKITDTSIKAGEFAKPKGDSTYTKAWDSYERL
                     VDKGFDKLEELVKNTVKKGADLPGGAVSKILNNFLDFESGGKAVGEVFQNYRELTYKN
                     SSLSSKIYKGLSTLSNKNIKSLFHALFLE"
     gene            4820..5407
                     /locus_tag="RPW04_001615"
     CDS             4820..5407
                     /locus_tag="RPW04_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011372571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDX6295701.1"
                     /translation="MELKLNDTADIKTGLVLNRKKASMSEISKFYYDVVSLKSFNENG
                     IYEHIFADKFISNEQIKEDYLVKQGDILLRLREPNFAIYIDKEYKNLIYSSLVVRIKL
                     YDNRLDANFLTYYLNSNIVKKALHCEVSGTTIPMIKVSDINDIRIPIINLDKQKNIAK
                     YLKLAYQGNELLRNLIDQKQKYSKEIFETLVLQGE"
     gene            5413..6918
                     /locus_tag="RPW04_001616"
     CDS             5413..6918
                     /locus_tag="RPW04_001616"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009496266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HDX6295702.1"
                     /translation="MQNAVTLEKTTKKTIENIIWKACDTFRGTMDGSNYKDYILTMLF
                     VKYLSDFYKEKLELLKAEYGDKLERIEAKLKKEKFRLDESCTFDYFIANKEASNLGEI
                     INKALEKIEEDNRQKLNGIFRNIDFNSTAILGDTKQRNIILKNLIEDFSDDRLDLRPS
                     MLENNDIIGDVYEYLIAHFASNAGKKGGEFYTPSEVSTLLAKLVNPQEGDMIYDPTCG
                     SGSLLIKVSKEIHSKNFRLYGQEKNGQTHALCKMNMFLHEINDAVIEWGDTIRNPLHL
                     QNNLLKTFDIVVANPPFSLDKWGEEIASGDSFGRFKFGIPPKSKGDYAFVLHMLSSLN
                     SHGTMGVILPHGVLFRGSSEGKIRQKLIEQNLLDAIIGLPANLFYGTGIPACIMIFKK
                     NRTNNDVLFIDASSEFYKDKNQNRLNDALIAKIAKTYNDRISVDKYAYLATIEQIEQN
                     DYNLNIPRYVDTYEEEKPIDIQATKDEIKRIENELNLVQNKMTAYLKELGL"
     gene            6941..7156
                     /locus_tag="RPW04_001617"
     CDS             6941..7156
                     /locus_tag="RPW04_001617"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295703.1"
                     /translation="MNLSKKDIAASTMYSEVIDAAIPGLEDRISQIIKFTKDLLEEIL
                     RDLVYKFELSQTTKIKLYISIGGYDEQ"
     gene            7146..>8030
                     /locus_tag="RPW04_001618"
     CDS             7146..>8030
                     /locus_tag="RPW04_001618"
                     /inference="COORDINATES: protein motif:HMM:NF013579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDX6295704.1"
                     /translation="MSNSYKQTAVGRIPKEWEVVRLGDVFQRVTRKNTVNSDNVLTIS
                     AQNGLIKQENFFTKSVASKDLSNYILLEKGEFAYNKSYSSGYPMGATKRLNLYNYGVL
                     SNLYIYFKIKNGNSDFYEQYFEAGLLNKEIHQIAQEGARNHGLLNISVVDFFNILIAL
                     PPLKEQEKIADILSTWDMAISNLDELIIQKQKLKTALMQNLLSAKIRFKEFTAPWQEV
                     KLGDILDYEQPTKYIVNNVAYVNDMYKIPVLTAGKSFILGYTDETNGIYDKLPVILFD
                     DFTTDTKFVNFKFKVKSSA"
BASE COUNT         2588 a         1326 c         1261 g         2855 t
ORIGIN      
        1 acaaagagta gtaatatata aaatttagta aaattttaaa aagtaaatat atttatataa
       61 tgtttaggat actgctaata aatcaactcc aaaggttaga gtaggatttg ccataatttt
      121 ccttttttta tgttataata atttaaaaat aaaaggtagc caaatgacaa ccaaaaaaag
      181 ccatacccca aaaaaaggtt ttgtatcttt tgggattttt taatactctt tggatttaag
      241 gctgcgatta aatatctttt tacaagagaa tattaactct catttatcct tttagctatc
      301 tcaaaataat caataaactc atttaagctc attgataaaa tttcattaaa accaaaatgc
      361 agggtataac cgattaaggc tataccatca cttagttttt tgtttcaacg ccaactaatt
      421 tacttatttt ttcgcttaat gcggcgattt cgctcatagg tagggcgttt ataaaatatg
      481 tatttgaaag gatttttcaa ggtataaaaa taagccgaga tgatgcttat ttgctcaaaa
      541 tagttattac acaaaatcac ctgataaagt cgtctattta taatatgatt tggaatggtg
      601 tatttgtttt ttaagagtat ttccgctttg gatttttagt ggattttaca ttttatttta
      661 ttaagcaaat cgcagaatac aaaaatttac tcttgatata aaacaacttt tatctgtttc
      721 aaatttgtta taatcgttca aatttaaaag gataaaaatg aaaaataaca cgataaatga
      781 gcaaaacatt gagactctta tggatagctt ttatgacaag atcagagtag ataaagattt
      841 gggtgacata tttaatgcgg ttatcggtac gagcgatgag gattgggaag ttcataaaca
      901 aaaaataagc gacttttgga aaggaatact ttttggctcg ggcgtttata acggcaatcc
      961 tttgcaaaaa catttcgagc tgctgccttt tccaaaggtg ttttttacca tctggctagg
     1021 gctttttgaa gatagtttag atgagattta tgatgaagaa aacaaaatta tcattttaca
     1081 aaaagctcaa atgatagcaa atagatttat gcatatgctt tataatgact aattaaattt
     1141 aaacctatat aataaaaact taagtgttat ttatagtatt attttgcttt tatgcatctt
     1201 tttactccaa aaacagcgca tgaaataatg attttatatt cttattacta agtgtactta
     1261 gtcctttata aatttttgat gataaactag agtttttata tgtaagctca cggtagtttt
     1321 gaaacacttc cccaacagcc tttccgccag attcaaaatc aagaaagtta tttaggattt
     1381 tgctcactgc cccgcctggt aaatcagctc cttttttgac tgtatttttg actaactcct
     1441 ctaatttgtc aaatccttta tctactagtc tctcatagct atcccacgcc ttagtatatg
     1501 tgctatcacc ttttggctta gcaaactcac cagctttgat acttgtatct gttattttag
     1561 agtttgcttc tgccactggc tttatgcttt tttgctcttt taaatttata ccgtgatagt
     1621 catcttcagc caaattttgg ctagctttta tcacatcttc ggggcttaca cctttttcgt
     1681 ttggcactat gtagctgttt gtatcaagag ttttaagcag tggattttta gcttttgctt
     1741 tttcccagcc gttgcttaga gtttttgcta gctcatcttt aaaggcttgt ttgaattgtg
     1801 gattatcagc tagaaattta tttgctcttt ttataccagc cactccacca gcaccagcta
     1861 aaaatcccag tgcaaactta gcaggatcaa agctgatatt tccattctca tcagtttcta
     1921 cgccattaag cgtaccacct actaagccac caccgatatg ctcattagca aaaactttat
     1981 ttgaagttgg atttacttct ttagtgtttt gtggtataat gttggtatta gagtttaaag
     2041 gcgaattcgt gcctttggta ataggcttag cggatatatc taagtctttc tctaatttct
     2101 cataagccgt aactatccat ttatctgtag gctctccgta aaaattagat tttataacta
     2161 ttttagcatc attacttaaa atttgaatag cttcgttttt cttatttaat aattttccat
     2221 tttgtattat gtctggtatt ttattgataa aatcaatagt catattatac gccgctgctt
     2281 tgctaaaccc ttgctccatg tattgagcca ttcgcttatc tatgatatga gataaaccat
     2341 atccattatg ttttgcctta tcagtgactt ctccaaaaac taaagttata tctttgccat
     2401 ctttctcaaa agctccagct acttgtcctt gtttttctac taatagcttt ttgatagcat
     2461 tagatccgtc gtggtaaaac tctgcgtaat tagtgccaaa ctctttaata gggttgatat
     2521 ttaatatttt ttctaagcct cgcctatttt cttgaagcat atttttaaag ccattttcat
     2581 ctatgccgtg agttttagct atgctatatt tataagcacc tttatcagaa taatctttag
     2641 caaacatctt tttaagcgct attaatccat cacttaattt ttcattattg cgaagtgctt
     2701 cggggataga gtataaattt agctcatttt ctcttttttg ttttatctct aaatctttgt
     2761 tagcttgtgc attggctttg tttaattcgg cttgttttgc ttttaacact tttaattgat
     2821 ttaagtcttc aaggatatta tctgttattt ttttagcatt agaattagat attattgcgt
     2881 taaactggtc acctcttata cgaagtttca ttaatttttc taaatctttt atactctcta
     2941 tacgtttaat atttttaaat ttgtagttgc cattatggtc gacgtattct actctcattg
     3001 tatcaattcc aaaatctcta tttatagacc tattaataga tattttctca tctatgtatt
     3061 cgtttaaata tttagaaact tgtttaaaat catcatttat tttattactc aaactcacaa
     3121 tattatctgc taaacttagc tcattgcttt tcgctgcttt ttgggatata atgtcatcag
     3181 cgttagtttc tgtctgagat agtgattttt cactcgggac agttgtaata ttctcgccgc
     3241 gcactttacc gagtttttct aacgctgtct ttgttctttc ttgtctaaac ccattaaata
     3301 cccaattgtt tgagccattt ttttctaaaa ctataacccc ttttttacca acgatattaa
     3361 tcctattatg tttgccttgc acgataacgc cattttgtat agtatctatc aaatactcta
     3421 ttttaaaatc actatgtttt tggataatct tacttagtcc atagccatca ccagtatttg
     3481 tatcatattt tccccaaact aaatcaatat cgcctagctc ttttctttga aacgctccag
     3541 ctacttgtcc ttgtttttct actaatagct ttttgatagc attagatccg tcgtggtaaa
     3601 actctgcgta attagtgcca aactctttaa taggggatat gttgtaagct ttttctattc
     3661 tatttctaaa tgagctatcc aaaagatatt ttcttgtttc tggagtatta gccatagggt
     3721 cattaaaaag gctaacaatc ccgcctttgg ttttaactat ttgctcatcg cttataatgc
     3781 catcttgata tacttcttta aagccactca gcattgattt gcctatatta atgcgttctt
     3841 gttgcgcttt aatcgtctgc gatgttgctt tatcgtttgc ttcttttttg cgtaataaag
     3901 ctaaaaatgg ggctaactct ttgttgtctt tttcgatttg ttttattatt ttatctcttg
     3961 caataattaa ttcgtctttg ctaaatccgt gcgtgaagag aatttgcctt tctttgtttt
     4021 taagcgttaa gccttgtaag aagctatcaa tatcttttaa atattgttgt tgattttgaa
     4081 gggctttttc ttgcttttgg acttctgcgt aaaatttatt tgtggatgta tcttttagcc
     4141 catctaaaaa ctctacatta tcacttttta ggatttgctc tgctttagct gcctttgtag
     4201 tttgtggtat aatgtcatca ttggacaagg tagcatttgg gtcaggttgt tgcttgatat
     4261 ttgctacctt gtctttacct ataaagtttc tatcgctata ataatcaaat atctttttac
     4321 cgtcgttaaa ttcatcaact actacgctat attttacgcc gttattttct acgctataag
     4381 catatctaag gctatttttt ctcatctcaa agctatcttt atttattttg ccttttaata
     4441 atacttcttc tatgcttaca agctcatccc cactaagccc accagtttta tcttttcctg
     4501 cgtgtttgat gattatcttt ctagcgccag cattgcgact tccttgctct agtgtagcta
     4561 aatcgtcgat atcatttact tttaatgtag tttggctttt atttccagca aatacatcat
     4621 aaatattttt ttgagttgta ttcaagcttt cataatttac tttttcaagc tcttctatcc
     4681 caacagtaaa tttattatct tttttagcct gatttacttt agagtgcaaa aactcttgac
     4741 ttttacattc tcatttgtta tactttcata attaatgtat tattataaca ataatacatt
     4801 aattataagg ataattttta tggaattaaa gctaaatgat acggcagata taaaaaccgg
     4861 attagttctc aatagaaaaa aagccagtat gagtgaaata tcgaagtttt attatgatgt
     4921 tgtttcctta aaatcattta atgaaaatgg tatatatgaa catatttttg cagataaatt
     4981 tatctcaaat gaacaaatca aagaggatta tttagtgaaa caaggagata ttctcttaag
     5041 gcttagagag ccaaattttg caatatatat agataaagaa tacaaaaatc ttatatattc
     5101 ttctttagtt gttcgcataa aactttatga taacagactc gatgcaaatt ttttaactta
     5161 ttatttaaat agtaatatag ttaaaaaagc acttcattgt gaagtatcgg gtacaactat
     5221 accgatgata aaagtttctg atataaatga tataaggata cctattataa atttagacaa
     5281 acaaaaaaat atagcaaaat atctgaaact tgcttaccag ggaaacgagc ttttacgaaa
     5341 tcttatagat caaaaacaaa aatactcaaa agaaattttt gaaacattag tactacaagg
     5401 agaatgatca aaatgcaaaa tgcagtcact ttagaaaaaa caaccaaaaa aacgatagaa
     5461 aacatcatct ggaaagcttg tgatactttt cgcggtacga tggacggaag caattataaa
     5521 gattatatcc ttactatgct ttttgtcaag tatctatctg acttttacaa agaaaaacta
     5581 gaacttctaa aagccgagta tggcgataaa cttgaacgta tagaagccaa gcttaaaaaa
     5641 gagaaattta gacttgatga gtcttgcacg tttgattatt ttatagccaa caaagaagca
     5701 tcaaaccttg gagaaatcat aaataaagct cttgaaaaga tagaagaaga caacagacaa
     5761 aagttaaatg ggatatttcg caatatagat tttaatagta ccgctatcct tggcgacaca
     5821 aaacaaagaa atatcatact taaaaatctc atagaagatt ttagcgatga tagacttgat
     5881 ctgcgtccat ctatgctaga aaacaacgac atcataggcg atgtttatga gtatcttata
     5941 gcgcactttg ctagcaatgc aggcaaaaag ggcggtgagt tttacactcc tagcgaggtt
     6001 tcaactctcc tagctaagct tgtaaatccg caagaaggag atatgatata cgatcctact
     6061 tgtggtagcg gctcactgct tatcaaggtt tcaaaagaga tacatagtaa aaatttccgt
     6121 ctttacggac aagaaaaaaa cggacaaact catgcgcttt gcaagatgaa tatgtttttg
     6181 cacgagataa atgatgcggt tatcgagtgg ggcgatacga tacgaaatcc cttgcacttg
     6241 caaaataatc ttcttaaaac atttgatata gttgtggcaa atccaccatt tagcctagat
     6301 aaatggggtg aagagatagc gagtggcgat agttttggaa gatttaaatt tggtatcccg
     6361 ccaaagagca agggggacta tgcttttgta cttcatatgc taagctcact aaactcacat
     6421 ggtacgatgg gtgttatctt gcctcacggt gtacttttta gaggttctag cgagggtaag
     6481 atccgccaaa aactcataga acaaaatttg ctagatgcca tcataggact gcctgcaaat
     6541 ttattttatg gtactgggat acctgcttgt atcatgatat ttaagaaaaa ccgcacaaat
     6601 aatgatgtgc ttttcataga tgcgagtagt gaattttaca aagataaaaa ccaaaacagg
     6661 ctaaatgacg cccttatcgc taaaatcgca aaaacatata acgacagaat aagcgtagat
     6721 aaatacgcct atctagccac tattgaacag atcgagcaaa atgattacaa cctaaatata
     6781 ccaaggtatg tagatacgta cgaagaagaa aagcctatcg acatacaagc tacaaaagac
     6841 gagataaaac gcatcgaaaa cgagctaaat ttagttcaaa acaagatgac cgcatatcta
     6901 aaggagcttg ggttataaat aaagtatcaa ggataaaatt atgaatcttt ccaaaaaaga
     6961 tatagccgca agtacgatgt atagcgaagt catagacgcg gcgatcccag gtcttgaaga
     7021 cagaatttct caaatcataa aatttacaaa agatttgctt gaagaaattt tacgcgattt
     7081 ggtttataaa tttgagctaa gccaaacgac gaaaataaaa ttatatatat cgataggtgg
     7141 atacgatgag caatagctac aaacaaacag ccgtgggacg catcccgaaa gagtgggaag
     7201 ttgttaggtt gggagatgtt tttcagcgag ttactagaaa aaataccgtc aatagcgata
     7261 atgttcttac aatatcggct caaaacggtc tgataaaaca agaaaatttt tttacaaaaa
     7321 gcgttgcaag taaagatttg agtaattata tcttgttaga aaaaggagaa tttgcctata
     7381 ataaaagcta ctctagcgga tatccaatgg gggcaacgaa gcgtttaaac ttgtataatt
     7441 atggcgtgtt atcaaattta tacatatatt ttaaaatcaa aaatggaaat agcgattttt
     7501 acgagcagta ttttgaagcc ggactcttaa acaaagaaat acatcaaatt gcacaagaag
     7561 gagctagaaa tcacggatta ttaaatatat ctgttgttga tttttttaat attttaatag
     7621 cacttccgcc gttaaaagag caggagaaaa tagcggatat tttatctact tgggacatgg
     7681 cgatatcaaa tttagatgaa ctaatcatcc aaaaacaaaa gctcaaaact gccctaatgc
     7741 aaaatctact ctccgccaaa atccgcttca aagaattcac tgccccttgg caagaagtta
     7801 aacttggcga tattttagat tatgaacaac caacaaaata tattgtaaat aatgttgctt
     7861 atgtaaatga tatgtataaa attccggttt taactgccgg aaaatctttt atacttggtt
     7921 acaccgatga gacaaatgga atttacgata aattaccggt tattttattt gatgatttca
     7981 cgactgatac taaatttgtt aattttaaat ttaaagtaaa gtcatccgct
//
LOCUS       DAPPKW010000082         8015 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.082, whole genome shotgun sequence.
ACCESSION   DAPPKW010000082 DAPPKW010000000
VERSION     DAPPKW010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 8015)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8015)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8015
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.082"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            22..2058
                     /locus_tag="RPW04_001619"
     CDS             22..2058
                     /locus_tag="RPW04_001619"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012801.1,HMM:NF019335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDX6295705.1"
                     /translation="MSCALSSVLFGADGVYDLGRIEVTTPNQKQTIAEGSDAVVTQKE
                     IAESLSTSVDQAIRNTPGVYTTPYALGSRGEADIGIRGFGRTQIGLFIDGIPVNSIYD
                     RQTDWSQFNTYDVSQIDVAKGFVSPIYGINSMGGAVNIISTKPTKELEAGLKYGLLSG
                     KENQIGANVGTNQGNWYSSFSYSLVDRDSFPLSNDYKPTDYQPGDKARNSYYKNQTFK
                     AKVGFEPSEGSEYSLNAVIQRGEKGGTVNANGNGRFWDWPNYDKNTVYFLGQTQINDK
                     WSLNSKIYWDNFYNVLHMKGGVGKNGTITPAGFRGVSIYDDHSFGLIETAKYQIDDTK
                     ELQFGANLRYNHTNNDNYNFVDANKGNFSQGNFTDADEYKDFQTSLFVQFGHQLNDTW
                     RYVVSAGYDRVDTITAIRKRSATSDGKLDYEVDLWDWNAQTIFFADWDNANTTHFNIG
                     KKNNLPTLKTRYGTPWGARIPNPNLDTESIYNTEIGHKFDNGSTMLGATAFYNILKNS
                     IITVNGLKGCDNPDKKNGCSMLDNANGGYSYGLELSAEQRLFNDRVNIGANYTYTQKH
                     TSADSNNGIALNKIQDYPNHIANAFISYSPVKQVDLVLSGTYRSAQWTYDEMTGYENQ
                     NDDVFLMDLKANFRPYKSLELSVGATNLLDENYQYNGGYYMAGRRFFVTAEYKY"
     gene            2058..3005
                     /locus_tag="RPW04_001620"
     CDS             2058..3005
                     /locus_tag="RPW04_001620"
                     /inference="COORDINATES: protein motif:HMM:NF012517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDX6295706.1"
                     /translation="MKHGIFALFENLENDEKKSFKEAFKTIKFIEKLGFNEAWISEHH
                     FNSFSLTSSPVALAAYALAKTKSLKIGVAGFILPAYDTLRLASDIANLEAISGGRLIT
                     GFAKGSFPIIDKVQGRDPNLNRKIMLEKLDELNLMFDELNITPKVSKPQFYMASVHDE
                     SLGFAARRGYPILASIRSSIDDVLSIKERYKKIAGFYPKMGLIRAINIGQNQAKSSLE
                     ANKAISFFFKAMTGAQNEDTFEMVKGSEYEKLRNEFFDPKLLQKFAITGDVKECKKQV
                     LELVKVTKIDHILLKPAALSYKRHKEILKDYARKIMPYV"
     gene            2998..4011
                     /locus_tag="RPW04_001621"
     CDS             2998..4011
                     /locus_tag="RPW04_001621"
                     /inference="COORDINATES: protein motif:HMM:NF013648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDX6295707.1"
                     /translation="MFKFLLLCFLAIAANDGLILGKFECQNCENLKPENIKKVYASNP
                     TLLYSLYSFDKSLIAGLVFEFWDIEKRYLDKNVYSLPVVGGFYGQGRVPNIERVLSLK
                     PDLIITGQNTKDDPKYGGIFRSLKIPVLYIDDEDSFGVQVYKAFGEIFGNQKRADELI
                     AYANQSQKMADSLAKLSLDKPSVYYAFGKGGLETECGSSSFIKLVDLAGGDTAKFKCK
                     SKNKMSRVKADFEKILAANPEVILVYEKEFFEKIWSDKKWNLINAVKNKRVYLIPRSP
                     FSWVGKPASFTKLLGLRWLMDVLHKDALGLDIRREASEFYKLFLYADLNKDDLDFILN
                     EKN"
     gene            3998..4978
                     /locus_tag="RPW04_001622"
     CDS             3998..4978
                     /locus_tag="RPW04_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDX6295708.1"
                     /translation="MKKISFIFLFALLAIFSVISLTNGKFDISMSEYLRVFTGIFSGE
                     ESPASVIVLDIRLPRVIAAIIIGAALGVAGGAYQNMFINPLVSPSILGVLSGASFGAA
                     LAMVMGFGVFYQMWLTFIFGFAAVFLAVMIAVFGGSKNMIMLVLGGVISSSLFSSFLA
                     VLKYAADPNETLPAITYFLMGSLSFATKDVVFAVFIPMVFGTLSLVLLGKQIDALSMG
                     EEEAKSLGVNVRTLKICIIFFATLISALSVMLAGIIGWIGLIVPHIARFIYGANSRTM
                     LFSSAFIGALFLLICDLLSRELFTYEVPIGIVSSFFGIPIFLAVLLRRRA"
     gene            4975..5703
                     /locus_tag="RPW04_001623"
     CDS             4975..5703
                     /locus_tag="RPW04_001623"
                     /inference="COORDINATES: protein motif:HMM:NF014516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6295709.1"
                     /translation="MIKLVNLSVKYAKKEVLNQICFEFEGGILNILGENGSGKSSLLK
                     ASLGLVKFRGNVLINGADLCSFNPKELAKLISYIPQSNYTPFNYSVLDMVLMGRLAYK
                     GLFDNYSKNDRLIAMESLERLGIINLADDEFLNLSGGQKQLVLIARALASRAKTIIMD
                     EPVNGLDFGNQIRLLEMIKKVAANGCNFIITTHHPRHAKFIGGRAILVKNGEIFKDTS
                     SELLDSSLISKLYGVNYKKYEELL"
     gene            5700..6491
                     /locus_tag="RPW04_001624"
     CDS             5700..6491
                     /locus_tag="RPW04_001624"
                     /inference="COORDINATES: protein motif:HMM:NF013382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDX6295710.1"
                     /translation="MMMSSNYDEIDFAKLYIEQKKISTFKPKSSTDWDKKASSMNERV
                     HKSYYVDEFVSKIKFDKSTTVLDMGCGPGTIGLKLAKDVKNVLCCDYSDEMLKCVKSN
                     AANLGLDNVKVKKLSFEDSWEELPKYDIIIASRCLEVSDAKDALTKLISKANRAVYIT
                     YNIGKTFLGDEISEIISSKVYPKPDYIYILNILYQMRYLAKVDFISHSDCKFKTETFD
                     EFIAAVQWSYGDKVNDVDKQNLKVYYEKNRTTYKEMNWAFIEILV"
     gene            6502..6930
                     /gene="exbB"
                     /locus_tag="RPW04_001625"
     CDS             6502..6930
                     /gene="exbB"
                     /locus_tag="RPW04_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HDX6295711.1"
                     /translation="MEIVLFLKQNIDYIIMGILGFMSFFALYFTIERALFYSFVDIGH
                     FKSIKSLEMALTKNLTFLYVIYSNAPYVGLLGTVCGIMITFYDMGASGNINANTIMMG
                     LSLALKATALGIAVAIPTLAIYNLLNRKVDILLAKFEETL"
     gene            6927..7307
                     /gene="exbD"
                     /locus_tag="RPW04_001626"
     CDS             6927..7307
                     /gene="exbD"
                     /locus_tag="RPW04_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013022647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HDX6295712.1"
                     /translation="MRLPKNDSLNIVPFIDIMLVLLCIVLSISTFIASGHLKLSLPNA
                     NSSMKNMKKSRTVIIVDDQNNLYFNDILVDKEALRSEIFKLGNSELIEIKSDKESKFE
                     TFVWIIDILKEKNHENFSIVTKNN"
     gene            7273..>8015
                     /locus_tag="RPW04_001627"
     CDS             7273..>8015
                     /locus_tag="RPW04_001627"
                     /inference="COORDINATES: protein motif:HMM:TIGR01352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HDX6295713.1"
                     /translation="MKIFPSSQKTISINLIAFLISTALHVCAFAYALNLDIKLPKEQS
                     EQSFKLPLAKFETPINSVKTEEAREPQQPKKEQKKQIIDEAKPKNEIVKKPLPKPKKV
                     EKKQISKENTKAPNQYIKNQTYEKIPPEIPLNSNNIDTNQTQSIKSSSLTKSSSENSS
                     LKSGENSSNIVYLKSNDELFIKIKNEIIKNVIYPKVAKRLGYQGVVKVEFILDKNGLK
                     SYGLKSESSFNSLNEAAIQALKKASSNFP"
BASE COUNT         2779 a         1195 c         1634 g         2407 t
ORIGIN      
        1 tgtatgaaaa aagcatttat tttgagttgt gcccttagtt cggtactatt tggagcagat
       61 ggagtttatg atcttggtcg tatcgaggtt actacgccaa atcaaaaaca aaccatagca
      121 gaaggaagtg atgcggtagt cactcaaaaa gagatcgcag agtctctttc aactagcgta
      181 gatcaggcga tcagaaatac tcctggtgtg tatacgactc cttatgcatt aggatctcgc
      241 ggtgaagcag atataggtat tcgtggattt ggtcgtacac aaataggact atttatagat
      301 ggaattccag taaactcgat ctatgatcgt caaaccgact ggtcgcaatt taatacttat
      361 gacgtatctc aaatcgatgt agcaaaaggc tttgtaagtc cgatttatgg tataaactca
      421 atgggaggcg ctgtaaatat catcagcact aaacctacaa aagagcttga agccggacta
      481 aaatacggat tattatccgg caaagaaaat caaatcggtg caaatgtcgg tacaaatcaa
      541 ggaaattggt attctagttt tagttactct ttggttgatc gtgatagttt tccgctttca
      601 aacgactaca aacctactga ttatcagcct ggcgacaaag caagaaatag ctactacaaa
      661 aatcaaacat tcaaagcaaa agtcgggttt gagccaagcg agggtagtga gtattcactt
      721 aacgccgtta tccaaagagg tgaaaaaggc ggtaccgtaa atgcaaatgg caacggtcgt
      781 ttttgggatt ggccaaatta cgataaaaac actgtttatt ttttaggtca aactcagata
      841 aatgataaat ggagtttaaa ctcaaagatt tattgggata atttttataa cgttttgcat
      901 atgaagggcg gcgtcggaaa aaacggaacc atcactcctg ccggatttag aggcgtaagt
      961 atctatgatg atcatagttt tggtttgata gaaacagcaa aataccagat agatgataca
     1021 aaagagcttc aatttggcgc aaatttacgc tataaccata cgaataacga taattataac
     1081 tttgtagatg caaataaagg caactttagt caaggtaatt ttactgatgc tgatgagtat
     1141 aaagacttcc aaacttcgtt atttgtgcag tttggccatc agttgaacga tacttggcgt
     1201 tatgtggtat ctgctggata tgatagagtg gatactataa ctgctataag aaaacgctca
     1261 gctacaagcg atggaaaact ggattatgaa gtggatttgt gggattggaa tgctcaaact
     1321 atattttttg ctgattggga caatgcaaat acaacccact tcaacatagg taagaaaaat
     1381 aatttaccta ctctaaaaac tcgttacggc acaccatggg gagcaagaat accaaatcca
     1441 aatttagata cagaatcaat ctataatacg gaaataggtc ataaatttga taacggttct
     1501 acgatgcttg gagcaactgc attttacaac attttaaaaa actctatcat aactgtaaat
     1561 gggctaaaag gctgtgataa tcctgataaa aaaaatggct gctctatgct agataatgca
     1621 aacggcggtt atagttacgg tcttgagcta tcagccgagc aaagattgtt caatgataga
     1681 gtaaatatag gagcaaacta tacttatacg caaaagcata cttcagcaga cagcaacaac
     1741 ggtatagcgt taaataaaat tcaagactat ccaaatcaca tagcaaatgc atttatctct
     1801 tatagcccgg ttaaacaagt tgatttggta ttaagcggaa catacagaag tgcgcaatgg
     1861 acttatgatg agatgaccgg atatgaaaat caaaacgacg acgtgttttt aatggattta
     1921 aaagcgaatt ttagacctta caaatctctt gagttaagcg taggagctac aaatttactt
     1981 gatgaaaact atcaatacaa cggtggctat tatatggccg gtagaagatt ttttgtaact
     2041 gcggagtata agtactaatg aaacacggaa tctttgcgct atttgaaaat ttagaaaatg
     2101 acgagaaaaa gagttttaaa gaggcgttta aaactataaa atttatagaa aaattaggtt
     2161 ttaatgaagc gtggataagc gagcatcatt tcaacagttt ttctcttact tctagtccgg
     2221 ttgcgctcgc agcctatgct ctagcaaaaa caaaaagcct caaaatcggc gttgcgggat
     2281 ttatccttcc tgcttatgat acgctccgtc tagctagtga tatagcaaat ttagaagcta
     2341 tcagcggcgg tagattaata actggttttg caaaaggctc gtttcctatc atcgataaag
     2401 ttcaaggtag agatccgaat ttaaatagaa aaattatgct tgaaaaatta gatgagttaa
     2461 atttaatgtt tgatgagctt aacatcactc caaaagtgtc taaaccacag ttttatatgg
     2521 caagcgtaca tgatgagagc ttgggatttg ccgctagacg tggatatcct attttagcga
     2581 gcattagatc aagtatagac gatgttttga gcataaaaga gcgttataaa aaaatagccg
     2641 gattttaccc gaaaatggga ctgatcagag ctattaatat aggtcaaaat caagccaaat
     2701 caagtcttga agctaacaaa gctatcagct ttttctttaa ggcgatgacc ggagcgcaaa
     2761 acgaagatac gtttgaaatg gtaaaaggca gtgagtatga aaaacttaga aatgagtttt
     2821 ttgatcccaa attgctacaa aaatttgcca taacaggaga cgtaaaagag tgcaaaaagc
     2881 aggttttaga gctagtgaaa gttactaaaa tagaccatat tttattaaaa ccagcagcct
     2941 taagctacaa acgtcataaa gaaattttaa aagattatgc tagaaagata atgccttatg
     3001 tttaaatttt tactcttgtg ttttttggct atagcggcta atgatggttt gattttaggt
     3061 aaattcgagt gtcaaaactg cgaaaatcta aaacctgaaa atatcaaaaa agtctatgcg
     3121 agcaatccaa ctctgcttta ttcactttat agttttgata aaagcttgat agcagggctt
     3181 gttttcgagt tttgggatat cgaaaaaaga tatcttgata aaaatgtgta tagtttgcct
     3241 gttgtgggtg gattttacgg gcaaggtaga gtgccgaata tcgaaagggt attaagctta
     3301 aaacccgatc tcatcataac cggccaaaat acaaaagacg atccaaaata cggcggtatt
     3361 tttagatctc ttaaaatacc tgtgttatat atagatgatg aagatagttt tggagttcaa
     3421 gtatataagg catttggcga gattttcggc aaccaaaaaa gagcggacga actgatagct
     3481 tacgctaacc aaagtcaaaa aatggctgat agtttagcaa aactaagttt agataagcca
     3541 agcgtttatt acgcttttgg aaaaggcgga cttgagacgg agtgcggaag ctcgagtttt
     3601 atcaaacttg tagatctagc tggaggtgac acggctaagt ttaagtgcaa atcaaaaaac
     3661 aaaatgagcc gcgtaaaggc agattttgaa aagatcttag cggcaaaccc tgaagtcata
     3721 ctagtctatg aaaaggaatt ttttgagaaa atttggagcg ataaaaagtg gaacttaata
     3781 aacgcagtaa aaaataaaag agtttatctc atacctagaa gcccgttttc atgggtcgga
     3841 aaacctgcaa gttttacaaa acttttgggg cttaggtggc ttatggatgt tttgcataaa
     3901 gacgctttag gcttagatat caggcgtgaa gctagtgagt tttacaagtt atttttatat
     3961 gcggatctaa acaaagacga cctggatttt atattaaatg aaaaaaatta gttttatttt
     4021 tctttttgct ctgctcgcta tatttagcgt tatatctttg acaaacggta aatttgatat
     4081 aagtatgagt gaatatctga gagtttttac ggggattttt agcggcgaag agagtccggc
     4141 ctctgttatc gtacttgata tcaggcttcc tagggtgatc gccgctatca tcataggtgc
     4201 ggctcttgga gtagctggcg gcgcttatca aaatatgttt ataaatcctt tggtaagtcc
     4261 gtctatactt ggagttttga gcggtgctag ttttggcgcg gcacttgcta tggtgatggg
     4321 ttttggcgta ttttatcaga tgtggcttac ttttattttt ggtttcgcgg ctgttttttt
     4381 agcggtgatg atcgctgtat ttggcggtag caaaaatatg ataatgttag tgcttggcgg
     4441 cgtgatatca agctctcttt ttagctcgtt tttagcagtt ttaaaatacg cagcagatcc
     4501 taacgaaacg cttcctgcaa taacttattt tcttatggga agcctgagct ttgcgacaaa
     4561 agacgttgtt tttgcggttt ttatacctat ggtttttggt actttatctc ttgtacttct
     4621 tggcaaacag atagacgctc ttagtatggg cgaagaagag gcaaaaagcc ttggggtaaa
     4681 tgtgagaacg cttaaaattt gcattatatt ttttgctact ttgatatctg ctttaagcgt
     4741 gatgttggcc ggtatcatag gctggatagg gcttatcgtg cctcatatcg ctagatttat
     4801 ttatggagca aactcacgca ctatgctttt tagttcggca tttatcggag ctttgttttt
     4861 actgatttgt gatcttttaa gtcgtgagct ctttacttac gaagtcccca taggtatagt
     4921 ttcaagcttt tttggaattc ctatcttttt agcagttttg cttaggagaa gagcttgata
     4981 aagttagtaa atttaagtgt gaaatatgct aaaaaagagg tattaaatca aatttgcttt
     5041 gagtttgagg gtggaatatt aaatatactt ggcgaaaacg gttctggtaa atcgagcctt
     5101 ttaaaagcta gtttggggct tgttaaattt agaggaaatg ttttgataaa cggagccgat
     5161 ttgtgctctt ttaatccaaa agagctggca aaactcataa gctacatacc tcaatcaaac
     5221 tacactccat ttaactatag cgtacttgat atggttttga tgggaagact tgcatataaa
     5281 gggctttttg ataattactc taaaaacgac cgacttatag ctatggaatc tttagagaga
     5341 cttggtataa taaatttagc cgatgacgag tttttaaacc ttagcggagg acaaaaacag
     5401 cttgttttaa tagctagagc tctagctagc agggcaaaaa ctatcataat ggacgagcca
     5461 gtaaacggac ttgacttcgg taatcaaata aggcttttag aaatgataaa aaaagtagcg
     5521 gctaatggtt gtaattttat cataaccaca catcatccaa gacatgctaa atttataggc
     5581 ggaagggcga ttttggtaaa aaacggtgag atatttaaag acacttctag tgagctttta
     5641 gatagctctt tgatatccaa actatacgga gttaattata aaaaatacga ggaattacta
     5701 tgatgatgag ttcaaattac gatgagatag actttgcaaa gctttatata gagcaaaaaa
     5761 agataagcac ttttaagcca aaaagcagca cagactggga taaaaaagct tctagtatga
     5821 atgagagagt tcataaaagc tattacgttg atgagtttgt gagtaaaata aaatttgata
     5881 aatctactac cgttttagat atgggatgtg gccctggaac gataggatta aagcttgcaa
     5941 aagacgttaa aaacgtgctt tgttgtgatt atagtgatga aatgcttaaa tgcgttaaat
     6001 caaatgcggc aaatttaggt ttagataatg taaaggttaa aaaactatcg tttgaagata
     6061 gctgggaaga gcttccaaaa tacgatataa tcattgcttc aagatgtctt gaagtaagtg
     6121 atgcaaaaga cgctttaaca aaacttatta gcaaagcaaa tagggcagtt tatataactt
     6181 acaatatcgg aaaaactttt ttaggcgatg aaataagtga aattataagc tccaaagtct
     6241 atccaaagcc tgattatatc tatattttaa acatacttta tcaaatgcgt tatcttgcga
     6301 aagtagattt tataagccat agtgattgta aatttaaaac agaaactttc gatgagttta
     6361 tagcggcggt gcagtggagt tatggagaca aagtaaatga cgtagataag caaaatttaa
     6421 aagtttatta tgaaaaaaat cgcactacat acaaagagat gaattgggct tttatagaaa
     6481 ttttagtttg aggtcggcat tatggagata gttctgtttt taaagcaaaa tattgattat
     6541 attattatgg gaattttggg ttttatgagt ttttttgcgc tatattttac cattgaaaga
     6601 gctctttttt atagctttgt ggatatagga cattttaaaa gcattaaatc acttgagatg
     6661 gcgcttacta aaaacttaac ttttttatac gtgatatact caaacgctcc ttacgtaggg
     6721 cttttgggaa cagtttgcgg gatcatgata acgttttacg atatgggcgc ttcaggtaat
     6781 ataaatgcaa atactataat gatgggactc tctttagctc tcaaagctac agctcttggt
     6841 attgccgtgg ctataccgac tttggcgata tataatttat taaatagaaa agtagatatt
     6901 ttgctcgcta aatttgagga aacactttga ggcttcctaa aaatgacagt ttaaatatag
     6961 ttccgtttat agatattatg ctggtactac tttgcatagt gcttagtata tcaacgttta
     7021 tagctagtgg acatttaaaa ctaagtttgc caaatgcgaa ttctagcatg aaaaatatga
     7081 aaaaaagtag aaccgttata atcgtagatg atcaaaataa cttatatttt aatgatatat
     7141 tagtagataa agaagcttta agaagcgaaa tatttaaact aggaaatagt gaattgatag
     7201 agataaaaag tgataaagag agtaaatttg agactttcgt gtggatcata gatatattaa
     7261 aagagaaaaa tcatgaaaat ttttccatcg tcacaaaaaa caattagtat aaatttgata
     7321 gcgtttttga tatcgaccgc tttgcatgtt tgcgcttttg cttacgcgct aaatttagat
     7381 attaaattac caaaagagca atcagaacag agttttaaac tgccgttggc taaatttgaa
     7441 actccgatta acagtgtaaa aacagaagaa gcaagagagc cccaacagcc taaaaaagag
     7501 cagaaaaaac agataataga tgaagcgaaa ccaaaaaatg agatagtaaa aaaaccgctt
     7561 ccaaagccaa aaaaagtaga aaaaaagcag atatcaaaag aaaatactaa agcgcccaac
     7621 cagtatatta aaaatcaaac gtacgaaaaa attccgcctg aaattccgtt aaattcaaat
     7681 aacattgata caaatcagac tcaaagtata aaaagcagca gtttgacaaa aagcagctca
     7741 gaaaacagta gtcttaaatc aggcgaaaac agttcaaata tagtctattt aaaaagcaat
     7801 gacgagctat tcataaagat caaaaatgag attatcaaaa acgtaattta tccaaaagtt
     7861 gcaaaaaggc taggatatca aggcgtagta aaagtggagt ttatcttaga taaaaatggc
     7921 ttaaaaagct atggattgaa aagtgaaagt tcttttaatt cgctaaatga ggcggctatt
     7981 caagctttga aaaaagcaag ttcaaatttc ccgaa
//
LOCUS       DAPPKW010000083         7994 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.083, whole genome shotgun sequence.
ACCESSION   DAPPKW010000083 DAPPKW010000000
VERSION     DAPPKW010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7994)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7994)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7994
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.083"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            201..1415
                     /locus_tag="RPW04_001628"
     CDS             201..1415
                     /locus_tag="RPW04_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="saccharopine dehydrogenase family protein"
                     /protein_id="HDX6295714.1"
                     /translation="MSHILIIGAGGVSQAATVKCAMNSEIFTKITLASRTKSKCDKIA
                     KFIKDRLNVTVNTAQIDADDTNAVVNLIKDIKADLLLNVALPYQDLTIMDACAEAGIP
                     YIDTANYEHPDTAKFEYKLQWAKDGDFKKSNTMALLGSGFDPGVTNVYCAYANQYIFD
                     EIHEIDILDCNAGDHGYAFATNFNPEINLREVSAKGRYWENGKWIQTDPMEIMFKWDY
                     PKVGVKDSYLLYHEELESLVKNIPTLKRIRFFMTFGQSYLTHMKCLENVGMLRIDEVE
                     HNGVKIVPIQFLKTLLPDPAGLGERTKGKTNIGCVITGVKDAVEKKIYIYNICDHEEC
                     FKETGVGAVSYTTGVPAMIGSMMVARGIWSGKGVFNMENFDSKPFMDELNKQGLPWEI
                     IEMKPNETRVIK"
     gene            1412..1672
                     /locus_tag="RPW04_001629"
     CDS             1412..1672
                     /locus_tag="RPW04_001629"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295715.1"
                     /translation="MKKIVIFLVFCTAVFAENLKVNFISEDGLKLTINNRDYLALSLP
                     CKGWKIGDELEILSGDKDARCLNAAYLNLRTRTSCELLCDAK"
     gene            1733..1933
                     /gene="rpmE"
                     /locus_tag="RPW04_001630"
     CDS             1733..1933
                     /gene="rpmE"
                     /locus_tag="RPW04_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HDX6295716.1"
                     /translation="MKKDIHPEYVECTVTCACGNTFTSKSNKSEIRVDICSECHPFFT
                     GSEKIVDSAGRVDKFKKKYNMK"
     gene            1938..2753
                     /gene="rsmI"
                     /locus_tag="RPW04_001631"
     CDS             1938..2753
                     /gene="rsmI"
                     /locus_tag="RPW04_001631"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDX6295717.1"
                     /translation="MLYFLPTPIGNLDDISKRCLDVLELCEIIICEDTRVTKSLITLL
                     NAKFGLQISPKEFYSLHTHNEKDFFDKFDKVRLETKICIYASDAGMPCISDPGISLVK
                     FAQQNSIKYEVLSGANALLLAAAASGIIEKEFTFLGFLPNLGKERAIAIQNALNSLYP
                     VIIYESPKRILSLIKSISEFDPLREVFIIKEATKKFEAKFKNSATNLLTQLENSNLNG
                     EWCVVIDRSANKALERITTKDIMELDLPLKQKAKLISKITGENAKKIYQNLIT"
     gene            2790..3470
                     /gene="rlmB"
                     /locus_tag="RPW04_001632"
     CDS             2790..3470
                     /gene="rlmB"
                     /locus_tag="RPW04_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDX6295718.1"
                     /translation="MIIYGKQLFLHLLEKHKEKLINIYLAKDIEKDIFNKIVKSGVKI
                     HKVDNKKAQALARGGNHQGFLAEVCEFEFASLNEIKKQDFLVVLYGLSDVGNIGSIVR
                     TTYALGGGGVIMISKSASMEGIIRASSAAAYELPITLVSDGLSLLNELKQLGFKIYGS
                     DAKGKNPSECKFGKKTVLVMGSEGEGIPRKALEKCDENLGINMREGWDSLNVSVAFGI
                     LFDRIMNG"
     gene            3463..4389
                     /locus_tag="RPW04_001633"
     CDS             3463..4389
                     /locus_tag="RPW04_001633"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295719.1"
                     /translation="MANDILKIKDIGVREVAKQTHIEAEYLEYMCDKNFDKLKKLNVS
                     GFIKILTREYGWDLSDWYDEFKTYCFEHSGDDGCTFCVAPKIPAYTSKPGSNFWTWTL
                     VLLFVIVGLIWIFGYTKYFDDFSFIFDDKNNSVSYSNTTVVETAKESLKIESNMTIPF
                     VSLQDENVTDSNLSDENESLFSSSMTQSSENDQIDSLIPVLNLQQNSAEQNVPKGGLI
                     AKIIPKKTIWIGVKSLDGTYKRSFSTKDPVDINLSLNSLVLTGHGELNLEQNDKNTTF
                     KSKNALRFLVENGSLKQIDYDEYVKLNKGKEW"
     gene            4383..5201
                     /locus_tag="RPW04_001634"
     CDS             4383..5201
                     /locus_tag="RPW04_001634"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295720.1"
                     /translation="MVKSFFAFLLFASICFGYDLNSNLKSIVGDQVYNANRQKIKSLF
                     INEAEFLDTNLNLNYDKITNILRTNSFLNLSYASPVYMDISFVSSSSPTLVLKAISQS
                     LNNLGYNYFLTKSLDTWDSGMVWSISINTQFMLNPGSFYKELLSNNIFIKNIKKTGQF
                     AYSYEIDASRAMLKTLTYESDTEVQLSKPLEPYFLNVSGKSSIEIKSRSNDSWIALVK
                     ILDKNLKLISQVKSDKKEKEIYLNFPDEAFYLIIDDVFSLENIKHGLTIYIKSN"
     gene            5211..6419
                     /locus_tag="RPW04_001635"
     CDS             5211..6419
                     /locus_tag="RPW04_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012001056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HDX6295721.1"
                     /translation="MFDEIRFNTIERLPNYAFAEVNAIKMAARRDGADIIDFSMGNPD
                     GRTPAHIIDKLCESAQKDKTHGYSVSQGIYKLRLAICNWYKRKYGVVLDPETEAVATM
                     GSKEGFVHLTQAIVNPGDVAIVPDPAYPIHTQAFIIAGGNVAKMPLSYNSEFELDENK
                     FFENLQRTIDESIPRPKYIVVNFPHNPTTVTCQKSFYERLVDMAKKERFYIISDIAYA
                     ELTFDGYKTPSIFEVEGAKDVAVECYTLSKSYNMAGWRVGFVCGNKKLVAALKKIKSW
                     FDYGMFTPIQVAATVALDGDQNCVEQIRQTYEKRRDILIDAFCSAGWEIAKPRASMFA
                     WAKLPHQVGSIGSKEFAKQLLTKACVAVSPGAGFGALGDGYVRIAFIENENRIRQAAR
                     NIKKYLKEFE"
     gene            6416..7684
                     /locus_tag="RPW04_001636"
     CDS             6416..7684
                     /locus_tag="RPW04_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002785474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HDX6295722.1"
                     /translation="MRVAILGLGTVGSEVANVLINNRRLITARSGVEITPVIGVVRDI
                     SKKRESSIPLSDDIQSVINRDDIDVFVELMGGVEKPYDVVSKILKKKKPVVTANKALL
                     AYHRSELEILAGDTPFGYEASVAGGIPIIKALREGLSANHIEKIVGIMNGTSNYILTN
                     MMQNGTKFNEALKRAQELGYAEADPTFDIGGFDTAHKLLILASIAYLVHAKPQDILIE
                     GIGDITNEDIYFANEFEYVIKLLAIAKRREDKVELRVHPALIRKDKMIAKVDGVMNAI
                     SVTGDAVGESLFYGAGAGGSATASAVISDLIDIARNVKNPMLGYKAPLEIVPLELMSP
                     KDIRTKYYLRLKVADEIGVLAKITDLMSKNNLSIDSFLQKPRVDKSCDSSTLYFTTHT
                     CLEADMVRVVNLLENESFIKDKPFMIRIEE"
     gene            7686..>7994
                     /locus_tag="RPW04_001637"
     CDS             7686..>7994
                     /locus_tag="RPW04_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HDX6295723.1"
                     /translation="MGLKEYLFGFKGENMAAKYLVSQGFEILEKNFHSKFGEIDIIAK
                     KDDVLHFVEVKSTSKDYETIYRVTQNKIYKIIKTINFYMLKYDFDLNYQIDIICIEQN
                     K"
BASE COUNT         2914 a         1101 c         1602 g         2377 t
ORIGIN      
        1 cgcttttaaa atcaagtaaa ttataatata aattttaaaa attaaattat aatgaagata
       61 gtctaattga taattttttt tgattaaata ttattgctta aatttactta taacttaaat
      121 ttattgtaaa gtaaaaacga tatattaaca ttttatcaaa tttcaagtat aattcataaa
      181 aaatttatca aaggatacag atgagccata ttcttataat cggagccgga ggagttagtc
      241 aagcagcgac cgtaaaatgt gctatgaata gtgaaatttt tacaaaaata actttagcaa
      301 gcaggacaaa gagcaaatgc gataaaatag ctaaatttat aaaagatcgt ttaaatgtga
      361 ccgtaaatac agctcagatc gacgctgatg atacaaatgc agtcgtaaat ttgataaaag
      421 atataaaagc ggatttgttg ttaaatgttg cgcttcctta tcaggatctt actattatgg
      481 atgcttgcgc ggaggccgga attccataca tcgatactgc aaattacgaa catccagata
      541 ccgctaagtt tgagtacaag ttgcaatggg caaaagatgg cgattttaaa aaatcaaata
      601 ctatggctct tcttggcagc ggatttgacc cgggtgtgac aaatgtgtat tgtgcgtatg
      661 caaatcagta tatttttgat gaaatacacg agatcgatat tttagattgc aatgccggag
      721 atcacggata cgcatttgct acaaatttta accctgagat aaatttacgc gaagtaagcg
      781 caaagggcag atactgggag aatggtaaat ggatacaaac cgatcctatg gagataatgt
      841 ttaaatggga ctatccaaaa gtcggcgtaa aagatagtta tctgctttat cacgaagagc
      901 ttgagagttt agtaaaaaat atacctacac tgaaaagaat tcgctttttt atgacgtttg
      961 gacaaagtta tttaactcat atgaaatgtc ttgaaaatgt aggaatgctt cgcatagacg
     1021 aagtagagca taacggcgta aaaattgtac ctatacagtt tttaaagacg cttttaccag
     1081 atcctgctgg acttggagag agaacaaaag gcaaaacaaa tataggctgc gtgataaccg
     1141 gggtaaaaga cgcagtagaa aaaaagatct acatatacaa catatgtgat cacgaagagt
     1201 gtttcaaaga gaccggagta ggtgccgtga gttacactac aggagttcct gcgatgatag
     1261 gaagtatgat ggttgcgcgt ggaatttgga gcggtaaagg tgtgtttaat atggaaaatt
     1321 tcgattcaaa accatttatg gacgaattaa ataagcaagg acttccgtgg gagatcatag
     1381 aaatgaaacc gaatgaaact agagttataa aatgaaaaaa attgttattt ttcttgtttt
     1441 ttgcactgct gtttttgccg agaatttaaa agttaatttt ataagtgagg atgggctaaa
     1501 gcttactata aataacagag actatttggc tttgagctta ccgtgtaaag gctggaaaat
     1561 aggtgatgaa cttgaaattt taagtggcga taaagatgca agatgcttga acgcagcgta
     1621 tctaaattta cgcaccagaa catcttgcga gctgctttgc gatgctaagt aatttggttt
     1681 taagaatatt tagttataat gcgaagtttt ataaaattta aaaggacaag caatgaaaaa
     1741 agatatacat ccagagtatg ttgaatgcac agttacttgc gcttgtggca acacatttac
     1801 aagcaagtca aataagtcag aaatcagagt tgatatttgc agcgagtgtc acccattttt
     1861 cacaggtagt gaaaagatcg tagatagcgc aggacgtgtt gataaattca agaaaaaata
     1921 taatatgaaa taaaccgttg ctctactttc ttccaacccc tatagggaat ttagatgata
     1981 tctcaaagag atgcctggac gtcttagaac tttgtgaaat catcatctgc gaagatacta
     2041 gagtaacaaa atctcttata actcttttga atgcaaaatt tggcttacaa atcagcccaa
     2101 aagagtttta ctcactccat actcacaacg aaaaagattt ttttgataaa tttgataaag
     2161 ttaggcttga aactaaaatt tgcatttatg ctagtgacgc aggaatgcct tgcatcagtg
     2221 atccgggaat ttcgctagtc aaatttgccc agcaaaatag tataaaatac gaagttctaa
     2281 gcggagcaaa cgctctttta ctagcagccg cagctagcgg gatcatagaa aaagaattca
     2341 cttttttagg atttttgccg aatttaggca aagaaagagc tatcgctatc caaaatgcgt
     2401 taaattcgct atatccggtg attatatatg agtctccaaa acgaatttta agccttataa
     2461 aaagcatatc tgaatttgat cctttaaggg aagtttttat tatcaaagaa gcgactaaaa
     2521 aatttgaagc taaatttaaa aatagtgcta caaatttact cactcagctt gaaaactcaa
     2581 atttaaacgg agagtggtgt gttgtgatcg atcgttctgc aaataaagca ttagagcgta
     2641 tcactacaaa agatattatg gagcttgatc tgcctttaaa acaaaaagct aagctaattt
     2701 ctaaaataac cggtgagaat gcaaaaaaaa tataccaaaa tttgataaca taagctaaat
     2761 tttaacggct tttaggtatt atcaggcgta tgattattta tggaaaacaa ctatttttac
     2821 atttgttaga aaagcacaaa gagaagctta taaatatcta tcttgccaaa gatatcgaaa
     2881 aagatatctt taataaaatt gtgaaaagtg gagtcaaaat ccacaaggta gataacaaaa
     2941 aagctcaagc tttagcacgc gggggcaatc atcaaggctt tttagccgaa gtttgtgagt
     3001 tcgagtttgc tagcttaaat gagataaaaa aacaagactt cttagtcgtg ctatatggat
     3061 taagcgacgt aggaaatata ggaagcatag ttcgcacgac ttacgctctt ggcggaggcg
     3121 gtgttataat gatatctaaa agtgcttcca tggaaggtat cataagagct agcagtgcag
     3181 cggcttatga gctgcctata acgctagtta gtgatggact aagtctttta aacgagctaa
     3241 aacagcttgg atttaaaatt tatggctcag atgctaaagg taaaaaccct agtgagtgca
     3301 aatttggtaa aaaaaccgta cttgtgatgg gcagcgaagg cgagggaatt cctagaaaag
     3361 cgcttgaaaa atgcgatgag aatttaggta taaatatgcg cgaaggctgg gatagtttga
     3421 atgttagtgt ggcatttgga atattatttg ataggattat gaatggctaa tgatatatta
     3481 aaaatcaaag atataggcgt aagagaagtt gcaaagcaaa cacacataga agcagaatat
     3541 ctagagtata tgtgtgataa aaattttgat aagttaaaaa agctaaatgt ttctggtttt
     3601 ataaaaattt taacaagaga gtatgggtgg gatctttctg attggtatga tgagtttaag
     3661 acttactgct ttgagcattc aggtgatgat ggctgcactt tttgcgtagc acctaaaatt
     3721 cccgcttata catcaaaacc gggcagcaat ttttggacat ggacgcttgt gctgttattt
     3781 gttattgtcg ggctgatttg gatttttgga tatacgaaat attttgatga tttttcattt
     3841 atatttgacg ataaaaataa tagcgtttca tactcaaata caacggtagt agaaactgca
     3901 aaagagagtt taaagataga aagcaatatg acaattcctt ttgtcagttt gcaagatgaa
     3961 aatgtaactg attcgaattt gtctgatgaa aatgagtctt tatttagctc atctatgaca
     4021 caaagcagtg aaaatgatca gatagatagc ttgatacctg ttttaaattt acagcaaaat
     4081 agtgcagaac aaaacgtacc taagggtggt ttgatcgcta aaattatacc aaaaaagaca
     4141 atctggatag gtgtaaaaag tcttgatgga acatataaaa gatcatttag cacaaaagat
     4201 ccggttgata taaatttaag tttgaattcg cttgtattaa caggtcatgg agaattaaat
     4261 ttagaacaaa acgataaaaa cacaacattt aaatcaaaaa atgcacttag atttttagta
     4321 gaaaatggaa gtttaaagca gatagattat gatgaatacg taaagttaaa taagggaaaa
     4381 gagtggtaaa atcatttttt gcttttttgc tttttgcgtc catatgcttt ggatatgatt
     4441 taaactcaaa tttaaaaagc atagttggag atcaggtata taatgcaaac cggcaaaaaa
     4501 ttaaaagttt atttataaat gaagccgagt ttttagatac aaacctaaat ttgaattacg
     4561 ataagataac aaacatactt aggacaaatt cctttttaaa tttaagctat gcatcgcctg
     4621 tttatatgga tattagtttt gttagctcat cttctcctac tcttgtacta aaagcgatat
     4681 ctcagagttt aaataatctt ggctataact attttttaac caaaagccta gatacttggg
     4741 attctggtat ggtatggagt atatctataa atacgcaatt tatgctaaat cctggaagtt
     4801 tttataaaga gcttttatca aacaatatat ttataaaaaa tataaaaaaa acaggtcaat
     4861 ttgcttattc ttacgaaata gatgctagca gagctatgct aaaaacttta acttatgaga
     4921 gtgataccga agtacagctt tcaaagcctt tggagccgta ttttttaaat gtaagtggta
     4981 aaagcagcat agagataaaa tctagatcaa atgatagctg gatagcatta gtgaaaattt
     5041 tagataaaaa cttaaagctt attagtcaag taaagtcaga taaaaaagaa aaagaaatat
     5101 acttaaattt tcctgatgag gcgttttatc taattattga tgatgttttt agcttagaaa
     5161 atataaagca cggtttaaca atttatataa aatcaaatta aggagttatt atgtttgacg
     5221 agatacgttt taatactatt gagagattac caaactacgc ctttgccgaa gtaaatgcta
     5281 taaaaatggc tgcaagaaga gacggagctg atataataga tttttctatg ggaaatccag
     5341 atggcagaac gccggcacac atcatagata agctttgtga gagcgctcaa aaagataaaa
     5401 ctcatggata tagcgtaagt cagggtatat ataaactccg tttagctatc tgtaattggt
     5461 ataaaagaaa atatggagta gtattagatc cagaaactga agcagtcgct actatgggta
     5521 gcaaagaggg ttttgtgcat ttaactcaag ctatagtaaa tccaggagac gttgcgatcg
     5581 ttccagatcc tgcttatcct atacatactc aagcatttat tatagctggt ggaaatgtcg
     5641 ccaaaatgcc gcttagctat aattccgaat ttgaactaga tgagaataaa ttttttgaaa
     5701 atttacaaag aactatagat gaaagtattc cacgaccaaa atatatagta gtaaatttcc
     5761 cccacaatcc aacaacggtg acttgtcaaa agagttttta tgagcgttta gtagatatgg
     5821 caaagaagga gagattttat ataataagcg atatagctta cgccgaactt acttttgatg
     5881 ggtataaaac tcctagtatt tttgaggttg aaggcgcaaa agacgttgca gtagagtgct
     5941 atacgctatc aaaatcatac aatatggcag gttggagagt cggttttgta tgtggaaata
     6001 aaaaattagt cgccgcactt aaaaagataa aatcatggtt tgattatggt atgtttactc
     6061 ctattcaagt agcagcgact gttgctcttg atggtgatca aaactgcgtt gagcaaattc
     6121 gccaaacata tgagaaaaga agagatatat tgatagatgc gttttgttct gctggatggg
     6181 agatagcaaa gccaagagct agtatgtttg catgggcaaa acttcctcat caagtaggaa
     6241 gcataggaag caaagagttt gcaaagcagc ttctaacaaa agcttgcgta gcagttagtc
     6301 ctggagccgg atttggtgcg cttggtgatg gatatgtaag aattgcattt atagaaaatg
     6361 aaaatcgtat ccgtcaagca gctagaaata taaaaaaata tttaaaagaa tttgaatgag
     6421 agtagcgata cttggattag gtactgttgg cagcgaagtt gccaacgtat taataaataa
     6481 tagacggttg ataacagcta gatcgggtgt tgagataaca cctgttatag gtgttgtacg
     6541 cgatataagt aaaaaaagag agtctagtat acctcttagc gatgatatac aaagtgttat
     6601 aaatagggat gatattgatg tttttgtgga gcttatggga ggcgtggaaa aaccatatga
     6661 tgtagtaagc aaaatcttaa agaaaaaaaa acctgtcgta actgcaaata aagctttatt
     6721 agcttatcat agaagtgagc ttgagatact tgccggagat actccatttg gttatgaagc
     6781 tagcgtagct ggaggtattc ctatcataaa agccttaaga gagggtttaa gcgcaaacca
     6841 tatagaaaaa atcgtaggca ttatgaacgg tactagcaac tatatactta caaatatgat
     6901 gcaaaacggc actaaattta atgaagcgtt aaaaagagct caagaactcg gctacgctga
     6961 agctgatccg acatttgata taggaggatt tgacacggct cataagctcc ttatacttgc
     7021 tagtatagct tatttggtgc atgcaaaacc gcaagatata ctcatagaag gcataggcga
     7081 tatcactaat gaagatatat attttgcgaa tgaatttgaa tatgttatta aattattagc
     7141 tatagcaaaa cgaagagaag ataaagtaga acttcgcgtt catccagctc ttattagaaa
     7201 agataaaatg atagcaaaag tagacggagt gatgaacgcc attagcgtta ctggagatgc
     7261 tgttggagaa agtctgtttt atggagccgg agccggcgga agtgctactg caagtgccgt
     7321 tataagcgat cttatagata tagcaagaaa cgttaaaaat cctatgcttg gttataaagc
     7381 tccgcttgag atagttccgc ttgagcttat gagtccaaaa gatattagaa ctaagtatta
     7441 tttaagatta aaagtagccg atgagatagg tgttttagct aagattacgg atctaatgag
     7501 taaaaataat ctctctatag atagcttttt acaaaaacca agagtcgata agagttgcga
     7561 tagtagcact ttgtatttta ctactcatac atgcttagaa gcagatatgg taagagtggt
     7621 aaatctactt gaaaatgaga gttttataaa agataagcca tttatgatca gaatagaaga
     7681 ataatttggg tctaaaagag tatctttttg gatttaaagg cgagaatatg gcagctaaat
     7741 atttggtatc gcaaggtttt gaaatattag aaaaaaactt tcattctaaa ttcggagaaa
     7801 tcgatataat tgcaaaaaag gatgatgttc tccattttgt agaggtaaaa tctactagta
     7861 aagattacga aactatatat agagttacac aaaataaaat ttataaaata ataaaaacta
     7921 ttaactttta tatgctaaaa tacgattttg atttgaatta ccagatagat attatatgca
     7981 ttgaacaaaa taag
//
LOCUS       DAPPKW010000084         7940 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.084, whole genome shotgun sequence.
ACCESSION   DAPPKW010000084 DAPPKW010000000
VERSION     DAPPKW010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7940)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7940)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7940
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.084"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(120..794)
                     /locus_tag="RPW04_001638"
     CDS             complement(120..794)
                     /locus_tag="RPW04_001638"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295724.1"
                     /translation="MKVLSLASILSFQAPNLLETFKNDDILVISPLDDDINAKFVKCE
                     IGSLSYVLALICKDLFDDEFFDSLDEGYLSGESNVGEEELPSICDFIKNCRVIIVSPE
                     VLNSINSQQIRAMLNLLSSSFGIRIINLNGYDLNLDGVLNEFDELSNFDGAVIFTHSK
                     FNEFRGGEYFKVAAKLRDGDSITVKTIKKDVKTQFRLDKNIKGTVGFLGSDGLDYSYE
                     ILNITK"
     gene            942..1952
                     /locus_tag="RPW04_001639"
     CDS             942..1952
                     /locus_tag="RPW04_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDX6295725.1"
                     /translation="MKYQLTLISIASFVIIATGLAAASAIVVPFFLAVFIAIAISPVL
                     EFMQRLKIRRTISFILLIAIFIGILWFLGNVVSSALNGFSSSLPEYQMQFRIFIDKTV
                     EWLNSYEIIKINSFVLESIDTNKIFSTTSTILRQTSEIVTKSFLVFLLVVFMLVETQV
                     FKDKVEYFAKKHMSMHNIANSFISNLKKYLAIKTISSIATGLILWLFLVYFGVPYAPL
                     WAVLAFIFNYIPTIGSIIAAIPAILMSLLVNDLSDTLWLSIIYLVVNISIGNFIEPKF
                     LGAGLGISTLVVILSLLFWGFLLGIGGMFLAVPLTMSIKIALNESPKTKFIAVLLSDK
                     AQ"
     gene            1953..3281
                     /locus_tag="RPW04_001640"
     CDS             1953..3281
                     /locus_tag="RPW04_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013469038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter"
                     /protein_id="HDX6295726.1"
                     /translation="MNKIFSTILASYILLAFIGAIILSFDIMRLKPISFIDLLFTATS
                     AVCVTGLITANTATDFSGYGQGIILALIQAGGFGYMSLAGFLFLLIGKKVDFKGKMLL
                     KESLDYPNMQGIIKYLKKIFVFTACIEIIGAVILTLNFMLDMPFKKAVWAGVFHSISA
                     FNNAGFSIFEYNLAEYRDNFVLNITICFLVILGGLGFLVLSECFNYYKKSSRISIHTR
                     IVLIATIICILLGMAVLLIFEWENSKSIGSLNWFHKLLSSFFVSVNLRTSGFNTIDLG
                     SLHDQSLFFSSLLMIIGAAPGGTAGGIKITTVAVLLIYAYCSLRDKETVIFQRTIPEN
                     IVKKSFLIFIIAVFYIIISTIILSTTDDKENRYFLPLLFEICSAFGTVGVSTGDGESL
                     SLSAKFSDFGKFYIIVLMFMGRVGVLVFSMALFRKSKNNSIKYPEEGVVL"
     gene            3278..3928
                     /locus_tag="RPW04_001641"
     CDS             3278..3928
                     /locus_tag="RPW04_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HDX6295727.1"
                     /translation="MKTYAVIGLGKFGSHVAKGLIENGEQVIAVDKNEDSIKEFRGIC
                     ENLFIIDTTDINSLKDAGIAEVDTAIVSIGKNIEASILSVMALKEIGVKEVIAKAYTL
                     IHGKILSKIGTDRVIYPERDAAKRLVKSFSLNPKFEVIDVTNTMKIARFKITAQYANI
                     AAGDLLSRSKSDLKIIAFKRENRWEYEIGEFLVLKNDDVVLLFGNSKELEIFVSNI"
     gene            4176..5606
                     /gene="aspA"
                     /locus_tag="RPW04_001642"
     CDS             4176..5606
                     /gene="aspA"
                     /locus_tag="RPW04_001642"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HDX6295728.1"
                     /translation="MSWVSRKEHDFIGELEIAEDVYYGVQTFRAVENFNITHERICNF
                     PNFIVALAQVKKAAALANFDLGLLDAKIKNAICEACDLVASGKYNNQFVVDMIQGGAG
                     TSTNMNANEVIANIALELMGHKKGEYQYCHPNDHVNLSQSTNDAYPTALRVAIYERLC
                     ELTEAMHLLKDSFEKKAEEFKDVLKMGRTQLQDAVPMTLGQEFKTFAIMLGEDIDRVR
                     EARNLVREINLGGTAIGTGINSHPDYPKVVETKLQEVTKRPFITAGNLIEATQDTGAY
                     VQISGVLKRVSTKLSKICNDLRLLSSGPRCGLNEINLPKMQPGSSIMPGKVNPVIPEV
                     VNQVCFAVIGNDVTVTLASEGGQLQLNVFEPVIAYSLFNSIAMLKKACRTLATKCVDG
                     ITANEKVCSDFVYNSIGIVTAFNPYIGYENSASIAKEALSTGKSVASIALERGLLTQD
                     QIDDILRPENMLNPHMTNEDKSKFKN"
     gene            5757..7085
                     /locus_tag="RPW04_001643"
     CDS             5757..7085
                     /locus_tag="RPW04_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000961959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDX6295729.1"
                     /translation="MIILQVIVLFGAIFLGVKLGGMGIGYAGGLGVVVLALVLGMKPG
                     SIPWDVILIIMSVIAAITAMQMAGGLDYLVQIAEKLLRKNPKYINYLAPTVTYFLTIF
                     AGTGHTAFSMIPVIVEVAKGQNIKPAAPLSIAVVASQIAITASPVSAAVVFMSGVLEP
                     LGCSYPMLLAICIPTTFIGCMITSFIVSTFWNLDLDKDPVYQQRLKDGLVKEVKGAEY
                     KEISKSAKTSVAIFLIGVLAVVFYATAISKNVGLIDPVILGRDHAIISFMLTIATLIV
                     IICKVRTDTLVQSSVFKSGMVACVCVLGVAWLGDTFVSGHIEGIKGFASELVGKYPFL
                     LSVALFFASMLLYSQAATAKAIIPAVILALGITPENSGQIYIVVASFAAVSALFVLPT
                     YPTLLGAVQMDDTGTTRIGKYIFNHAFLVPGILAIAISVALGFIVAPMML"
     gene            7429..>7940
                     /locus_tag="RPW04_001644"
     CDS             7429..>7940
                     /locus_tag="RPW04_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
                     /protein_id="HDX6295730.1"
                     /translation="MKSINSKVMAIIAIIMAMLIACFVVVEIFISKVNASFNESEETK
                     NEYVLIYKNIIDGERAGLNIRNLYIIPEDKNTLTILENSVNDLVTNREEYKKLLGTTK
                     LQTDEIFSKLTSFYRSSINKAKNNQNITIEDVQEITPIWREYRDLLEKQLASLVIRDK
                     STSDSFANDV"
BASE COUNT         2710 a         1228 c         1355 g         2647 t
ORIGIN      
        1 tcatcttgat ttagctcttt atctttcata gttttcctta aatttgtgta tataaattta
       61 tgctatatta agccctatat cggctatata gtttttcctt aaaacagatc ttttgaaaat
      121 tattttgtaa tatttaaaat ttcataagaa taatcaagcc catcgcttcc taaaaatcca
      181 accgtacctt tgatattttt atctaatcta aactgagttt ttacatcttt tttaatcgtt
      241 tttacagtta tgctatcgcc atcgcgcaac tttgcggcta ctttaaaata ctctccgcct
      301 ctaaactcat taaatttaga atgagtaaaa atcacggctc catcaaaatt agaaagctca
      361 tcaaattcat ttaaaacgcc gtctaaattc aaatcatagc catttaaatt tataattcta
      421 atgccaaaag aactgcttaa caaatttaac atagctcgta tttgttgaga atttatacta
      481 tttaaaacct ctggcgaaac gatgatgact ctacaatttt ttataaaatc gcaaatacta
      541 ggaagttcct cttccccgac gttactctcg ccgcttaaat aaccctcatc aagagagtca
      601 aaaaactcat cgtcaaacaa atctttgcaa ataagtgcta aaacataact aaggcttcct
      661 atctcgcact taacaaactt agcgtttata tcatcatcta atggactaat aactaaaata
      721 tcatcatttt taaaagtttc tagcaaattt ggtgcttgaa atgatagaat acttgctaaa
      781 ctaagaactt tcatgctatt ccttataata tggcaattta tctaattata tctaaaaatg
      841 tttatgtaat gcttttaaaa tagacaaacg ccgccttaat gtattaatta tttcttaagc
      901 taaatgcagg taggattttt gcatttttaa aggaataaaa tttgaaatac cagctaacat
      961 taatatctat agcaagcttt gtaataatag caacgggtct tgcagcagca agtgccatcg
     1021 tagtgccgtt ttttcttgct gtttttatag ctatagctat ttcgcccgta cttgagttta
     1081 tgcaaagatt aaagatacgc cgaacaatct catttatact gcttatagct atatttatag
     1141 gaattttatg gtttttggga aatgtggtat caagtgcgct aaacggattt agcagctcac
     1201 tgcctgagta tcaaatgcaa tttaggatat ttatagataa aacagtagaa tggctaaact
     1261 cgtatgaaat aataaaaata aatagttttg tgttagaaag catagataca aataagatat
     1321 tttctacaac aagtactatc ttaagacaaa ctagcgaaat agtcacaaag tcgtttttgg
     1381 tctttttgct agtagttttt atgctcgtag aaactcaagt ttttaaagat aaagttgagt
     1441 attttgccaa aaaacatatg tctatgcaca atatagcaaa tagctttatt tcaaatttaa
     1501 aaaaatacct tgctataaaa accatatctt ctatcgctac tggtcttatt ttgtggctgt
     1561 ttttagtata ttttggagta ccttacgcac ctttgtgggc tgttttggcg tttatattta
     1621 actatattcc tactatagga tctattatag cggcgattcc tgctatttta atgtcgcttt
     1681 tagtaaatga tttaagcgat acattgtggc ttagtattat atatttagta gtaaatatat
     1741 ccataggtaa ctttatagag ccgaaatttc taggcgccgg acttgggata tcaactcttg
     1801 tagtaatttt aagtctactt ttttggggat ttttgctcgg tatcggcgga atgtttttgg
     1861 cagttcctct tactatgagc ataaaaatag ccctaaacga aagtcctaaa actaaattta
     1921 tagcggtgct actcagcgat aaggcgcagt aagtgaataa aatatttagc actattttag
     1981 caagctacat actcttagct tttataggag ctataattct aagttttgat atcatgcgtt
     2041 taaaacctat atcatttata gatctacttt ttacggctac ttctgcagtc tgcgtaacag
     2101 gtcttataac tgcaaatacc gcgacagatt ttagcggata cggacaaggg attatactag
     2161 ctttgataca agcaggcggt tttggctata tgagtttagc cggattttta tttttactta
     2221 taggtaaaaa agttgatttc aaaggtaaaa tgctgctaaa agagtcgctt gactacccaa
     2281 atatgcaagg tattataaaa tatctaaaaa agatttttgt ttttactgct tgcatagaaa
     2341 tcataggggc cgtgattctt actttaaatt ttatgcttga tatgccgttc aaaaaagcgg
     2401 tttgggcagg agtatttcac tccatttcag cgtttaataa tgccggattt agtatatttg
     2461 aatacaatct tgcagagtac agagataatt ttgtactaaa tatcacaata tgctttttag
     2521 ttatactagg cggacttgga tttttagtgc ttagcgagtg ttttaactac tataaaaaga
     2581 gttctaggat aagcatacat acaagaatag ttttaatagc aactattatt tgcatattgc
     2641 tcggtatggc tgtattgctg atatttgaat gggaaaattc aaaaagcata ggctctttaa
     2701 actggtttca taagctactt agttcgtttt ttgtatcggt aaatcttaga acatcaggat
     2761 ttaatacgat agatcttggc tctttgcatg atcaaagtct atttttctca tctttgttga
     2821 tgatcatagg agcagctcca ggaggtactg ctggaggtat aaagataact acggttgcag
     2881 tgcttcttat atatgcttac tgctctttaa gagataaaga aactgttata tttcaaagaa
     2941 ctattccgga aaatatcgta aaaaaatcat ttttgatctt cattatagcg gtattttata
     3001 ttattatttc tacgatcata ctaagtacta cagatgataa agaaaataga tattttttgc
     3061 ctttattatt tgaaatttgc tctgcatttg gcactgttgg agtaagcacc ggagatggcg
     3121 aaagcttatc gttatcggct aaatttagtg attttggtaa gttttatata atagtcttga
     3181 tgtttatggg aagagtcggg gtgttggttt ttagcatggc tctttttaga aaaagtaaaa
     3241 ataatagtat taaatatcca gaagaaggag tggtattatg aaaacttacg ctgttatcgg
     3301 ccttggtaaa tttggatcgc acgtggcaaa aggacttata gaaaacggtg agcaagtcat
     3361 agccgtagat aaaaatgaag atagcataaa agaatttaga ggaatttgcg agaatttatt
     3421 tatcatcgac actaccgata taaattcttt aaaagacgca ggtatcgcag aagtagatac
     3481 agccatagta agtataggaa aaaacataga agcttctata ctaagcgtta tggctttaaa
     3541 agaaatagga gtaaaagagg ttatcgcaaa agcatacact ctaattcacg gcaaaattct
     3601 atccaaaata ggcacggata gagttattta tcctgaaagg gacgcagcaa aaaggcttgt
     3661 aaaaagcttc tctttaaatc ctaaatttga agtcatagac gtaacaaata ctatgaaaat
     3721 agctagattt aaaattaccg cgcaatacgc aaatatagcc gccggcgatc ttttaagcag
     3781 atcaaaatca gatctaaaaa taatagcctt taaacgagaa aatagatggg aatatgaaat
     3841 aggcgagttt ttagttttaa aaaatgatga tgtagttttg ctttttggta attcaaaaga
     3901 acttgaaata tttgtctcaa atatatagat aattttgtaa tttaaattat gaatttatgt
     3961 tatatattta agattttatt tataaattta atattaaatt gtttatcaaa agccctattt
     4021 tcgatattta aagtttatga acaacctgct tttaaaacat taaataataa tacataacta
     4081 tgaatctgtc gcgcttttac tatgtttttt aatatttaag attaaattca ttcaatcaac
     4141 attataatgt cattgataaa aaaaatatag gagacatatc atgggtatca agaaaagaac
     4201 acgacttcat aggcgagcta gaaatagcag aagacgttta ttatggagtt caaacattta
     4261 gagctgtaga gaacttcaat attactcacg aacgcatttg caactttcca aattttatag
     4321 tagctcttgc tcaagttaaa aaagcagcag cacttgcaaa cttcgatctt ggtttacttg
     4381 atgcaaagat caaaaatgct atttgtgagg cttgcgacct tgttgctagt ggaaaataca
     4441 acaatcaatt tgtagtagat atgatacaag gcggcgcggg aacaagtaca aatatgaacg
     4501 caaacgaagt tatagctaac atcgcacttg agcttatggg acacaaaaaa ggcgagtatc
     4561 aatactgcca tccaaacgat cacgtaaatt taagtcaaag tacaaacgat gcttatccaa
     4621 cagctttaag agttgctatt tatgaaagac tttgtgaatt aacagaagct atgcatctct
     4681 taaaagacag ctttgaaaaa aaagcagaag agtttaaaga cgttttaaaa atgggcagaa
     4741 ctcaacttca agacgcagtt cctatgactt taggtcaaga gtttaaaact tttgctatca
     4801 tgcttggcga agatatcgac cgtgtaagag aagctagaaa cttagtacgc gagataaacc
     4861 taggcggaac agctatcggt acaggtatca actctcaccc agactatcca aaagtagtcg
     4921 agacaaaact tcaagaagta acaaaacgtc cattcatcac tgctggtaac cttatagaag
     4981 ctactcaaga cacaggcgct tatgttcaaa tttcaggcgt tttaaaaaga gttagtacaa
     5041 aactaagcaa aatttgtaat gacttaagac ttttaagcag cggcccaaga tgcggactaa
     5101 acgagataaa cttaccaaaa atgcaaccgg gctcaagcat tatgccaggc aaagtaaatc
     5161 ctgttatccc tgaagtagta aatcaagttt gtttcgcagt tatcggtaat gacgtaactg
     5221 taactctagc tagcgaaggc ggacaacttc aactaaacgt atttgaacca gttatcgctt
     5281 atagtctgtt taactctatc gcaatgctta aaaaagcttg ccgtactcta gctacaaaat
     5341 gcgttgacgg catcactgca aatgagaaag tttgttctga ttttgtttat aactcaatcg
     5401 gtatcgttac agcatttaac ccatatatcg gttatgaaaa cagtgctagc atagcaaaag
     5461 aagctttaag tacaggaaag agcgtagcat ctatcgcact tgaaagagga cttttaactc
     5521 aagatcaaat agatgatatt ttacgtccgg aaaatatgct aaatcctcat atgacaaatg
     5581 aagataaaag caaatttaaa aactaatttt ttaaatttta aaatagcgat tttacgctaa
     5641 aagtattgaa tttaccttgc ttttgcaagg tagtaatttt ggtatttgtt gctttaggtg
     5701 actttaaaca gtcgtcataa agcataaaaa ataaaaagga tctttttatg gacattatga
     5761 ttattctaca agttatcgtt ctatttggag cgatattctt gggtgttaag ctcggaggta
     5821 tgggtatagg ctacgccgga ggtcttggcg ttgttgtttt agcccttgtt ttaggtatga
     5881 agccaggtag tattccatgg gatgttatac ttataattat gtcggttatc gcggctatca
     5941 cagcgatgca aatggcaggt ggacttgatt atttagttca aatagctgag aaattattaa
     6001 gaaaaaatcc aaaatatatc aactatttag ctcctacagt tacttacttt ttaactatat
     6061 ttgccggtac gggtcacact gcattttcta tgataccagt tattgttgaa gttgcaaaag
     6121 gtcaaaatat aaaacctgca gcacctctta gtatagcagt tgttgcaagc caaatcgcta
     6181 tcacagcaag tccggtttcg gctgcggttg tatttatgag cggcgtactt gaaccacttg
     6241 gctgctcata tcctatgctt ttagctattt gtattcctac aacattcatc ggttgtatga
     6301 ttacttcgtt tatcgttagt acattttgga atcttgacct tgacaaagat cccgtatatc
     6361 aacaaagatt aaaagacggt cttgtcaaag aagtaaaagg tgctgagtat aaagagatat
     6421 caaaatctgc caaaacttca gttgctatat ttttaatcgg cgttttagca gtagttttct
     6481 atgcaactgc tatatcaaaa aacgtaggat taatcgaccc tgttatactt ggtagagatc
     6541 acgctatcat cagctttatg cttactatag ctacgcttat tgttataatt tgcaaagtta
     6601 gaacagatac tttagttcaa tcaagcgtat ttaaatcagg tatggtagct tgcgtgtgcg
     6661 tacttggtgt ggcttggctt ggcgatactt ttgttagtgg acacattgaa ggaattaaag
     6721 gatttgcttc tgagctagtc ggtaaatatc cgttcttgct ttcagttgca ctattttttg
     6781 cttcaatgtt actttattct caagcagcaa ccgcaaaagc gatcatccct gcagttattt
     6841 tagctctagg aattactcct gaaaacagcg gtcaaattta tatcgttgta gcttcatttg
     6901 cagcagtttc agctctattt gtcctcccta cttatccaac attgttaggt gctgttcaaa
     6961 tggacgatac aggtacaaca agaataggaa aatatatatt caaccacgct ttcttagttc
     7021 ctggaatttt agccatagct atatcagtag ctcttggatt tatcgttgct cctatgatgc
     7081 tttaattttc ttagtccgac aacaagtcgg actatctaaa tatattaaat ttatccacca
     7141 tttttctaaa tttaaaaata ataaaatatt acgattttat atatactacg ttataaatta
     7201 ttcataatta ttaaaatata tccaaaaaat aaattggtaa taaatttaat acaagatatt
     7261 ttaaatttat taccagatgc taactatata gcgaattttt taatatttaa gcgatattta
     7321 taaatatttt gttataatca ttattaataa ttttatatag aattatatta tatgtataat
     7381 tatttttaaa tataaagatt aaaaaaatta ataaaaaaag gatgtatgtt gaaatctata
     7441 aatagtaagg ttatggcgat tatcgccatt ataatggcaa tgctaatcgc atgttttgtc
     7501 gtagttgaaa tttttatttc taaagtaaat gcatcgttta acgagtcaga agagaccaag
     7561 aacgaatatg ttttaatata taaaaatatt atcgatggtg aaagagcggg acttaatata
     7621 aggaatttat atattattcc tgaagataaa aataccttga caatactaga aaatagcgtt
     7681 aatgatctag ttacaaacag agaagaatat aaaaaattat taggtactac taagctgcaa
     7741 acagatgaaa tttttagcaa attaacgtcg ttttatagaa gttctataaa taaagcaaaa
     7801 aataaccaaa acattaccat agaagacgtc caagaaataa cgcctatatg gagagaatat
     7861 agagatctgc tagaaaaaca gctagctagt ttggtgatta gagataaaag tacatcagat
     7921 agttttgcta atgatgttaa
//
LOCUS       DAPPKW010000085         7834 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.085, whole genome shotgun sequence.
ACCESSION   DAPPKW010000085 DAPPKW010000000
VERSION     DAPPKW010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7834)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7834)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7834
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.085"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..1500
                     /locus_tag="RPW04_001645"
     CDS             <1..1500
                     /locus_tag="RPW04_001645"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012376.1,HMM:NF014871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HDX6295731.1"
                     /translation="STVIFAAFLLIFNGCANLNLNNKHENELLILHTNDHHGALLPYE
                     TKDGTLIGGVALQANLVKQMRNEYKNALLLNAGDVNTGSSLSNIFDAKPDILAFNVLK
                     YDAATLGNHEFDGTYEKLKMQMELSNFPWLSANVKFENNYIAKPYIIKDFNGFKVAIM
                     GLTTSTTKYITIPAKFDGANGEKIEFLPEIHAAKETLDEIKNTNPDFVIALVHLGDIK
                     GDPVHITSVDLANNTHGIDLIIDGHSHSVFQKPLVINGVPIVSAGSNNRYVGKAVLNL
                     KDKKIKWNLVELTSKDFDLDDEMNGILEPFIRIHDEALNSKIITLKEPLLFENNEIRF
                     KQLPIGRHVTDSMINLLFKFGIKADFGIINSGAIRSGINAGDVSKKDILISMPFPNTI
                     SAVSLKGDEVMELFNYIINIKPGFGGFAQISKDVSFTIDSSNKTILNLKIKNEPINPS
                     KIYTIAVTDFLANGGDGYAILKKGINKFDSSVTLNEAFIEYLKLLEGKI"
     gene            1650..3281
                     /locus_tag="RPW04_001646"
     CDS             1650..3281
                     /locus_tag="RPW04_001646"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HDX6295732.1"
                     /translation="MNQTKYIFVTGGVLSSLGKGIAAASIATLLKNVGLKVSILKADP
                     YINVDPGTMSPLEHGEVFVTDDGAETDLDLGHYERFLDENLTQNNNFTTGRVYSSVIE
                     KERRGDYLGKTIQVIPHIVGEIVERIKKAGVGKDILIVEIGGTVGDIEGLPFLEAIRA
                     LRSEVGRKNGMFIHLTLVPYIKVAGELKTKPTQHSVGELRRIGISPDMIICRSEIPIN
                     RELKDKIASSCGVERNSVIESPDLQSIYQVPLSFLKQDILEPIADVLDLGELRPNMQN
                     WDNLVKRVIAPSDSVTIAFVGKYIDLKESYKSLTESIIHAGANLDARVHLKWCDSEKI
                     DENSASETLKDVDGILVAGGFGSRGIEGKMQAIKYARENKIPYLGICLGMQLSLIEFA
                     RNILNLEDANSVEFQENCKNPIIYLIDSFIDANGKKQLRTHKSPLGGTMRLGSYKCNI
                     LPNSLLSRIYNGAKQIKERHRHRYEANPKYREAFEKNGLIVSGESEGLIEAVELQDHP
                     FFLGVQFHPEFTSRLTKPNPAILGFIKAGIDNKKC"
     gene            3275..4867
                     /gene="recJ"
                     /locus_tag="RPW04_001647"
     CDS             3275..4867
                     /gene="recJ"
                     /locus_tag="RPW04_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDX6295733.1"
                     /translation="MLDKTEIRNLLNKRFSNDLHKKLSEIPLPCELKDTYKAAERIKT
                     AIQNNELIAIVGDYDVDGVVSTAIMAEFLTDMSTDFIIRIPNRFKDGYGLNSDIVNEL
                     ESVALIITVDNGISANEAADLCAKKGIDLIITDHHMPPQILPQAYAIINPKQPECTFP
                     NIEICGAQVAWYLVGALKEVCSLKNYDMGKFIDLLALAIIADMMELRDLNRILVRLGI
                     TRINSSKRACFEAIKCFYGKDKFEFDDISFLIAPLINSAGRMDDASVSFKFLRSKTID
                     EANSYLDMITCFNNSRKEQEKALFESSIKDVNDNEDIIVTWGNEWHEGVIGIVASRLA
                     KRYKKPAIVFSIDGCRAKGSARSVGKFDILALIASQEKLLCGFGGHKGAAGLVIETNN
                     LDEFKHAVNNSCFLQDLYDFSGSDEVLGEIDHNAIDYELLEILEYFEPYGQRNPRPLF
                     ELKSAKVKNTKFIGKEENHLKLILQKGGKSYEAIFFNYDYTPHVGDNIDLLVSVSKNS
                     FRGLITPQLLIKEIYELKNQEK"
     gene            4868..6052
                     /gene="nhaA"
                     /locus_tag="RPW04_001648"
     CDS             4868..6052
                     /gene="nhaA"
                     /locus_tag="RPW04_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDX6295734.1"
                     /translation="MKINLNFVKHESFGGVLLIIATILALLFQNGFLNHFYTEILRAE
                     FTVGFRDFNLSKPLILWVNDGLMAIFFFVVGLELKREILQGELSKPSQIALPTIGALG
                     GVILPAVIFWAFNHGNDFAIRGWAIPTATDIAFALGVLMLLGKRIPSSLKIFLLTLAI
                     IDDLCAIVIIAIFYTTKLSFISFVIAGICLFALWVLNKFKVSKKSAYILVTLILWVSV
                     LKSGVHATIAGVVAAFFIPMRDDSGKSLLVELEHDLQGITSYFILPVFAFVNAGVSLA
                     GVQINQLLNSVGMGIFFGLLIGKQVGVFLFSYIFIKLGFAKLPEGSSWTQFYGVCILT
                     GIGFTMSLFVNSLAYHDSNEFFHADKLGILLASFTAGVIGYIYLLVFSKVAKNHRKDN
                     ES"
     gene            complement(6182..7339)
                     /locus_tag="RPW04_001649"
     CDS             complement(6182..7339)
                     /locus_tag="RPW04_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002953805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDX6295735.1"
                     /translation="MKNLPKNRNIYIQKGRFYIDHQKDGERIRRSTGLKKSALAFDFI
                     RKNYDRFLGSKAELEQARRDYYELENTHVDRQLRKKEQDLKPIKNDSEFSFDSVIDKL
                     LKEKSFLKSKTIRLYEVMSSAVSDFLEYKGIYYLPDFQRYHSVEFVQFCKDKGLKDSS
                     ISGYCSFLKMLFRYALSNDLISKNPFCMPRFKQQYDIDEDEKFTPFSLEEILELIKNA
                     DDEELRLFLIVAFFTGARTGEILALTFGDLDFENRQIRINKTLSDAGIVDSPKTKTSN
                     RKIDMLDIVYKELIKLDISDKNARIFKRSRSMIRIKFNDLQEKLGYNIHRLYDTRHSF
                     ASVMLSRGEEPMWVGCKMMGHKDLNETYRSYAKYLPKEVKQRAVFLNDIVI"
BASE COUNT         2832 a         1181 c         1368 g         2453 t
ORIGIN      
        1 tcaacagtga tttttgctgc atttttattg atatttaacg gttgtgcaaa tttaaattta
       61 aataacaaac acgaaaacga gctgttaatt cttcacacaa atgatcacca cggcgctctt
      121 ttgccatatg aaactaaaga cggtacgcta attggcggtg tagctttaca agctaactta
      181 gtaaagcaga tgagaaacga atataaaaat gcgcttttac ttaacgcagg agatgtaaat
      241 accggctcat cgctttcaaa tatatttgat gcaaaaccgg atattttagc ttttaatgtt
      301 ctaaaatacg acgccgctac tcttggaaat cacgaatttg acggtacata tgaaaaatta
      361 aaaatgcaaa tggagctttc gaatttccct tggcttagcg caaatgttaa atttgaaaat
      421 aattatatcg caaaaccata tattatcaaa gattttaatg gatttaaagt cgccataatg
      481 gggcttacta cgagtacgac aaagtatata actattccgg caaaatttga tggcgcaaat
      541 ggagaaaaga tcgaatttct accagaaatc catgccgcaa aagaaacatt ggatgaaata
      601 aaaaatacaa accccgattt tgtaatcgct ttagtacatc ttggagatat taaaggtgat
      661 cccgtgcata taacgtcggt tgatctagct aataatacac atggtataga tcttataata
      721 gacgggcatt cgcactcggt atttcaaaaa cctttggtaa taaatggcgt acccatagtg
      781 agcgcaggaa gcaataaccg ctatgtagga aaagctgttt taaatttaaa agataaaaag
      841 ataaagtgga atttagttga gctaactagc aaagattttg atttagacga tgaaatgaac
      901 ggaattttag agccgtttat acggattcac gacgaggctt taaatagtaa aatcataacg
      961 ttaaaagagc cgttactgtt tgaaaataac gagatcagat tcaagcagct gcccatagga
     1021 aggcacgtaa ccgactctat gataaatttg ctttttaaat ttggtataaa agcggacttt
     1081 ggtatcataa actcaggagc tataagatct ggtataaatg ccggagacgt aagtaaaaaa
     1141 gatattttga tctctatgcc ttttccaaat acgatatctg cagtaagcct aaaaggtgat
     1201 gaagtgatgg aattatttaa ttatataatc aatataaaac cgggattcgg aggatttgct
     1261 caaatatcaa aagacgttag ttttactata gatagttcaa ataaaactat tttaaattta
     1321 aaaattaaaa atgagcctat aaatccatct aaaatttata ctatagcggt tactgatttt
     1381 ttagctaacg gaggagacgg ttatgctatt ttaaaaaaag ggataaataa atttgactca
     1441 tcggtgactt taaatgaagc gtttatagag tatttaaaac ttcttgaagg taaaatttaa
     1501 attatatagt cgccataaat ttataaaaat aaattttaaa ttcgatgtta tataatttgc
     1561 taacgcgcta aagcaataaa actaaattta tcagatagta aaaaaacttt tgatataatc
     1621 gctttagaaa aggaatgata atgagcaaat tgaatcaaac aaaatacatt tttgtaacag
     1681 gcggagtgct ctctagtctt ggaaaaggca tagcagctgc tagtatcgcc actttgctta
     1741 aaaatgtagg attaaaagta agtattttaa aagcagatcc gtatataaat gtagatccag
     1801 gcaccatgag tccgcttgag cacggtgaag ttttcgtaac cgacgatggt gctgaaactg
     1861 accttgatct tggacattat gaaagatttt tagatgaaaa tttaacgcaa aataacaact
     1921 tcactacagg tagagtttat agctcggtaa tagaaaaaga gagacgcggc gactatcttg
     1981 gtaaaacaat tcaagttata cctcatatcg taggcgaaat agtagaacga atcaaaaaag
     2041 ccggagttgg caaagatata ttgatagtag aaatcggcgg caccgtaggt gatatagagg
     2101 ggcttccttt cttagaagcg ataagagcct taagaagcga agtaggacga aaaaacggta
     2161 tgtttattca tttaacttta gtaccgtata taaaagttgc cggtgaatta aaaactaaac
     2221 cgactcagca tagcgtcgga gaattgcgcc gcataggaat aagtccagat atgataatat
     2281 gccgctcaga aattcctata aatcgcgaat taaaagataa gatagcttct agctgtggcg
     2341 ttgagagaaa ctcagttata gaaagcccag atttacaaag catatatcaa gttccgctta
     2401 gttttttaaa acaagatata cttgagccta tagctgacgt gttagatctt ggtgagctaa
     2461 gaccaaatat gcaaaattgg gataatctgg taaaaagagt tatagctccg agcgatagcg
     2521 taacaattgc atttgtagga aaatatattg atttaaaaga gagttataaa agtttaacag
     2581 aaagcatcat tcacgctgga gcaaatctcg atgcaagagt acatttaaaa tggtgcgata
     2641 gtgaaaaaat agatgaaaat agcgcatctg aaacattaaa agacgtagat ggaatacttg
     2701 tagcaggagg ttttggttca cgcggtatag aaggcaaaat gcaagccata aaatacgcta
     2761 gagaaaataa aataccatat cttggaattt gccttggtat gcagcttagt ttgatcgaat
     2821 ttgctagaaa tattttaaat ttagaagatg cgaattcggt tgaatttcaa gaaaactgca
     2881 aaaatcctat aatatatctt atagattcat ttatagatgc aaacggtaaa aaacagttac
     2941 gtacccacaa aagtccgctt ggaggcacta tgagacttgg aagctataaa tgcaatatac
     3001 ttccaaactc tcttttaagt agaatttata atggagcaaa acagataaaa gagcgacacc
     3061 gacacaggta cgaagcaaat ccaaaataca gagaagcatt tgaaaaaaat ggtcttatag
     3121 ttagtggaga gagcgaaggt cttatagaag cagtcgaact acaagatcat ccgttttttc
     3181 taggtgtgca gtttcaccct gaatttactt cacgtctaac aaaaccgaat cctgctattt
     3241 taggctttat aaaagccggt atagacaata aaaaatgtta gataaaaccg agatcaggaa
     3301 tctgcttaat aaaaggttta gtaacgactt acataaaaaa ctttcagaga ttcctttgcc
     3361 ttgcgaactc aaagatactt ataaagctgc agagcgtatc aaaactgcga tacaaaacaa
     3421 tgagcttata gctatagttg gagattatga tgtagatgga gttgttagta ctgctataat
     3481 ggctgagttt ttaacagata tgagtacgga ttttataata cgaattccaa atagattcaa
     3541 agacggttac ggtcttaact cagatatagt taatgaactt gaaagcgttg cactcataat
     3601 aacagtagat aacggtataa gtgcaaatga agcagctgat ctatgcgcca aaaaaggtat
     3661 agatcttatc atcacagatc atcatatgcc tccgcaaatt ttgcctcaag cctacgcgat
     3721 aataaatcca aaacagccag aatgcacatt tccaaatatt gaaatttgcg gtgctcaagt
     3781 agcatggtat cttgttggag cgttaaaaga ggtttgcagt ctaaaaaatt acgatatggg
     3841 caaattcatt gatcttttag cgctagcaat tatcgctgat atgatggagt tgagagattt
     3901 aaataggata ctagttagac ttggtataac tcgaattaac tctagtaaaa gagcatgttt
     3961 tgaagctata aaatgttttt acggaaaaga taaatttgaa tttgacgata taagctttct
     4021 tatagctcca cttataaact cggccggaag aatggatgat gcaagcgtgt cttttaaatt
     4081 tttaagaagt aaaactatag atgaagcaaa cagttatctt gatatgataa cctgttttaa
     4141 taattcaaga aaagagcaag aaaaagcatt attcgaatcg tctataaaag atgtaaacga
     4201 taacgaagat atcatagtta cttggggaaa tgagtggcac gagggcgtaa taggaatagt
     4261 tgctagcaga cttgcaaaaa gatataaaaa gcccgcaatt gtatttagca ttgatggctg
     4321 cagagcaaaa ggaagtgcta gaagcgtagg taaatttgat atattggccc ttatagcatc
     4381 acaagaaaaa cttctttgcg gatttggcgg acataaaggc gcggctggat tagttataga
     4441 aactaacaat ctagacgagt ttaaacatgc cgtaaataac tcctgctttt tacaagattt
     4501 atatgatttt agtggaagcg acgaggtttt aggcgaaatt gatcacaatg cgattgatta
     4561 tgagcttttg gagattttag agtattttga accatacggt caaagaaatc caagaccgtt
     4621 atttgagcta aaaagtgcaa aagtaaaaaa taccaaattt ataggcaaag aagaaaatca
     4681 tctaaaactc atacttcaaa aaggcggcaa atcgtatgaa gcaatatttt ttaactacga
     4741 ctatacgcct catgtcggag ataatataga tcttttagtc tccgtatcaa aaaactcatt
     4801 tagaggtctt atcacgcctc aacttttaat aaaagagata tatgaactaa agaatcagga
     4861 gaaataaatg aaaataaatt taaactttgt aaaacacgaa tcattcggcg gtgttttact
     4921 tatcatcgct actattttag cacttttatt tcaaaatggg tttttaaacc atttttatac
     4981 cgaaatttta agagctgaat ttacggtcgg ttttagggat tttaatctat caaaaccact
     5041 gattttatgg gtaaatgatg gattgatggc gatatttttc tttgttgtgg gacttgaatt
     5101 aaaaagagaa atattgcaag gcgaactttc aaaaccatct caaatagctc tacctacgat
     5161 aggcgcactt ggcggagtga tactaccggc cgttatattt tgggcattta atcacggaaa
     5221 tgattttgct attagaggct gggctatacc tactgcgacc gatatagctt ttgcgctagg
     5281 agttttgatg cttcttggta aaagaatacc atcaagtctt aaaatatttt tacttacttt
     5341 agccatcata gatgacctat gcgctattgt tataatagct atattttata cgactaaact
     5401 atcttttatc tcttttgtta tagccgggat ctgtttgttt gcgctttggg tattaaacaa
     5461 atttaaagta tcaaaaaaat cagcatatat attagttact ttgatacttt gggtaagcgt
     5521 actaaaaagc ggagtccacg ctaccattgc aggagtcgtg gcagcatttt ttatacctat
     5581 gagagacgat agtggaaaaa gtctgctagt agagcttgaa catgatcttc aaggaataac
     5641 cagctatttc atacttccag tttttgcttt tgtaaatgcg ggcgtaagtc ttgccggagt
     5701 acagataaat caacttttaa attcagtagg aatgggaata ttctttggat tacttatagg
     5761 caaacaagta ggagtttttc tgtttagcta tatttttata aagctaggct ttgctaaact
     5821 tcctgaaggt tcgtcttgga cgcaatttta tggagtgtgt atactaactg gtataggatt
     5881 tactatgagt ttgtttgtaa attcattagc atatcatgat agcaacgagt tcttccacgc
     5941 agataaacta ggtattttat tagcttcatt taccgcagga gttataggat atatatatct
     6001 gcttgtattt tcaaaagtag caaaaaacca tcgcaaagac aatgaatctt aaaaataatt
     6061 aagcttaaat tatataaaat aaggctttaa aagcattaaa agaagcgaaa attattctat
     6121 ttttattaaa ttttatcgtt attatagcat actttttaaa aaatatgtct aaaaataaat
     6181 tttaaatgac aatatcattt aaaaaaacag ccctttgctt gacttctttt ggcagatatt
     6241 ttgcgtacga gcggtaagtt tcatttaaat ccttatgtcc catcatttta caaccgaccc
     6301 acataggctc ttccccacgg cttaacatta cagaagcaaa agagtgccta gtatcataaa
     6361 gtctgtgtat attatagccg agtttttctt gcaaatcatt aaatttaatc cttatcattg
     6421 aacgagaacg cttaaaaatt cgtgcgtttt tatcgctaat atctaacttt ataagctctt
     6481 tatagacaat atcaagcata tcaattttgc gattgcttgt tttggttttt ggtgaatcta
     6541 caatacctgc gtcagaaagt gttttattaa tgcgaatttg tctattttca aaatccaaat
     6601 cgccaaatgt aagagctaaa atctcaccag tcctagcacc agtaaagaaa gcaacgatca
     6661 aaaataagcg aagctcttca tcatctgcat tttttataag ttctagaatc tcttcaaggc
     6721 taaaaggcgt aaatttttca tcctcgtcaa tgtcgtattg ctgcttaaat cttggcatac
     6781 aaaacggatt ttttgaaatt aaatcattac ttaatgcata gcgaaatagc atttttaaaa
     6841 aggagcaata gccactaata gaactatctt ttaagccctt atccttgcaa aactgcacaa
     6901 actcaacact atgatacctt tgaaaatcag gcagataata aataccttta tattctaaaa
     6961 aatcacttac agcactgctc ataacttcat aaagcctaat agttttactt tttaaaaacg
     7021 acttttcttt aagcaattta tcaattacgc tatcaaaact aaattcgcta tcgtttttta
     7081 tgggctttaa gtcttgttcc ttttttctta actgacgatc aacatgggta ttctcaagct
     7141 cataataatc acgcctagct tgttcaagtt cagccttaga gccaagaaat ctatcataat
     7201 ttttacgtat aaaatcaaat gcaagagctg actttttaag accagtagaa cgacgaatcc
     7261 tctcaccatc tttttgatga tcgatataaa atctgccttt ttgaatataa atatttctat
     7321 ttttaggtaa atttttcatg gttatatttt agcaaaaaaa tctcaataag taaatttggt
     7381 acatgcaaat attaaatcgt ttaatacaaa taaatatttt attattactt taaattaata
     7441 atttatttta agttttaaaa ataaaataaa aattatcctt tgaagcttaa acaccgatat
     7501 ttacgatatt ttaaaattaa aatatgctta attaagctat attttaaagc ttaattttac
     7561 aaaatctcgc ttatttttaa aattttattt taagtttaaa tagttataaa gtttataaaa
     7621 atacgaatta actaatattt tatcgattaa gcaaaaacta tataaaaagt ttaagatttt
     7681 acaaaatctc gttgctcctt actataatat aaaaatacat aaaataaaaa agggaaagaa
     7741 aacttttaat tagagttttt atttttaaat ttttaaattt tagattttaa attaaaaata
     7801 aaaaaagaaa tttttaaatt ttaaaagttt ttgt
//
LOCUS       DAPPKW010000086         7812 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.086, whole genome shotgun sequence.
ACCESSION   DAPPKW010000086 DAPPKW010000000
VERSION     DAPPKW010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7812
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.086"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..749)
                     /locus_tag="RPW04_001650"
     CDS             complement(<1..749)
                     /locus_tag="RPW04_001650"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HDX6295736.1"
                     /translation="MDFLNAVILGIVEGLTEFLPVSSTGHMILSAKLLGLEQTSVLKC
                     FEVVIQLGSILAVVFMFFDRLKEDFNLWIKLAIGFVPTAIIGFLAYKHIKTFFEPSTV
                     AYMLIIGGIVFIVVELWHKKINYEGDTKTLHEVSFKQAFIIGLSQCFAMIPGTSRSGS
                     TIITGLLCGLSREVAARFSFLLAIPTMFAATAYDSYKNADIFVQNKEALWIFLVGGFM
                     AFIVALIVIKLFLKFVSKFSYISFGIYRIILG"
     gene            complement(750..1358)
                     /locus_tag="RPW04_001651"
     CDS             complement(750..1358)
                     /locus_tag="RPW04_001651"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDX6295737.1"
                     /translation="MCQLYVLTDKELTPQNSISQQILELLNSGIKLIQYRNKTQDHDI
                     KLLKSIANLCDDFNAKFIINDDPFLAKACGAHGVHIGKDDEDIKKAKELLGKNSIIGV
                     SCYNDISLALKAQKDGASYVAFGAMYPSQTKPNAPLCDHNTIKKAKENLNVPICVIGG
                     INALNLKEVSALMPDLIAIVSAAYSPKSISENITNLNNIIRN"
     gene            complement(1396..2121)
                     /locus_tag="RPW04_001652"
     CDS             complement(1396..2121)
                     /locus_tag="RPW04_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDX6295738.1"
                     /translation="MNRIFKFIFALLLMLNLANAKTLIFGSDAEYPPFGYMDENNKIA
                     GFDIDLVDAISKKAGFEYKFIKVGFDALIPALKVGKIDAIAASMSATTERKKSVDFSS
                     PYFYTKNLYLKMATDKEIASKDDLKKKRIGAMLGTVQESVAHGIKGAKVIATEGIAGS
                     IMNLKAGKVDAVIVDSSVGYGYLKKNADIVKWLEENDGSDGFAMAFDKDKHSEFLAKF
                     NKALEDIKSDGTYEKLLEKYDLK"
     gene            complement(2149..2877)
                     /locus_tag="RPW04_001653"
     CDS             complement(2149..2877)
                     /locus_tag="RPW04_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HDX6295739.1"
                     /translation="MKCFFKFIVVACIAAGFSHAADVIRVGTNATYPPFEFIDEQNKI
                     AGFDMDLIDALSKKVGFEYKIVNMSFDALIPALKAGKIDAVAAAMSATPDRIKAVSFT
                     KPYYNTENLFIKQAKNGDLTSKQNLDGKKIAVQLGTVQEIAARAMKGVKVMANEDIFA
                     AIMALKNGKVDAVLVDSSIGYGYLNKNKDLAEFLKEPDGSEGFSIAFDKNKHTDLVAK
                     INQAVEELKSDGTYDKLLAKYDLK"
     gene            complement(2893..3621)
                     /locus_tag="RPW04_001654"
     CDS             complement(2893..3621)
                     /locus_tag="RPW04_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDX6295740.1"
                     /translation="MIKIENLVKNYGNLKVLNSISTEIKKGEVVAIIGPSGGGKSTFL
                     RCINRLEEPTSGHIFINGIDILDPKININKIRQKVSMVFQHFNLFANKTVMQNLTLAP
                     LQTGLYDLKTANDKANELLKKVGLANKANAYPHKLSGGQKQRIAIARSLAMEPDIILF
                     DEPTSALDPEMIGEVLSIMKDVAKDGLTMLVVTHEMGFAKNVANRIFFMDKGIIAVDD
                     TPKNVFENCTNPRLNEFLNKILNH"
     gene            complement(3614..4333)
                     /locus_tag="RPW04_001655"
     CDS             complement(3614..4333)
                     /locus_tag="RPW04_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDX6295741.1"
                     /translation="MTNLYNEKFLKFIFSIAIIIIGIYYTYPVSITDAQKGAYVDSYF
                     TTLGLTFGGIFIGIVLGFILAFLKFLNIKILSFIIDEYIDIVRGTPVLLQLMIFAFVI
                     LATLSDNFYAAVIALGLNSSAYVAEIVRSGINSVDKGQMEAARAMGLSYSVSMRQIIF
                     PQAVKNILPALANEFISLFKETSVVGLIGIFDLTMQSKSLQATLFSPEPILFAGVIYY
                     ANVKFFSLLAKLLENRLNKND"
     gene            4442..5957
                     /gene="putP"
                     /locus_tag="RPW04_001656"
                     /pseudo
     CDS             4442..5957
                     /gene="putP"
                     /locus_tag="RPW04_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732130.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
     gene            6118..6194
                     /locus_tag="RPW04_001657"
     tRNA            6118..6194
                     /locus_tag="RPW04_001657"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6152..6154,aa:Ile,seq:cat)
     gene            6389..7642
                     /locus_tag="RPW04_001658"
     CDS             6389..7642
                     /locus_tag="RPW04_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002871902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDX6295742.1"
                     /translation="MPKISTANLYDKDIRGLLPTNKIYKKAVGNPKELYIKVYPSGLK
                     IFVIQYKNINHFKLKEFREGIYSVAEARKDAVELIRKFENGFVRSKDKYQLTALFEKY
                     IDKKEKIDQLDKTYLDKVKSRMKTYILPKFGNIDIKDIKFNDLKNILMPLFNPHNPKK
                     SRLETIHRIINTLNSLYENAIKDRYIDYNPCKALHDEFPTSNNFSLRNGIDTRYPAIT
                     SETDLKEFLTDLRDDSRMDLQTKRALMLQILCVNRPANTANMKWEHINLKTEIWSIPP
                     LEMKMRHAHQIALSKQALSILLEQRQYTPIQSDFVFPAVTKTGHISRDSISKAIRNLG
                     SKDKYHSRACAHGFRATFKTICSLHFTELARLGISEKTIENALAHTEPNAVKYAYERR
                     TATLEQNRILMQWYADYLNSIVKFI"
BASE COUNT         2408 a         1336 c         1397 g         2671 t
ORIGIN      
        1 ccaagtatta tcctatatat tccaaagctg atatagctaa atttagatac gaattttaaa
       61 aacagcttga taactatcaa agctactata aatgccataa atccgccgac taagaatatc
      121 cataaagctt ctttgttttg cacgaaaata tctgcgtttt tatagctatc ataagcagtt
      181 gcggcaaaca tagtagggat ggctagtaaa aagctaaatc tagccgcaac ttcacgacta
      241 agtccgcaaa gtagaccggt tatgatggta gagccacttc ttgaagtgcc gggtatcatg
      301 gcaaagcatt gagaaagtcc tattataaaa gcttgtttga aactcacttc gtgtaaggtt
      361 ttcgtatcgc cctcatagtt tatcttttta tgccaaagct caactactat aaaaacgata
      421 ccgccgatga tgagcatata agcaacggtg cttggctcaa aaaatgtttt tatgtgtttg
      481 taagccaaaa agccgatgat agctgtgggc acaaagccta tagcaagctt tatccaaagg
      541 ttaaaatcct cttttaatct atcaaaaaac ataaacacga ccgctaagat gcttcctagc
      601 tggataacaa cttcaaagca ttttaacacg cttgtttgct caagtccaag cagctttgcg
      661 ctaagtatca tatgcccagt cgagctaaca ggcaaaaact cggtcagacc ctcgactatt
      721 cctagtatta ctgcgtttaa aaaatccatt taattcctta ttatattgtt taaatttgtt
      781 atgttttcac tgatactttt tggagagtaa gcggcactta ctatagctat tagatcaggc
      841 ataagagcac taacttcttt taaatttaga gcatttattc cacctatgac acagatagga
      901 acgtttaaat tctcttttgc tttttttata gtattatggt cgcaaagagg agcgtttggc
      961 tttgtttggc ttggatacat cgctccaaaa gcaacgtaag aagcaccatc tttttgggct
     1021 tttagcgcta aacttatgtc attgtaacaa ctaactccta taatggagtt tttacctagt
     1081 agctcttttg ctttttttat atcttcatcg tcttttccga tatgaacacc gtgcgcaccg
     1141 caagcttttg ctagaaacgg atcatcgttt atgataaact ttgcgttaaa atcatcgcat
     1201 aaattagcta tggatttgag taattttata tcgtgatctt gtgttttgtt tctgtattga
     1261 attaacttga tacctgaatt taagagctct aaaatttgtt gggagatact gttttgcgga
     1321 gtgagttctt tgtcagttaa aacatataat tgacacattt taagtcctta aatttagccc
     1381 taaagtaggg ctaagctatt ttagatcgta tttttcaaga agtttttcgt atgttccatc
     1441 gcttttgata tcttctaaag ctttgttaaa tttggctaaa aactcactat gtttatcttt
     1501 atcaaacgcc attgcaaaac cgtcgcttcc gtcgttttct tcaagccatt ttactatgtc
     1561 ggcgtttttc ttaagatagc cgtatcctac tgaactatct actattacgg catcgacttt
     1621 gccggctttt aggttcatga tgcttcctgc tatgccttct gtggctatga cttttgcgcc
     1681 ttttatcccg tgagcaacgc tttcttggac tgtgcctagc attgcgccta tccttttttt
     1741 cttaaggtcg tcttttgaag cgatctcttt gtcggtcgcc atttttagat ataaattttt
     1801 tgtataaaaa taaggagacg agaaatcaac cgattttttt ctctcagttg tagcactcat
     1861 actagctgcg atagcgtcta ttttgccgac ttttagagca ggtattagag cgtcaaatcc
     1921 gacttttata aatttatact caaatccagc ttttttagat atagcatcca ctagatctat
     1981 gtcaaatcca gctattttat tgttttcatc catatagcca aacggaggat actcggcgtc
     2041 tgagccaaat atcaacgttt tggcgtttgc taagtttagc atcaataaca aagcaaagat
     2101 aaatttaaaa attctattca tcaaactctc ctttttattt gtttgaggct attttagatc
     2161 gtattttgca agcaatttat cataagtgcc atcacttttt agctcttcaa ctgcttgatt
     2221 gatctttgct accagatcgg tatgtttgtt tttatcaaaa gctatagaaa agccttcgct
     2281 accatctggt tcttttagaa actcagctag atctttgttc ttgtttaagt agccataacc
     2341 tatagaacta tctactaaaa cagcatcgac tttgccgttt ttaagcgcca ttatagctgc
     2401 aaatatatct tcgtttgcca taactttaac gcctttcata gcgcgagccg ctatttcttg
     2461 gacggttcct aattgtactg cgattttttt accatctaag ttttgctttg atgttagatc
     2521 accgttttta gcttgtttga taaataaatt ttccgtatta tagtaaggct ttgtaaaact
     2581 gactgccttt atgcgatcag gagttgcgct catggccgct gctaccgcgt ctattttacc
     2641 tgcttttaaa gcaggtatta gagcgtcaaa gctcatattt actatcttat attcaaatcc
     2701 tacttttttt gatagagcgt ctattagatc catatcaaaa ccggctatct tgttttgttc
     2761 atctataaac tcaaatggag gataagtggc atttgtgcct actcttatca cgtctgcggc
     2821 gtgagaaaaa ccagccgcta tacaagcaac aacgataaat ttaaaaaaac atttcatttt
     2881 gttttccttt ttttagtgat ttagtatctt gtttaaaaat tcgttcaaac gcggattagt
     2941 gcagttttca aagacgtttt tcggagtatc gtctactgcg atgatgcctt tatccataaa
     3001 aaatatccta tttgcaacgt ttttagcaaa tcccatctcg tgagttacta caagcatcgt
     3061 aagcccgtcc ttagcaacgt ctttcataat gctcaaaact tcacctatca tctctggatc
     3121 aagtgcgctt gtcggctcgt caaaaagtat gatatcaggc tccatagcaa ggcttctagc
     3181 tatggctatg cgttgttttt gtccgccgct tagtttatgc ggataagcat ttgccttgtt
     3241 cgcaagtccg acttttttta gcagttcgtt tgctttatcg tttgctgttt ttaggtcgta
     3301 aagtcctgtt tgaagcggag caagcgtgag attttgcatc acagttttgt ttgcgaaaag
     3361 attgaaatgc tgaaatacca tagatacttt ttggcgaatt ttatttatgt tgattttagg
     3421 gtctaaaata tctatgccgt ttataaaaat atgaccgctc gtaggctctt caagacggtt
     3481 aatgcagcgt aaaaacgtac tttttccacc gccgctaggt ccgatgatgg ctacgacttc
     3541 accttttttt atctcagtgc ttatactgtt taaaactttt aaatttccgt agttttttac
     3601 taaattttct attttaatca tttttgttta gcctattttc taagagtttt gcaagaagcg
     3661 aaaagaattt aacatttgcg tagtatataa ctcccgcaaa caagataggc tcgggactaa
     3721 atagagttgc ttgcaagctt ttactttgca tagtaagatc aaatatacct ataagtccga
     3781 cgaccgaagt ctctttaaat aggcttataa actcgtttgc aagagccgga agtatgtttt
     3841 taacggcttg aggaaagatg atttggcgca tagaaacgct gtagctaagt cccatagcgc
     3901 gagctgcttc catttgacct ttatctacgc tgtttatacc gcttcttacg atttcggcta
     3961 cgtatgcaga actgtttagt ccaagagcta ttaccgcggc gtaaaagtta tcgctaagag
     4021 tagcaagtat gacaaaggca aatatcatga gttgcaaaag taccggagtt cctcttacta
     4081 tatctatgta ttcgtctatg ataaatgata gaattttgat atttaaaaac tttaaaaaag
     4141 ctaatatgaa accaagtacg atacctataa aaataccgcc gaatgtaagt cctaacgtcg
     4201 taaaatatga atctacgtaa gcgccttttt gggcatctgt tatgctaact gggtaagtat
     4261 agtaaattcc tataattata atagctatgg aaaatataaa ctttaaaaat ttttcattat
     4321 ataaatttgt caatataaaa ccttgcttaa atttagaata atcgtaaatt atacaaaaaa
     4381 atatatattt ttaaacttaa atgtgataag ataactacta tattgttttt gggggtttta
     4441 aatgagtttg ggagcatata tcgctatcgc tttgtatttt ggcgtgcttt tagctatagg
     4501 aaaattatct tacaataaaa gatcaaattt aaatgagtat ttgctagata atagaagtct
     4561 tggaccgttt ataacagctc ttagcgccgg agctagcgat atgagcggtt ggatgttatt
     4621 aggtcttccc ggtgcgcttt atttaagcgg tatttcaaat atgtggattg ctataggact
     4681 tagtatagga gcttgggcga attataaata tttggcaaaa cgtcttaggg tttatacgga
     4741 agttgcagga gatagtatta cgattccaga ttatctagaa aatagattca aagacaaaac
     4801 aaaggtttta cgtataattt ccggcatttt cattttggta ttttttactc tttatgtaag
     4861 tagtggtatt atagccgggg ggcaagactt ttgaaagctt ttttggactt ggatttagct
     4921 ccggggccat tttaacgctt ttgatagttg tttcttatac attttttggc ggatttaaag
     4981 ctgtttgttt gacagatgca tttcaaggaa tgcttatgtt tttagtttta gttctcatac
     5041 cagtcgttgc ttttttaaat ttaaatatac ctgatggaga aaatttcttt agcgaattaa
     5101 ataaatatag taccgccgct aatcaagatc atttaaattt atttgccgga cagagttttc
     5161 ttggtatttt aggattgctt gcttgggggc ttgggtattt tggacaaccg catataatag
     5221 ttagatttat ggcgattaga aactcaaaag aacttgatag tgctagaaga ataggtatat
     5281 catggatggt tatcggtctc ataggtgcta tgtctagcgg acttatagga tttgtatatt
     5341 ttaatgaaat aagaagtcct ttaaacgatc ctgaaaccgt atttttaaag cttggcgaga
     5401 ctctgtttca tccatttatc gtcgacgtta taatatctgc tgttttggcg gcgattatga
     5461 gtactatatc aagtcagctg ttagtaagtg ctagctcgat aacaagggat tttatatttg
     5521 cattttataa aaaagacgta agtgataaaa ctcaagtttt ggttggacgt ttagcagtta
     5581 tattagttgc tatagtagct actttgtttg cgtttaattc tactgataca gtacttggtg
     5641 tcgtaggaaa tgcatgggct ggatttggag ctagttttgg acctgcgctt ttgtttagtt
     5701 tgtactcacg ccatatgagc gcactttcgg ctcttgctgg tatgatagtg ggtggagtga
     5761 ctgtgttgtt atggatagtt tttggtctta gtagcgttgt ttatgagttg cttccaggat
     5821 ttgtattttc tagtttggct atacttttgg taaataaata tagcaatatg atcaaaaaga
     5881 tgtctaacga acctaattta tctataatag gtgatgaatt tgataaaatg aaacaaggaa
     5941 gtagtaaaca aatttaattt cgcgatgatg tagttgctga atttaaaaat accttgatgt
     6001 tgtgaattat gattcgcata atactattgg tttaggctga attaagcaga taggattcaa
     6061 ggtaatttaa gtaattatta agtaaaaaaa gtatataatc ccaacttcaa ttcaagtggg
     6121 ttcatagctc agttggttag agcatccggc tcataaccgg atggtcccag gttcgagtcc
     6181 tggtgaaccc accactacac catttcttta attacattta cttacactta attactttta
     6241 cttcctttta attccgattt ttagggctaa aactcatcat ttacttcttt ttaattcttt
     6301 ttactataca attacttcca aatcattaag gttatttata aggtaattca tatcttataa
     6361 aggtaatttt attttttaga gggtaaaaat gccaaaaata tcaacagcaa atttatacga
     6421 taaagacatt aggggtttat tgccaaccaa taaaatatac aaaaaagcag taggcaatcc
     6481 aaaagagcta tacataaaag tctatccaag tggcttgaag atatttgtta tacaatacaa
     6541 aaacataaat cattttaaat taaaagaatt tagagaagga atttatagtg tagcagaggc
     6601 taggaaagat gccgtagaac tcattaggaa atttgaaaat ggttttgtaa ggtcaaaaga
     6661 taagtatcaa ctgaccgcgc tctttgaaaa atatatcgac aaaaaagaga agatagatca
     6721 gctggataag acatatttgg ataaagtcaa atctagaatg aaaacctata tactgcctaa
     6781 atttggaaat atcgatataa aggatattaa atttaatgat ctaaaaaata tattaatgcc
     6841 gctttttaat ccacacaatc caaaaaagtc aagactggaa acgatacacc gaataatcaa
     6901 tacgttaaat tcgctctacg aaaatgccat taaggataga tatatagact acaatccttg
     6961 caaggcttta cacgatgaat tcccaacgtc taataacttt agccttagaa acggcataga
     7021 tacaagatat ccagcaatta ccagcgaaac tgatttaaaa gagtttttga cagatctaag
     7081 agatgatagt agaatggatc tacaaaccaa aagagctcta atgcttcaaa ttttatgcgt
     7141 aaatcgacca gcaaacacgg caaatatgaa gtgggagcac ataaatttaa aaacagaaat
     7201 ttggagcata ccaccgcttg agatgaaaat gcggcacgcc caccaaattg ccctcagcaa
     7261 acaagcctta tcaatactac tggaacaaag acaatatacg ccgatacaaa gcgattttgt
     7321 atttcctgct gttacaaaga cagggcatat aagcagagat agtataagca aggctataag
     7381 aaatttagga tcaaaagaca aatatcactc aagggcttgc gctcacggat ttagagccac
     7441 atttaagacg atttgttcct tgcattttac agagcttgca agactaggta taagcgaaaa
     7501 gacaatagaa aacgcactag cccacacaga accaaacgcc gtaaaatacg cctacgaaag
     7561 acgaacggct acactagagc aaaacagaat attaatgcaa tggtatgcag attatctaaa
     7621 ttctattgtc aaatttatat aaaactaatt tttattttta agtttttaaa aaatattcaa
     7681 taaagcttaa taaaattctc ttgtgttttt taatggtttt tttactattt tttagctatt
     7741 gtaaaaaagt aaaatagcca aaatacggct tttacataac tctatttctc ggttttttaa
     7801 atttctaggt gc
//
LOCUS       DAPPKW010000087         7650 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.087, whole genome shotgun sequence.
ACCESSION   DAPPKW010000087 DAPPKW010000000
VERSION     DAPPKW010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7650
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.087"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            128..373
                     /locus_tag="RPW04_001659"
     CDS             128..373
                     /locus_tag="RPW04_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004319321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HDX6295743.1"
                     /translation="MNIYVGNLSYRMTESELREVFSSFGEVTRAKIVKDKETNRSKGF
                     GFVEMSSDEQAKKAIEGTNGKEVGGRALRVNEARPRD"
     gene            478..4473
                     /gene="dnaE"
                     /locus_tag="RPW04_001660"
     CDS             478..4473
                     /gene="dnaE"
                     /locus_tag="RPW04_001660"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDX6295744.1"
                     /translation="MSDFTHLHLHTEYSLLDGANKIKVLAKRLKELNIKSCAITDHGN
                     MYGALDFYKTMKAEGIKPIIGLEAYIHNHEDISNKESRQRFHLCLFAKNEVGYQNLMY
                     LSSMSYIKGYYYHPRINKKLLREHSEGLVCSSACLAGEVNFHLNLSDRNLKRGAGGYE
                     SAKRVALEYKDIFGDDFYLEIMRHGIGDQQRIDDDIIRLSMETGIKLIATNDAHYTTK
                     DSAVAQKIFVYISANKNFDDKVREQVLSEFYAKSADEMSAIFADMPEVIENTNEIVEK
                     CNLEIKLGDATPPNFKFTQEYAKERGIILPHPQNEYDLENDSFLFEYECKQGLEKRLE
                     FIDPSKHQIYKDRLDLEINTINNMKFPGYMLIVADFINEAKRRGIPVGPGRGSAAGSL
                     VAYALRITDIDPLPYNLLFERFLNPERISMPDIDVDFCQNRRGEVIDYVIEKYGEYNV
                     AQVATFGKLLAKGVIRDVARVMGMPYSEADAMAKLIPDELGITLKAHKNKKGDMEDGA
                     FEKEPKIGELIAKNDLAKQVWEYSCELEGLNRNPGMHAAGIVISNEELWKKAPLWKQS
                     NAEAGHYVTQYTKDYLEDVDLIKFDFLGLKTLTVIDNAKKLIKERFGVDILWEKIDFN
                     DQKTYETIQSGNTLGIFQIESSGMQSLAAKLRPDCFEDIIAMIALYRPGPLNSGMVDD
                     FIDIKHGKKKIEYAFAALKPILEPTYGVIVYQEQVMQVVQTVGGFSLGGADLVRRAMS
                     KKKEDEMLHLKTQYLEGAKRNGFDEGKADALFELIMKFAEYGFNKSHSAAYALITFQT
                     AYLKTYYPAEFMAALLTSEENNIDKIIKYIDEIKRLNIKLLPPNVNYSVREFSVIQKD
                     GSDSIIYGMAAIKGVGVGAVEDIIKAREDGPFESVDSFISKTDCTTVNRRVFESLIKS
                     GAFDDFGFTRKMLIHNLETIIENSKRISDIKKNATNSLFSDDDSMSEISVDLVNIKDE
                     FDKKEILKFEQEILGVYVSGHPLDEYRDKIDKINYTVSSEFENVEDGSEILVVGKIED
                     TTTKITKTGKKMAIINILDIHGNIEATAFDEYKKIESMSQNELDEPHAFKIILNKDGQ
                     QFKLKINDIISLDDALYKRFTLKSSKLTDDEVFKFQNYFDTIKHATIKDIPNLTKESE
                     ILIIGKMSHINIRTTKSGMEMAILNIVDISGNSEMIAFDSTSKFIANMSEDEQDTIYA
                     FKVAPNKDAQSKPIINQIISLDDAKDGNFTLKTNRRRYESRVNEQSTSATIIGKLEVD
                     IDIISLDKQKINYIYQLAHSYHQKNGNKRLLLRITNNYDKEVMIFSTEFIVSDEFKSE
                     LDAILNEAKAG"
     gene            complement(4460..5461)
                     /locus_tag="RPW04_001661"
     CDS             complement(4460..5461)
                     /locus_tag="RPW04_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002852488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDX6295745.1"
                     /translation="MSELLTNNSETKHIQDGLKSLIEQTYLIEKEYKTLTTSYANLQK
                     FIQDIVESLGAALWVIDIDGKAVLKNAKADENEHILSLIDFRKTNQEVEFGSQFYAIK
                     ITQNDGNKIILATDISDEKRSARLVSMGAVAAHLSHEIRNPIGSISLLTSTLLKRADD
                     KNRPLIEEIQKAIFRVERIIKATLLFTKGVCINKQVFNLEKLEQNCKVAISQYAFSKE
                     IKFVFSGFNSEIIGDMDLLDMVFSNFIFNAIDAIEEDESESGTIKIEHKFENNEHNFY
                     ISDSGVKIDKDIVFEPFKTTKLKGNGLGLALSIEIISAHKGSIALQNDPKVFTISLP"
     gene            complement(5454..6239)
                     /locus_tag="RPW04_001662"
     CDS             complement(5454..6239)
                     /locus_tag="RPW04_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HDX6295746.1"
                     /translation="MFDRILKNYDNIFEAIEYEILRNYKNISKHFDFDENDKEIKIFL
                     KKLARSDRKRFNTLKQIPRRIGSVIINNLLSKNIIQIEKSREIKPKSTKHHKIKKELR
                     HYQVQDKIHFKNNFTRFWFRFCEPNLELLDKNEFETVLNLIKQGFELYCSLPFELACM
                     ELLAKELNIQKELITSYWDKENEIDIFVEFDGFTVVGEAKYKDRKICKNVLNILQAKC
                     KRSNLNPNLIALFSKSGFSNELLNLKNDKILLFEINDFKDIYE"
     gene            6410..>7650
                     /locus_tag="RPW04_001663"
     CDS             6410..>7650
                     /locus_tag="RPW04_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HDX6295747.1"
                     /translation="MLNLEKVRENIILKEGIYYFDWTASGLGYKGVEDEILRVLHTYS
                     NTHSECSDCAKITTNYYENARNGLKTLLEISDDFYLLPCGFGSTAAIKKFQEIMGIYL
                     PPATKTILQNVISNLKNDSLPLVIVSPYEHHSNEVSFRSGLCEIYRVPLALDGGIHWG
                     ELDRVLKINRNRRIIASFSAASNVTGVKTDIANLYKMVKKYNGIVALDASSISPYENI
                     PCDLYDALFISPHKLLGGVGSSGLLVIKKELCSSAQPTFAGGGTVSYVSRKSVKYLDN
                     VELLEDAGTPGIIELIRGYLAFKLRNDIGLDRIKKIEQQHLEYFEDSLKSIKNMICYC
                     PKSALKLPIFSFNIKDISPYVLANTLSAKFGVQSRAGCACAGPYGHDLLGLKDDDEFL
                     NKPGFVRVSLHYTHTKDDIDYL"
BASE COUNT         2675 a         1114 c         1384 g         2477 t
ORIGIN      
        1 atttttacaa attttgaaaa tatttacgaa aagtttagat ttactatagc tttttatggt
       61 taatttaggt attattatat caaccgaatt tatacggaat aaatagcagt aaggaatagt
      121 agttgtgatt aacatttatg ttggtaatct gtcatatcga atgacagagt ctgagcttag
      181 agaagttttt agtagttttg gtgaagttac acgcgcaaaa attgtaaaag ataaagaaac
      241 aaatcgttct aaaggttttg gatttgtcga aatgagtagt gatgaacaag caaaaaaagc
      301 tattgaagga accaatggca aagaagttgg cggtagagca cttagagtaa atgaggctag
      361 accaagagat taatctcaaa cgggcttgtt tcaagccctt tttttctaca aaaatttaat
      421 acgagtaagc tttattttag tacttatatg atacaattta tcaaataagg aaaactaatg
      481 agcgatttca cacatttaca tttacatacc gaatattcat tgttagacgg tgcaaacaag
      541 ataaaagttt tagccaaaag attaaaagag ctaaatataa aatcatgcgc tataaccgat
      601 cacggaaata tgtatggggc gcttgatttt tataaaacta tgaaagccga gggtataaaa
      661 cctatcatag gacttgaagc ttatatacat aatcacgaag atataagcaa caaagagagt
      721 aggcagagat ttcacctttg tctatttgct aaaaatgagg taggatatca aaatcttatg
      781 tatcttagct caatgtcgta tataaaagga tattactacc atccaagaat caacaaaaaa
      841 cttttaagag aacatagcga aggtttagta tgcagctctg catgccttgc tggagaagta
      901 aatttccatt taaatttgag tgatagaaat ttaaaaagag gagccggcgg atatgaatct
      961 gccaaaagag ttgctttgga atataaagat atatttggcg atgattttta tcttgagatt
     1021 atgagacacg gtataggtga tcaacaacga atagatgatg atataatcag gctttctatg
     1081 gaaaccggta taaaactaat agctacaaac gatgcccatt ataccacaaa agatagtgca
     1141 gtagctcaaa agatatttgt atatatctca gcaaataaaa atttcgatga taaagtacga
     1201 gaacaagttc taagcgagtt ttatgccaaa tcggctgatg agatgagcgc tatttttgcc
     1261 gatatgccag aagttataga aaatacaaac gagatagtag aaaagtgcaa tttagaaata
     1321 aaattaggag acgctactcc accaaatttt aaatttactc aagaatatgc aaaagagcgc
     1381 ggtataatcc tgcctcatcc gcaaaatgaa tatgatttag aaaatgatag ttttttgttt
     1441 gagtatgagt gcaaacaagg acttgaaaaa agactcgagt ttatcgatcc gtctaagcat
     1501 caaatttata aagatagatt agatcttgag ataaatacga taaataatat gaaatttccg
     1561 ggctatatgc ttatagtggc cgacttcata aacgaagcaa aaagacgagg aattccagta
     1621 ggtcctgggc gtggaagtgc agctggaagc cttgtagctt acgctcttcg cattactgat
     1681 attgatccgt tgccttataa cttgctattt gaaagatttt taaatccaga gcgtataagt
     1741 atgccagata tcgatgtgga tttttgccaa aataggcgag gggaagttat agattacgtc
     1801 atagaaaagt atggggaata caacgtcgcc caagtagcaa catttggtaa gcttttggca
     1861 aaaggcgtta taagagacgt tgcaagagtt atgggtatgc catattccga agcagatgct
     1921 atggcaaaac ttataccaga tgagttggga attactttaa aagcgcataa aaataaaaaa
     1981 ggcgatatgg aagatggagc attcgaaaaa gagccgaaaa taggtgaact tatagcaaaa
     2041 aatgacttag caaagcaggt ttgggaatat tcttgtgagc ttgaaggatt gaatagaaac
     2101 cccggaatgc atgctgcagg tattgttata agcaatgaag agctatggaa aaaggctcct
     2161 ttgtggaaac aaagcaatgc cgaagccggt cattatgtaa ctcaatacac aaaagattac
     2221 cttgaagatg ttgatcttat caaatttgac ttcttgggac ttaaaactct aacagtaatc
     2281 gataatgcaa aaaaactaat taaagagcgt tttggcgtag atattttatg ggaaaaaata
     2341 gatttcaacg atcaaaaaac ttatgaaact attcaaagcg gaaatactct gggtatattt
     2401 cagatagagt caagcggtat gcaatctctt gctgcgaagc ttagaccgga ttgttttgaa
     2461 gatatcatag ctatgatagc gctttatcgt cccggacctt tgaattccgg aatggttgat
     2521 gattttatag atattaagca cggcaagaaa aagatagaat acgctttcgc cgctttaaaa
     2581 cctatactcg aaccgacgta cggagttata gtttatcaag agcaagttat gcaagttgtt
     2641 caaacagtcg gaggatttag ccttggaggc gcggatcttg taaggcgcgc tatgagtaag
     2701 aaaaaagaag atgaaatgtt gcatctcaaa actcagtatt tagaaggagc aaaaagaaac
     2761 ggctttgatg aaggcaaagc agacgcactt tttgagctta ttatgaaatt tgcagagtat
     2821 ggatttaaca aatcccactc agcggcttat gcgcttataa cttttcaaac agcgtattta
     2881 aaaacatatt atccggcaga atttatggct gctttgctta ctagcgaaga gaacaatata
     2941 gataaaatta taaaatatat cgatgagata aaaagactta atataaagct acttcctcca
     3001 aatgtaaatt attcggtaag ggagtttagt gttatacaaa aagatggaag cgactctatt
     3061 atatacggca tggcagcgat aaaaggcgtt ggagtaggcg ctgtggaaga tatcataaaa
     3121 gctagagaag acggtccttt tgaaagcgtt gatagcttta tatcaaaaac agattgcacg
     3181 actgtaaata gacgcgtttt tgaatctctt ataaaatctg gcgcatttga tgactttggt
     3241 tttactagaa agatgctcat acataatcta gaaactatca tagaaaactc aaaacgtata
     3301 tcggatatca aaaagaatgc tacaaattct ctatttagcg atgatgatag tatgagtgag
     3361 ataagcgttg atcttgttaa tatcaaagat gaatttgata aaaaagagat attgaaattc
     3421 gagcaagaga tacttggagt ttatgtttcg ggtcatccat tagacgagta tagagataaa
     3481 atagataaga taaattacac agtatcaagt gaatttgaaa atgtagaaga tggaagtgag
     3541 atattagtag taggtaagat agaagataca actacaaaga taacaaaaac aggtaaaaaa
     3601 atggctatca taaatatcct tgatattcat gggaatatag aagctaccgc atttgacgag
     3661 tataaaaaaa tagaatctat gagtcaaaat gagcttgatg agccacatgc gtttaaaatt
     3721 attttaaata aagacggtca gcagttcaag ctaaaaataa atgacataat aagccttgat
     3781 gatgctttat ataagagatt tacgctgaaa tcaagcaagc ttacggatga cgaagtattt
     3841 aaatttcaaa attattttga tactatcaag cacgctacaa taaaagatat tccaaattta
     3901 accaaagaaa gtgaaatact tatcataggg aaaatgagtc atataaatat tagaacaact
     3961 aaaagcggta tggaaatggc tatattaaat atagttgata taagcggtaa ttccgagatg
     4021 atagcttttg attctactag taaattcata gccaatatga gcgaagatga acaagataca
     4081 atatacgctt ttaaagttgc tccaaataaa gatgctcagt caaaacctat aataaatcag
     4141 atcatcagtc ttgatgatgc aaaagatgga aatttcactc ttaaaacaaa tagaagacga
     4201 tatgagtcta gagtgaatga acaaagcacc tctgctacta taataggaaa gcttgaagtt
     4261 gatatagata ttataagttt agataagcaa aaaataaatt atatttatca acttgctcac
     4321 tcttatcatc aaaaaaatgg aaataaaaga ttattactta gaataactaa taattacgat
     4381 aaagaagtga tgattttcag cactgaattt atcgttagtg atgagttcaa atcagagtta
     4441 gatgctatac taaacgaagc taaggcaggc taatagtaaa tacttttgga tcattttgca
     4501 aagcaatgct tcctttgtgg gctgagataa tctctatact aagagcgagt cctagcccgt
     4561 ttccttttaa ttttgtcgtt ttaaacggct caaaaacgat atctttatct atttttactc
     4621 cgctatcgct tatataaaaa ttatgttcat tattttcaaa tttatgctct atttttatcg
     4681 ttccgctttc gctttcatcc tcttctatgg cgtctatagc attaaatata aaattactaa
     4741 aaaccatatc gagcagatcc atatcgccta tgatttctga attaaatcca ctaaagacaa
     4801 acttaatttc tttactaaaa gcatattgag agattgctac tttacagttt tgctcaagct
     4861 tttctaagtt aaatacctgc ttgtttatac atacgccttt tgtaaatagc agagttgctt
     4921 taatgatgcg ctcaactcta aaaatagctt tttgtatctc ctctatgaga ggtctatttt
     4981 tgtcatcggc tctttttaaa agagtgcttg tgagcaaaga aatagatcct ataggatttc
     5041 taatctcatg cgagagatga gctgctactg ctcccatgga tacgagtctt gcacttcttt
     5101 tttcatcgct tatatctgtt gctaggatta ttttatttcc gtcattttga gtgattttta
     5161 tagcataaaa ttgcgagcca aattctactt cttgatttgt ttttctaaaa tctattaagc
     5221 ttaagatatg ctcgttttca tctgcttttg cattttttag tacggctttg ccatctatat
     5281 ctatcaccca taaagccgca cctaagctct caacgatgtc ttggataaat ttttgtaaat
     5341 ttgcatatga agtggttaaa gttttatatt ctttttctat aagataagtc tgttctataa
     5401 gactttttaa tccatcttga atatgttttg tttcgctgtt gtttgtcaat aattcactca
     5461 taaatatcct taaaatcgtt tatttcaaat aatagtattt tatcattttt taaatttaaa
     5521 agttcattgc taaagcctga ttttgaaaat agtgctatta aatttggatt taaatttgat
     5581 cttttgcatt ttgcttgaag tatatttaat acattcttgc atatttttct atctttgtac
     5641 tttgcttctc caactacggt aaatccatcg aattctacaa aaatatcaat ttcgttttct
     5701 ttatcccagt agctcgtaat taactctttt tgtatattta actcttttgc taaaagctcc
     5761 atacacgcta gttcaaaagg cagcgaacag tatagttcaa atccttgctt tattaaattt
     5821 aaaacagttt caaactcatt tttatctaat agttctaaat ttggctcaca aaatctaaac
     5881 caaaatcttg taaagttgtt tttaaaatgt attttgtctt ggacttgata gtgtcttagt
     5941 tcttttttga ttttgtgatg tttggttgat ttcggtttta tctctctgga tttttcgatt
     6001 tgtataatat tttttgataa taagttattt attattacgc ttcctattct acgtggaatt
     6061 tgctttaatg tgttaaatcg ctttctatcg cttcttgcaa gttttttgag aaatattttt
     6121 atctctttat cattttcatc aaaatcaaag tgtttagata tatttttata attacgcaaa
     6181 atttcatact cgatagcttc aaaaatatta tcataatttt tcaaaattct atcaaacaca
     6241 aagtaaaact caagtatgtt ttgtactcca gtatcgttgc cggagtctaa aaatttactt
     6301 gttataacta tctcctcatt gttttagtaa ttatacaaaa aactagttta aatttgaaat
     6361 cttaatcttg tttgttgtat aattatataa aaataattag gaaatattgt tgctaaattt
     6421 agaaaaagta agagaaaata taattttaaa agaggggatt tattattttg attggacggc
     6481 ttctggactt ggatacaaag gcgtcgaaga tgaaatttta agagtattgc atacatattc
     6541 gaatactcat agtgaatgta gcgattgtgc gaaaattact acaaattatt atgaaaatgc
     6601 tagaaacgga ttgaaaacgc ttttggaaat tagtgatgat ttttatcttt tgccttgtgg
     6661 atttgggagt accgcagcca taaaaaaatt tcaagaaatt atgggaattt atcttcctcc
     6721 tgcgactaaa accatacttc aaaacgtaat ttcaaattta aaaaacgact ctttacctct
     6781 tgttatagtt agtccttatg aacatcatag caacgaagtt agctttagaa gcggtctttg
     6841 tgaaatttat agagttcctt tagctcttga tggcggtatc cactggggtg agctagatag
     6901 agttttgaaa ataaatagaa atagaagaat tatagcgagt tttagcgctg cttcaaatgt
     6961 aactggcgtc aaaaccgata ttgcaaattt atataaaatg gtaaagaaat ataacggtat
     7021 agtggcatta gacgcttcaa gtatttctcc ttatgaaaat ataccctgtg atctatatga
     7081 tgcacttttt atttctcctc ataaactttt aggcggcgtt ggtagttctg ggcttttggt
     7141 tattaaaaag gagctttgta gcagcgctca gcctacattt gcaggtggtg gtactgtaag
     7201 ctatgtaagt agaaaaagcg taaaatattt agataatgtc gagcttttag aagatgcggg
     7261 aacccctgga ataatagagc taataagagg ttatctagct tttaaactaa gaaacgatat
     7321 cggtttagat aggattaaaa agatagaaca gcagcatctc gagtactttg aagatagtct
     7381 aaaaagtata aaaaatatga tttgctactg tccgaaatcc gctttaaaac tacccatatt
     7441 ttcgtttaat ataaaagata tctctccata cgtattggca aatactttaa gtgctaaatt
     7501 tggcgttcaa tcacgcgccg gttgcgcttg cgccggacca tacggacacg acttgctcgg
     7561 gcttaaagat gatgatgagt ttttaaataa gcccggtttt gtaagagtta gtctgcacta
     7621 tactcataca aaagatgata tagattatct
//
LOCUS       DAPPKW010000088         7625 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.088, whole genome shotgun sequence.
ACCESSION   DAPPKW010000088 DAPPKW010000000
VERSION     DAPPKW010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7625)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7625)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7625
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.088"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..366
                     /locus_tag="RPW04_001664"
     CDS             <1..366
                     /locus_tag="RPW04_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HrcA family transcriptional regulator"
                     /protein_id="HDX6295748.1"
                     /translation="VEKFLNNLVGISLEELDRISIQVGLSELRAKIKELKRSRIYFQE
                     NEKVAFEICKDERIKTILDPAFEHYFRSNLAFKPVFNSGYMGIKTDVIYEGKNAVMIC
                     AGSVYSDYEKFLNSIKEAA"
     gene            363..884
                     /locus_tag="RPW04_001665"
     CDS             363..884
                     /locus_tag="RPW04_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDX6295749.1"
                     /translation="MSEDTNKNENVDNIPDNFDDNVSFTKLNEDVKDELALAKESLMR
                     ATADFENIKKRLEREKGEAVKFANESFARDLLPVIDALEIASNLQSGDDEIANKIKDG
                     INLTIEQFKKCFEKYGIKEIITDAEFNPEFHNAINYIESDEVESGKIAAVYQKGYLYN
                     DRVLRPSMVVIAK"
     gene            923..2803
                     /gene="dnaK"
                     /locus_tag="RPW04_001666"
     CDS             923..2803
                     /gene="dnaK"
                     /locus_tag="RPW04_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDX6295750.1"
                     /translation="MSKVIGIDLGTTNSCVSIYERGESKVIPNKEGKNTTPSVVAFTD
                     KGEILVGDTAKRQAVTNPEKTIFSIKRIMGLMMNEKNAKEAKNRLPYHIVDRNGACAV
                     EIAGKTYTPQEISAKVLMKLKEDAEAFLGESVVDAVITVPAYFNDSQRKATKEAGTIA
                     GLNVLRIINEPTAAALAYGLDKKEAEKIVVYDLGGGTFDVTVLETGDSVVEVLATGGN
                     AFLGGDDFDNRLIDFLVSEFKSETGIDLKNDVMALQRLKEAAENAKKELSSAMETTIN
                     LPFITADATGPKHLTKTLSRAKFEGMIDDLVGETITKINEVVKDAGISKGDIKEVVMV
                     GGSTRVPLVQEEVKKAFSKELNKSVNPDEVVAIGAAIQGAVIKGDVKDVLLLDVTPLS
                     LGIETLGGVMSKLIEKGTTIPTKKSQTFSTAEDNQSAVTINVLQGEREFAKDNKSLGN
                     FNLEGIMPAPRGVPQIEVTFDIDANGILTVSAKDKASGKAQNITISGSSGLSEEEINK
                     MVNDAEAHKEDDKKRKEAVEARNAADSLAHQTEKSLSEMGEKIPAEDRAKIEAALNDL
                     KEVLKDESASKEQIDVKVKALSEVSHKLAEAMYKDQNAGAADGGAEKKKKDDDVIDAE
                     VE"
     gene            complement(2956..3786)
                     /gene="ppk2"
                     /locus_tag="RPW04_001667"
     CDS             complement(2956..3786)
                     /gene="ppk2"
                     /locus_tag="RPW04_001667"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HDX6295751.1"
                     /translation="MEEKKDDFIMVKVKKSKLKYEKELRQLQIELLKFQNHVKETGLK
                     VLIIIEGRDASGKGGVIKRLTEHLNPRGCRVVALEKPSDVERTQWYFQRYSDHLPSAG
                     EIVIFDRSWYNRAGVEPVMGFCTQEQHKEFLRQVPKFEEMLVSSGILLFKFYFSVSKD
                     EQKKRFKDRKTDPLKQFKLSPVDQRSQELWDQYTVAKYSMLLASNTPYAPWTIIVSND
                     KKKARLNTFRYLLNNVEYNKKISNDEMKIDDEIVKTGSTEIRLMEENLRNENLKRING
                     "
     gene            3920..5668
                     /gene="dsbD"
                     /locus_tag="RPW04_001668"
     CDS             3920..5668
                     /gene="dsbD"
                     /locus_tag="RPW04_001668"
                     /EC_number="1.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016647398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HDX6295752.1"
                     /translation="MHKLLISFILLFSTVFAEPLSVEDAFKVNITGDKTQGININLVV
                     DKSVYLYKDKLKVKVSDTDITEFLNLPKYEKHDEYDIYGGTFDLFIPEGLLKNFVNSN
                     EFDIQLNYQGCSYSGFCYQPIESHYVVTYDGDKAQVKEVSASKIISSNSKINKKNIVD
                     SQQDKIAKSFTDEGKLFTIITFFGYGLLLSLTPCIFPMIPIVSSIIVSKTGQKPSAKT
                     GFWISLVYVFFMSLAYALAGVLASVFGASVQGLLQIPSVIIGFSIIFVLLSFSMFGFY
                     NIEMPKKIQNYINLKSEKKGGIIGVGIMGFLSALIVGPCVAAPLAGALLYIAESGDAL
                     FGGIALFVMSVGMGVPLLLIGIGSSKLLPKPGFWMEEIKRIFGFLMLAMAIWMLDRVV
                     GSEISNALYGVLGVFFAVYLGAFNEAKDGAAKFLKSFGILIFVVSIILVSIFSISTFA
                     PNLSSYNNSTILKNSIDKIEFSYISNSKDLEAVINSSQKPVMIDFWAIWCVNCKELDE
                     KTFTNPDVIKRLKDFTLIKIDVSDNTPEDIAMMRKYNVFGPPALIFYKDKKELNSKQL
                     VGYVSYDEFLKHIEDI"
     gene            complement(5704..6762)
                     /locus_tag="RPW04_001669"
     CDS             complement(5704..6762)
                     /locus_tag="RPW04_001669"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDX6295753.1"
                     /translation="MEKVKEKIDWYLKIMNIKSDNLSTNLRTVLIMFLVASISYFISF
                     ISLKMYDLAIVSIVGVFTYIFCIKTVGKNELEKAFFIAHIQILFSSSISVLILGWGYG
                     FQIILIALISIMYIDIFRNRLISYILVLSESIIYIALYLVHISNEGEQSVSYYQDYFY
                     VANFIFLIVMLLIISKILKSTDIAYFYQLKDDNDKFKNASETDDLTGLINKRTLNLII
                     DNKRRSSMVISMCDIDNFKQINDQFGHNTGDLVLKTLSNIFLDHTNKTDIVCRWGGEE
                     FVIVSFDISKNDFLTKIQKIKFQISETIIKEGNETFNFSVTFGVSEVGNDRNLLIKQA
                     DERLYKGKNSTKNCIVSK"
     gene            complement(6704..>7625)
                     /locus_tag="RPW04_001670"
     CDS             complement(6704..>7625)
                     /locus_tag="RPW04_001670"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HDX6295754.1"
                     /translation="ISIIIYDELYEEKYQSLINIWIQLSGTYNIVCDIIVMGWGYGFE
                     LFLVGLIAIYYSSAIKNSYFKIIIVVAQSITYLVLHYLFAHQDINYGNDDLKHISYIS
                     GFLAIVFVFFFLHQNLNIVGAVDILNLQRKKKDYQRIAEHDFLTGFYTRAPMRQMLTS
                     RLSMLKNEELKSICIILCDLDNFKNINDTLGHIFGDTILSRVAASLKSSFIKYGKLCR
                     WGGEEFLIILENKNATDIKDIIESARLKVEKLNPEGIKVSVTFGALYLTKIEADFELE
                     PAISIVDELMYYGKSQGKNRLVFKNYEYKK"
BASE COUNT         2569 a         1144 c         1380 g         2532 t
ORIGIN      
        1 gtagagaaat ttttaaataa cttagtagga attagtcttg aagagcttga taggatatct
       61 atacaagtgg gtcttagtga gcttagagct aaaataaaag agttaaaaag aagtagaatt
      121 tacttccaag aaaatgaaaa agttgcattt gagatatgta aggatgagag gataaaaact
      181 atcttagatc ctgcttttga acactatttt agatcaaatt tggctttcaa accggttttt
      241 aactcgggtt atatggggat taaaaccgat gttatttatg agggtaaaaa tgccgtaatg
      301 atctgtgctg gtagtgttta tagcgattat gagaaatttt taaatagtat taaggaggca
      361 gcatgagcga agataccaat aaaaacgaaa atgtagataa tatacccgat aattttgatg
      421 ataatgtgag ttttactaaa ctcaatgaag atgtaaaaga tgagttagct ttagcaaaag
      481 agagcttgat gagggctact gcggattttg aaaatatcaa aaagcgcctt gaaagagaaa
      541 agggcgaagc ggttaaattt gcaaacgaga gctttgcaag agatctgctg cccgtcattg
      601 atgctttaga gatcgcttca aatttgcaaa gcggagatga tgaaatagca aataaaataa
      661 aagacggtat aaacttaacg atagaacagt tcaaaaaatg ttttgaaaaa tatggaatta
      721 aggagattat aacggatgca gagtttaatc cggaatttca caacgccata aattatatag
      781 agagcgatga ggtagaaagc ggtaagatag ctgctgttta tcaaaaaggt tatctatata
      841 atgatagggt tttaagaccg tctatggtcg taattgccaa gtaaataaga attaagtaaa
      901 ttaaatttaa aaggataaaa aaatgagtaa agtaatagga atagatttag gaacaacaaa
      961 ttcatgcgta agcatatatg aaagaggaga aagcaaagtt ataccaaaca aagagggtaa
     1021 aaatactact ccttcagtgg tagctttcac tgataaaggc gagatcttag taggtgatac
     1081 ggcaaaacgt caagcagtaa caaaccctga aaagactata ttttctataa aaagaattat
     1141 gggtcttatg atgaacgaga aaaatgccaa ggaagcaaaa aaccgccttc cgtatcatat
     1201 agtagataga aatggtgcgt gcgccgttga gatagctggt aaaacatata ctccgcaaga
     1261 aatttctgct aaagttctta tgaaattaaa agaagatgca gaggcgtttt taggagagag
     1321 cgtcgtggac gccgttatca cggtgcctgc atacttcaat gatagtcaga gaaaggctac
     1381 aaaagaagca ggaactatcg caggactaaa cgtacttcgt atcataaacg agcctacggc
     1441 tgcggctctt gcttacgggc ttgataaaaa agaggctgaa aaaatcgtag tttatgactt
     1501 aggcggtggt acgtttgacg taaccgtgct tgaaacaggc gatagtgtag ttgaggtttt
     1561 agcaactggt ggtaacgctt ttttaggcgg tgatgatttt gataatagac ttatcgactt
     1621 tttagtaagt gagttcaaaa gtgaaacagg gattgatcta aaaaacgacg taatggcact
     1681 tcaaagacta aaagaagctg ctgaaaatgc taaaaaagag ctaagtagtg ctatggagac
     1741 aactataaat cttccgttta tcacagctga tgcgacagga ccaaaacacc ttacgaaaac
     1801 tcttagcaga gctaaatttg aaggtatgat agacgactta gtaggcgaaa ctatcacaaa
     1861 gataaacgaa gtagtaaaag acgccggtat aagcaaaggc gatataaaag aagtagttat
     1921 ggtgggtggt tcaactcgtg ttccgctggt acaagaagag gtcaagaaag catttagtaa
     1981 agaactaaac aaatcagtaa atcctgatga agtagtcgcc atcggagctg ctatacaagg
     2041 cgctgttata aaaggtgacg taaaagacgt gcttttactt gatgttactc cgctaagtct
     2101 tggtatcgaa actcttggtg gagttatgag caaacttata gaaaaaggaa ctacgatccc
     2161 tactaaaaag tctcaaactt tctcaactgc cgaagataat caaagtgcgg ttactataaa
     2221 cgtgcttcaa ggcgagcgtg agtttgcaaa agacaacaaa agtttaggta acttcaatct
     2281 tgaaggtata atgccagctc ctagaggcgt tccgcaaatc gaagttacgt ttgatataga
     2341 cgcaaacgga attttaactg tttcggctaa agataaggct agcggtaaag ctcaaaatat
     2401 cactataagc ggttcaagcg gtcttagcga ggaagagata aataaaatgg taaatgacgc
     2461 cgaagctcat aaagaagatg acaaaaaaag aaaagaagcc gtagaagcta gaaatgcagc
     2521 agatagtttg gctcatcaaa ccgaaaaatc tctaagcgag atgggtgaaa aaattccggc
     2581 cgaagataga gcaaagatcg aagctgcttt gaatgatcta aaagaggtat taaaagatga
     2641 aagtgcttca aaagagcaga tcgatgtaaa agtaaaagct ctaagcgaag ttagtcataa
     2701 actagccgaa gctatgtata aagatcaaaa tgcaggtgca gcggatggtg gcgcagagaa
     2761 aaagaaaaaa gacgatgatg ttatagacgc agaagtcgaa taaatttatc tataaattct
     2821 ataaatggag ttgcgattaa attcgtaact ccaaatgcaa agatatataa attcagttat
     2881 agttttttgc ttattaaatg ttttaaattt aagtataatt ttaagtgtca aattcgcaag
     2941 actattaaaa atttactacc cgtttatacg ttttaaattc tcatttctga gattttcttc
     3001 cataagtctt atctccgtac ttcctgtttt gactatttca tcatctattt tcatctcgtc
     3061 attgcttatt tttttattat attcgacatt gtttaataga tatctaaatg tgtttaatct
     3121 agcttttttc ttatcgttac taactatgat agtccatggc gcataaggcg tatttgaagc
     3181 tagtagcatt gagtactttg cgactgtgta ttgatcccat agttcttgac tcctttgatc
     3241 tactggagat agtttgaact gttttagtgg atctgttttt ctatctttga aacgtttttt
     3301 ctgttcatct tttgaaaccg agaagtagaa tttaaacagt aaaattcccg aacttaccag
     3361 catttcttca aatttaggaa cttgccttaa aaattcttta tgttgctctt gagtacaaaa
     3421 tcccatcaca ggttcaactc cagcacgatt ataccagctt ctatcaaata taactatctc
     3481 accggcactt ggaagatggt ctgagtatct ttgaaaatac cactgagttc tctcaacatc
     3541 gcttggtttt tccaaagcga cgactctaca tcccctagga tttagatgtt cggtaagtct
     3601 tttgatgacg ccgccttttc ctgacgcgtc tcttccttct attataatca atacttttag
     3661 accagtttct tttacatggt tttgaaattt gagcagttca atttgtaatt gtctaagctc
     3721 tttttcgtat tttaatttag atttttttac tttcaccata ataaaatcat cttttttttc
     3781 ttccattttt gctccttttt aaagtgtata taattttata cttagttaat taaaagtttc
     3841 attaaagttt accgcttttg atgaagatat ttacaaatat gaagtagaat tgacaaatat
     3901 ttttttacaa ggaaatgcat tgcataagct acttatttca tttatcttgc tttttagtac
     3961 tgtttttgct gagcctctta gcgtagaaga tgcttttaaa gtcaatatca caggcgataa
     4021 aacgcaaggg ataaatatca atctcgtagt agataaaagt gtttatttat ataaagacaa
     4081 acttaaagtt aaggtttcag ataccgatat aaccgagttt ttaaatttac ctaaatacga
     4141 aaaacacgat gagtatgata tatacggcgg tacgtttgat ctatttatac cggagggttt
     4201 gctcaaaaat tttgtaaata gtaatgagtt tgacatacaa ttaaattatc aaggttgctc
     4261 ttatagtgga ttttgttatc agcctataga gagtcattat gtcgttactt atgatggcga
     4321 taaagctcaa gtaaaagagg tatctgcttc aaaaattata tcttcaaatt ccaagataaa
     4381 taaaaaaaat atcgttgact cgcagcaaga taagatagca aaatcattta ccgacgaggg
     4441 aaaacttttt actatcatca cgttttttgg ttatggtttg cttttatctc ttacgccttg
     4501 tatctttcct atgatcccga tagtttcaag cataatagta tcaaaaacag gtcaaaaacc
     4561 atcggctaaa acaggttttt ggataagtct tgtttatgta tttttcatgt cattagctta
     4621 cgctttggcc ggagttttgg caagtgtatt tggtgcaagc gtccaaggat tgcttcaaat
     4681 tccaagcgtt attataggtt ttagtatcat ctttgttttg ctatcgtttt ctatgttcgg
     4741 attttataac atcgagatgc caaaaaaaat tcaaaactat ataaatttaa agagtgaaaa
     4801 aaaaggtgga ataatcggtg tcggaattat ggggttttta tccgctctta tagtgggacc
     4861 ttgcgttgct gcacctcttg ccggagctct tttatatata gctgaaagcg gagatgctct
     4921 ttttggaggt atagctctat ttgttatgag tgtcggtatg ggagttcctc ttttattgat
     4981 aggtattggt agttcaaaac tacttcctaa gcccggattt tggatggaag agataaaaag
     5041 aatatttgga tttttgatgc ttgcgatggc tatctggatg cttgatagag tagttggatc
     5101 tgaaatttca aatgcgcttt atggagttct cggagtattt tttgcggtat atttaggcgc
     5161 gtttaacgaa gcaaaagacg gtgctgcgaa gtttttaaaa tcgtttggaa tattgatatt
     5221 cgtagtttcg ataatcttag tttctatatt tagtatttcc acttttgctc cgaatttaag
     5281 ctcatataat aattctacga tattaaaaaa cagcatcgat aaaatagagt ttagttatat
     5341 ttcaaattca aaagatcttg aagccgttat aaatagcagt caaaaacctg ttatgatcga
     5401 tttttgggcg atttggtgcg taaactgtaa agagcttgat gagaaaacat ttacaaatcc
     5461 ggatgttata aaaagattaa aagattttac tcttatcaaa atagatgtct ctgataatac
     5521 gcctgaagat atagctatga tgagaaaata caatgttttt ggtccaccgg cacttatatt
     5581 ttataaagac aaaaaagagc tgaactcaaa acagcttgta ggctatgtgt cttatgacga
     5641 atttttaaaa catatagaag atatttaaat ttaagcggct ttaaaaagct gcttattttt
     5701 agtttatttt gaaacgatgc agttttttgt actattttta cctttataca atctttcatc
     5761 tgcttgtttt ataagtaaat ttctatcatt tccaacttca gatactccaa aagtaacact
     5821 aaaattaaat gtttcattac cttcttttat tatggtttcg ctaatttgaa attttatttt
     5881 ttgaattttg gttaaaaagt catttttact tatatcaaaa gatactatta caaattcctc
     5941 tccgccccat ctgcaaacta tatctgtttt gtttgtatga tctaaaaata tatttgagag
     6001 tgtttttaaa acaagatctc cggtattgtg tccaaactgg tcatttatct gtttaaagtt
     6061 atctatatcg cacatagaga ttaccatgct gcttcgtctt ttattgtcta ttattaaatt
     6121 taatgttctt ttatttataa gtccggttag atcatctgtt tcggacgcgt ttttaaattt
     6181 atcgttatcg tcttttaatt gataaaagta tgcgatatct gtagatttta atatcttaga
     6241 tatgataaga agcataacaa taagaaatat aaaatttgcc acataaaagt agtcttgata
     6301 atatgataca gactgctctc cttcatttga gatatgtacc aaatatagtg ctatatagat
     6361 aatagattct gataaaacca atatataaga tataagtcta tttctaaata tatcaatata
     6421 catgatagat attaaagcta tcaatataat ttgaaatcca tatccccatc caagtatcaa
     6481 aacacttatg ctagagctaa ataaaatttg tatatgagct ataaaaaatg ctttttcaag
     6541 ctcgttttta ccaaccgttt taatgcagaa aatatatgta aatacgccga ctatgctaac
     6601 gattgctaag tcgtacattt tcaaactaat aaaagatatg aagtaactta tgctggctac
     6661 taaaaacata attagtacgg ttcttaaatt tgttgataaa ttatcacttt ttatattcat
     6721 aatttttaaa taccagtcta ttttttcctt gactttttcc ataatacata agctcatcga
     6781 caatgctaat agccggttct agctcaaagt ctgcttcgat tttggtgaga tagagcgccc
     6841 caaatgttac gcttactttt attccttccg gatttaattt ttctactttt agtcttgctg
     6901 attctatgat gtcttttata tccgtagcat ttttattttc taaaattatt aaaaattcct
     6961 ctccgcccca tctgcaaagt ttgccgtatt ttataaagct gctttttaaa gaagctgcga
     7021 ctctgcttag tatagtatca ccaaaaatat gccccaacgt atcgtttata tttttaaaat
     7081 tatcaaggtc gcataggatt atacatatgg attttaactc ttcgtttttt agcatactta
     7141 aacgactagt tagcatctga cgcataggag ccctagtata aaatcctgtt aaaaagtcat
     7201 gttctgctat acgctgataa tcttttttct ttctttgtaa atttaagata tctaccgcgc
     7261 ctactatatt taaattttga tgtaaaaaga agaatacaaa tacgattgct aaaaatccag
     7321 atatatatga tatatgtttt aaatcatcat ttccgtagtt tatatcttga tgagcaaata
     7381 gatagtgtaa aacaagataa gttatggatt gtgctactac aattatgatt ttaaaataac
     7441 tattttttat agcagatgag tagtatatcg cgattagacc gactaaaaat agttcaaatc
     7501 catatcccca gcccatgact attatatcgc aaactatatt ataagtaccg cttagttgta
     7561 tccagatatt tatcagtgat tggtattttt cttcatataa ttcatcatag attattatgg
     7621 atatt
//
LOCUS       DAPPKW010000089         7453 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.089, whole genome shotgun sequence.
ACCESSION   DAPPKW010000089 DAPPKW010000000
VERSION     DAPPKW010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7453)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7453)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7453
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.089"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..281
                     /locus_tag="RPW04_001671"
     CDS             <1..281
                     /locus_tag="RPW04_001671"
                     /inference="COORDINATES: protein motif:HMM:NF021981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S26 family signal peptidase"
                     /protein_id="HDX6295755.1"
                     /translation="LKKVIAVAGDYVEIKDSKIFVNHKLIKDSQIFKFDSNHNVLPTL
                     SFSGVLKNNEIFVLGEHIKSFDSRYFGVLDIQKNSVKKAKEILTWSDK"
     gene            278..649
                     /locus_tag="RPW04_001672"
     CDS             278..649
                     /locus_tag="RPW04_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraM"
                     /protein_id="HDX6295756.1"
                     /translation="MKKDEMIKIIADKHKLILDENDPIFAVITANELLFDDFISKIDR
                     YFIKQKADLETYKTNILAELREYAQTTKDSLKDITIQEITTEHKEIIVDKNQLSNSKI
                     FLIVAVQIIFLLVGLIIGISI"
     gene            760..1446
                     /locus_tag="RPW04_001673"
     CDS             760..1446
                     /locus_tag="RPW04_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012000853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDX6295757.1"
                     /translation="MIISIINEKGGSGKTTLAVNLAARLAEDGDNTLLIDADPQRSTE
                     VFSDMRSQSGLIPLFSNVSKTGISLGDEIKRMRNNFDSIIIDTGGRDSKEMRKAILSS
                     DIIIIPTIPSQYDVNVLDHMLDIYSEVKDLNPNLIALVLVNRVSPNPFLVKELENLKD
                     YIKDAKNEKQLTNVEIFTSVIYERQAYRKAVIDGKSLKEFCKEDDKALTDFEEFYQEL
                     LKLAEIKLKG"
     gene            1450..1659
                     /locus_tag="RPW04_001674"
     CDS             1450..1659
                     /locus_tag="RPW04_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012000859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295758.1"
                     /translation="MGFKKMRTKEDEFVNSARGETSAQNEEINTKRNKQFIVYFTDEE
                     LKNLKNTAKSIGMPTSTYIRFKLFS"
     gene            complement(1739..3301)
                     /locus_tag="RPW04_001675"
     CDS             complement(1739..3301)
                     /locus_tag="RPW04_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002804092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HDX6295759.1"
                     /translation="MIIKKIIFKRQNKSSFKNLSNYILDEDNNHAKVLADYVLDTKND
                     MDKVEAYHFTNCSFDNNKDNIKEIITTQQLNTTTKQDKTMHLVVSFKEDERPDIKTLY
                     AIEDEIAEALGMKDHQRLSSVHSNTNNLHIHIAINKINPNTLKVINPYNDVKILQELA
                     IKLEKKYNLQIDNHISSNNVKENKYNKHTMTCNFETWVKEKIANTIDTMLRDEKTTFD
                     DLKVFLAKYDLEFRERRKGFVISSKTEKLFCKASSIHRNLSKQSLEKRYCQLDLSALK
                     ENLQEISAIEKYNKFNGMPPNPLYQNYLNYEKQKLELREKELRMLKLKRNEFKNSISS
                     MKFNNLTINHIKNQKTIFKNKTKEIYQRYKKISYRQFLINEAYSGNEEAIKALQNKEV
                     KIIQNSDNAFRGNVKNCVFDKPDYITKEGYFVYQRDAQKIIDKNDHIKVVCSKKDDIV
                     LLEALKLAMKKYDNITITGNSEFKNRVINLVVKHDLNVKFEDKLLNQMVRKLRSKNIK
                     IEKNIDQNLTNF"
     gene            complement(3276..3644)
                     /locus_tag="RPW04_001676"
     CDS             complement(3276..3644)
                     /locus_tag="RPW04_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002838516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA transfer protein"
                     /protein_id="HDX6295760.1"
                     /translation="MNKTKQINIRLSQSEYEYIMQKAKGHGLTISRYLRDLAMNYPVI
                     CIVDQKAAIDMLKIAGDLGRLGGLFKHWLVGNEESKPNFSGKRTYKDIDEIVDEILNL
                     QILLKEQAKKLMNDNKEDNI"
     gene            3859..4074
                     /locus_tag="RPW04_001677"
     CDS             3859..4074
                     /locus_tag="RPW04_001677"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295761.1"
                     /translation="MQVLINIENANKNIINALIAVLKTQPELKFEIKETKKSWSDECK
                     ELIEDYKANKIKSYKDPKKMHQDILNG"
     gene            4067..4342
                     /locus_tag="RPW04_001678"
     CDS             4067..4342
                     /locus_tag="RPW04_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002782140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system YafQ family
                     toxin"
                     /protein_id="HDX6295762.1"
                     /translation="MAKYEIIYSKSYKKAIKKIDKSLLPEIEYVLNKLANDEILEVKF
                     KDHQLKGEYKDFRECHIKPDLLLVYKKDKDLLILIAFKLGSHSEIFK"
     gene            4339..4689
                     /locus_tag="RPW04_001679"
     CDS             4339..4689
                     /locus_tag="RPW04_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002783722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295763.1"
                     /translation="MKKGEAKIEFFSNLEYLKKEFKSGLVVSKFLYNKAKTSKNLKMS
                     YKQFNKYFNETFKDTHNQSKIALKSKNNLKEYQSSTKDKKLKNEPLKLKIQTNSKNVF
                     NAKFGKKFNDDDIL"
     gene            4673..5506
                     /locus_tag="RPW04_001680"
     CDS             4673..5506
                     /locus_tag="RPW04_001680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295764.1"
                     /translation="MMIFYKLYESIAKLNKNIKKSLETNQIYEKIINLPFEKINKCKL
                     NLDCFNSDNVSFFIKPKNCYNRKQRTILEDIIQIEESNNIIELDLKRINSISSSKSKS
                     SGYKYKDIYEFGKNVFVERNKKWSLEECIKHTENGLGNKEKIYEIRYYKWNNRHEWLN
                     SDGSHHFAVANYIITNKNINYKIKCQITTYSIKEELKTIIDNYCMFLINDKLQYHLYE
                     LFLNTDINIILLESNNCLILIKKNETYKNLIQLMKIIDNKYIFYLNDYLNEKCDFQYK
                     H"
     gene            5836..5991
                     /locus_tag="RPW04_001681"
     CDS             5836..5991
                     /locus_tag="RPW04_001681"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295765.1"
                     /translation="MLSNNDNIAVQMEFIFSSWLENFSSWLEKNSSILEKFHQILKNI
                     AIHKLNI"
     gene            6118..6936
                     /locus_tag="RPW04_001682"
     CDS             6118..6936
                     /locus_tag="RPW04_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002784928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295766.1"
                     /translation="MVNLTDIEKTSQKLYNKVEEKVDNVTGEVITTVNSFLQKVNTKD
                     DFIKLFTENISFLVSDLSGSALKVLLLIMRNINYQNIFQYNSEFVNYFESKKILGKSS
                     VYNAMNELEKKNVILKITKEQREEFGVLGAKSFIINPNIIGKGSFRDLKELRQTITRT
                     FDFDKLEMKQETQVEAKYKGIDEILNNPENYNIIEASQINNKNLIHNMIVVEEKQEKV
                     NEQLSLFDENQKEQNARLFVEKFGGMFSGAFHPTKSAKEMKRELLDQDLKESKI"
     gene            6933..7343
                     /locus_tag="RPW04_001683"
     CDS             6933..7343
                     /locus_tag="RPW04_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002841954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HDX6295767.1"
                     /translation="MKKVFLDTNILIDFFEETRYNNLQAKQLIYFLLSNDIKIIFSED
                     MISTIAYILKKENLDKFTYFLKSIALEKEFEIVSFGVSVINMACDYYNNNKGDFEDYL
                     QYFTAEKENCIAIYTMDKEFPQLKIPVKRYGDFA"
BASE COUNT         2999 a          843 c          927 g         2684 t
ORIGIN      
        1 ttctaaaaaa agtaattgct gttgctggag actatgtaga gattaaagat tctaaaatat
       61 ttgtcaatca caaacttata aaagatagcc aaatatttaa attcgatagt aatcataatg
      121 ttttaccaac tttatctttt agtggagttc taaaaaataa tgaaattttt gttttaggag
      181 agcatattaa gagttttgat agcagatatt ttggagtatt agatattcaa aaaaacagtg
      241 taaaaaaagc aaaagaaata ctgacttgga gtgataaatg aaaaaagatg agatgataaa
      301 aatcattgca gataagcata aacttatcct tgacgagaat gatcctatat ttgcagttat
      361 aactgctaac gagctattat ttgatgactt tatatcaaag atagatagat attttattaa
      421 acaaaaggct gatttagaaa cctataaaac aaatatctta gcagagttaa gagaatatgc
      481 acaaacaacc aaagacagct taaaagatat aactatacaa gaaattacaa ctgagcataa
      541 agagattatt gtagataaaa atcagctatc aaatagtaaa atatttctta ttgtagcagt
      601 tcaaattata ttccttttag tcggacttat tataggaatt agtatctaac taaataatat
      661 ttatataata gtatttagct attaaaaaac tatgttttta atattaaatt aatattttta
      721 agatataatt tctttaaatt taattttaaa ggttgttgta tgattatttc aataatcaat
      781 gaaaaaggtg gaagtggaaa aactactcta gcagtaaatt tagctgctag gcttgctgaa
      841 gatggtgata atactctctt aatcgacgca gatccgcaac gctctactga ggtgttttca
      901 gatatgagaa gtcaatcagg actaattcca cttttttcta acgtatcaaa aacaggtata
      961 agcttaggtg atgagatcaa aagaatgcgg aataattttg atagcattat cattgataca
     1021 ggtggtcgag attctaaaga aatgcgtaaa gctatattat catctgatat tataataatt
     1081 ccaacgattc ctagtcagta tgatgtaaat gtattagacc acatgctaga tatttatagt
     1141 gaagttaaag atctaaatcc aaatttaatt gctttagttt tagttaatcg tgtatcacca
     1201 aatccatttt tagttaaaga gttagaaaat ttaaaagact atataaaaga tgccaaaaat
     1261 gaaaaacaat taacaaatgt agagatattc acctctgtta tctatgaaag acaagcttat
     1321 agaaaagcag ttatcgatgg aaaaagtttg aaagaattct gcaaagaaga cgacaaagca
     1381 ctaactgact ttgaagaatt ttatcaagaa ttgttaaaat tagctgaaat aaaattaaaa
     1441 ggataagaaa tgggatttaa aaaaatgaga acaaaagaag atgaatttgt taattctgct
     1501 cgaggtgaaa caagtgcgca aaatgaagaa attaatacta aacgaaataa acaatttata
     1561 gtttatttta ctgatgaaga attgaaaaat ttaaagaata ctgcaaagtc tataggaatg
     1621 ccaacaagca catatattag atttaaattg ttttcataaa ttatattaat atgaataaac
     1681 tattatttaa atagtatata gctataaaaa taatagttta aaactatttt cattcttttt
     1741 aaaaatttgt taaattttga tcaatatttt tttctatttt aatattttta cttcttaatt
     1801 ttctaaccat ttgattaagc aatttatctt caaattttac atttaaatca tgctttacaa
     1861 ctaaattaat aactctattt ttaaactccg aatttccagt tattgttata ttgtcatatt
     1921 ttttcattgc cagttttaat gcctctagta aaacgatatc atcttttttg ctacaaacaa
     1981 cctttatatg atcattttta tctataatct tttgggcatc tctttgatat acaaaatatc
     2041 cctcttttgt aatataatct ggtttatcaa aaacgcaatt tttaacattg cctctaaaag
     2101 cattgtcgct attttgaata attttaactt ctttattttg taaagctttt atggcttctt
     2161 catttccact atatgcttca ttaattaaaa attgtctata tgatattttt ttatatcttt
     2221 gataaatttc tttagtttta tttttaaata tagtcttttg atttttaata tggttgatag
     2281 ttaagttatt aaatttcata gatgaaatag aattcttaaa ttcgtttctt tttaatttaa
     2341 gcattctaag ctctttttct cttagctcta gcttttgttt ttcatagttt aaataatttt
     2401 gatataaagg atttggtggc ataccattga atttattata tttttcaatt gcgcttatct
     2461 cctgtaaatt ttcttttaaa gcagataaat ctaattgaca atatcttttt tcaagagatt
     2521 gttttgataa atttctatga atgctacttg ccttacaaaa taatttttca gtttttgaag
     2581 aaataacaaa gccttttctt ctctctctaa attctaaatc gtatttagcc aaaaatactt
     2641 ttaaatcatc aaatgttgtt ttttcatctc ttagcatggt atctattgta tttgcaatct
     2701 tctcttttac ccaagtttca aaattgcaag tcatagtatg tttattatat ttattttctt
     2761 tcacattatt acttgaaata tgattatcta tctgcaagtt atatttcttt tcaagcttta
     2821 ttgctaattc ttgaagaatt ttaacatcat tataaggatt tatgacttta agagtatttg
     2881 gattaatttt attaattgct atatgaatat gcaagttatt tgtatttgaa tgcactgaac
     2941 taagtctttg atggtctttc atacctaaag cttccgcaat ttcatcttca atagcatata
     3001 aagtttttat atcagggcgt tcatcttctt taaaagacac aactaagtgc attgttttat
     3061 cttgttttgt agtagtattc aattgctgag tagtaattat ctcttttata ttatctttat
     3121 tattatcaaa agaacaattt gtaaaatggt atgcttcaac cttatccata tcattttttg
     3181 tatctaaaac ataatcagct aaaacttttg cgtgattatt atcttcatca agaatatagt
     3241 ttgacaaatt tttaaaactg gatttgtttt ggcgtttaaa tattatcttc tttattatca
     3301 ttcatcaact ttttagcttg ttcttttaaa agtatttgta aatttaaaat ttcatcaact
     3361 atttcatcaa tatctttata agttcgtttg cctgaaaaat ttggcttact ttcttcattg
     3421 ccaaccaacc aatgtttaaa aagtcctcca agtcttccta gatctccagc aatttttagc
     3481 atatcaatag cagctttttg atcaactata caaataactg gataattcat agctaaatct
     3541 ctaagatatc ttgaaattgt taacccatgc cctttggctt tttgcattat atattcatat
     3601 tcactttgag ataatctaat attaatttgt tttgttttat tcattttggt gttaatcctt
     3661 ttttagagct ttagcgataa aactttgtat ttgtatagta aatacatatc ctgccttttt
     3721 actccagaga attatagcag attattggtg attataagtt aaatttgctt aattaccaat
     3781 aataacttat aattactcat tttatatatt tttcaccaaa aaaaagatat aatttaaaaa
     3841 actgtaaaag gatcacaaat gcaagtttta ataaacattg aaaatgccaa taaaaatata
     3901 ataaatgctt taatagctgt tttaaaaact caaccagaat taaaatttga aataaaagaa
     3961 acaaaaaaaa gctggagtga tgagtgtaaa gagcttatag aagactataa agcaaataaa
     4021 ataaaatcat acaaagatcc taaaaaaatg caccaggata ttttaaatgg ctaaatatga
     4081 aataatctat tcaaaaagtt ataaaaaagc gattaagaag atagataaat cacttttgcc
     4141 agaaattgaa tatgttctta ataaattagc aaatgatgaa atcttagaag taaaatttaa
     4201 agatcatcag ctaaaaggag aatataaaga ttttagagaa tgccatatta agcctgattt
     4261 attattagtc tataaaaaag acaaagattt attaatacta attgctttta aactaggttc
     4321 tcatagtgag atttttaaat gaaaaaaggt gaagctaaaa ttgaattttt ttcaaattta
     4381 gaatatttaa aaaaagaatt taaatcaggt ttggtagttt caaaatttct ctataataaa
     4441 gcaaaaacta gtaaaaatct aaaaatgtcc tataaacaat tcaataaata ttttaacgaa
     4501 acatttaaag acactcataa tcaatcaaaa atagctctaa aaagcaaaaa caatttaaaa
     4561 gaataccaaa gtagcaccaa agataaaaaa cttaaaaatg agcctttaaa attaaaaatt
     4621 caaacaaatt ctaaaaatgt ctttaatgct aaatttggaa aaaagtttaa tgatgatgat
     4681 attttataag ttatatgaat cgatagcaaa attaaacaaa aatataaaaa aatcattaga
     4741 aacaaatcaa atttatgaaa aaataataaa tctacctttt gaaaaaataa ataaatgcaa
     4801 attaaattta gattgcttta atagcgataa tgtttcattt tttataaagc caaaaaattg
     4861 ctataacaga aaacaaagaa caatattgga agatataata caaattgaag aatcaaataa
     4921 tattattgag ttagatctaa aaagaataaa ttcaatatct tcttctaaat ccaaatcatc
     4981 tggatataaa tataaagata tatatgaatt tggtaaaaat gtatttgtag aaagaaataa
     5041 aaaatggagc ttagaggagt gcataaagca tacagaaaat ggattaggaa ataaagaaaa
     5101 aatatatgaa ataagatatt ataaatggaa taatagacat gaatggttaa actctgatgg
     5161 atctcatcat tttgcagtag ctaactacat aattacaaat aaaaatatta actataaaat
     5221 taaatgtcaa ataacaactt actcaataaa agaagaatta aaaacaataa ttgataatta
     5281 ttgcatgttt ttaataaatg ataaattaca atatcattta tatgaactat ttttaaatac
     5341 ggatattaac ataattttac ttgaatcaaa taattgtcta attttaatta aaaaaaatga
     5401 aacttataaa aatttaattc aattaatgaa aatcatagat aacaaatata tattttattt
     5461 aaacgattac ttaaatgaaa agtgtgattt tcaatacaaa cattaaaaaa tagtgatttt
     5521 aagctctttt aaaaataatt aaaacactaa atttaagttt cagaaactta aagcaatatt
     5581 tttgacttaa gttttgtcat aaaattaatg aaatttagta taaaacttaa atatatttat
     5641 tttatttttt ggcgtttttc gttttgctgg agcgaagcga caatagcaaa acaaataaaa
     5701 gttcaaaagt aaatgagatg aaagcttaat tttttattaa attattctca tttacttttg
     5761 atttacctat taaatttttt caaaaatggt tttttaaatt caagaataga ataagaagga
     5821 aataagcttc aaaaaatgct ttctaataac gataatatcg cagttcaaat ggaatttata
     5881 ttttccagct ggttggaaaa tttttccagc tggttggaaa aaaactctag tatattggaa
     5941 aaatttcatc aaattttaaa aaatatagct atccataaat taaatatata gtaaatattc
     6001 caaaattatt tggaatattt acataaaaat tttaactaat tttccaaaaa atatggagaa
     6061 attagttaat tttatgatat aatttctcca tattttttgg aaaggtaaaa tatggaaatt
     6121 gtaaacttga ctgatattga aaaaacatct caaaaacttt ataataaagt tgaagaaaag
     6181 gtagacaatg ttacaggtga agttatcact actgttaatt cttttttgca aaaagtaaat
     6241 actaaggatg atttcataaa acttttcact gaaaatatat cttttttagt ttcagactta
     6301 tcgggatctg ccttaaaagt cttgttactt attatgcgta atatcaacta tcaaaatata
     6361 tttcaatata atagcgaatt tgttaattat tttgaaagta aaaaaattct tggaaaatct
     6421 agtgtttata atgcaatgaa tgaacttgaa aagaaaaatg ttattttgaa aatcacaaaa
     6481 gaacaaagag aagaatttgg agtattagga gcaaagtcat ttataataaa tccaaatatt
     6541 ataggaaaag gctcatttag agatttgaaa gagctaagac aaactattac tagaactttt
     6601 gattttgaca aacttgaaat gaaacaagaa acacaagtag aagctaaata taaaggtata
     6661 gatgaaatat tgaataatcc tgaaaattat aatattattg aagcttctca aattaataat
     6721 aaaaatttaa tccacaacat gatagtagtc gaagaaaagc aagaaaaagt taatgaacaa
     6781 ctatctttat ttgatgaaaa tcaaaaagag caaaacgcta gattatttgt agaaaaattt
     6841 ggcggaatgt ttagtggtgc atttcatccc acaaaatctg caaaagaaat gaaaagagaa
     6901 ttattagatc aagatttaaa agaaagtaag atatgaaaaa agttttttta gacacaaaca
     6961 ttttgattga tttcttcgaa gaaacaagat acaataactt acaagctaaa caattaatct
     7021 attttttgct ttcaaatgat ataaaaataa ttttttctga agatatgatt tctacgattg
     7081 cctatattct taaaaaagaa aatttagata aatttactta ttttttaaaa agtattgcac
     7141 tagaaaaaga atttgaaatc gtttcttttg gtgtaagtgt tataaatatg gcttgtgatt
     7201 attataataa caacaaagga gactttgaag attatttgca gtattttact gccgaaaaag
     7261 aaaattgtat agctatttac acaatggata aagaatttcc acagcttaag attccggtaa
     7321 aaaggtatgg tgatttcgca taattttaag aaaatgtgcc atataatagg ttgcatttct
     7381 ttaaatattc tataataatg aaacatctaa actagcaacc tactcaaaaa ctaaaattat
     7441 ttaataattt gat
//
LOCUS       DAPPKW010000090         7260 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.090, whole genome shotgun sequence.
ACCESSION   DAPPKW010000090 DAPPKW010000000
VERSION     DAPPKW010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7260
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.090"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            83..721
                     /locus_tag="RPW04_001684"
     CDS             83..721
                     /locus_tag="RPW04_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS607-like element ISCfe1 family transposase"
                     /protein_id="HDX6295768.1"
                     /translation="MSKLLSIGQASKALGVTIQTLRNWDKKGLLKPDELTRGGERRYK
                     LETLKNINKNIVFKNDNLKTIAYARVSSNDQKDDLIRQVQVLELYCSKQGFNYEIIQD
                     LGSGMNYYKKGLTRLLNLILDGEVKRLVLTHKDRLLRFGAELVFAICEAKEVEVIIIN
                     KGEENVKFEEELAKDVLEIITVFSARLYGSRSKKNKKLIDEMKEVVNNNVKN"
     gene            708..2000
                     /locus_tag="RPW04_001685"
     CDS             708..2000
                     /locus_tag="RPW04_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001274343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDX6295769.1"
                     /translation="MSKTNQSNLISISHKIELKPNNKAITHFKKAFGCSRLAYNWGLA
                     KWQEYYKQGVKKSYLDLKKEFNAIKKEQFPFVYDVSKYATQQPFLNLNLAFNKFFRDL
                     KQGKLSYPKFKKKKENFGSYYIGGDQIIIKNEKYLKIPNFGLVKIREKLRFNGKINSV
                     TISQKANKFYASFSMQISHDEYNKTHKIKNLNNQSIGIDLGIKEFVCLSNGLMIKAPK
                     PLNKLTRLLVKRQRRLSKKQHAKTKQEAINGVKKSNNYLKESKKLAKLHSKIANIRSD
                     FLHKLSSIIIKNYDYIGLENLNTQGMMKNHKLAKSLVDVSFYEFNRQLEYKANYMQKE
                     IHRVDKFYPSSKTCCVCGNIKQDLTLKDRIYKCKSCGNIIDRDLNASINLHKFVNETV
                     GIVNSEFTPMDLTALLDDLAINQIVTSKVEVGIQQKFY"
     gene            1996..3444
                     /locus_tag="RPW04_001686"
     CDS             1996..3444
                     /locus_tag="RPW04_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toprim domain-containing protein"
                     /protein_id="HDX6295770.1"
                     /translation="MSIVLYIFIEFYRFVVTVKILKDKPTEIFRATADATKIVSFINE
                     LNIEKNQIKNVEKQIEINTDLEVNMATKKTYLYVPFTQKDEAKKVGAKWDKESKMWYA
                     PKGVDLNKFKKWQTSQEQTTDNINVMDEFKTALTNAGLNIDGDPIMDGKLHRVSVYGD
                     RGNEKSGAYVGYLNGHPAGYIQNYKTGIKENWKSSVSNNNAKNQEIEFKNAIETNKAI
                     KESREAKLSAAYEKTAKKLQDEYENAKWANKEHRYLKSKGFDKNFYLKQDEHGNLLIP
                     LRDINGKHWATQRIFSNGDKMIGATRTKEEKEQGIEYPAKKQGNFFLLGAKNLDNVKE
                     VYVCEGFATAASVYEATKTPSIMGVDAGNLEIVITNIQKKYPKMEIIIAADNDIKKEL
                     DNGTNVGKNTALGIQKKYPEIKVALPKFTKEEIQKGYSDFNDLAKSRGLEEIKKQLKE
                     QVAKQLSVEKATTNVKQIKKDLSVKKDFSLSM"
     gene            3454..5295
                     /locus_tag="RPW04_001687"
     CDS             3454..5295
                     /locus_tag="RPW04_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002824096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HDX6295771.1"
                     /translation="MKKDTNQTLVYILAISGIVISFIVLSSFATQYLARSFNYSKDLG
                     EPLFYGLYNPFNWIFWSLNYQPYYPDFFTKFLMIMQIVVAAPFLVFIIIKLAFLRKAK
                     AIKDLHGSAHWATIEEVKESGVFNKEKGVYIGGFQHEKMLYYLRHDGPEHVMVFAPTR
                     SGKGVSLLLPTLLSWEESALIFDIKAELWSLTAGWRQKYAKNKVLKLDPTCLDDSAVK
                     FNILEEIRIGTLHEIKDAQNIAINLIFKGETPPTNPAQGSTAYFKSEGGNFLVSIILY
                     ALHLKKYQSESTPNLTDIYKFINDPNRSIDELLEEMVECDISTMDKNTQEIIQSISRS
                     MKNKAAQELSGVIGTASDTLNLYIDPILAKNTAKSDFKIKDLMNHDSPISLYLIIPPG
                     QKNRLRPFFNLLVNQIFRTLTDDSLKFENGENIKSYKHKMLVLADELTIFGKLGVLEE
                     NLAYMAGYGMKFYGSIQDIQQLYSIYGEKETIISNCHVRIAFAPNKVETAKLLSEMSG
                     ITTIIKKSLTSSGKRTAIMLGNVSETLQEVQRPLITADECMRLPSAKKDKDDKIIAPG
                     DMLIFIAGQSPIYGKQILYFKDDVFSARSKVPLKPNISDKLNQRKKT"
     gene            5292..5999
                     /locus_tag="RPW04_001688"
     CDS             5292..5999
                     /locus_tag="RPW04_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002814348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraL"
                     /protein_id="HDX6295772.1"
                     /translation="MTNIHFILNGKGGIGKSFISSLICQYLLFKSQTITAIDTDPNNT
                     TLFNIKAIKAKFLQLIDEDGKFDNRAFDKIIELAADKKTNNYIVDSGATTFIPLIDYL
                     KENEAIEILKANEIDVYMHIPIVGGQSKDDTILGLRQLVEAFDCSFIVWINEYHGAIK
                     DFEENPEYIAIKDKIKAIIYLNAVNKDTFGKDLLELTSKNLTFDEAMNDKSFSLMSKQ
                     RLKIFKDKAFKQLEIII"
     gene            6116..6352
                     /locus_tag="RPW04_001689"
     CDS             6116..6352
                     /locus_tag="RPW04_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002823869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295773.1"
                     /translation="MTYPEVHSLEESLAILKKYKDDLTKEQYDGIKSIICGHAIEDMF
                     ANERDIIDMIKIAKNEANADEIIAEYKKEWGVND"
     gene            6345..7031
                     /locus_tag="RPW04_001690"
     CDS             6345..7031
                     /locus_tag="RPW04_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002779836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HDX6295774.1"
                     /translation="MIDKVLKFLDDGIPKNDFDRQLLASNLVGATNLIELNKREREIT
                     LKKQLKLQLNPIKGNFDYQHLKDIHKALFKDVYTWAGKDRMEVGLHGNFGKYAPNGTI
                     TNFVPGKDLNATAQQIFTWLKEDNYLTNSKDLNDFAKNLAEFARNLNALHPFREGNGR
                     TQRIFLNELAKNAGYKLDLNLIPKDKMIMASVEASQLKLGKLEAIIKTNLKSFKQNLE
                     KENTLGLSLC"
BASE COUNT         3067 a          888 c         1142 g         2163 t
ORIGIN      
        1 attctataaa attagataaa ataatataaa tattttatat aattaacttg acataaaaat
       61 ccaaatttaa tataattagc ctatgagtaa attattatca ataggacaag cttcaaaagc
      121 tcttggggtt actattcaaa cacttagaaa ctgggataaa aaaggattat taaaacctga
      181 tgaattaact cgtggtggag agcgtagata taaattagaa actttaaaaa atataaataa
      241 aaatatagtt tttaaaaatg ataatttaaa aaccatagct tatgcaagag ttagttcaaa
      301 tgaccaaaaa gatgatttaa ttagacaagt tcaagtatta gagttatatt gttctaaaca
      361 aggctttaat tatgaaataa tacaagactt aggtagtgga atgaattatt ataaaaaagg
      421 cttaactaga ctattaaatt taatactaga tggagaagtt aaaagacttg ttttaactca
      481 taaagataga ttattaagat ttggagctga attagtattt gcaatatgtg aagctaaaga
      541 agttgaagta ataattatta ataaaggcga agagaatgtt aaatttgaag aagagttagc
      601 caaagatgtc ttagaaataa taacagtttt ttcagctagg ctttatggaa gtagaagtaa
      661 aaagaataaa aagctaatag atgagatgaa agaagtagta aataataatg tcaaaaacta
      721 atcaatcaaa tttaatatca atttctcata aaatagaatt aaaaccaaac aataaagcaa
      781 tcactcattt taaaaaagct tttggctgtt ctcgtttagc ttataactgg ggacttgcta
      841 aatggcaaga gtattataag caaggtgtta aaaaatcata tttagattta aaaaaagaat
      901 tcaacgctat taaaaaagag cagtttccat ttgtttatga tgttagtaaa tatgcaactc
      961 aacaaccatt tttaaattta aatctagctt ttaataaatt ttttagagat ttaaaacaag
     1021 gcaagttaag ttatccaaaa tttaaaaaga aaaaagaaaa tttcggtagt tactatatag
     1081 gcggagacca aattataatt aaaaatgaaa aatatctaaa aattccaaat tttggacttg
     1141 taaaaataag agaaaagctt agatttaatg gtaaaataaa tagcgtaaca atctcacaaa
     1201 aagctaataa attttatgcc agttttagta tgcaaatatc tcacgatgaa tataataaaa
     1261 ctcataaaat taaaaatcta aataatcaaa gcataggtat agatttaggt ataaaagagt
     1321 ttgtttgttt atctaatggc ttaatgataa aagcaccaaa gcccttaaat aagctaacaa
     1381 gacttttagt taaaagacaa agaaggcttt ctaaaaagca acacgcaaaa accaagcaag
     1441 aagcaattaa tggagttaaa aagtcaaata attatctaaa agaatctaaa aaattagcta
     1501 aacttcactc taaaatagca aatattagaa gtgatttttt acataagctt tctagtataa
     1561 taattaaaaa ttatgattat ataggactag aaaatttaaa cacacaaggg atgatgaaaa
     1621 atcataaatt agctaaatct cttgttgatg tcagttttta tgagtttaat agacaattag
     1681 aatataaagc taattatatg caaaaagaaa ttcatagagt agataaattt tatccaagtt
     1741 ctaaaacttg ctgtgtatgt ggaaacataa agcaggattt aacattaaaa gatagaattt
     1801 ataagtgcaa atcttgtgga aatattattg atagagattt aaatgcaagt attaatttac
     1861 acaagtttgt aaatgaaaca gtaggaatag ttaattccga atttacgcct atggacttga
     1921 cggctctgct agatgattta gcaataaatc aaatagtaac cagcaaggtt gaagtaggaa
     1981 tacaacaaaa attctattag tatagtttta tatatattta tagaatttta taggtttgta
     2041 gtaacggtta aaattctaaa agataaacca accgagattt ttagagcgac tgcagacgct
     2101 acaaagatag tgagctttat taatgaatta aatattgaaa aaaatcaaat taaaaatgta
     2161 gaaaaacaaa ttgaaataaa cacggatttg gaggtaaata tggctactaa aaaaacatat
     2221 ttatatgttc cttttacgca aaaagatgaa gctaaaaagg ttggtgcaaa atgggataaa
     2281 gaatctaaaa tgtggtatgc tccaaaaggc gtagatttaa ataaatttaa aaaatggcaa
     2341 acatctcaag aacaaactac tgataatata aatgttatgg atgaatttaa aacagcatta
     2401 actaatgctg gattaaatat tgatggcgat cctataatgg acggcaaatt acacagagta
     2461 agcgtatatg gagacagagg aaatgagaaa agtggagctt atgtaggata tttaaacgga
     2521 caccctgctg gttatataca aaactacaaa acaggaatta aagaaaactg gaaaagctcc
     2581 gtatcaaata ataatgcaaa aaatcaagag atagaattta aaaatgctat tgaaacaaac
     2641 aaagcaataa aagaatcaag agaagctaaa ttatcagcag cttatgagaa gacagctaaa
     2701 aagcttcaag atgaatatga gaatgcaaaa tgggccaaca aagaacaccg ttatttaaaa
     2761 agcaaaggtt ttgataaaaa tttctatcta aaacaagacg aacacggcaa tttacttatt
     2821 ccattaagag acattaatgg aaaacattgg gcgacacaga gaattttttc aaatggcgat
     2881 aaaatgatag gggcgactag aacaaaagaa gaaaaagaac aagggataga atacccagct
     2941 aaaaaacagg gtaatttttt cttacttggt gcaaaaaatc ttgataatgt aaaagaagta
     3001 tatgtgtgtg agggctttgc aactgctgct agtgtatatg aagctactaa aacacctagc
     3061 ataatgggag ttgatgctgg aaatttagaa atagtaatta ctaatataca aaaaaaatat
     3121 cctaaaatgg aaattatcat cgctgctgat aatgatataa aaaaggaact agataacgga
     3181 acaaatgttg gaaaaaatac agctcttggg atacaaaaga aatatccaga aattaaagta
     3241 gctctaccta aattcacaaa agaagaaatc caaaaaggct atagtgattt taatgattta
     3301 gcaaaaagta gaggacttga agagattaaa aaacaactta aagagcaagt agcaaaacaa
     3361 ctttcagtag aaaaggcaac tactaatgtt aaacagataa aaaaagattt atctgttaag
     3421 aaagacttta gtctatccat gtaaggcaaa tacatgaaaa aagacacaaa tcagactcta
     3481 gtctatatac ttgcaattag cggtattgtt atttcgttta tagtacttag ctcatttgcc
     3541 acacaatact tagctaggtc ttttaattat tcaaaagatt taggagaacc gctattttat
     3601 ggtctatata atcctttcaa ttggattttt tggagtttga actatcaacc ttattatcct
     3661 gattttttta ccaaatttct tatgataatg cagatagttg tagcagcccc atttttagta
     3721 tttattataa tcaaactagc atttctaaga aaagcaaaag caataaaaga cttgcatgga
     3781 tctgctcatt gggcaactat agaagaagtt aaagaaagtg gtgtatttaa taaagaaaaa
     3841 ggagtgtata taggcggttt tcaacatgaa aaaatgcttt attatttaag acatgacggt
     3901 ccagagcatg taatggtttt tgcaccaaca agaagtggta aaggcgtgag cctactttta
     3961 cctacacttt tatcttggga agaatctgca cttatttttg atattaaagc tgaactttgg
     4021 tctttgactg ctggttggcg acaaaaatac gccaaaaata aagtactaaa attagatcca
     4081 acttgtttag atgatagtgc tgtaaaattt aatattttag aagagataag aataggaacg
     4141 ctgcacgaga tcaaagacgc tcaaaatatt gcaatcaatc tcatttttaa aggtgaaacg
     4201 ccacctacta atcctgctca aggtagcacg gcttatttta aaagcgaggg tggaaatttc
     4261 ttagtttcaa ttatacttta tgctttgcat ttaaaaaaat atcaaagtga gagcaccccg
     4321 aacctaaccg atatttataa atttattaat gatccaaatc gaagtatcga tgaattatta
     4381 gaagaaatgg ttgaatgcga tatttccaca atggataaaa atacacaaga aattatacaa
     4441 agcatatcaa gatcaatgaa aaataaagcc gcacaagaat taagtggtgt aataggaaca
     4501 gcttcagaca ctttaaatct ttatattgat cctatcttag caaagaatac agcaaaaagc
     4561 gattttaaaa tcaaagatct aatgaatcat gatagtccta ttagtcttta tttgattatt
     4621 ccaccagggc aaaaaaatag gttgcgtcct ttttttaatt tgcttgttaa tcaaattttt
     4681 agaactttaa cagacgattc tctaaaattt gaaaatggag aaaatataaa gagttacaaa
     4741 cataaaatgc tagtgttagc cgatgagcta actatatttg gaaaattagg agtgcttgaa
     4801 gaaaatcttg cctatatggc aggatatgga atgaagtttt acggatctat tcaagatata
     4861 caacaacttt attctattta tggtgaaaaa gaaacaatta tttcaaattg ccacgtaaga
     4921 atagcatttg caccaaacaa agtagaaaca gcaaagctat tatcagaaat gagcggaatt
     4981 acaaccatta ttaaaaaatc gcttacgagc tctggaaaaa gaaccgcaat aatgcttggc
     5041 aatgtaagcg aaaccttaca agaagtacaa cgcccattaa ttacagctga tgaatgtatg
     5101 agattgcctt ctgctaaaaa agataaagat gacaaaataa ttgctcctgg cgatatgctg
     5161 atttttattg caggacaatc acctatttat ggcaagcaaa tcttatattt taaagacgat
     5221 gtattctcgg caagatcgaa agtgccatta aaaccaaata taagcgataa attaaatcaa
     5281 aggaaaaaga catgactaat attcatttta tacttaacgg aaaaggcgga ataggaaaaa
     5341 gtttcatttc atcattaatt tgccagtatt tgttatttaa atcccaaaca attactgcaa
     5401 tagatacaga tccaaataat acaactttgt ttaatataaa agctataaaa gctaaatttt
     5461 tacaattaat agatgaagat ggcaaatttg ataatagagc atttgacaaa attatagaac
     5521 tagcagcaga taaaaaaacg aataactata tagtagatag tggtgcgact acttttattc
     5581 cgttaattga ttatctaaaa gaaaatgaag caattgaaat tttaaaagca aatgaaattg
     5641 atgtatatat gcacattcct attgttggtg gtcaatcaaa agatgatacc atattagggc
     5701 ttagacaatt agtagaagct tttgattgta gttttattgt ttggattaac gaatatcatg
     5761 gagctatcaa ggactttgaa gaaaatccag aatatatagc tattaaagat aaaataaaag
     5821 caattatata tttaaatgca gtaaataaag acacatttgg caaagatttg ctagaattaa
     5881 caagtaagaa tttaacattt gatgaagcta tgaatgataa aagcttttct ctaatgtcaa
     5941 aacaaagact aaaaattttt aaagacaaag cctttaagca gcttgaaata ataatctaaa
     6001 atgaattatc taaataatag ttatttaata gtgtttaact atcaaataac tattttatta
     6061 atattttatt attattattt aactataata caaaaatatc ttaaaaggag aaaaaatgac
     6121 atatccagaa gtacatagcc tagaagagag tttagcaata cttaaaaaat acaaagatga
     6181 tttaactaaa gagcaatacg atggaattaa atctataatt tgcggacacg ctattgaaga
     6241 tatgtttgca aatgaaagag acattattga tatgataaaa attgcaaaaa atgaagcaaa
     6301 tgccgatgaa ataatcgccg aatataaaaa agagtgggga gtaaatgatt gataaagttt
     6361 tgaaattttt agatgatggt attcctaaaa atgattttga cagacaactt ttagcttcta
     6421 atttagtagg cgcaacaaat ttaatagagt taaataaacg agaaagagaa attacattaa
     6481 aaaaacaatt aaaactacaa cttaatccaa ttaaaggcaa ttttgactac caacatttaa
     6541 aagatataca taaagcactt tttaaagatg tttatacttg ggctggaaaa gatagaatgg
     6601 aagtaggttt gcatggaaat tttggaaaat atgcaccaaa tggaacaatt actaattttg
     6661 ttcctggaaa agatttaaat gcaaccgctc aacaaatttt tacttggctt aaagaagaca
     6721 attacttaac aaattcaaaa gatcttaacg attttgcaaa gaacttagcc gaatttgcta
     6781 gaaacctaaa tgctttgcac ccctttagag aaggtaacgg cagaactcaa agaatatttt
     6841 taaatgaatt ggctaaaaat gcaggttata aacttgattt aaatttaata ccaaaagata
     6901 aaatgataat ggcatctgta gaagcttcac aattgaaatt aggaaaactt gaagccataa
     6961 taaaaacaaa tctaaaaagc tttaagcaaa atttagaaaa agaaaataca ttaggcttat
     7021 ccctatgtta attactattg taaaaataat gtttaactat taaaaaacta ttgttttaat
     7081 attatataac tatgaaaaaa tttattttta ttatgatatt atcatttata tttcttacca
     7141 tacttttata tctatgcaac ataaaaatca acactacaaa atcaatgcct attggaatat
     7201 atcaaacata taataatgat aatattttac ctggagatat tgtgactttt aattatcaaa
//
LOCUS       DAPPKW010000091         7201 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.091, whole genome shotgun sequence.
ACCESSION   DAPPKW010000091 DAPPKW010000000
VERSION     DAPPKW010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 7201)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7201)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7201
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.091"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..434)
                     /locus_tag="RPW04_001691"
     CDS             complement(<1..434)
                     /locus_tag="RPW04_001691"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295775.1"
                     /translation="MINDEHRKKLEKASSRSGYFSGEGYKLLIISTDFHSQNAGFVFL
                     GDEIFEKNGKEFIKVDFAKFETAVKSAINYFRTNLDKYEEEVLSTENLIYKNKFDSNF
                     LEKYFKLKHNFSIFTILHQYFMMALNEFVDEFINYKKEFKND"
     gene            complement(431..1555)
                     /gene="tgt"
                     /locus_tag="RPW04_001692"
     CDS             complement(431..1555)
                     /gene="tgt"
                     /locus_tag="RPW04_001692"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDX6295776.1"
                     /translation="MNFKIDKTDGNARACTLQTAHSTIQTPIFMPVGTLGAVKSLDAI
                     DLKEILDAKIILANTYHLYLRPTSKVVREFGGLHGFSKFDRSFLTDSGGFQAFSLSKI
                     SKPDENGIKFKSHIDGSMHYFTPKSVLDTQYDLSSDIMMILDDLVALPATKERIDLSI
                     KRTINWAKIACEYHKSNKQKSVGIDQNIFGIIQGGTDYNARKLCAEALCEMEFDGLAI
                     GGLSVGESNEEMYDTVEALMPFIDKNRPRYLMGVGTPEDLVQNVERGVDMFDCVMPTR
                     NARNGTLFTSFGKINIKSAAFIKDDNKIDPECDCYTCSNFSRGYLNHLYKARELTFFR
                     LASLHNLHYYLNLVKQMREAIMQGKFKEFKREFYAKRGMI"
     gene            1593..3020
                     /locus_tag="RPW04_001693"
     CDS             1593..3020
                     /locus_tag="RPW04_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002947996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter TrkA"
                     /protein_id="HDX6295777.1"
                     /translation="MKNILIIADGILAKHFLERLFNTKFNSLHNYTIITYNEETLPKT
                     DVNFENFNFYSFDPTSFSKLKLHMKDSYEKAMVIMQSEFDSKSVYENLKKINSKIEID
                     IMDLWGFDEEFKSDHRLKLIDARKILSSRFMDFLPDVPVIADNIGLGIGEIMEVKVPI
                     GSSYVYRHVGNIRKKKWKIAMIYRHQNYIIAAPDTIILPNDVLLIVGEPRVLQSVFRA
                     VKKEPGQFPNPFGNNIYLILDMKNMSDDEMDSLIKDSLLIHSKLNSKKLFIKVINPTL
                     SNMFNKIKNLATNSVYVIIDYFSFGINITKSNMGEFDIGLIITDTKTFKRKKELFYSV
                     KLPLLKIGNAGFCTIKNGVIVGNEEDAERQSSVIMDCCKQLDFNIDFYHFNSKFSGDD
                     SGLIEHFESLSKLFNKNVNIIKDIGNPLLKLRKRSDVLQFLSFSQKILDDGFLSIFSK
                     DTDRLHYILDKNYQMFIPQNDKIRE"
     gene            3023..4132
                     /locus_tag="RPW04_001694"
     CDS             3023..4132
                     /locus_tag="RPW04_001694"
                     /inference="COORDINATES: protein motif:HMM:NF024206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDX6295778.1"
                     /translation="MRFLFFIIFSTCLFANENDIVKDIYKLSLEVRGNTHICGSSGDE
                     YFVNLNEIITLGLNDPIKYEKQLPNKQDYEEATSKDREYFRFWAVRSISNFILFNDFN
                     DAYTKLIPKLTDYYITKFGFSKQRAIFFAIRLANEFLYMAVGNYEKAYKLSTLERMAT
                     NPNLNKEEFISLIYTNKPTRNEITNLLNIALLYNQNEDILQTLIDFGASINGGDESAL
                     FFALKNMKNVELLIKHGANINYENSFGKTALFYAIDFGDIDLIKFLVENGANTNHKYI
                     NKSGKDAIASGFRNIPFYQNLCALEHTSRTVFMHAAFHSVPEVLDLLIKNGANIDDID
                     DMGYNALDYAIWSKNKENIMFLESLQLKSNLEGEI"
     gene            4129..4875
                     /locus_tag="RPW04_001695"
     CDS             4129..4875
                     /locus_tag="RPW04_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDX6295779.1"
                     /translation="MKNTAFITGATSGFGEAVARILASEGYKLILLARRLDRLENLKK
                     ELKNVHIINADIRDKNAIFKAIDELPEQFRDIEILVNNAGLALGQERVLEANLDDFET
                     MIDTNIKGLLYATKAVLPIMNRRKSGCIFNLGSVAGAWPYPGANVYGATKAFVKQFSL
                     NLRNDVKGSNIRVTEIAPGIAKTEFSVVRFKGDEDKSDSVYNSTQYLKAEDIAKIVLD
                     CINLPKHVNINTLEVMPTTQSWAGFFFEKE"
     gene            4878..5981
                     /gene="trmA"
                     /locus_tag="RPW04_001696"
     CDS             4878..5981
                     /gene="trmA"
                     /locus_tag="RPW04_001696"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HDX6295780.1"
                     /translation="MQENSCEYLKHCGSCTLDMPYSEQIDFKKNFIKEHFKDFHNGEI
                     IFFRSPISKFRSRAEFGLYHDDNSLSYTMRRADGGYLKIDKCSIVDEKISVIMPVLLD
                     LLKENQNLKAKLFGVEFITTRDEILIILLYHKDASTIIQELTWLQSKLKVGLIARSKG
                     KKLVFGSSSLNEKLFINGKSYHYVFGDAAFIQPNRNINENMISWVLDHTTDCKDLLEL
                     YCGHGNFTIPLSFKFNKVLATEISKASINSALKNCELNGVDNIKFTRLSAEELMEAFL
                     FKRDFRRLQDIDLRSYEFSHILVDPPRAGCDKSVLDFIRNYENIIYISCNPLTLKENL
                     KLLCKTHSVDKFAIFDQFVHTNHIECAVVLKKY"
     gene            complement(6007..7104)
                     /locus_tag="RPW04_001697"
     CDS             complement(6007..7104)
                     /locus_tag="RPW04_001697"
                     /inference="COORDINATES: protein motif:HMM:NF025062.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002852708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CZB domain-containing protein"
                     /protein_id="HDX6295781.1"
                     /translation="MFGSSNNVNKQYELKIDALKKELENKTKENEDLKTEIQGLKEKI
                     EKSQDCDTISSMAHVMVDGIKNSAKNIQSGIERNLELSHNCITTIDENIQNIGELSQT
                     SNRLIESLNEITNSSNRSRATAENLHKSVDEITNVINLIKDISDQTNLLALNAAIEAA
                     RAGEHGRGFAVVADEVRKLAERTQKATAEVEMNINLLKQNASDMFAQSEEVENISIES
                     NKHVEGFISKFKDLVDRTKHIENNAQAISYDIFVSLVKLDHVVFKVGGYGNVLTKNYE
                     KLADHTSCRLGKWYESRGKDIFEDTVEFAQILDPHKTIHEYVNKAIDLASKHANPMDV
                     IEKFKYAEEQSINLFNIFNNMIAAKVRKIDK"
BASE COUNT         2383 a         1079 c         1211 g         2528 t
ORIGIN      
        1 atatcgtttt taaactcttt tttataattt ataaattcat ctacaaattc gtttaaagcc
       61 atcataaaat attgatgcaa tatcgtaaaa atagaaaaat tatgctttaa tttaaagtat
      121 ttttctaaaa aattgctatc aaatttattt ttatatatta gattttcagt acttaaaact
      181 tcttcttcat acttatcaag attcgttcta aaatagttta tagcgctttt taccgctgtt
      241 tcaaatttag caaaatcaac ttttataaac tctttgccgt ttttttcaaa tatctcatct
      301 cctaaaaata caaatcccgc attttgacta tgaaaatccg tgcttatgat aagcagtttg
      361 tagccttccc cgctgaaata tccgcttcta ctagatgctt tttctagctt ttttctatgt
      421 tcgtcattta tcatatcatg cctctttttg cgtagaattc tcttttaaat tctttaaatt
      481 taccttgcat tatcgcttct ctcatctgtt ttactaaatt tagataataa tgcagattat
      541 gaagacttgc aagcctaaaa aacgtaagtt ctctagcttt ataaaggtga tttaagtatc
      601 cgcggctaaa gttagagcaa gtatagcagt cgcattcagg atcgatcttg ttatcgtctt
      661 tgataaacgc tgcagatttt atgtttatct tcccgaaact agtaaaaagc gtaccgttac
      721 gcgcgtttct agtgggcata acgcaatcaa acatatctac gcctcgctcc acgttttgta
      781 ctaaatcctc aggagttccc acgcccatta agtagcgcgg gcgatttttg tctatgaatg
      841 gcataagggc ttcaaccgtg tcatacatct cttcattgct ctctccgacg cttagtccgc
      901 ctatagcaag tccgtcaaac tccatctcgc aaagtgcctc ggcgcagagt ttgcgcgcat
      961 tatagtcggt tccgccttga atgatcccaa agatattttg atctatcccc acgctttttt
     1021 gtttgtttga tttgtgatat tcacacgcta ttttcgccca gtttatcgtc ctttttatgc
     1081 tgagatcaat tctttcttta gtagcaggga gcgctacaag atcatcaagt atcatcatga
     1141 tatcgctact caaatcatac tgagtatcaa gtacactttt aggtgtaaaa tagtgcatac
     1201 tgccatctat atggctttta aatttgatcc cgttttcatc cggttttgaa atttttgata
     1261 gtgaaaatgc ttgaaatcca ccgctgtctg ttaaaaaact tctatcaaat ttactaaaac
     1321 cgtgcaatcc gccaaactcc cttacaacct tacttgttgg ccgtaaatat aaatgatagg
     1381 tgtttgctag tattattttt gcatctaaaa tttcttttaa atctatggca tccaagcttt
     1441 taaccgctcc aagtgttccg acaggcataa aaataggagt ttggatcgtc gaatgagctg
     1501 tttgcaaagt gcaagctctg gcgttgccgt ctgttttatc tattttaaaa ttcatttatg
     1561 atacaattcc ttttttaaat tttggagatt ttatgaaaaa tatcttgata attgcggatg
     1621 gtattttagc aaaacatttc ttagaaaggc tttttaacac taaatttaat agccttcaca
     1681 actatacgat tataacttat aatgaagaaa ctttgccaaa aacagacgta aattttgaaa
     1741 attttaattt ttatagcttt gatccgacta gtttttcaaa gcttaagttg catatgaaag
     1801 atagttatga aaaagctatg gtaattatgc aaagtgagtt tgacagtaaa tccgtttatg
     1861 aaaatttgaa aaaaataaat tccaaaatcg agatagacat aatggattta tggggatttg
     1921 atgaggagtt caagagcgat cataggctaa aacttataga tgctaggaaa attttaagct
     1981 cgagatttat ggatttttta ccggatgttc ctgtcattgc cgataatatc ggtcttggta
     2041 tcggcgagat aatggaggta aaagtaccta taggaagcag ttatgtatat cgtcacgtag
     2101 gaaatatccg taaaaaaaag tggaaaatag caatgattta tcggcatcaa aactacatta
     2161 tagctgctcc ggatacaata attttgccaa atgacgtact tcttatagtc ggagaaccgc
     2221 gcgttttgca aagcgtattt agagcggtaa aaaaagagcc cggacagttt ccaaatccgt
     2281 ttggaaacaa tatatatcta attttagata tgaaaaatat gagcgatgac gagatggata
     2341 gtctcataaa agactctttg ctgattcatt ctaagctaaa tagcaaaaaa ttatttataa
     2401 aagttataaa tccaacactt tctaatatgt ttaataagat caaaaatctt gctacaaata
     2461 gcgtttacgt tataattgat tattttagtt tcgggataaa tataaccaaa tccaatatgg
     2521 gcgagttcga tatcggactt attatcacgg atacaaagac gtttaaaaga aaaaaagagc
     2581 tattttactc cgtaaagttg cccctgctaa aaataggcaa tgcgggattt tgtaccataa
     2641 aaaacggagt tatagtggga aatgaagagg atgcagaaag acagtctagt gtcataatgg
     2701 actgttgtaa gcaactagat tttaatatcg atttttatca ttttaattct aaatttagtg
     2761 gagatgacag tggtttaatt gaacatttcg agagtctttc aaaactattt aataaaaatg
     2821 ttaatataat aaaagatatc ggaaatcctc ttttaaaact tagaaaaaga agtgatgttt
     2881 tgcaattttt atcttttagt caaaaaattt tagacgatgg gtttttgtct attttttcaa
     2941 aagatacaga tagattgcat tatattcttg ataagaatta tcagatgttt ataccgcaaa
     3001 atgataaaat tagggagtaa atatgagatt tttatttttt ataatttttt ctacttgttt
     3061 atttgcaaat gaaaatgata tagtaaaaga tatatataaa ttaagtcttg aagtaagagg
     3121 aaatactcat atatgcggtt ctagcggcga tgagtatttt gtaaatttaa acgagataat
     3181 aactctcggt cttaatgatc ctataaaata tgaaaaacaa cttccaaata agcaagatta
     3241 tgaagaggct acgtcaaaag atagggagta ttttcgtttt tgggctgtta gaagtataag
     3301 caatttcatc ctttttaatg attttaatga cgcatataca aagttaattc ctaaattaac
     3361 ggattattat ataactaaat ttggatttag caagcaaaga gctatatttt ttgctattcg
     3421 tttagcaaat gaatttttat atatggccgt gggaaattat gaaaaagcgt acaagctaag
     3481 tactttagag agaatggcta cgaatccaaa tttaaataaa gaggaattta tatctcttat
     3541 ttatactaat aaacctacta gaaatgagat aacaaattta ttaaatattg ctttgctata
     3601 taatcaaaat gaagatatat tgcaaactct tatagatttt ggtgctagca taaatggagg
     3661 tgatgaatca gctctgtttt ttgctctaaa aaatatgaaa aatgttgaat tgttgataaa
     3721 acatggagca aatataaatt atgaaaattc attcggaaaa actgcgctat tttatgcgat
     3781 tgattttgga gatatcgatt taatcaaatt tttggtagaa aatggagcta atacaaatca
     3841 taaatatata aacaaatcag gaaaagacgc tatagcatct ggatttagaa atatcccgtt
     3901 ttatcaaaat ctttgtgctt tagaacatac ttcaagaacc gtttttatgc atgctgcatt
     3961 tcatagcgtt cctgaagtgc tagatctgct tataaaaaat ggagctaata tagatgatat
     4021 agacgatatg ggatataatg cccttgatta cgctatttgg agcaaaaata aagaaaatat
     4081 aatgttttta gaaagtttgc aattaaaatc aaatttagaa ggtgaaatat gaaaaataca
     4141 gcttttataa ccggagcaac gtccggtttt ggagaggcag tcgctagaat tttggcaagc
     4201 gagggatata aactcatact tctagcaaga agacttgata gactagaaaa tctcaaaaaa
     4261 gagctgaaaa acgtacatat aatcaatgcc gatataagag ataaaaatgc tatttttaaa
     4321 gctatagatg aacttcctga gcaatttaga gatatagaaa tattggttaa taatgcaggt
     4381 cttgctcttg gtcaagaaag agttttagaa gcaaatttgg acgattttga aactatgata
     4441 gatacaaata taaaaggctt attatacgct acaaaagccg ttttacctat aatgaatagg
     4501 agaaaaagcg gatgtatctt taatcttggt tcggtagctg gagcatggcc gtatccgggc
     4561 gctaatgttt atggagccac aaaagcattc gtaaaacagt ttagtttaaa tcttagaaat
     4621 gacgtaaaag gcagcaacat acgagttaca gaaatagctc ctggtatcgc aaaaactgag
     4681 tttagcgttg ttagatttaa aggtgatgaa gataaaagcg acagtgttta taactctacg
     4741 cagtatttga aagctgaaga tatcgctaaa atagttcttg attgcattaa tttaccaaaa
     4801 catgtaaata taaatacgct tgaagtaatg cctactactc agagttgggc tggatttttc
     4861 tttgaaaaag agtaagtttg caagaaaata gctgtgagta cttaaaacat tgcggaagtt
     4921 gtactttgga tatgccttat agtgagcaga ttgattttaa aaagaatttt ataaaagagc
     4981 attttaaaga ttttcacaat ggcgaaatta tatttttcag atcaccgatt tctaaattta
     5041 gaagtagggc ggagtttggc ttatatcacg atgataatag tcttagttat acaatgagaa
     5101 gagccgatgg cggctattta aagatagata aatgttctat agtcgatgag aaaatatccg
     5161 tcatcatgcc ggttttgttg gatttgttaa aagaaaatca aaatttaaaa gcaaagcttt
     5221 ttggggttga gttcataact acaagagatg aaattttgat tattttactt tatcacaaag
     5281 acgcatctac tataattcaa gagcttactt ggttgcaaag taagcttaaa gtcggtttga
     5341 tagcaagaag caaaggtaaa aaacttgtat ttggaagttc aagtttaaat gaaaaattat
     5401 ttataaacgg taaaagttat cattatgttt ttggagacgc tgcttttatc cagccaaata
     5461 gaaatataaa tgaaaatatg atttcatggg ttttagacca tactacggat tgtaaagatc
     5521 tccttgagct ttactgcgga cacggaaatt ttaccattcc tcttagtttt aaatttaaca
     5581 aagttttggc tacggagata agcaaagctt ctattaacag tgctttaaaa aattgcgagt
     5641 taaacggtgt agataatatc aaatttacaa gattaagtgc cgaagaactt atggaagctt
     5701 ttctctttaa aagagatttt cgtagattac aagatataga tttaagaagt tatgaattta
     5761 gtcatatttt agtagatccg ccgcgagcag gatgcgataa aagcgtgtta gatttcatac
     5821 gaaattacga aaatataatt tatatatctt gtaatccgtt gaccctaaaa gagaatttaa
     5881 aactactttg caaaacgcat agtgtagata aatttgctat ttttgatcag tttgttcata
     5941 caaatcacat cgaatgcgca gtagttttaa aaaaatatta gaagccattt aaactggctt
     6001 ccagatttat ttatctattt tacgtacttt agcagcaatc atattattaa atatattaaa
     6061 taaatttatt gattgctctt ctgcgtattt gaatttttct ataacatcca taggatttgc
     6121 atgtttgcta gctagatcga tagctttatt tacatattcg tggattgttt tatgcggatc
     6181 aagtatttga gcgaactcaa cagtatcttc aaatatatct ttgcctcttg attcgtacca
     6241 ttttcctaga cgacatgatg tgtgatctgc tagtttttcg taattttttg ttagaacatt
     6301 gccatatccg cctactttaa atacaacgtg atctagttta actaaagata cgaaaatatc
     6361 atatgatatg gcttgagcat tgttttcgat gtgttttgtt ctatctacaa ggtctttaaa
     6421 tttagatata aaaccttcta cgtgtttgtt tgactctata gatatatttt caacttcttc
     6481 gctttgagca aacatgtcgc tagcattttg ttttagtaag tttatgttca tctctacttc
     6541 agcggttgct ttttgagtac gctcagctag ttttcttact tcatctgcaa caaccgcaaa
     6601 tccacgtccg tgctcaccgg ctcttgctgc ttctatagct gcatttagag caagaagatt
     6661 tgtttgatct gatatgtctt tgatcaaatt tatcacgttt gtgatctcat caacgctttt
     6721 atgtagattt tccgctgttg cgcgtgatct atttgatgag tttgttattt cgtttaggga
     6781 ttctattaat ctattgctag tttgagaaag ctctccgata ttttgtatat tttcatctat
     6841 agttgtgata cagttatgcg ataattcgag atttctttct attccgcttt gtatattttt
     6901 agcgctattt ttaataccat ccaccataac atgcgccata gaagatatag tatcgcaatc
     6961 ttgcgatttt tctatttttt cttttagtcc ttgaatctcc gtttttagat cttcattttc
     7021 ttttgtctta ttttccagct cttttttaag agcatctatt tttaattcgt actgtttgtt
     7081 tacattattt gatgaaccaa acactttcta cccccttttt tcatacctta cttttactta
     7141 atattctatg ctaataatta tttatataga ataattatca aactttatga atacaataat
     7201 a
//
LOCUS       DAPPKW010000092         6868 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.092, whole genome shotgun sequence.
ACCESSION   DAPPKW010000092 DAPPKW010000000
VERSION     DAPPKW010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6868)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6868)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6868
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.092"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            26..847
                     /gene="cdtA"
                     /locus_tag="RPW04_001698"
     CDS             26..847
                     /gene="cdtA"
                     /locus_tag="RPW04_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cf-CdtA"
                     /protein_id="HDX6295782.1"
                     /translation="MTKIIFKHIKNSLILLFCIALFSACSSKTTNVSTQKINPLGSIF
                     GKTDDPDPLNLGDFPTLLTSNFTNPMPTRTPSLLKKVDLPVMNSLTHGPMFSSAFSKP
                     DLNFKQPTISLQGIPPDLFDRTSDFMVIMGANGVVITIWYTSPGNWLWGYSLYESGNL
                     GGYRVWRLILLPNNEVMIVNFNTRTTCINTYKNGVIHSPCNKDNPFQKFTFRPMTNGA
                     VQIYNKATNSCLQTPVNNLFGFDVFGAINLTTKCTDTIDQQWYLLPPPQVGRLFY"
     gene            856..1656
                     /gene="cdtB"
                     /locus_tag="RPW04_001699"
     CDS             856..1656
                     /gene="cdtB"
                     /locus_tag="RPW04_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin nuclease subunit
                     Cf-CdtB"
                     /protein_id="HDX6295783.1"
                     /translation="MRNVIMIIFIATLGFAKPEDYKIATWNLQGSSAITESKWNISVR
                     QIISGENPADILAVQEAGNLPQTALPTGRSINQGGTIVTEHLWQLGSISRPFQVYIYY
                     AQIDTGANRVNLAIVSRIKADEIIILPPPTVASRPLIGIRIGNDVFFNIHALANGGVD
                     APAIINSVFDRFRNMPNITWMILGDFNRSPESLRGTLGLETRVRVTFLAPPAPTQRSG
                     GTLDWAIVGNSAGDLVRTTLVAVLMLANLRTHLVSDHFPVNFRKFGDN"
     gene            1656..2204
                     /gene="cdtC"
                     /locus_tag="RPW04_001700"
     CDS             1656..2204
                     /gene="cdtC"
                     /locus_tag="RPW04_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytolethal distending toxin subunit Cf-CdtC"
                     /protein_id="HDX6295784.1"
                     /translation="MKALAIIFLFVSISFANENITDAFQIRNANTGIPINIKRFSGQF
                     NYQNWFLNDLGVDPKIKKVDKFSNSFPFGYVQFQVAADVKMCLQIAPSGFLALKNCKQ
                     DYDSGEFETIFQIIPTSSGAMQLRSLVLKTNECLGTFENPNVPIEDRVGLVRCVLEFF
                     VDIEPKQLFVFSPPLSEAKVIR"
     gene            complement(2253..2924)
                     /locus_tag="RPW04_001701"
     CDS             complement(2253..2924)
                     /locus_tag="RPW04_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="HDX6295785.1"
                     /translation="MLDKFIYDITPFSVVDYPDELAAIVWFAKCNMRCVYCYNKDIVL
                     GEGKFDMRYLSEFLNSRQNLLSAVVLSGGECTKSLHFSDVLKLAKNLGYKTKVDTNGS
                     SPEIIEENLSLIDFISLDFKAPKAKFEAITASNLYDKFIKTLQILLKNRVEFECRTTI
                     HADMLNENDISDMVKVLSQNGYDKTYYLQNFFESLNLGNLQKPKTKFDPKLIKSNLNI
                     ELRNF"
     gene            complement(2918..3079)
                     /locus_tag="RPW04_001702"
     CDS             complement(2918..3079)
                     /locus_tag="RPW04_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009649543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295786.1"
                     /translation="MRKEEILAKFKDKRTKCVVYTRVMGYHRPVESFNLGKQGEHKER
                     IKFLEPTKC"
     gene            complement(3090..4454)
                     /locus_tag="RPW04_001703"
     CDS             complement(3090..4454)
                     /locus_tag="RPW04_001703"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDX6295787.1"
                     /translation="MNLILNTDGYKPSHYLQYPNDIKYVSSYIESRGGRWNRVLFYGL
                     QMFLMEYLSKKITQDDILEAKDFMKIYGLSFNEEGWRYIVDEHGGALPLEIEAVKEGS
                     IVQTDNVLLQIRNTDPKLPWLAGYLETAILRAIWYPVAVATNSYFCKQNILQFLNETG
                     TPELIDFCLHDFGARVVSSFESAGIGGSAHMVNFKGSDTITGAVFAKKYYDADMAAFS
                     IPASEHSTMTTWGKERENEAYKNMVDKFSSGIFACVIDSYDTLNAIDLWGKLFDEVKA
                     NGGRVVLRPDSGNPVTMASECLEKMMDIAGFSVNQKGYRVLPNHVRLIYGDGINPQSL
                     VDILNELKLRKISADNIVFGMGGALLQHLNRDTLRFAMKANAVSKDGEHWIDVKKDPI
                     TDPSKRSKSGRLALVRKGNLFKTVRLNELKKEENKLKPVFKDGKILSKVSFDDIRARV
                     KEFN"
     gene            complement(4668..6737)
                     /locus_tag="RPW04_001704"
     CDS             complement(4668..6737)
                     /locus_tag="RPW04_001704"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside triphosphate reductase"
                     /protein_id="HDX6295788.1"
                     /translation="MKIIKRDGSLQDFASYKIENAITKAYKSALKEPNTALIKKVLSE
                     VKDKMSVEEIQDIIEKALFDSGDFTVMRNFMLYRHTHTMQRDGELDERTTYINSTQTI
                     EEYIGKSDWRIMANSNTSYSNAGLINNTAGKVIANYWLDAVYSDHEGAAHRNGDYHIH
                     DLDCLTGYCAGWSLRALLNEGFNGVRGRVESRAPSHFREALSQMANFLGILQSEWAGA
                     QAFSSFDTYLAPYVFKDRLSDIEIKKALTSFIFNLNVPARWGQSPFTNVTIDITPPSD
                     LADQIPTKNNEHLFLNLKDNELEKLCKQRGKNSLKDMTYSDFKPEMDRINIAFYDILT
                     TGDKCSQPFTFPIPTVNLTEDFKWDSSVAKKIFENTAKMGSSYFQNFIGSQYTTDENG
                     NKIPNEKAYKPGAVRSMCCRLQLDLRELLKRGGGLFGSAEMTGSIGVVTINLARLGYL
                     FKGDKSAFYARLDELLELAKSTLEKKRKFINEMYQRGLYPYTARYLRNFNNHFSTIGI
                     NGANEMIRNFTDDKENITTKFGIGFTKELIEYLRAKMIEFQRTTGNLYNLEATPAEGT
                     TYRFAKEDKKRYPDIIQAGFDDKVYYTNSTQLPADFGDDPFEALNLQDELQSSYTGGT
                     VFHLYMREKLSSTKACQHLVKNIVENYKLPYITITPVFSVCPKHGYIAGEHEYCPKCD
                     EEILNLA"
BASE COUNT         2116 a         1400 c         1099 g         2253 t
ORIGIN      
        1 caaaaaatac taaaaaagga aatttatgac taaaattatt ttcaagcata ttaaaaatag
       61 tcttatttta ctattttgta tcgctctttt tagtgcttgc tcatcaaaaa cgacaaatgt
      121 aagcactcaa aaaataaatc cattaggaag catttttggc aaaacggatg atccagatcc
      181 gctaaattta ggcgattttc caactcttct aacatcaaat tttacaaatc ctatgccgac
      241 tagaacgcca tcgctactta aaaaagtgga tttgcctgta atgaactcat taacacatgg
      301 tccgatgttt tcaagtgctt ttagtaaacc ggacttgaat ttcaaacaac cgactatcag
      361 tctacaaggt atcccgcctg atctatttga tagaacaagc gattttatgg tgataatggg
      421 tgcaaacggc gttgtgatca ctatttggta cacatctcct ggaaactggt tatggggcta
      481 ctcgctctat gaaagcggca atttaggagg atatcgtgtt tggcgtctaa ttttactacc
      541 aaataatgaa gtcatgatag tcaatttcaa cactcgcacg acttgcataa atacttataa
      601 aaacggagta attcactcac cttgcaataa agataatcct tttcagaaat ttacgtttcg
      661 tccaatgaca aacggagccg tacaaattta taacaaagct actaattcgt gcttgcaaac
      721 gcctgttaat aatctattcg gttttgacgt ttttggggcg ataaatctta cgacaaaatg
      781 cactgatact atcgatcaac aatggtattt gctcccgccg ccgcaagttg gaagactatt
      841 ttattaggag taaaaatgcg aaatgttatt atgattatat ttatagcaac tttaggcttt
      901 gcaaaaccag aagattataa aattgctact tggaatttgc aaggcagttc ggctataacc
      961 gaaagcaaat ggaatataag cgtacgtcaa ataattagcg gtgaaaatcc agcagatata
     1021 ttagccgttc aagaagcagg aaatttacct caaacagctc ttcctacagg taggagcata
     1081 aatcaaggcg gcacgatcgt aactgagcat ttatggcagc taggcagtat atctagaccg
     1141 ttccaagtct atatatatta tgctcaaatc gacacagggg caaatagagt aaatttagca
     1201 atcgtttcac gcataaaagc cgatgaaatc atcatcttgc cgcctcctac ggtagcttct
     1261 cgtccgctca taggtataag aataggaaac gacgtatttt tcaacataca cgctctagca
     1321 aatggcggag tcgatgctcc ggcgataata aattcagtat ttgacagatt tagaaatatg
     1381 ccaaatatca cttggatgat tttaggcgat tttaaccgct cacctgagag tttaagagga
     1441 actcttggat tagaaactcg cgtcagagta acgtttttag cacctccggc gcctactcaa
     1501 agaagcggcg gaacgcttga ctgggctata gttggaaact cagccggaga tcttgtccga
     1561 actacgcttg tagcagtatt gatgctagca aacctgcgga ctcacctagt ttcggaccat
     1621 tttccggtaa attttagaaa atttggagat aactaatgaa agctttagca ataatatttt
     1681 tatttgtaag cataagtttt gcaaacgaaa acataaccga cgcttttcaa atacgcaatg
     1741 caaacaccgg aattcctata aatataaagc gattttcagg gcagtttaat taccaaaact
     1801 ggtttttaaa tgatttagga gtagatccta agataaaaaa agtagataaa ttttcaaatt
     1861 cttttccttt tggatacgtg caatttcaag tagcagccga cgtaaaaatg tgccttcaga
     1921 tcgctcctag cggattttta gcactaaaaa actgcaagca agactacgat agcggagagt
     1981 ttgagactat ttttcagatc atccctacaa gtagtggagc tatgcagctg cgatcactag
     2041 ttctaaaaac aaacgagtgc ttaggaacat ttgaaaatcc aaacgtgccg atcgaagata
     2101 gagtaggact agtacgctgc gttttagaat tttttgtcga catagagccc aaacaacttt
     2161 ttgtattttc accgccgctt agtgaagcta aggtaattag ataaaacagt cggtaaaagc
     2221 taaaaacggc ttttacctaa ttttaatcca aatcaaaaat tcctaagttc tatgtttaaa
     2281 tttgatttta tcaacttcgg atcgaatttg gtttttggtt tttgtaaatt ccctaaattt
     2341 aaggattcaa aaaaattttg cagatagtaa gttttatcat aaccgttttg acttaaaact
     2401 tttaccatat cactgatatc gttttcgttt agcatatctg cgtggatagt cgttctacac
     2461 tcaaattcaa ctctgttttt tagtaaaatt tgaagcgttt ttataaattt atcatataaa
     2521 ttcgacgcag ttatagcttc aaatttagcc tttggagctt tgaaatcaag tgatataaaa
     2581 tcgatcaaac tcaaattttc ttctataatc tcaggactac ttccattcgt atcgactttg
     2641 gttttatatc caagattctt agctagcttc aaaacatcac taaaatgcaa acttttagtg
     2701 cattccccgc cacttaaaac taccgcactt aaaaggtttt ggcgtgaatt taaaaactcg
     2761 cttagatagc gcatatcaaa cttgccctca cccaaaacta tatctttgtt gtagcaataa
     2821 acgcagcgca tattgcactt cgcaaaccac actatagcag cgagttcatc aggataatca
     2881 acaacgctaa aaggcgtgat atcgtagata aatttgtcta gcatttagta ggttctaaaa
     2941 acttgatcct ctctttatgc tcgccttgtt tgccaagatt aaagctctca actggtctat
     3001 gatagcccat aactctggta taaaccacgc attttgtacg tttgtcttta aatttggcta
     3061 gtatctcttc ttttctcata tcttctcctt taattaaatt ctttaaccct agctctgata
     3121 tcatcaaaac ttactttact tagaatttta ccgtctttga aaaccggttt tagtttattt
     3181 tcttcttttt ttagctcatt taatcgaacc gttttaaaca aatttccttt tctcaccaac
     3241 gcaagacgtc cagattttga acgttttgaa ggatcggtga taggatcttt ttttacatct
     3301 atccaatgct caccgtcttt tgatactgca tttgctttca tagcaaatct aagagtatcg
     3361 cggttaaggt gttgcaaaag cgctccaccc ataccaaaaa ctatattgtc cgcgcttatc
     3421 tttctaagtt ttagctcgtt taaaatatcg actaaacttt gcggatttat accgtctcca
     3481 taaatcagtc tgacgtgatt tggaagtacg cgataaccct tttgatttac gctaaatcca
     3541 gctatatcca tcatcttttc taagcactca ctagccatag ttactggatt tccgctatct
     3601 gggcgaagca cgacgcgacc gccattagct tttacctcat cgaataactt tccccaaaga
     3661 tctatcgcat ttagcgtatc gtagctatct atcacgcaag caaaaatacc actgctaaat
     3721 ttatccacca tatttttata agcttcattt tcgcgctctt ttccccaagt agtcatcgta
     3781 ctatgctcgc ttgccgggat actaaatgcc gccatatcgg cgtcataata ctttttagca
     3841 aatacggctc cagttatcgt atctgagcct ttaaaattta ccatatgagc acttccaccg
     3901 atccccgcac tctcaaagct actcacgacg cgcgcaccaa aatcatgcaa acaaaagtcg
     3961 ataagctcag gagttccggt ctcatttaaa aattgcaaaa tgttttgttt gcaaaaataa
     4021 ctattcgtag ccacagcaac tggataccaa atagccctta aaatagcagt ttctaagtaa
     4081 cctgccaacc atggaagctt tggatcggta tttcgtatct gcaacaacac attatctgtt
     4141 tgaactatgc taccttcttt taccgcttct atctcaagag gaagtgcgcc gccgtgttca
     4201 tctacgatat atctccagcc ctcttcatta aaagaaagtc cgtaaatttt cataaaatct
     4261 ttagcttcta agatatcatc ttgtgttatt ttcttgctta gatactccat taaaaacatt
     4321 tgcaaaccat aaaatagtac tctattccac ctaccgccgc gcgattctat gtaagagctt
     4381 acgtatttta tatcgtttgg atactgaaga taatgtgaag gtttatagcc gtctgtgttt
     4441 agtatcaaat tcatatctta cctttaaatt ttctggcgat tttatcaaaa aagggcttaa
     4501 attttgataa ttcaaattta aataacgctt ttccaatgcc ttaaaaacaa atcttgctca
     4561 gcaaagtatt tttagatgat tttacggttt gaaaccatga gcacccaagg cacactaaag
     4621 cgataaagca aacggtttat ccccataaaa agtactaaaa atacaactta ggccaaattc
     4681 aaaatctcct catcgcattt tggacaatac tcatgctcgc ctgcgatata cccgtgtttt
     4741 ggacacacgc taaacacggg agttatcgta atatatggaa gtttataatt ctccactata
     4801 tttttcacta aatgctgaca agcctttgta ctgcttagtt tttcacgcat ataaaggtga
     4861 aaaacagttc cacccgtata actgctttga agttcatctt gcaaatttaa agcctcgaaa
     4921 ggatcatcgc cgaaatcagc cggaagctga gtagagtttg tataatacac cttatcatca
     4981 aatccagctt gaatgatgtc tggataacgt tttttatctt ctttagcaaa gcgataagtt
     5041 gttccttcag caggagtcgc ttcaagatta tataaatttc cggtagttct ttgaaactct
     5101 atcattttag ctcttagata ttctataagt tcttttgtaa accctatacc gaatttggtc
     5161 gttatatttt ctttatcatc agtgaaattg cgtatcatct catttgcgcc gtttattcct
     5221 attgtactaa aatggttatt aaaatttcta agatatctag cggtatatgg ataaagtccc
     5281 ctttgataca tctcatttat aaatttacgc ttcttttcaa gagtactttt tgccaactct
     5341 agcagttcat caagtcttgc ataaaatgca cttttatcac ctttaaacag atatcctagg
     5401 cgcgctaaat ttatagtaac tacgccgata cttccggtca tctcggcact tccaaaaagc
     5461 cctcccccgc gttttaaaag ctcccttaaa tccagctgaa gcctacagca catagagcga
     5521 acggcacccg gtttataagc tttttcattc ggtattttat tgccgttttc atctgtcgta
     5581 tattgacttc cgataaaatt ttgaaaataa ctcgaaccca tttttgcggt attttcaaat
     5641 atctttttag ccacagagct atcccactta aaatcctcag tcaaatttac agttggtata
     5701 ggaaacgtaa atggctgcga acacttatct ccggtagtta aaatatcata aaatgctata
     5761 tttatcctat ccatttcagg tttaaaatcc gagtaagtca tatcttttaa actattttta
     5821 ccgcgttgtt tgcaaagttt ttcaagttcg ttatctttta aatttaaaaa tagatgctca
     5881 ttgttttttg taggaatttg atcggcaaga tcgcttggcg gagttatatc tatagtaaca
     5941 ttcgtaaatg gactttgacc ccaacgtgcc ggcacattta gattgaaaat aaagctagta
     6001 agagcttttt tgatttctat atcgcttaat cgatctttaa aaacatacgg cgcaagatat
     6061 gtatcaaagc tactaaatgc ttgcgctcca gcccattcgc tttgcaaaat tcccaaaaag
     6121 ttcgccattt gagataaagc ctctctaaaa tgactcggcg ctctgctctc gaccctgcct
     6181 ctaacaccgt taaatccttc atttaacaag gctctaagac tccaaccagc acagtatcca
     6241 gtcaaacaat caaggtcatg tatatgataa tctccgtttc tatgagccgc tccttcatga
     6301 tcgctataaa cagcatctaa ccaataattt gcaatgactt ttccagcggt gttattgata
     6361 agtccggcgt ttgaataact cgtatttgag tttgccataa tacgccaatc agactttccg
     6421 atatactctt ctatagtttg agtcgagttt atataagtcg ttctttcgtc aagctcaccg
     6481 tctctttgca tagtatgagt atgacgataa agcataaaat ttcgcattac tgtaaaatca
     6541 ccgctatcaa aaagagcttt ttctataata tcttgaattt cttctacgct cattttgtct
     6601 tttacctcag acaatacttt tttgataagc gctgtatttg gttctttaag agcactttta
     6661 taagcttttg ttatcgcatt ttctatttta taacttgcaa aatcttgcaa acttccatcg
     6721 cgtttaatta tcttcaaatt taatcctttt tggctgggat tatatattct tttaagtttt
     6781 acaaagctta agaaatataa ttacaatatt gttaccaatg atatcaaata tcatttaaaa
     6841 ataaatttat cattattttt taagcttt
//
LOCUS       DAPPKW010000093         6815 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.093, whole genome shotgun sequence.
ACCESSION   DAPPKW010000093 DAPPKW010000000
VERSION     DAPPKW010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6815
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.093"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            163..2751
                     /locus_tag="RPW04_001705"
     CDS             163..2751
                     /locus_tag="RPW04_001705"
                     /inference="COORDINATES: protein motif:HMM:NF012870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDX6295789.1"
                     /translation="MWVDSKTAAAVLGVNLRTLQRKAINAQNKCQKILTIDTQKIMYQ
                     FIFSSRGGSSGKVLQIWLDEQSENKLISKGYNIEDISDTRTSRAFAKQGLCCNLASTQ
                     WQGEHKSSKAWQEDTAKETSLEPKSSEGSVNDEKYNKTSYETQEESLDKSSQNRTIAD
                     RESVIGADIRENRANKANLVIDKWGKSDGKNSISGNFCNIHNMGGFAVDIDNSGVCVG
                     VTSDNRREISKDINDKENKANLQEIRNPHISSGKRDNADNSVDEFQSYAIEQKNSLAE
                     LFDDMNINDDKKADAFLKAKVVKLWLKARDRKVKIDAFLQYININNMYGKRVSKGQIY
                     DWAKKYANGGIKGLVDERGGNRPLLVELLGYKEKVDELILSSQGKINSYNVYNRLHHH
                     FVSLGLLSHDEFIGKQKEIVAYDSINRYVNKWKKENPTTVLYIEKGYDGAVNSKLAGV
                     GKADWKADFANEYVEIDATTLDLFAKKINLDLASAIWKMNKEAFRDFDECCERVKENQ
                     KRYTVVGLIDVHSGVCSYVIGKSENIYTVKRCLAKYISKFGKPLRVVGDNGKAFKSNE
                     MAGTFESLDIEYLAVRAYSGWLKPYIERSWRSFQDNFSQNIAGFIGHSVEQRQAIEFG
                     FSKMERRLKKGEQTNLKRMLLINDLEKLMDDYIDEFINRRWLDRLGSSPLEAYKSDED
                     KIERLSSTLVCARLGNMLTKKVYKKGIMHDNAYYICAKSFEYDEVKIVPNINNVDEVY
                     IWSTIGEFIGVGTRLNNGEGVSAEIAKEARAFTKKKIDKVRKAANAAAAINQDSFIEH
                     VEYVKNARALEVGSAALEYEDELGALVKTEHKRAKSLRVINELLVPTKPKKQVEISWE
                     GMVKKK"
     gene            3032..3985
                     /locus_tag="RPW04_001706"
     CDS             3032..3985
                     /locus_tag="RPW04_001706"
                     /inference="COORDINATES: protein motif:HMM:NF024991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDX6295790.1"
                     /translation="MSKFEDIRNELSSYLTDKEVSASALARSIGVSPGAISQFKKGEY
                     KGDNEGLAKKIKAYLNSQNAKKNAPVQTVEFREDVFKGLDYQMSNFAINEAANEREIA
                     LIYGAAGTGKTTILKEYVKANPNAVFVEATPHTSAKSLLDDLAEVLKISVPLSLNGKL
                     KAIAKHLSGCERILLIDEAEHLPLKALEDLRRIHDFSRTPLVLVGTEILLQNLMGRNK
                     ELRQLYSRIGSKWIMKGLSKEECKEYFSSPKPFANKLAKGGGFTKDGYANCGELIYEW
                     CGGNFRSSAKLYKKALKLSEYYKVPLDKEVIAKASEMVVLA"
     gene            4034..4373
                     /locus_tag="RPW04_001707"
                     /pseudo
     CDS             4034..4373
                     /locus_tag="RPW04_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016647486.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            4457..4870
                     /locus_tag="RPW04_001708"
     CDS             4457..4870
                     /locus_tag="RPW04_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009649683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295791.1"
                     /translation="MLVKIGKNETKIHDKSLENAVDEFAYLKRKIDSLNDELKAYKDV
                     IANKANELLGDSDALSIGFESISGNRLKVSLGWDVKVKDADTLALLLGDKFSLLIKEE
                     KIYKPEKRLKELALNDDGLKECLEIKEKAASISLI"
     gene            4926..5084
                     /locus_tag="RPW04_001709"
     CDS             4926..5084
                     /locus_tag="RPW04_001709"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295792.1"
                     /translation="MKYYKICKKCKCVEPATYSRCPACGYRLSILEIQSKDVTKDNKN
                     KKELKCVI"
     gene            5072..5278
                     /locus_tag="RPW04_001710"
     CDS             5072..5278
                     /locus_tag="RPW04_001710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295793.1"
                     /translation="MCYMMEKEIEKEKKSKRLSDLAEILSDLDEMIDELCEAIEVEDE
                     EEIYKSAKELVEYYIKTKKKLNLD"
     gene            5317..5787
                     /locus_tag="RPW04_001711"
     CDS             5317..5787
                     /locus_tag="RPW04_001711"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295794.1"
                     /translation="MSFWSIKMDYELGNIRPKLDRHKLGLGLVKTGLKESLHKFIKNV
                     ICEDEKLTIVFSHNMAKFEFEQSKEQFLESARAYYKTHAKEFLHLNFVPKRIESKVDY
                     EKDEPSKYDPFAIPTPLNPPTKKATPEFLNRATNPAVHAGFERIREIIKNRQGG"
     gene            5789..6226
                     /locus_tag="RPW04_001712"
     CDS             5789..6226
                     /locus_tag="RPW04_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295795.1"
                     /translation="MTEKQAILRKQLLSKIHTTKRYKELKENDAWEMFLDCHFRCSTS
                     AELSIKELYACLDLLHGKLIAIEEIDAKGRELIARAKKQLSTLRQVDRLKAAMSDLGW
                     NESQLKMFIIKKLKIIADPFKLNVKNTSKIIYILDKIAKDGKK"
     gene            6223..6408
                     /locus_tag="RPW04_001713"
     CDS             6223..6408
                     /locus_tag="RPW04_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002938290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295796.1"
                     /translation="MICPFCANDKTRVVATIKGLENRRFRYCFKCKKTFETNETVLIK
                     ERDWQELKEYKEEIKDV"
     gene            6401..>6815
                     /locus_tag="RPW04_001714"
     CDS             6401..>6815
                     /locus_tag="RPW04_001714"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295797.1"
                     /translation="MYDKDLLTRLLKSKIAKTKSKDEIIDELLMGLSKQNAKSLKAAL
                     DELFLMIYDNYDNANLKILVENKINALEISVPNINFETIYESLASSAGAKFAFDEIDI
                     KSLETMRKNFYWMKNDYNEKISNDLKAITAKVFNGE"
BASE COUNT         2628 a          950 c         1519 g         1718 t
ORIGIN      
        1 taaaagagta acgcctatag caaagtctgt aaagcaaaaa actaaatatg atttaaaaga
       61 ttattgccag atgcgtggtc tgtctcttag tagcttgtat aagggctata taagcaaaaa
      121 agcggcaaaa atcttaaaaa aagatgggat aaaagtagcg taatgtgggt agatagtaag
      181 actgcggctg ctgttttggg tgtaaattta agaactttgc aacgcaaggc gattaacgct
      241 caaaataaat gtcaaaaaat tttaactatt gatacacaga aaattatgta tcaatttatt
      301 tttagtagcc gtggtggctc aagcggcaaa gtcctccaaa tttggctaga tgagcaaagc
      361 gaaaataaac ttataagtaa aggatataac attgaagata tcagcgatac tagaactagc
      421 agagcatttg caaagcaagg gctttgttgt aaccttgcta gcacacagtg gcaaggtgag
      481 cataagagca gtaaggcttg gcaagaagac actgcaaaag agacaagcct tgagccaaaa
      541 agcagtgagg gtagcgtaaa tgatgaaaaa tataataaga ctagctatga aacgcaagaa
      601 gagagcctgg ataaaagcag ccaaaacaga actatcgcag atagagagtc tgtgatagga
      661 gcagatatta gggaaaatag agctaataag gcaaatttgg tgatagataa atgggggaag
      721 agtgatggca aaaatagtat tagtggcaat ttttgcaata ttcataatat gggcggtttt
      781 gctgtggata tcgataatag tggcgtttgt gtgggcgtca caagtgataa tagaagagag
      841 atttcaaagg acattaatga taaagaaaat aaagcaaatt tacaagagat acgaaaccca
      901 catatatcta gcggcaaacg tgataatgct gataatagcg tggatgagtt tcaaagctat
      961 gctatagagc aaaaaaatag cttagcagag ctttttgatg atatgaatat aaatgatgat
     1021 aaaaaagcag atgcattttt aaaagccaaa gtagtaaagc tttggctaaa ggctcgtgat
     1081 agaaaagtaa aaatagatgc gtttttgcaa tacataaaca taaacaatat gtatggcaaa
     1141 agagtatcaa aagggcaaat ttacgactgg gctaaaaaat acgcaaatgg cggcataaaa
     1201 gggctagttg atgagcgtgg tggcaacaga ccacttcttg tggagttatt aggatataaa
     1261 gaaaaagtag atgagctaat cttatcaagt caaggcaaga taaactcata taatgtctat
     1321 aatagacttc atcaccactt tgtaagctta gggcttttaa gccatgatga gttcatcggc
     1381 aaacaaaaag agatagtagc ctacgactct ataaatagat atgtaaacaa gtggaaaaaa
     1441 gagaatccaa ctacggttct atacatagaa aaaggctatg acggagcggt gaattcaaaa
     1501 ctagccggag ttggcaaagc tgactggaaa gcagactttg caaatgagta tgtagagata
     1561 gacgctacaa cgcttgatct gtttgctaag aagatcaacc ttgatcttgc tagtgcgata
     1621 tggaagatga ataaagaagc gtttagagac tttgatgagt gctgcgagag agtaaaagag
     1681 aaccaaaaac gctacacagt agttggtctc atagatgtgc atagtggcgt ttgctcatac
     1741 gtgataggaa aaagcgaaaa tatctataca gttaaacgct gcttggccaa atatatatct
     1801 aaatttggta agcctcttag agtagtaggc gataacggaa aggcgtttaa aagtaacgaa
     1861 atggctggca cgtttgagag cttggatata gaataccttg ctgttagggc gtatagtgga
     1921 tggttaaaac catatataga gagaagctgg agaagttttc aagataactt cagtcaaaat
     1981 atagctggat ttatagggca ctctgtagag caaagacaag ccattgagtt tggattttct
     2041 aagatggaaa gacgtcttaa aaaaggtgag caaactaatc taaaaagaat gctgcttata
     2101 aacgaccttg aaaagctaat ggatgactat atagatgagt ttataaatcg taggtggctt
     2161 gataggctag gctctagccc acttgaagca tataagagtg acgaagataa aatagagagg
     2221 ttatcaagca ctctagtttg cgcaagactt ggcaatatgc taactaaaaa agtctataaa
     2281 aaaggaatca tgcatgataa tgcctactac atctgcgcta agagctttga atatgatgaa
     2341 gttaagatag ttccaaatat aaacaatgta gatgaagtat atatctggag caccattggc
     2401 gagttcatcg gtgtgggaac taggctaaat aatggagagg gagtaagtgc agagatagct
     2461 aaagaagcaa gggcttttac taaaaagaaa attgataagg taagaaaagc agcaaacgca
     2521 gcagctgcca taaatcaaga tagttttata gagcacgtgg aatatgtaaa aaatgcaagg
     2581 gctttggagg taggaagtgc ggcacttgaa tatgaagatg agctaggagc tttggtaaag
     2641 actgaacata aaagagctaa aagcttaaga gttataaatg aattacttgt gcctactaaa
     2701 cctaaaaaac aagtagagat aagctgggaa ggaatggtta agaagaaata atttaaaggc
     2761 gtttaaagac attttttaaa agcgtttaaa tagtgtataa atcgtattaa aagcttttaa
     2821 aaagcgtttt taaagctagg tagggtgagc cgaactcttg ctggtatttt tagagcgtaa
     2881 ttttgtgtga aattctaaac aaaaaacgtg ttttttaact tgtcattgtc aaaagcttta
     2941 accttttttg gtggtggcaa atgctctcct tattagagcc actaccgcac cgctaccaaa
     3001 aagggttaaa cctaaaaata aggagacaaa aatgagtaaa tttgaagata ttaggaatga
     3061 gcttagttca tatctaacag ataaagaggt aagcgcttca gctcttgcaa gaagtatcgg
     3121 agtaagtcct ggggctataa gtcagtttaa aaaaggcgag tataaaggcg ataatgaagg
     3181 acttgctaaa aagataaaag cctatctaaa tagccaaaac gctaagaaaa atgccccagt
     3241 tcaaacagta gagtttagag aagatgtctt taaaggctta gattatcaaa tgagtaattt
     3301 tgcgataaac gaagctgcaa atgagcgtga aatagcgctg atttatgggg cagctgggac
     3361 tggcaaaact acaatcttaa aagagtatgt aaaagctaat ccaaatgcag tatttgtcga
     3421 agctacgcca catactagcg caaaaagcct acttgatgac cttgctgaag tacttaagat
     3481 aagtgttcca ctaagtctaa atggcaaact aaaagcgatc gctaaacatt taagtggttg
     3541 tgaaaggata ctgcttattg atgaagctga gcatctgcca cttaaggcac ttgaagattt
     3601 acgtcgcata cacgacttta gccgtacacc tttggtgctt gtaggcaccg agattttgct
     3661 gcaaaaccta atgggtagaa acaaagaact tcgccaactc tacagccgta tcggctcaaa
     3721 gtggattatg aaaggtctta gcaaagaaga gtgtaaagag tatttttcat cgccaaagcc
     3781 ttttgctaat aagttagcca aaggcggcgg ttttactaaa gatggctatg caaactgcgg
     3841 tgagctgata tatgagtggt gcggcggtaa ttttagaagt agtgcaaagc tttataaaaa
     3901 ggctttaaaa ctaagtgaat actataaagt gccacttgat aaagaggtca ttgcaaaagc
     3961 ctctgaaatg gttgttttag cttagctttg ctaagcgtta aaaagcacat aaagatagta
     4021 ataaggagaa aaaatgaaaa gaacgatgag actagtatat gtagcatcac catacgctag
     4081 tataagtgtt gcaaaagatg aaaaccaaag aagacaatat gctaaaaaga tcgccataag
     4141 ggagtgccaa aaggtcatag gtgccggata tgagcctatc agtccagttc tagctttttg
     4201 cgatgtattt gatgagagcg atagagagcg agtaatgaat gcctgctttg aactattatc
     4261 aagctgctca tatatactat gcaaaaagcg tctatagtaa agatagcgcc ggaatgaatg
     4321 ctgagaaaag atatgccagg gagcttggta tcactgagct tgaatttgaa taaaaaggag
     4381 aaaatatggc aagtatccat aaaaagttgg ctaataagcc taaaaaagat aaacaaaaga
     4441 gaggaaagga taaaaaatgc tagtaaaaat aggaaaaaat gagacaaaaa tacacgataa
     4501 aagcttagaa aacgcagtcg atgagtttgc ttatctaaaa cgcaagatag atagcctaaa
     4561 tgatgagctt aaagcgtata aggatgtcat tgcaaataag gcaaatgagc ttttaggtga
     4621 tagtgacgct cttagcatag gctttgaaag cattagtgga aacagactta aagtaagtct
     4681 aggctgggac gtaaaagtaa aagacgctga tactttagcc ctgcttttag gagataagtt
     4741 ttctttgctt ataaaagaag agaaaattta taagcctgaa aaacggctaa aagagttagc
     4801 ccttaatgat gatggcttaa aagagtgcct agagataaag gaaaaagcag cgagtattag
     4861 cctgatataa ggtttataga gtggttagct taaccactca attaagtctt atctcaagga
     4921 gaaaaatgaa atattataaa atatgtaaaa aatgtaaatg cgtggaacct gctacttata
     4981 gtagatgtcc agcttgtggg tataggctct ctattttgga gatacagagc aaagacgtca
     5041 caaaagataa taaaaataaa aaggagctta aatgtgttat atgatggaaa aagagataga
     5101 aaaagaaaaa aaatcaaaaa gattgtctga tctagctgag attctaagcg atcttgatga
     5161 gatgatagat gagttatgtg aagctataga agtggaggat gaagaagaga tatataaaag
     5221 cgccaaagag cttgttgagt attatattaa gacaaaaaag aagctaaatt tagactaatt
     5281 tacaaaggct ttaaattgtt tttaaagcct tgataaatga gtttttggag tataaaaatg
     5341 gattatgaac ttggcaatat aaggcctaag cttgataggc ataagctagg tcttggatta
     5401 gtaaaaacag gactaaaaga gagcttgcat aaatttataa aaaatgtgat atgtgaagat
     5461 gaaaaactaa caatagtctt tagccacaat atggcaaaat ttgagtttga gcaaagcaaa
     5521 gaacagtttt tggagtccgc aagagcttat tacaagacac acgccaaaga gtttttacat
     5581 ttaaactttg taccaaaacg catagaatca aaagtggatt atgagaaaga tgaaccttct
     5641 aaatacgatc cgtttgctat cccaactccg ctaaatccgc ccacaaaaaa ggcaacgcct
     5701 gaatttttaa acagagcaac aaatccagca gtgcatgcag gatttgagcg cataagagag
     5761 ataatcaaaa atcgacaagg aggataaaat gactgaaaag caagctatac taagaaagca
     5821 gttacttagc aaaattcaca ccacaaaacg ctataaagag ctaaaagaaa atgatgcgtg
     5881 ggagatgttt ttagattgtc attttaggtg cagtacaagc gcggagctaa gtataaagga
     5941 gctttatgct tgcctagatc ttttgcacgg aaagctaatt gcgattgagg agatagatgc
     6001 taaaggcagg gagcttatag caagagctaa aaagcagctt agtacgctta ggcaagtaga
     6061 tagattaaaa gcggctatga gtgatctggg ttggaatgag agccagctca aaatgtttat
     6121 tataaaaaaa ctaaagataa tcgcagaccc ttttaagcta aatgttaaaa acacaagcaa
     6181 aattatctat attttagata aaattgcgaa agatggtaaa aaatgatatg cccgttttgt
     6241 gccaacgata aaacaagagt ggtagcaacc ataaaaggct tggaaaatag acgcttccgc
     6301 tattgtttta aatgtaaaaa aacgtttgaa acaaacgaaa ccgttcttat aaaagagcgt
     6361 gattggcaag agctaaagga atataaagag gagataaaag atgtatgata aagatctact
     6421 tacaagactg cttaagagca aaatagcaaa gacaaaaagc aaagatgaga ttatagatga
     6481 gcttttaatg ggacttagca agcaaaacgc taagtcatta aaagcagcat tagatgagct
     6541 atttctaatg atttatgata actatgataa tgcaaactta aaaatcttag tagaaaacaa
     6601 gataaacgca ctagagataa gcgtcccgaa tataaacttc gagacgatat acgagagctt
     6661 agctagtagt gctggggcta aatttgcgtt tgatgaaata gatataaaat cgctagagac
     6721 gatgcgaaaa aacttctact ggatgaaaaa tgattacaac gaaaaaataa gtaatgatct
     6781 aaaagctatc acggccaaag tctttaatgg cgaga
//
LOCUS       DAPPKW010000094         6677 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.094, whole genome shotgun sequence.
ACCESSION   DAPPKW010000094 DAPPKW010000000
VERSION     DAPPKW010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6677
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.094"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..239
                     /locus_tag="RPW04_001715"
     CDS             <1..239
                     /locus_tag="RPW04_001715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295798.1"
                     /translation="KFIGKGNLIQNYIKKYNIQSKLDFQDDKFIINTNLHLTCFMDII
                     FEAHYTGEITSTRLLASSNEEVALENEYNIKEPK"
     gene            236..3307
                     /locus_tag="RPW04_001716"
     CDS             236..3307
                     /locus_tag="RPW04_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HDX6295799.1"
                     /translation="MTPNVSENQIQQNCINLLRNMGYEFIAREQNISFRDGKTSGVLL
                     KEMLAKKLYEINSYEYKGQKYKFSQNNIAKAIEDIDVSLNEGLMVANEKITNRLLLGT
                     SYEESLTDGSKKSFSFKYIDFDDIENNHFLITEEFALERINQNETIKTRRPDLVIFIN
                     GIPLVVIELKKSSVSYENGVRQLAMEQKNDEIPQLFKFIQLTVAGNSNEARYGTTGTP
                     AKFYGIWKEDELRESNLAMIVHDRQITSLDRTLFALVSRDRLLRLIKHYILFDKKAKK
                     VCRYQQFFGIEKTLQRVERTDNGMRAGGLIWHTQGSGKSLTMVMLTKLLKLTYTKAKI
                     IVVTDRIDLDEQIHRTFENTEIKASRASSGSDLIDKLQSGVSVITTLVHKFEKVSNSK
                     VCINDNSIFVLVDESHRTQSGDLHNAMKKALPFACYLGFTGTPLLKREKSSFNKFGGE
                     IHRYTIGDAVKDGAVLPLLYEGRLVDQEVLSPEGLVRKFDMISRDLSDEAKRDLQRKW
                     ARFQRVASSEPRLEFIAMDINEHFKKTLKMQNGGFKAMLATSSKYEAIKYHEIFEEYG
                     DIKTAYIISSNEHEELEGGHKEYVAKSWQETIKDFGSEEEYVKYVKDEFIHGDEIDLL
                     IVVDKLLTGFDAPRASTLYVDKQLKEHNLLQAIARVNRLYDGKDYGYIVDYRGLLGEL
                     DQALSDYASLSEFDIDDINGAVIDVRNEIAKAKTYYANLDSLFCEVKFKDDLESYVEV
                     LSDIQKRDDFKEWLSYLARAFKLALCSEKVSDILSQDEIKTYKSKIKFYNELRQVAQL
                     RYHETCDFGKYEAQMQKLLDTFVNANGINELTKLVNIFETEFDEEVQRVEGKNAKADT
                     ILSAISAVIQERMESNPAFYKSISDQIEDVISKYKEKRLSEEEKLAKAKQLKGLITGA
                     IKPNIDKYPKEFENKKSIFAIYDNLVDILGDIEVPDSKLIIKNLTIKFDEIYEKASKK
                     PEWIKNKDVENDITSAMEDMLWDIEDEYGISIENKEMIYQTIRGIGIGFYA"
     gene            3300..3965
                     /locus_tag="RPW04_001717"
     CDS             3300..3965
                     /locus_tag="RPW04_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDX6295800.1"
                     /translation="MLENILIVKKDVKNITLKVKPTGEVVLTTPKAVSDEYTEYIIKK
                     RAKWIEQKKEFFASFQTNQKEYVSGEEFRYLGKSYRLKVISSKDENVKLQRGYLEIRT
                     KNKNDLNKKQNLLYEWYYEKALLHFFSILQEWNKIVKRDIKDIKIRQMKTRWGSCNPY
                     KSYINLNIELIKKPKICIEYVIFHELTHLIYPDHSSKFYEYLSLYMSDWEKRKEILEQ
                     SNL"
     gene            4097..5167
                     /gene="ispG"
                     /locus_tag="RPW04_001718"
                     /gene_synonym="gcpE"
     CDS             4097..5167
                     /gene="ispG"
                     /locus_tag="RPW04_001718"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HDX6295801.1"
                     /translation="MQRYPTKQILVGNVKIGGDAPISVQSMTFAKTRDVKECLEQINR
                     LYFAGCDIVRCAVFNKEDIVGLEQVKKESPLPIVADIHFNYSYAVAVSKFVDAIRINP
                     GNIGGKDRIKAVVEACKERNIPIRIGVNSGSLEEQFENKYGRSVKGMVQSALYNIGLL
                     EELEFTDIAVSLKSSDVYNTMQAYRELRPFTSYPFHLGVTEAGTTFHATIKSAIALGG
                     LLLEGIGDTMRVSITGELEEEIKVARAILQDTGLQKSGLNIISCPTCGRLQSDLVSAI
                     KIVEEKTKHIKEPLNVSVMGCVVNAIGEAKGADVAIAFGKGNGLVMRHGEVVARLKEH
                     ELVDRFLSEIDDEIKQRASNNG"
     gene            5160..6560
                     /locus_tag="RPW04_001719"
     CDS             5160..6560
                     /locus_tag="RPW04_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDX6295802.1"
                     /translation="MAEIIGQNLYDLDMERSILSAILFSEDNLGEIYDLINPSDFYLK
                     GHADVYGAMIECLNHDEPVDMAFVKKRLANNFDDTVFTEIITTNSILDIKKYATELKE
                     KSIKRSLINVAHKIPNKVNEDKASRDMVDDISGEIYSLVDNSNNGIIKESKEIITDVI
                     KELEKQKNLIDRDIVGIDTGFKVLNEKTKGFKDGDLVIIAARPGMGKTTFVLNLVQKV
                     LNQDLGVVFFSLEMPATQLMLRLLSAKTSIPLQNLMTADMDNDEISRLSDACDEMSRK
                     KLFVYDSGNVTIHQVRTQMRKLKASHPEIKLCVIDYIGLMTNSSAYTDRHLQIAEISR
                     GLKLLARELNLPVIALSQLNRSLEARANKRPMLSDLRESGAIEQDADTILFVYRNDVY
                     MEQEEKEREQKAKLDGKEYVRKFVPNKIEENAEIIIGKNRNGPTGTVDVIFQKEFTRF
                     VDKSFSAPSMSVEFNG"
BASE COUNT         2452 a          948 c         1420 g         1857 t
ORIGIN      
        1 ataaatttat tggaaaagga aatttaatac aaaattatat aaaaaaatac aatattcaaa
       61 gtaaattaga ttttcaagat gataaattta ttataaatac aaatttacat cttacatgtt
      121 ttatggatat aatctttgag gctcattata ccggagaaat aacatctaca cgtcttttgg
      181 caagttctaa cgaagaagtt gctttggaaa atgaatataa tataaaggag cctaaatgac
      241 gccaaacgta tctgagaacc aaatccagca aaactgtata aatttgctcc gaaatatggg
      301 ctatgagttt atcgctagag agcaaaacat atcttttaga gacggtaaga cgtccggcgt
      361 actgctcaaa gagatgttgg ctaaaaagct ttatgagata aacagctatg agtacaaagg
      421 acaaaagtat aaatttagcc aaaacaacat cgctaaagcc atagaagata tagacgtgtc
      481 actaaacgaa ggcttgatgg tggcaaacga aaagatcacg aatcgcctgc ttttaggcac
      541 tagctatgaa gagagcttga cagatgggag taaaaagagc ttttctttta agtacataga
      601 ctttgacgat atagaaaata accatttttt gatcacggaa gaatttgccc tagaacgcat
      661 aaatcaaaac gaaacgataa agacgcgtcg ccctgatctg gtgatattta taaacgggat
      721 accgcttgtc gtgatagaac tcaaaaaatc aagcgtaagc tatgaaaacg gcgtaagaca
      781 gcttgccatg gagcaaaaaa atgatgaaat cccgcagctt tttaaattta tccaactcac
      841 ggtagccgga aatagcaacg aagcaagata cggcaccacc ggcactccgg ctaaatttta
      901 tggtatatgg aaagaagatg agctaagaga gtcaaatttg gcaatgatag tgcatgatag
      961 gcagatcacg agtcttgata ggacgctttt tgcgctagtt agccgagata gactcttaag
     1021 actaataaaa cactatattt tgtttgataa aaaagcaaaa aaagtctgca gatatcagca
     1081 gttttttggt atagaaaaaa cattgcaaag agtagagcgg acggataacg gcatgagagc
     1141 cggcgggctt atctggcata ctcaaggaag cggtaagtct ctcacgatgg tgatgctcac
     1201 aaaactactc aagctaactt atacaaaagc aaagatcata gtagtgactg atcgcataga
     1261 cttagatgag cagatacata ggacttttga aaatacagag ataaaagcga gtagggcgag
     1321 tagtggaagc gacttgatag acaagctaca aagcggcgta agcgtgataa ctactcttgt
     1381 gcataaattt gaaaaagtgt caaattcgaa agtttgtata aatgacaata gcatatttgt
     1441 cctagtagat gaatcccacc gcacgcaaag tggggatttg cataatgcta tgaaaaaagc
     1501 cttgccgttt gcttgctatc ttggatttac cgggacacca ctgctcaaaa gagaaaaaag
     1561 cagctttaat aaatttggcg gtgagataca tagatatacg ataggtgacg cggtaaaaga
     1621 cggcgctgtt ttgcctctgt tatatgaagg taggctagta gatcaagagg ttctcagtcc
     1681 tgaagggctg gtacgtaaat ttgatatgat atcaagagat ctaagcgacg aggccaaaag
     1741 agacttgcag cgtaaatggg ctagatttca gcgtgtggca tctagcgagc caagacttga
     1801 atttatagcg atggatataa atgagcattt taaaaagact ttaaagatgc aaaacggcgg
     1861 atttaaagcg atgcttgcga caagtagcaa gtatgaagct atcaagtatc atgagatatt
     1921 tgaagagtat ggagatatca agacagcata tatcatctct agcaacgaac atgaagagct
     1981 tgaaggcgga cataaagagt atgtggcgaa gtcttggcaa gagactataa aagactttgg
     2041 tagcgaagaa gaatatgtaa aatatgtaaa agatgagttc atccatggcg atgagataga
     2101 tctgctaata gtagtcgata aactcctaac tggttttgat gcgccaagag ctagcacgtt
     2161 atacgtagat aaacagctca aagagcataa tcttttgcaa gctatcgcta gagtaaatag
     2221 gctttatgat ggaaaagatt atggatatat agtcgattat cgtgggcttt tgggtgaact
     2281 ggatcaggct ttgagcgatt atgcttctct tagtgaattt gacatagatg atataaatgg
     2341 tgcggttata gacgttagaa acgagatagc aaaagcaaag acttattatg caaatttaga
     2401 tagcctgttt tgtgaagtca aatttaaaga tgatcttgaa agctatgtag aagtattgtc
     2461 tgatatccaa aaaagagatg attttaaaga gtggctatct taccttgcta gagcctttaa
     2521 gctggcactt tgtagcgaaa aggtgagtga tatactaagt caagatgaga taaaaactta
     2581 taaaagcaag atcaaatttt ataatgaact aagacaagtg gcacagctaa gatatcatga
     2641 gacttgcgat tttggtaaat atgaagcgca aatgcaaaaa ctactagata cctttgtcaa
     2701 tgcaaatggc ataaatgagc taacaaagct tgtaaatatc tttgagacag aattcgatga
     2761 agaagtacag agggtcgagg gtaaaaacgc caaagccgat acgatcttaa gtgctataag
     2821 tgccgtgata caagaaagga tggagtcaaa tcctgcattt tacaaatcta tctcagacca
     2881 gatcgaagat gtgatcagca aatacaaaga aaaaagactt agcgaagaag aaaaactagc
     2941 caaggcaaaa cagctaaaag gtctcataac cggcgcgata aagccaaaca tagataaata
     3001 tccaaaggaa tttgaaaata aaaaatctat atttgcgatc tatgataatc tagttgatat
     3061 cttaggcgat atagaagtcc cagactcaaa gctcataatc aaaaatttga ctatcaaatt
     3121 tgatgaaatc tatgaaaaag catcaaaaaa gccagaatgg atcaaaaata aagatgtcga
     3181 aaatgacatt actagcgcta tggaagacat gctatgggat atagaagatg agtacggaat
     3241 ctctatcgag aataaagaaa tgatttatca aacaatcaga ggtatcggga tcggctttta
     3301 tgcttgaaaa tattttaatc gttaaaaaag atgtaaaaaa catcacatta aaggtaaagc
     3361 ctacaggcga agttgttttg actactccaa aagctgtaag tgatgagtat acggagtata
     3421 tcatcaaaaa aagagctaaa tggatagagc aaaaaaaaga atttttcgcg tcgtttcaaa
     3481 ccaatcaaaa agagtatgta agtggtgagg agtttagata tttaggtaag agttataggc
     3541 taaaagtcat tagctcaaaa gacgaaaatg tcaaactcca acgcggctat ctagaaattc
     3601 gcaccaaaaa caaaaatgac ctaaacaaga agcaaaattt gttatatgag tggtactatg
     3661 aaaaggcttt gcttcatttt tttagcattt tgcaagagtg gaacaagata gtaaagcgtg
     3721 atataaaaga tatcaagata aggcaaatga agacaagatg ggggagctgc aatccatata
     3781 aatcatatat aaatctcaat atcgagctta tcaaaaagcc taaaatttgc atcgagtatg
     3841 ttatatttca tgaattaact catctgatat atcctgatca ttcaagcaaa ttttatgagt
     3901 atttatcgct ttatatgagc gactgggaaa aacgaaaaga gattttagag caatcgaatt
     3961 tataatttaa ttcataatcg gttgctattt atttttaaat ttaatatttg tcaagtaacg
     4021 gatttgagtt ttaaacttat catattttta tccaaattta gttacacttt gcgtatcaaa
     4081 tttacggaag aaaaatatgc aaagataccc tacaaaacaa attttagtcg gaaatgtcaa
     4141 gataggcggc gatgctccta tcagtgttca gtctatgaca tttgcaaaaa ctagagatgt
     4201 gaaagagtgc ttagagcaga taaataggct ttattttgca ggttgtgata tagttcgttg
     4261 cgcagtgttt aacaaagaag atattgttgg tcttgaacag gtaaaaaaag agagtccgtt
     4321 gcctatagta gctgatatac actttaatta tagctatgct gtggctgttt ctaaatttgt
     4381 agatgctatt aggataaatc ctgggaatat cggtggaaaa gataggataa aagctgtcgt
     4441 ggaagcatgt aaagagcgaa atattcctat tagaataggc gtaaactcag gtagtcttga
     4501 agagcagttt gaaaataaat acggacgcag cgtaaaaggt atggtgcaaa gcgctttata
     4561 taacatagga ttacttgaag agcttgaatt taccgatatc gcagtgagtt taaagtctag
     4621 tgacgtgtat aataccatgc aagcttatag agagcttcgt ccatttactt catatccgtt
     4681 tcatctcgga gttactgaag cagggactac ttttcatgca actataaaat cagctatcgc
     4741 tctaggaggt ttgctgctcg agggtatcgg cgatacgatg agagttagta taacaggtga
     4801 gcttgaagag gagataaaag ttgctcgcgc catacttcaa gataccggac ttcaaaaatc
     4861 aggattaaat atcatatctt gtcctacttg tggaagacta caaagcgatc ttgtgagtgc
     4921 tataaaaata gttgaagaaa aaactaagca tataaaagaa cctttaaatg taagcgtgat
     4981 gggatgtgtg gtaaatgcga taggagaagc aaaaggagct gatgttgcta tagcttttgg
     5041 taaaggaaat ggactggtga tgaggcacgg tgaagtcgta gcaagactaa aagagcatga
     5101 gctagtagat agatttttaa gtgaaataga tgatgagatc aagcaaaggg ctagtaataa
     5161 tggctgagat aataggacaa aatttatacg atcttgatat ggaaagatcg attttaagtg
     5221 cgattttatt tagtgaggat aatcttggcg agatttatga tcttataaat cctagtgatt
     5281 tttatttaaa aggtcacgct gatgtttacg gcgctatgat agaatgttta aatcatgatg
     5341 aaccggttga tatggcattt gttaaaaaac gacttgcaaa taattttgat gatactgttt
     5401 ttaccgagat tattacaaca aattctatat tggatataaa aaaatatgct acggagctaa
     5461 aagagaagtc tataaagaga tctttgatta atgtagccca taaaattcct aataaagtaa
     5521 atgaagataa agcaagtcgc gatatggtag atgatataag cggtgaaatt tactcgcttg
     5581 tggataattc aaataacgga attattaaag aaagtaaaga gattattacc gatgttatca
     5641 aagagttgga aaaacaaaaa aatctaattg atcgtgatat agtcgggatt gataccggat
     5701 ttaaggtatt aaatgagaaa acaaaaggct ttaaagacgg tgatttggtt attatagctg
     5761 cacgtcctgg aatgggaaag actacttttg tattaaatct tgtgcaaaaa gtgttaaatc
     5821 aagatttggg cgttgtattt ttctctttag aaatgccggc aactcagctt atgttaaggc
     5881 ttcttagtgc taaaacttca attccgcttc aaaatttaat gactgcggat atggataatg
     5941 atgaaatctc taggctaagc gatgcttgcg acgagatgtc tagaaaaaaa ctgtttgttt
     6001 atgatagcgg aaatgtgacc attcatcaag taagaactca gatgagaaaa ctaaaagcgt
     6061 ctcatcccga aatcaaactt tgcgtgattg attatatcgg tttgatgaca aattcttcgg
     6121 cttacactga tagacattta caaatagccg agatttctag aggcttaaag cttttagctc
     6181 gtgagttaaa tcttccggta attgctttat ctcagctaaa cagaagttta gaagcaagag
     6241 caaataaaag accgatgtta agtgatttaa gagaatcagg agccatagag caagacgccg
     6301 atactatttt atttgtttat agaaatgatg tttatatgga gcaagaagag aaagaaaggg
     6361 agcaaaaagc aaagcttgat gggaaagagt atgtgagaaa atttgttcca aataagatag
     6421 aagaaaatgc tgagattatc attggaaaaa atagaaacgg accaaccggt accgttgatg
     6481 tgatatttca aaaagaattt actcgttttg tcgataagag tttttcagct cctagtatga
     6541 gcgtagagtt taatggatag taaaaaacaa taaaaccgct tttggttctt ttagcggttt
     6601 taaatttatc tcgttttatt taaattttgt gatttttttg agtttgtatt atataaaaaa
     6661 tcgccgttat aattata
//
LOCUS       DAPPKW010000095         6348 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.095, whole genome shotgun sequence.
ACCESSION   DAPPKW010000095 DAPPKW010000000
VERSION     DAPPKW010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6348
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.095"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            145..1947
                     /locus_tag="RPW04_001720"
     CDS             145..1947
                     /locus_tag="RPW04_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018713917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone biosynthesis decarboxylase"
                     /protein_id="HDX6295803.1"
                     /translation="MQKYIDLLDKNGLLKIIDKPCDIDLEIAHLSYIEVKKDNSKALL
                     FTNPIDKNGKKFDPVLTNIFGSFKALNLIFGKDSNEIANEIEKLLKPTKPSTLKEKIE
                     FFTYLLSLKSVFPKRLKTKGISQECEFKEPNLYDLPILKTWEEDGGAFITMGQVYTKD
                     LNSNTQNLGMYRLQVHSKNELGMHWQIHKDAAHFFHEYKKAGLKMPVSVAIGGDPLYI
                     WCGQAPLPKNIFELMLYGFIRKTPAKLVKSLTNDIFIPHDSDYVIEGFVDTNRLKNEG
                     KFGDHTGFYTPVEPFPVMEVTKITHKKNPIFHATVVGKPPLEDKFMGYATERIFLPLL
                     KTTAPELVDYKMPENGVFHNLILAKFNALYPAHATQLMHAFWGVGQMSFVKHAVFVPS
                     SAPHLDDYANLTKYILNRFSPQSMLITSGVCDQLDHASPNACFGGKLGIDASVDNSSS
                     APNLISDDKLLYKFKSVNQNILELKQYFLDTKSPICFVKFDKDRLVKQVFDELKPFDE
                     HFKILIFVDVSSRLENLYMLVWRITNNIDAKRDIFVRNELVCIDATSKFELDGYTRGW
                     PKETNCSKEVIENLIKKGLLERDEELFEKFEIFG"
     gene            1951..2712
                     /gene="murI"
                     /locus_tag="RPW04_001721"
     CDS             1951..2712
                     /gene="murI"
                     /locus_tag="RPW04_001721"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HDX6295804.1"
                     /translation="MKIAIFDSGIGGLSLLNEALKRFRGVEFIYFADNKNAPYGTKSK
                     DEIIRLCLNCVQFLTNLSVDMIVIACNTATSAAITELRSSFSVPIIGMEPAVKLGVNA
                     GGDILVVATPATISGNKLSDLIHKVNLESKTHLLALPKLVEFAQNMEFDSLEVLKYLK
                     DEISKFDLSNISLLVLGCTHFNYFKDSFRAILPNKTGIIDGVNGTINQMIRRLGGVSE
                     FGDKNSIRYISSTENLNVKKIEPYLKRLDIMREIN"
     gene            complement(2889..3125)
                     /gene="yedF"
                     /locus_tag="RPW04_001722"
     CDS             complement(2889..3125)
                     /gene="yedF"
                     /locus_tag="RPW04_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDX6295805.1"
                     /translation="MKNYEITYTLDIQGEACPMPAVATLEVLPTMKRGEVLEVLCDCP
                     QAINSIPVDAKNRGFEVLSVEQDGPTLRFIIRKP"
     gene            complement(3125..4342)
                     /gene="yedE"
                     /locus_tag="RPW04_001723"
     CDS             complement(3125..4342)
                     /gene="yedE"
                     /locus_tag="RPW04_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004276928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HDX6295806.1"
                     /translation="MLNLLNSFKQKYIVNFWDVGKAMIALAILSAVYFGIFGGVWAVT
                     GEMTRWGGEFLELFGMDLSSYSYYKMQNLNGTPLTRFEGIMLIGMFLGASIAAFMANK
                     VKFRLPVSGIRVFQAIVGGLLSGFGARLAFGCNLANFFTGLPYFSLHTWLFAVFMVIG
                     IYCAVQVGKFKIFRPKVVLERCGVNGKGIEHDKNRANRHFAYGVTILVFSIIWLVYLF
                     INVPSFDLKVKASISPLALIFGIAFGFIISKGQVCFTSCFRDLFLFGRDTAAKGAFFG
                     MIIATLIVFVLMLNGYNSKIISFSPAVAIGAFLFGFGIVFAGGCECGWTYRATEGQMH
                     FMIVGISNFVGTAILALNYDRFPDWFKDGPKINLLDAFGSLGGLALNLSLFVVALLLV
                     VFYKKRFFAKGGY"
     gene            complement(4480..6297)
                     /gene="glmS"
                     /locus_tag="RPW04_001724"
     CDS             complement(4480..6297)
                     /gene="glmS"
                     /locus_tag="RPW04_001724"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009650468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDX6295807.1"
                     /translation="MCGIVGYIGDKEKKSIIINGLKELEYRGYDSAGMAIMSGNCCSD
                     INYFKSVGKLENLVSKMESFTSKEFGVAIGHTRWATHGKPTEINAHPHIGEYSFVIHN
                     GIIENYKELKDELETLGIKFISQTDTEVIVHLFEYYNKTAQTPFDAYKKTISRLRGAY
                     ATLLITKAAYGEIFFAKNAAPLIIAKDGDEIYFSSSDAPLIGLAKDAMYLEDGSFGVA
                     KLGEIKLFDKEANELNLSFAPLPKDKGYARKDGFRFFMEKEIYEQSQVITECLMGRVG
                     DDDINLDIDNSIFDGIDEIVLCACGTSYHAALSASYLFERVAKIRAKVEVASEFRYKE
                     PLLRKSSLFIVISQSGETADSLEALKIAKNAGLKTMAICNVDNSSIVRLASEVILTRA
                     GIEKGVASTKAFATQVICLWMLVLKLAKLRQSIDTINLQNEIKALRNIPSVVHFDSSL
                     QERIYRLAKHYLHGHGFFFIGRDIFYPLALEGALKLKEISYLHAEGYPAGEMKHGPIA
                     LADTGLYTIALLPKTLLYEKTKSNVEELAARDAFITAISPEAFELSDDFIQTNLYDHP
                     MSEFFEMMIVLQLFALEISVRLGNDVDMPRNLAKSVTVE"
BASE COUNT         2174 a         1239 c         1050 g         1885 t
ORIGIN      
        1 tatcaagcaa aaaaaggagt taaaatgaaa gactttaata aatggattgg tataaagacc
       61 aaataaatag atgaacaaga ccatttttaa actaatacaa atctattttt tgctaatata
      121 atttaaaatt tcaggtgagg atatatgcaa aaatacattg atttattgga taaaaatggt
      181 cttttaaaaa taatagataa accttgcgat atagatcttg agatagctca tctaagctac
      241 atagaagtca aaaaagataa ttcaaaagct ctacttttca caaatcctat cgataaaaac
      301 ggaaaaaaat ttgatcctgt tttaacaaat atttttggaa gttttaaagc tttaaattta
      361 atattcggaa aagatagtaa cgaaatagca aatgagatag aaaagctgct aaaaccgaca
      421 aaaccttcta cgcttaaaga aaaaatagag ttttttacct atcttttaag cctaaaatca
      481 gtatttccaa aacgtttaaa aactaaaggc atctcccaag agtgcgaatt taaagaacca
      541 aatttatatg atctgccgat actcaaaact tgggaagaag acggcggagc gtttatcacg
      601 atggggcaag tttatacaaa agatctaaac tcaaacacgc aaaatttagg tatgtaccgc
      661 ctgcaagtac atagcaaaaa cgagcttgga atgcactggc aaattcacaa agacgccgct
      721 catttttttc atgaatacaa aaaagcaggt cttaaaatgc cggtcagtgt agcaatcggg
      781 ggcgatccgc tctacatttg gtgtggtcaa gccccgcttc caaaaaatat ttttgagctt
      841 atgctttatg ggttcatcag aaaaactccg gcaaaactag ttaaatctct cacaaacgac
      901 atttttatcc cgcacgactc agactacgtc atagaaggat ttgtagatac aaatagacta
      961 aaaaacgaag gaaaattcgg agatcacaca ggattttaca caccggtgga gccgttcccc
     1021 gttatggaag ttacgaaaat aactcataaa aaaaatccta ttttccacgc aacagtcgtc
     1081 ggaaaaccgc cgcttgaaga taaatttatg ggatatgcga ctgagcggat atttttaccg
     1141 cttttaaaaa ctacggctcc tgagctggtt gattataaaa tgcctgaaaa cggggtattt
     1201 cacaatctaa ttttagctaa atttaacgca ctttatcctg ctcacgctac gcagcttatg
     1261 cacgcatttt ggggagtcgg acagatgagt tttgtaaaac acgccgtttt tgtaccatca
     1321 agtgcacctc atcttgatga ctacgcaaat cttacaaaat atattttaaa ccgtttttcg
     1381 ccgcaaagca tgttgataac tagcggtgtt tgcgaccagc ttgaccatgc tagtccaaat
     1441 gcttgttttg gaggaaagct aggaattgac gcaagtgtcg ataactcatc aagcgcacca
     1501 aatttaataa gtgacgacaa acttctatat aaatttaaaa gcgtaaatca aaatatctta
     1561 gagctaaagc agtatttttt agacacgaaa agtcctattt gttttgttaa atttgacaaa
     1621 gatagactcg taaaacaggt ttttgatgag cttaaacctt ttgatgagca ctttaaaata
     1681 ctgattttcg tagatgttag ctcaaggctt gaaaatctat acatgcttgt ttggaggata
     1741 acaaacaata tcgatgcaaa gcgcgatatt tttgtacgca acgagcttgt ttgcatagac
     1801 gctactagca aatttgagct cgatggctac actcgcggct ggccaaaaga gacaaactgt
     1861 tcaaaagaag tcatagaaaa cctcatcaaa aaaggccttt tagaacgcga cgaagaatta
     1921 tttgaaaaat ttgagatatt tggatagatg atgaaaatag cgatttttga ctcgggcatc
     1981 ggcggcctta gtcttttaaa tgaagctttg aagcgcttta gaggcgtgga gtttatatat
     2041 tttgccgaca acaaaaatgc accgtatggc acaaaaagta aagacgagat aatccgcctt
     2101 tgtttgaact gtgttcaatt cttgactaat ttgagcgtag atatgatagt catagcgtgt
     2161 aatacagcaa ctagtgctgc tataactgag cttagaagca gtttttcagt gcctataata
     2221 ggaatggagc ctgccgtgaa attaggagta aatgctggtg gcgacatact tgtagttgcc
     2281 acgcctgcta ccataagcgg aaataaatta tcggatttaa tccataaagt aaatttagaa
     2341 agcaaaacgc atctcttagc cttaccaaaa cttgtagaat ttgcgcaaaa tatggaattt
     2401 gacagtctag aggttttgaa atacttgaaa gatgagatat ctaaattcga tctatcaaac
     2461 atcagtttac ttgtacttgg atgtactcat tttaactatt ttaaagatag ttttagagct
     2521 attttaccaa acaaaaccgg cataatagac ggcgtaaacg gcacgataaa tcaaatgata
     2581 cgtagacttg gaggagttag cgaattcgga gataaaaact ctataagata catatcttca
     2641 acggaaaatt tgaatgtaaa aaagatagaa ccttatctaa aaaggctaga tataatgaga
     2701 gaaataaact aagttcagat tgtaaatatg caaaaaataa taaataaacc ggcataaagc
     2761 gataaaattg ttaaaaacaa agcagcgtta tacttataca aatatcttac cgcgaattta
     2821 aaaacaaaaa ccgcactact agatttaaaa atttgagcta agactagccc aaatttgctc
     2881 atatcgatct acggttttct tatgataaat ctaagagtcg gaccgtcttg ctctactgat
     2941 aaaacttcaa aaccgcgatt tttcgcatca acagggatag aatttatcgc ctgtggacag
     3001 tcgcaaagca cttctaaaac ctcacctctt ttcatagtcg gtaacacttc aagcgtagca
     3061 acagccggca taggacaagc ctcgccttgt atatcaagag tataagttat ctcataattt
     3121 ttcattagta tcctcctttt gcaaaaaagc gttttttata aaagacgacc agcaagagtg
     3181 ctaccacaaa tagacttaaa tttaaggcca aacctccaag agagccgaaa gcatctagta
     3241 aatttatttt cgggccgtct ttaaaccagt ctggaaaacg gtcgtaatta agcgccaaga
     3301 tagcagttcc tacaaaattt gagataccta ctatcataaa atgcatttgc ccctcagtag
     3361 ctctataagt ccagccgcac tcgcagcctc ctgcaaaaac gataccaaaa ccaaacaaaa
     3421 acgctcctat agccaccgcc ggactaaaac ttataatttt agagttatag ccatttagca
     3481 taagcacgaa aacgatcaaa gttgctatta tcataccaaa aaatgcacct tttgcggccg
     3541 tatcacgacc gaacaaaaac agatctctaa aacaagaagt aaagcagacc tgcccttttg
     3601 agatgataaa accaaaagcg atgccaaata tcaaggcaag cggcgaaata ctggctttta
     3661 ctttaagatc gaagctcggt acgtttataa aaagataaac taaccaaata atagaaaaca
     3721 caagtatagt aacgccataa gcaaaatgtc tattcgccct atttttgtca tgttctattc
     3781 ctttgccatt tactccacat ctctccagca cgactttcgg acgaaaaatt ttaaattttc
     3841 ccacttgcac tgcgcaataa attcctatca ccataaacac ggcaaataac caagtatgaa
     3901 gcgagaagta cggaagtcct gtgaaaaaat tagctagatt gcatccaaaa gcaagtcttg
     3961 cgccaaatcc agaaagtaaa ccaccaacta tggcttgaaa tacacgaata ccgcttactg
     4021 gaagtctaaa tttaacttta tttgccataa aagcagcaat tgaggcacct aaaaacattc
     4081 cgataagcat aatgccttca aaacgagtaa gcggagtgcc atttaaattt tgcattttat
     4141 agtatgaata acttgataaa tccataccaa aaagctctaa aaactcgccg ccccagcgtg
     4201 tcatctcacc agtaaccgcc caaacaccac cgaaaatgcc gaaataaacg gcactcaaaa
     4261 tagcaagtgc tatcatagcc ttgccgacat cccaaaaatt tacaatgtat ttttgtttaa
     4321 aagagttaag aagattaagc attataagcc ttgtaaattt gtaacgtgtc caactgacac
     4381 ctttaaaagg caaaattata atgctttaaa gtttaatatc tagttaaatt taaaaactaa
     4441 cttatagttt aaatttactc agcttgcttt ttaaaacaat tactcgacag taacgctttt
     4501 tgcaaggttt cttggcatat caacgtcgtt tcctaaacgt actgaaattt caagcgcaaa
     4561 aagctgtaaa actatcatca tctcaaaaaa ctcgctcata ggatgatcgt ataaatttgt
     4621 ttgaataaaa tcgtcgctaa gttcaaaagc ttcaggactg atagctgtta taaaagcgtc
     4681 tcttgcggct agttcttcga cgtttgattt agtcttttca taaagcaaag tttttggaag
     4741 caaagcgata gtatagagtc cagtatctgc tagagcgata ggaccgtgtt tcatctctcc
     4801 tgctggataa ccctccgcgt gaagatagct tatctctttt agttttaaag ccccttcaag
     4861 agcaagagga taaaatatat ctctaccgat aaagaaaaat ccatggccat gcaaatagtg
     4921 ttttgctaat cgataaattc tctcttgcaa actactatcg aaatgcacaa cactaggtat
     4981 atttctaagc gcttttatct cattttgaag attgattgta tctatacttt gtcttaattt
     5041 tgctagtttt aaaaccagca tccacaagca gatgacttgg gtagcaaacg ctttagtgct
     5101 agctactcct ttttctatac ctgcacgagt caatataact tcactagcaa gtctaactat
     5161 gcttgaatta tccacattac aaatagccat agttttaagt cctgcatttt tagcaatttt
     5221 aagggcttct aaactatctg ccgtttctcc gctttgagat attactataa ataaagaact
     5281 ctttcgcaaa agcggctctt tatatctaaa ttcacttgcg acctcaacct tagctcttat
     5341 ctttgctact ctttcaaata gataactcgc gcttagcgcg gcgtgataac tagtaccgca
     5401 tgcgcacaat actatctcgt ctataccatc gaaaatagag ttatcgatat caagatttat
     5461 atcatcatca cccactcttc ccatcaaaca ttcggtgatg acttgacttt gctcgtaaat
     5521 ttctttttcc ataaaaaatc taaaaccgtc ttttctggca taccctttgt cttttggaag
     5581 cggtgcaaag cttaagttta actcgtttgc ttctttatca aaaagcttta tctcacctaa
     5641 ttttgctacg ccaaaactgc catcctcaag atacatagca tcttttgcaa gaccgataag
     5701 aggagcatcc gaacttgaaa aatatatttc atccccgtct tttgctatga taagaggtgc
     5761 tgcattttta gcaaagaata tctctccgta agctgctttt gtgataagaa gagtcgcgta
     5821 agctcctctt agtcttgaaa tagtcttttt atatgcatca aacggagttt gagcagtttt
     5881 gttgtagtat tcaaaaagat gaacgatgac ttctgtatct gtttggctta taaatttaat
     5941 acctaaagtt tctaactcgt cttttagctc tttataattt tcgattatac cattgtgtat
     6001 gacaaaacta tactcgccaa tatgcggatg agcgtttatc tctgtaggtt tgccgtgagt
     6061 cgcccatcta gtgtgaccta ttgccacgcc aaattcttta ctcgtaaaac tttccatttt
     6121 acttaccaaa ttttctaatt ttccaactga tttaaaatag tttatatcac tgcagcaatt
     6181 tccgctcatt atagccattc ctgcgctatc ataacctcta tactcaagct cttttaagcc
     6241 gtttataata atactttttt tctctttatc acctatgtaa cctactattc cacacataaa
     6301 tttcctttta atttttggta gttattaaat ttataatact actatact
//
LOCUS       DAPPKW010000096         6139 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.096, whole genome shotgun sequence.
ACCESSION   DAPPKW010000096 DAPPKW010000000
VERSION     DAPPKW010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6139)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6139)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6139
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.096"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(88..618)
                     /gene="mog"
                     /locus_tag="RPW04_001725"
     CDS             complement(88..618)
                     /gene="mog"
                     /locus_tag="RPW04_001725"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002940911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HDX6295808.1"
                     /translation="MKAKIGVLTLSDRASSGVYEDKSGIAIKDILQDWLISETEFIYK
                     IIPDEYDLIVENLKDMCDVSKCDLIFTTGGTGPSPRDVTPEATEEICQKLMPGFGELM
                     RTTSLKFVPTAILSRQTAGIRGKTLIVNLPGQPKAIRECLEPIFPAIPYCLDLIGAAY
                     LQTDESKMKAFRPNKK"
     gene            complement(608..2278)
                     /locus_tag="RPW04_001726"
     CDS             complement(608..2278)
                     /locus_tag="RPW04_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDX6295809.1"
                     /translation="MKIMRKFEFNLNKKIWVIAAGTILIVLLGVVFFRNIPKYISLMQ
                     YDNFLQSNSIQSAVIDGEKIVIKAGSQNYYVVKDSINLNELGQKVPLKVSSDYSILEN
                     LLLIIIFLVMFVFGLKYFKKANLNYKKSSTTDTNDLNQIVSSDVAPAISNVMFKDVAG
                     INDVKLELMEIVDFLKNPKAYQELSIKMPKGVLMVGPPGVGKTLIAKAVAGEANVPFF
                     YQSGASFVQIYVGMGAKRVRELFSKAKAYAPSIIFIDEIDAVGKARGGGRNDEREATL
                     NQLLTEMDGFTDNSGVIVIAATNKIEMIDEALLRSGRFDRRIFLSLPDCKDRMAILKS
                     YLKDKKHEVDIDTVAKNTTGFSGAGLATLVNEAAINALRNHRVIIQNDDFKAVENRVL
                     YGKKKIYSLSQSEKEIQALYQGAKALSAEWFGIDFDKISLLEDRFLSQDGFLESKTMI
                     LSRIKVYLAGSVALKIYKNELYTNSSNDILNARELAKKLVIDYAMTGNLMATNNDIKD
                     ILDECLNETAELIKGIQKELFALSSYLVDNESVDRETIKDMIRKIHES"
     gene            complement(2256..3497)
                     /gene="mtaB"
                     /locus_tag="RPW04_001727"
     CDS             complement(2256..3497)
                     /gene="mtaB"
                     /locus_tag="RPW04_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HDX6295810.1"
                     /translation="MKIYFKTFGCRTNIYDTELIKSYIKSYKITNNENEADIIVVNSC
                     TVTNGADSGVRSYINQVKNSGKKVVLTGCGAVSKGEELFKKSSVFGVLGASNKSKIDE
                     FLNSQNPFFELGDLNFIDKNIVSNYENHTKAFIKIQEGCNFKCSYCIIPSVRGKSRSI
                     DEEVILNEAKILASNGYNEIVLTGTNIGSYGEEKSSSLGKLLQKLGSIKGIKRIRLGS
                     IEPSQIDESFREILQESWLEKHLHIALQHTSQTMLDIMRRRNRAFKDIELFNELSNLG
                     FALGSDYIVAHPGESEKVWEEGLENFKKFPITHLHAFIFSPRSGTHSASMKIDVDGVV
                     AKNRLKILKNIAFVNNFEFRKRNKTNLNILVEKQGSDGLYDGFDQFYNKIKIKSDKDI
                     SKEWVELSNYEVKPDENYAEI"
     gene            complement(3494..5074)
                     /locus_tag="RPW04_001728"
     CDS             complement(3494..5074)
                     /locus_tag="RPW04_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HDX6295811.1"
                     /translation="MKKLFVIFVVLIPFLSVFGVVNDASSQKIDELNAKISNYDAKIK
                     NNIWLIRYSNYNTYQNLVTELEYAKNELENLDKKNSKKADDLKKRISSLKEQIELLKE
                     YERSPFQSMLVVPEIEEIKKITNPIALISGFSYIKKLKNEKEEYINRLIKLEDALNVF
                     IEKESLQQEIYDINSSSENLSKLNETRREISEFQIAQDIATTTFGVYQKKLDESINRA
                     SLEVKEQIKQALSILFTIIVVILIGFLCKFVAKRYVTDNQKFYTINKFINVINFTIII
                     FILLFAYIENVSYMVTILGFASAGLAIAMKDMFMSLLGWSVIIFGGTFHVGDRIRVRY
                     QNSDYVGDIIDISLLRMTIYEDITLTTYLTNRRSGRIIFVPNNYIFTELIANYTHSGM
                     KTVWDGIDIMLSFDSNHKKAMYIIKNITRKYSKGYTDIAKKQMNKLRDQYSIKNPNVE
                     PRIYSFFEPYGINISVWYMTNSYAALALRSTISAEIIEALNLEEDIKIAFPTQTLFFG
                     KKSKPMSHITDVSKEILY"
     gene            complement(5071..6111)
                     /locus_tag="RPW04_001729"
     CDS             complement(5071..6111)
                     /locus_tag="RPW04_001729"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDX6295812.1"
                     /translation="MKIDINLNDDNKNYSVFIDELKNLKFKGKVAVITNSKVGGLYLG
                     EILNLIDADEIFSVCIPDGEQYKNLAMIEYILEQLFVSRLERNSTLIALGGGVISDMT
                     GFAASIYERGINFINIPTTLLAQVDASVGGKTGVNNKFGKNLIGTFYQPKAVYCETKF
                     LNSLPNREFNAGMAEVIKMATMFDKDFFKFIQDNSVENSQILKQIIAKCVEIKAGVVA
                     KDEKESGIRAVLNYGHTFAHVIEMQTNYKKFLHGEAVAIGINMANHLACKLGLLSKKD
                     LDIIEQTLIKFGLPTTYRISDEEVFYDSFFLDKKSENKKIKFILPNGIGSYALRNDID
                     KNSVLDILRMFK"
BASE COUNT         1838 a         1175 c          769 g         2357 t
ORIGIN      
        1 taagtaatta ttagtgtaag tataaaactt acacttttaa atttttatta atatatggaa
       61 ttactagttt ctttgccaca taaaacttta ctttttattt ggtctaaaag ctttcatctt
      121 actctcatca gtttgtaaat aagccgctcc tatcaaatct aaacagtatg gaattgccgg
      181 aaatataggc tctaaacact ctcttatggc ttttggctga ccgggaagat ttactataag
      241 agttttacct cttatacctg ctgtttgtct agacaagata gccgtaggaa caaattttaa
      301 actagtagtt ctcatcagct caccaaatcc aggcataagc ttttggcaaa tttcctcagt
      361 agcttcagga gtaacgtctc taggagatgg tccggtacct cctgtagtga aaatgagatc
      421 acacttagaa acatcacaca tatcttttaa attttcaact atcaaatcat actcatctgg
      481 tataatttta tatataaact cggtttcact tataagccaa tcttgcaaaa tatcttttat
      541 agcaattccg cttttatctt cataaactcc actgctagct ctatcgctta gagttaaaac
      601 tcctatttta gctttcatgt atcttcctta tcatatcttt tatagtctct ctatctacgc
      661 tttcattatc cactagatag ctactaagtg caaaaagttc tttttgtatg ccttttataa
      721 gctcagccgt ctcatttaaa cactcatcta aaatatcttt tatatcgtta tttgtcgcca
      781 taagatttcc ggtcatagcg tagtctataa caagtttttt agcaagttct ctcgcattta
      841 atatatcatt acttgaatta gtatatagct catttttata aattttcagt gctacgctac
      901 ctgctaaata tacctttata cgagataaaa tcatagtctt agactctaag aaaccatctt
      961 gagataaaaa tctatcttca agcaaagata tcttatcaaa atctatacca aaccactcgg
     1021 cactaagtgc tttagctcct tgatatagag cttgaatttc tttttcactt tgactcaaag
     1081 agtaaatttt ctttttaccg tataaaactc tattttccac agctttaaaa tcatcgtttt
     1141 gaatgataac tctgtgattt ctaagagcat ttatagctgc ttcatttaca agagttgcta
     1201 gtcctgctcc gctaaatcct gtggtgtttt ttgctacagt atctatatct acttcatgtt
     1261 ttttatcttt tagataagac tttagtatcg ccattctatc tttgcagtcc ggcaaactta
     1321 aaaatatcct tctatcaaaa cgaccgcttc taagtagagc ttcatctatc atctctattt
     1381 tatttgtagc tgctataact ataacgccgc tattatcggt aaatccatcc atctctgtta
     1441 atagctggtt taaagtagcc tctctttcat cgtttctacc gccgcctcta gccttgccaa
     1501 ctgcatctat ttcatctata aatataatac ttggtgcata tgcttttgct tttgaaaaca
     1561 gctctctaac tctttttgca cccattccta cataaatttg tacaaaactt gcaccgcttt
     1621 gatagaaaaa tggtacatta gcttctcctg cgactgcttt tgctataaga gttttaccta
     1681 ctcccggagg tcctaccatt aaaacgcctt ttggcatttt tatactgagt tcttggtacg
     1741 cttttggatt tttcaaaaaa tccactatct ccattaactc taattttacg tcatttatcc
     1801 cagcaacatc tttaaacata acatttgata tagcaggagc aacatccgag ctaactattt
     1861 ggtttaaatc atttgtatct gttgtggagc tttttttata atttaaatta gcttttttaa
     1921 agtattttaa tccaaaaaca aacataacaa gaaatataat aatgagcaac aaattctcta
     1981 aaatactata atcgctgcta actttcaaag gaactttttg acctaattcg tttaaattta
     2041 tggagtcttt tacaacataa tagttctgac ttccagcttt tataacaatc ttttctccat
     2101 ctataaccgc actttggata gagtttgatt gcaaaaaatt atcatattgc attaaactta
     2161 tatattttgg aatatttcta aaaaaaacta caccaagaag aactattaaa atagttcctg
     2221 ccgctataac ccaaattttt ttatttaaat taaattcaaa tttccgcata attttcatcc
     2281 ggttttacct cgtaattgct aagctctacc cactcttttg atatgtcttt atctgatttg
     2341 atctttatct tgttataaaa ctgatcaaat ccgtcataaa gtccatcact gccttgtttt
     2401 tctactaaaa tatttaaatt tgttttgttt ctttttctaa attcaaaatt atttacaaat
     2461 gctatatttt ttaggatttt tagacgattt tttgctacta cgccatctac atcaatcttc
     2521 atagaagccg aatgagtccc gcttctaggg ctaaatataa atgcgtggag atgagttata
     2581 ggaaattttt taaagttctc caaaccctct tcccatactt tttcgctctc tcctggatga
     2641 gctactatat aatcactacc gagagcaaac cctaaatttg aaagctcgtt aaaaagttct
     2701 atatctttaa acgccctatt tctgcgacgc attatatcaa gcatagtttg actcgtatgt
     2761 tgcaacgcta tatgaagatg cttttctaac cacgactctt gcaaaatttc tctaaaactc
     2821 tcatctattt gactaggctc aatgctgccg agtcttattc gttttatacc ttttatacta
     2881 cctaattttt gaagaagttt tccaagtgaa ctactttttt cttctccata actacctata
     2941 tttgtaccag ttagcactat ctcattatat ccgttactag ctagaatttt agcctcgttt
     3001 agtataactt cttcatctat gcttctactt tttcctctta cagaaggtat aatgcagtag
     3061 ctgcatttaa aattacaacc ctcttggatc tttataaaag cttttgtatg attttcatag
     3121 ttgcttacta tatttttatc gataaaattt agatccccaa gctcaaaaaa tgggttttgc
     3181 gaatttaaaa attcatctat tttagattta ttgctagctc caagaactcc aaaaacggag
     3241 cttttcttaa ataactcttc acctttacta acagccccac aacctgttaa aaccactttt
     3301 ttaccgctat ttttcacttg atttatgtag cttcttactc cgctatcggc tccatttgta
     3361 actgtgcatg aatttactac tattatatct gcttcatttt cgttatttgt tattttatag
     3421 ctttttatat agctttttat aagttccgta tcgtagatat ttgttctaca accaaaagtt
     3481 ttaaagtata ttttcaatat aaaatttcct tactaacatc agttatatga ctcataggct
     3541 tactcttttt accaaaaaac agagtttgag ttgggaaagc tatttttata tcttcttcta
     3601 aatttaaagc ttcgataatc tcggcgctaa tagtgcttct aagagctaaa gccgcatatg
     3661 agtttgtcat ataccatacg cttatattta taccgtacgg ctcaaaaaag ctataaattc
     3721 taggctcgac atttggattt tttatactat actgatctct tagcttattc atctgttttt
     3781 tggctatatc ggtatatcct tttgagtatt ttctcgtgat attttttatg atatacatag
     3841 cttttttatg gttgctgtca aaactaagca ttatatctat accgtcccat acggttttca
     3901 taccgctgtg agtatagttt gctataagtt cggtaaaaat ataattattt ggtacgaata
     3961 ttatacgtcc gcttcttcta tttgtaagat aagtagtcag agttatatct tcataaatgg
     4021 tcattctaag cagacttata tctatgatat cacctacata atcactattt tgatatctaa
     4081 ctcttattct atcgccgacg tgaaaagtac cgccgaaaat gataacgctc cagccaagca
     4141 agctcataaa catatctttc atcgcgatag caagaccagc agaagcaaat ccaagtatag
     4201 ttaccatata gcttacgttt tctatatatg cgaacagtaa aataaatata ataatagtaa
     4261 agtttatcac atttataaat ttatttatcg tataaaattt ttgattatcc gttacgtatc
     4321 tttttgcaac aaatttacat aaaaatccta ttaatataac tacaattatc gtaaaaagta
     4381 tgcttaaagc ttgttttatc tgctctttta cttccaaact agctctattt atagattcat
     4441 caagcttttt ttgatatacg ccaaacgtgg ttgtagcgat atcttgtgcg atctgaaact
     4501 cgctaatctc acgtctagtt tcattaagct tggaaagatt ttcgctgctt gagtttatat
     4561 cgtaaatttc ttgctgcaaa ctctcttttt ctataaaaac attaagtgca tcttctaatt
     4621 ttataagccg atttatatac tcttcttttt cgttttttag ctttttaata tatgaaaatc
     4681 cagatataag agctatagga tttgtgatct ttttaatctc ttctatctca gggactacga
     4741 gcatactttg aaaaggtgat ctttcatact cttttaacag ctctatctgc tcttttaagc
     4801 tggaaattct tttttttaga tcatccgctt ttttgctatt ttttttatct aaattctcta
     4861 gctcgttttt tgcatattct aactctgtaa ctaaattttg gtaagtattg taatttgagt
     4921 atctaataag ccaaatatta ttttttatct tagcatcata atttgatatt tttgcgttta
     4981 attcatctat tttttggcta gaagcgtcat ttacaactcc aaaaacagat aaaaacggta
     5041 ttagaacaac aaaaattaca aacagttttt tcatttaaac atcctcaaaa tatctaaaac
     5101 gctattttta tctatatcgt ttctcaaagc gtacgatcca ataccgtttg gaagtataaa
     5161 tttgatcttt ttgttttcac tctttttatc tagaaaaaac gagtcgtaaa atacctcttc
     5221 atcgcttata cgataagtag taggcaaacc aaattttata agagtctgct ctataatatc
     5281 tagatctttt ttagacaaaa gaccaagctt acaagctaaa tgatttgcca tatttatacc
     5341 aatagcaacc gcttcgccgt gtagaaattt tttataattt gtttgcattt cgataacatg
     5401 agcaaatgtg tgaccgtaat ttaatactgc gcgaattcca gattccttct catcttttgc
     5461 tactactcct gcttttatct ctacgcattt tgctatgatt tgttttagta tttgactatt
     5521 ttctacgcta ttatcttgta taaatttaaa aaaatcttta tcaaacatag tagccatttt
     5581 gatcacttca gccattcccg cattaaactc tctatttggt aaagagttta gaaatttagt
     5641 ttcacaatat acggcctttg gttgataaaa agtaccgata agattttttc cgaatttatt
     5701 atttactcct gttttgccgc ctacacttgc gtctacttgc gctaaaagcg ttgtcgggat
     5761 atttataaaa tttataccgc gctcataaat actagccgca aatccggtca tatcacttat
     5821 aactccacct ccaagagcta taagagtact gtttctctca agtctgctta caaaaagctg
     5881 ctctaatata tactcgatca tagctagatt tttatactgc tcgccatctg ggatacaaac
     5941 gctaaatatc tcgtcggcgt ctatcaaatt taaaatctct ccaagatata aaccgcctac
     6001 ttttgagttt gttattacgg caactttgcc tttaaattta agatttttaa gttcatctat
     6061 aaatacgcta taatttttat tatcatcgtt caaattaata tctattttca tatattctgc
     6121 ctttttttaa atattttac
//
LOCUS       DAPPKW010000097         6066 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.097, whole genome shotgun sequence.
ACCESSION   DAPPKW010000097 DAPPKW010000000
VERSION     DAPPKW010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6066)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6066)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6066
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.097"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            203..1450
                     /locus_tag="RPW04_001730"
     CDS             203..1450
                     /locus_tag="RPW04_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDX6295813.1"
                     /translation="MDLRQRALDYHEGGKIEINVKKPCKTADDLSVAYSPGVAEPCKE
                     IEADNELAYRYTNKGNLVAVITDSTAVLGLGDIGAVAGKPVMEGKSVLFKKFANVDAF
                     DIELDEHDPDKIVEICKALAPTFGGINLEDIGAPKCFYIEKKLQESVNIPVMHDDQHG
                     TAIITTAGLINALKITGKKVGEIKVVVSGSGAAGIACAKMYRNLGVKHIVMLDSKGVI
                     HTKRENLTPEKADFAIDTDARTLADSMRGADMFLGLSKAGVLSKDMVASMASNPIIFA
                     LANPTPEIMPEIAHSVRDDIMMGTGRSDYPNQVNNVLGFPFIFRGALDVRATKITENM
                     KIAAAHALAELAEEYVPDSVLEAYGEKDIKFSKDYIIPKPFDPRVLLVVAPAVAEAAV
                     KDGVALVKDFDKSAYIEKLKKLF"
     gene            1848..2477
                     /gene="upp"
                     /locus_tag="RPW04_001731"
     CDS             1848..2477
                     /gene="upp"
                     /locus_tag="RPW04_001731"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDX6295814.1"
                     /translation="MQNIRLISHPLIEHKLTILRDKNTDPFQFRMLIDEITYLMLFEA
                     SRDFELKDTEVITPVATTKSKKLAQKIMICPILRAALGMLGSVFKLLPDASVGFLGFQ
                     RDEKTLKAEFYYAKLPKDHAERIAIVIDPMFATGGTAIDAVRFLKEKGVKKIKFISIL
                     AAPEGLNRFSEVYPDVEVYTAAIDRGLNEKGYIIPGLGDAGDRVFNTVY"
     gene            2485..3168
                     /locus_tag="RPW04_001732"
     CDS             2485..3168
                     /locus_tag="RPW04_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone via futalosine step 1"
                     /protein_id="HDX6295815.1"
                     /translation="MVFGKIDYLNLLPFHVFLKSYPLQNAAKKSIEFKKGVPSKLCKD
                     LYYRRIDAAVISSIESRRSKYKVLDFGICAKKDVKSVLVRKNTKRSLDPASMSSNMLS
                     RILKLDGEVIIGDNALIEYLKCGEDEFYDMGKIWNQRTGLPFVFGRFTYIKNKNSYKK
                     IIKIFLNRNIKIPKYILDNYAISRGVKSNDIIWYLKFISYKIGVKEKKSLKIFLNKAR
                     NLKFNPNSV"
     gene            3276..4640
                     /gene="gdhA"
                     /locus_tag="RPW04_001733"
     CDS             3276..4640
                     /gene="gdhA"
                     /locus_tag="RPW04_001733"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HDX6295816.1"
                     /translation="MGVHEYINHTLEHIKKTSPGQNTFLQAATEVLHSLEPLLSAEDK
                     YLKHKIIDRIVMPERTTMFRVTYMNDKNEPCSHFGYRVEFNSALGPYKGGLRFHPSVC
                     LDIIKFLGFEQILKNSLTGLNMGGGKGGANFDPKGKSDGEIMRFCQSFMNELYKLIGD
                     VKDVPAGDIGVGGREIGYMFGQYKKLTNRFDGALTGKGLSWGGSLARTEATGYGSVYF
                     ANEMLKKSGGSLEGKKCSVSGAGNVAIYTVEKLYEFGALPITVSDSTGFVYDKDGIDT
                     QLLKRLKEVERKGLSDYTDFRKNAVFTPVKAYKEGTNGVWSVPCDAAFPSATQNELHL
                     VDIKTLYNNGCRLVCEGANMPSTLDAIDFMISKKDFLFGPAKAANAGGVATSGLEMAQ
                     NASMQKWSFEEVDKKLHDIMRNIFNESYDTSVEFGDAGNLVLGANIAGFRKVADAMID
                     QGYV"
     gene            complement(4695..5717)
                     /gene="pseI"
                     /locus_tag="RPW04_001734"
     CDS             complement(4695..5717)
                     /gene="pseI"
                     /locus_tag="RPW04_001734"
                     /EC_number="2.5.1.97"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudaminic acid synthase"
                     /protein_id="HDX6295817.1"
                     /translation="MNSTSQRPYIIAEMSANHCGDKNLAFKIIKAAKDAGADALKVQT
                     YTADTITIDCKDEIFMTQEGGLWAGQSLYDLYKKAYTPWEWQSELKAYADEIGIDFFS
                     TPFDYSAVDFLESINVPMYKIASFEAIDYPLIRYAAKFKKPMIISAGISSLEEIYEAI
                     DACKSVGNNDITILKCTSSYPAKIEDMNLITIKDMLKRFSPMGVKVGLSDHSMSLEVP
                     ITAVALGASMIEKHFTIDRALGGEDSGFSLNKDEFKAMSSAVRNTYKALGSVDYSINE
                     RNRRSARSLFVVERIKKGEILTPQNIRSIRPNNGLHPKFYDEILGKTAKKDLEFGYPL
                     SLDDIR"
     gene            complement(5680..>6066)
                     /locus_tag="RPW04_001735"
     CDS             complement(5680..>6066)
                     /locus_tag="RPW04_001735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295818.1"
                     /translation="KSLKDIIGGTKVDAILSWGVLHLFTPNIVVNLLSEFKNHLNKNG
                     KILVNFRTQNDSLKNDAINLEPNVYKVTKESHKDLLYTFYTLDMIKDLFEKADLKISS
                     IDKETFSQNNGDIQNEFYITEAVHNS"
BASE COUNT         2053 a          932 c         1150 g         1931 t
ORIGIN      
        1 atcaaattta ttttttaaat ttaaatatat attataataa tttgttagcc taaattttca
       61 ggttttatct tgtaaaatta caaaaagtaa cacaaaattt aaattttcag atattaaatt
      121 cagatttaat tataattcat gctaatttag ttataatccg taaattacaa aatttatcaa
      181 agataaaatt aaggaagtga agatggattt aagacaaagg gctttggact accacgaagg
      241 tggcaaaata gaaataaatg ttaaaaaacc ttgcaaaact gcagatgact taagcgtggc
      301 ttatagtcca ggagttgcag agccttgcaa agagatagaa gcggataacg aattagctta
      361 tagatatacg aataaaggca accttgttgc agttatcaca gatagtacag ccgtgctagg
      421 tcttggagat ataggcgctg ttgctggaaa gcctgttatg gaaggtaaat ccgttttatt
      481 taaaaaattc gcaaacgtgg atgcgtttga tatcgagctt gatgagcacg atccagacaa
      541 gatagttgag atctgcaaag ctcttgctcc aacatttggc ggtataaatt tagaagatat
      601 cggcgcacca aaatgttttt acatagagaa aaaacttcaa gagagcgtaa atatcccagt
      661 tatgcacgat gatcagcacg gaactgctat tataacgact gcaggactta tcaatgctct
      721 aaaaatcaca ggcaaaaaag ttggcgagat aaaagtcgta gttagcggaa gcggcgcggc
      781 tggaatcgca tgcgcgaaaa tgtatagaaa tcttggtgta aaacatatcg taatgttaga
      841 tagcaaaggc gttatacata ctaaaagaga aaatttaact cctgaaaaag ctgattttgc
      901 tatagatacg gacgctagaa ctttagctga ttcgatgaga ggtgctgata tgttcctcgg
      961 tctttcaaaa gccggtgttt taagcaaaga tatggttgct agcatggcat caaatcctat
     1021 aatatttgcc ttagcaaatc caactcctga gatcatgcct gaaatcgctc actccgtaag
     1081 agatgatata atgatgggaa caggaagaag cgactatcca aatcaagtaa ataatgtttt
     1141 gggatttccg tttatatttc gcggtgcgct agacgtgaga gctacaaaaa ttactgaaaa
     1201 tatgaaaata gcggcagcgc atgctttagc cgagctcgcc gaagaatacg taccagatag
     1261 cgttttagaa gcttatggcg aaaaagatat taaatttagt aaagattaca ttataccaaa
     1321 accatttgat cctagagttc ttttggtggt agccccggca gttgccgaag cagccgtaaa
     1381 agacggagtt gctttggtta aagattttga taaatcggct tatatagaaa agcttaaaaa
     1441 attattttaa ttaagtaaat ttgataatag ctatcttaaa aataggtagc tatttttaat
     1501 atttgtatat ccaaaataga gtaaaaattt tattacgaat ccgaataaaa ctaaattaaa
     1561 attactcaac cggtgcaaac tagcaccaaa aatgatctaa aaattataaa taaactactc
     1621 aaaaattcaa aaaatagatt tttcgagata aatttagttt ttctaaatgt tctttataat
     1681 atgtagatga actagatttc taaattttca attattcttt actttctata tgatttagta
     1741 taaattttct taaattattc atttgctaaa ttgcgtttga aattgtcaaa ttaagtaaat
     1801 ttacagtata attcaggcaa gaaagtaaaa acaataaagg aaaaagaatg caaaatataa
     1861 ggctaatatc gcatcctctt attgaacata aacttaccat tttaagagac aaaaataccg
     1921 atccgtttca gtttagaatg ttaattgatg agataactta tctaatgctt tttgaggcaa
     1981 gtagggattt tgagttaaaa gatactgagg ttataactcc agttgcgact acaaaatcaa
     2041 aaaaattagc tcagaaaata atgatatgtc cgattctaag agctgctctt ggtatgcttg
     2101 gtagcgtatt taaactactt cctgatgcta gcgtaggatt tttaggattt caaagagatg
     2161 aaaaaacatt aaaagcagag ttttactatg caaaacttcc aaaagatcat gccgaacgca
     2221 ttgcaatagt tatagatcct atgtttgcta caggcggtac tgctatagac gcggttcgat
     2281 ttttaaaaga aaaaggtgtg aaaaagatta aattcatatc tattttagcg gctcctgaag
     2341 ggcttaatag atttagcgaa gtctatcccg atgttgaagt ttatacagct gcgatcgata
     2401 gaggcttaaa tgaaaaaggt tatataattc cgggtcttgg agatgctgga gatagagttt
     2461 ttaacactgt ttattaggaa aaatatggtt tttggcaaaa ttgattatct aaatttactt
     2521 ccgtttcatg tgtttttgaa gtcttatcct ctacaaaacg ctgctaaaaa aagtattgaa
     2581 tttaaaaaag gcgtacctag caaattatgc aaagatctct attataggcg tatagatgcg
     2641 gctgttatct caagtataga aagcagacga agcaaatata aagtgcttga ttttggaatt
     2701 tgcgcgaaaa aagatgtaaa atcggtctta gtccgtaaaa atacaaaaag aagtttagat
     2761 ccggcatcaa tgagttcaaa tatgttaagt cgaattttaa aactagatgg agaggttata
     2821 ataggagaca atgcgcttat agagtatttg aagtgtggag aagacgagtt ttacgatatg
     2881 ggcaagatct ggaatcaaag aactggctta ccgttcgtat ttggcagatt tacttatata
     2941 aaaaataaaa atagttataa aaaaattatt aaaatttttt taaatagaaa tataaagata
     3001 ccaaaatata ttcttgataa ttatgcaatt agcagaggcg tgaaatctaa tgatatcata
     3061 tggtatctta aatttataag ctacaaaata ggtgtaaaag agaaaaaatc tcttaaaata
     3121 ttcttaaata aagccagaaa tcttaaattt aatccaaaca gtgtttaaat tcgtaacatt
     3181 attgaaaaaa taattggtat aaattctaaa gttaaacgaa gctttaaata tttttttata
     3241 taatagatta caaattttta atataggagc tgtaaatggg agtgcacgaa tacatcaatc
     3301 acacacttga acacatcaaa aaaacaagtc cggggcaaaa tacgttttta caagccgcga
     3361 ccgaagtttt acatagtctt gaacctcttc ttagcgcaga agataagtat ctaaaacata
     3421 aaatcataga tcgtatcgta atgccggaga gaacaacgat gtttagagta acttatatga
     3481 atgataagaa tgagccgtgt tctcactttg gttatcgtgt tgaattcaac tcagctcttg
     3541 gaccttataa aggtggttta agatttcatc catcagtttg cttagatata attaaatttc
     3601 ttggttttga gcaaattttg aaaaattcgc ttactgggct taatatgggc ggaggaaaag
     3661 gcggagctaa tttcgatcca aaagggaaaa gcgacggcga aataatgagg ttttgtcaat
     3721 cgtttatgaa tgaactttat aagctaatag gcgacgtaaa agacgtacct gctggcgata
     3781 tcggagtagg cggtcgcgag atcggatata tgtttggtca atataaaaaa ttaacaaatc
     3841 gatttgatgg agcccttact ggcaaaggtt tgagctgggg cggaagcctt gctagaacag
     3901 aagctactgg atacggttct gtttattttg cgaatgaaat gttaaaaaaa tcaggcggtt
     3961 ctttagaagg taaaaaatgc tcagttagcg gagcaggaaa tgttgctata tatactgtag
     4021 aaaagctgta tgaatttgga gcgcttccta ttactgtcag tgattcaacc ggatttgttt
     4081 acgacaaaga tggaatcgat actcagcttt taaaacgctt aaaagaggta gagagaaaag
     4141 gtcttagcga ctatactgat tttagaaaaa atgcggtatt tactccagtg aaagcatata
     4201 aagaaggtac aaacggtgtt tggagcgtac cttgcgacgc agcttttcct agtgctactc
     4261 aaaacgaact tcatttggtg gatataaaaa ctctttataa taacggttgt cgcttggttt
     4321 gcgagggtgc aaatatgcct agcactcttg atgctataga ttttatgatt agcaaaaaag
     4381 actttttatt cggtcctgct aaagcggcga acgcaggtgg cgttgctact agcggtttag
     4441 agatggctca aaatgcaagt atgcaaaaat ggagttttga agaggtcgat aaaaaactac
     4501 atgatataat gagaaatata tttaatgaga gttacgatac atcagtagag ttcggagatg
     4561 ccggaaacct tgttcttgga gcaaatatag caggatttag aaaagttgct gacgctatga
     4621 tagatcaagg atatgtttaa tagatatcta aatttggctg atattcagcc aaatttttcc
     4681 tcggcttcat aagtttatct tatatcgtct aagcttaaag gatatccgaa ttccagatct
     4741 ttctttgctg tttttcctaa aatttcatca taaaatttag gatgaagtcc gttattcggg
     4801 cgtattgagc ggatattttg cggcgttaaa atttcaccct ttttaatacg ttctactaca
     4861 aaaagcgatc tagcgcttct tctatttctt tcatttatac tataatccac gcttccaaga
     4921 gccttataag tatttctaac tgcgctactc atagctttaa actcatcttt atttaaagaa
     4981 aatccactat cctctccgcc taaagcgcgg tctatagtaa agtgtttttc tatcatgcta
     5041 gctcctaacg cgactgctgt tatcgggact tctaagctca tagaatgatc gctgagcccg
     5101 acttttacgc ccatagggga aaatctctta agcatatctt ttatagtgat tagattcata
     5161 tcttctatct ttgcaggata gcttgaagtg catttaagta tagttatgtc attgtttcct
     5221 acgcttttgc aagcatctat tgcttcataa atttcttcta ggcttgaaat tccggctgag
     5281 attatcatag gttttttaaa tttagcggcg tatcttatga gcggataatc tatcgcttca
     5341 aaagaggcta tcttatacat aggaacgtta atgctctcta aaaaatccac tgcactataa
     5401 tcaaacggag ttgagaaaaa gtctatcccg atctcatcgg cgtacgcttt tagctcgctt
     5461 tgccactccc aaggagtgta tgcttttttg tatagatcat ataagctttg tcctgcccaa
     5521 agaccgcctt cttgagtcat aaatatctca tctttgcaat ctatcgtgat agtatcggcc
     5581 gtgtaggttt gcacttttag ggcgtcggct ccggcgtctt ttgccgcttt tatgatttta
     5641 aaagctaagt ttttatctcc gcagtgatta gcagacattt cagctattat gtacggcctc
     5701 tgtgatgtag aattcatttt gtatatctcc gttgttttgt gagaaagtct ctttgtctat
     5761 acttgatatt ttcaaatcgg ctttttcaaa tagatcttta atcatatcta gagtataaaa
     5821 cgtatataat agatctttat gagactcttt cgttacttta taaacattcg gttctaaatt
     5881 tatagcgtca tttttcaaac tatcgttttg agtcctaaaa tttactaaaa ttttaccgtt
     5941 tttatttaga tgatttttaa actcgcttag caaatttact acgatatttg gggtaaatag
     6001 atgcaaaact ccccaagaga gtatcgcgtc tactttggtg ccaccgatta tatcttttaa
     6061 gctttt
//
LOCUS       DAPPKW010000098         6043 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.098, whole genome shotgun sequence.
ACCESSION   DAPPKW010000098 DAPPKW010000000
VERSION     DAPPKW010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 6043)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6043)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6043
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.098"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(176..1477)
                     /locus_tag="RPW04_001736"
     CDS             complement(176..1477)
                     /locus_tag="RPW04_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDX6295819.1"
                     /translation="MKTKIVITALLPICIFANDISLSTAYELALSNDEEVKASMYENL
                     ASSERRKQATSAMLPSIDAQILYNGERYDKSSGRSGKQRMDETFTKYGVNLTQPLFRP
                     ELWYQRKQEVLRESGYSIMYDGSKQGLARKVAEAYFKLAYANESLKLAKSYESANKAK
                     YDQMQKSLDMGLANKMDTLEAKVRYDEAILDVNKALRQIEVAKLSLAKYVGEEVGVKN
                     SFENMDLSFFSNLNLSPYENIFANLDYKQSEISTQIATEEKNKRMTGVLPTVDFSVGF
                     SNSDYKDDARFGDEDNKVETMIRFTMPLFKSGLTIERIQEGELLKMSSMSKQLDMQKK
                     VAIEQKQAISDFRNYLQEANIVRNSLEHARVYEQAIERGYEEGLKNIVDLLDARARVY
                     KTKADALNAGYQLILGYLNLEYLIGNISIDTIRNLERAFNY"
     gene            complement(1467..2750)
                     /locus_tag="RPW04_001737"
     CDS             complement(1467..2750)
                     /locus_tag="RPW04_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HDX6295820.1"
                     /translation="MVLKSESGTVKLGLFMILLLVGIFGVWMGTAPLNSAAVAPGQVG
                     VLSNKKVVQHLEGGVVDKIYVKDGDVVKKGQVLIEIKNVRLNSELDIVKSEYLQTSVL
                     VSRLEAQRDDKDQIEFSNDVKSYPDFESASKGQISIFNEQNKLLKDEITILNQRIDQL
                     RKQIEGINAIVDAKKQRVESLNEETKEWERLFKEQLTDKIRLRDIQRERTAAGGEIAS
                     GISDIAKLNVQITETKQQILFRERTFKEDVLKKYEEAKLKLTDLSARLRALDDQQERA
                     LVKAPVDGIVVELATHTIGGVVRPGESIMSIVPDDSDYIMEAKMHITDIDKVHVGLPA
                     DIRFSAFNSKTAHVIEGEVTYVSADTLKDSHGNPYYEIKAKLTKKGIEEVKKNGFFLV
                     PGMPAEIIVKTGERTVLSYIIKPFTDMFQRAFNED"
     gene            complement(2750..4501)
                     /locus_tag="RPW04_001738"
     CDS             complement(2750..4501)
                     /locus_tag="RPW04_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HDX6295821.1"
                     /translation="MRANEPKISELKETIKKSKNCIVYAAIFSFFVNLLMLTPPLYML
                     QLYDRVVTSRSESTLFFLTLIVLFLFITMAIFEILRSRILIVFGNQIDLNLTDRIYDA
                     IFKLASRVPGRVTSQAMGDLNAIKQYMSTNGIFAFLDAPWLPVYIAILFVFHPWYGWF
                     AIAAAIILFGVALLNEKATKDGLKKSNDTYKNEMRLIDMNLRNSEVINAMGMNNNLKK
                     IWKNKHHTFLNSHSDASIKAGVYTNISKATRVTSQSMMLGLGAYLVLKMEVSPGMMIA
                     GSILLGRALAPLDILIASWKSYKNTKESYERLDKFLHDFPVEKDKLSLPDPRGDIACE
                     AISLIPPSAKQPSLIGVSFALDAGDMCAIIGPSAAGKSSLARAILGIWPVAHGVVRVD
                     CADINQYYSDALGGFVGYLPQDVELFEGTIAENIARFGELDSVAVVEAAKSANVHDMI
                     LRLPDGYDTKIGLGGMSLSGGQRQRVALARALYKNPKIIVLDEPNASLDEEGERALYA
                     ALLAMKGKATIILITHKLNVLQAVDKIAVLNAGQLVYFGERDAVLAKLSGNTAPATKQ
                     VKTAAASISLDDAKEDE"
     gene            complement(4488..5630)
                     /locus_tag="RPW04_001739"
     CDS             complement(4488..5630)
                     /locus_tag="RPW04_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SapC family protein"
                     /protein_id="HDX6295822.1"
                     /translation="MGRKLRLIDSGKVAVRQKGDFFQNFDEKSLYEDVLHMVAHKYSV
                     QLYGYILNNNEVFIFLECEKLSKFMQIVNSSFIRKRNNYNVKNSNKKPDLENYSQNNS
                     QNSREIRRYEVTQVFADDIDPILAYIAKNSGVVFKKTVNKELSLDKKIEIEKFRKRNI
                     MKIEAIDTKKHSELMYHKDAVPNSPFSEIVAGEAGQCEHNFSIVFTNDVVPKLIVMLG
                     KNENLIINENYNGYIPANVQNYPFFLVDIEGKGVLCIDTQAEQLQGEGIKLFENEKPT
                     EFMENLIKAMQNYNIEQQKTKIAMQEIKKSGILVNKELSVNINGKKHTLIKGFSVVSK
                     KKLNELDDATLADFVRRGYMELIYTHLRSLSNLENLASRIVQNESK"
BASE COUNT         1744 a         1207 c          814 g         2278 t
ORIGIN      
        1 aaaataaata aatagaacaa agatgaataa actattaaaa acaatggaaa tttaaaatat
       61 taaaaggtga aagagataaa atattaaaag gtgaaagaga taaaatatta aaagaataag
      121 aaagatattt aggctaagtt atttagacct agccttatat aaatttagaa ataagctaat
      181 agttaaacgc tctttctaaa tttctaatag tatctatgga tatatttcct attagatatt
      241 ctaaatttaa atatcctaaa atcaactgat atccggcgtt taaagcgtct gctttagttt
      301 tataaactct agctctagca tctaaaagat cgactatatt tttaagtcct tcttcatatc
      361 cgcgttcgat ggcttgctca taaactctag catgttcgag agaatttctt actatatttg
      421 cttcttgcaa gtagttccta aagtcgctta tagcttgctt ttgttctatc gctacttttt
      481 tttgcatatc tagctgtttt gacatgctag acatctttaa aagttcgcct tcttgtattc
      541 tttctatagt cagaccgctt ttaaacaaag gcatagtaaa gcgaatcata gtctcgactt
      601 tattatcttc atcgccaaac ctcgcatcat ctttgtaatc cgagtttgaa aatcctacac
      661 taaaatctac ggtcggaaga actccggtca ttcttttatt tttctcttca gtagctattt
      721 gagtagaaat ttcactttgt ttataatcca aatttgcaaa aatattttca tatgggctta
      781 aatttaaatt actaaaaaag ctaagatcca tattttcaaa actatttttt actccaactt
      841 cttcgcctac atactttgca aggcttagtt ttgctacttc tatttgtctc aaagctttat
      901 ttacgtctag tatcgcttca tcatagcgca ctttagcctc aagagtatcc attttatttg
      961 caagtcccat atcaagcgac ttttgcattt gatcgtattt ggctttattt gcactttcat
     1021 aactcttagc caattttaga ctctcatttg cataagctag cttaaagtat gcttctgcga
     1081 cttttcttgc caagccttgc ttagaaccgt catacattat agagtaaccg ctctccctta
     1141 aaacctcttg ttttctttga taccaaagtt cagggcgaaa cagaggttga gtgagattta
     1201 caccatattt cgtaaaagtt tcatccatcc tctgttttcc tgatctgccg ctacttttgt
     1261 catatctttc gccattatat agtatctgag catctatgct aggtaacatt gcggaagtgg
     1321 cttgttttct tctctcgcta gatgctaaat tttcatacat actagctttg acttcttcat
     1381 cgttactaag agctaattca tatgctgttg aaagacttat atcattagca aatatacata
     1441 taggaagcaa cgctgttata actattttag tcttcattaa atgccctttg gaacatatct
     1501 gtaaatggtt ttatgatata gcttaatact gttctttcac ctgtttttac tatgatttcg
     1561 gcaggcattc cgggaactag aaaaaatcca tttttcttaa cttcttcgat accttttttg
     1621 gtcaatttag cttttatttc atagtaagga tttccatgag aatcttttag cgtatctgct
     1681 gatacgtatg taacttcacc ttctataaca tgggcggttt tgctgttaaa tgcactaaat
     1741 cttatatctg caggcaaacc tacatgaact ttgtctatat ctgtaatatg catttttgct
     1801 tccattatat agtcgctatc gtccggaact atactcatta tagattcacc cggacgtaca
     1861 acgcctccta tagtatgagt agccaactct actactatac catcaacagg agcttttact
     1921 aatgctcttt cttgttgatc gtcaagcgct cttaatctag cactaagatc ggttaatttt
     1981 aatttagcct cttcgtattt tttcagcaca tcttctttaa atgttcgttc gcgaaacaaa
     2041 atttgttgct ttgtttcggt gatttgaaca tttaattttg ctatatctga aattccagat
     2101 gcaatctcac cgcctgctgc agttctttct ctttgtatat ctcttaatct gattttatct
     2161 gttagttgct ctttaaatag tctttcccac tcttttgttt cttcattcaa ggactcgact
     2221 ctctgttttt ttgcatctac tatagcattt atgccttcta tctgttttct tagctggtct
     2281 attctttgat ttagtatagt tatctcatct tttaaaagct tattttgttc attaaatatg
     2341 cttatttgtc cttttgatgc agactcaaaa tccggataac tcttcacatc attactaaat
     2401 tctatttggt ctttatcgtc tctttgtgcc tctaagcggc ttactagaac actagtttgg
     2461 agatattcgc ttttgactat atctaattcg ctatttagtc taacgttttt tatctctatt
     2521 agtacttgcc ctttttttac tacgtccccg tcttttacat atattttatc tactacgccg
     2581 ccctctaaat gctgaacaac ctttttattg cttaaaacac cgacttgacc cggtgctacg
     2641 gcggcgctat ttaacggtgc ggttcccatc cacactccaa aaatacccac cagcaacaat
     2701 atcataaaca gacctagctt taccgttccg ctttcgcttt ttagtaccat tattcatctt
     2761 cctttgcatc atctaagctt atactagcag cagctgtttt tacctgttta gtagcaggag
     2821 cggtgttacc tgagagtttg gctaatactg catctctctc gccgaaatac accagctgac
     2881 cggcatttag cacggctatt ttatctacgg cttgcagcac gtttagctta tgtgttatta
     2941 agattatagt agccttacct ttcatagcaa gaagtgctgc atatagcgct ctttctccct
     3001 cttcgtccag acttgcgttt ggctcatcta gaactataat ttttggattt ttatacaatg
     3061 ctctagccaa agctactctt tgtctttgac caccgctcaa actcataccg cctaatccta
     3121 ttttagtatc ataaccgtcc ggaagtctta gtatcatatc atgtacgttt gcgctcttag
     3181 ccgcttctac tacggcaaca ctatcaagct cgccaaatct tgctatattc tcagctatag
     3241 ttccttcgaa taactctacg tcttgcggta aataacccac aaatcctcct aaagcatcgc
     3301 tatagtactg atttatatct gcgcaatcca ctcttactac tccatgagcc accggccaaa
     3361 ttccgagtat agctctagct aatgagcttt tacctgctgc actaggtcct attatagcac
     3421 acatatctcc ggcatctagt gcaaaactta cgccgataag gctcggttgt tttgcgcttg
     3481 gcggaatcaa actaatggct tcacaagcta tatctcctct tggatcaggt aaacttagtt
     3541 tatctttttc aacaggaaaa tcatgtaaaa atttatccag tctctcatag ctctcttttg
     3601 tatttttata gcttttccaa ctagctataa gtatatcaag cggtgctaaa gccctgccta
     3661 atagtattga tccagctatc atcattcctg gacttacttc catttttaat accaaatacg
     3721 caccaagtcc tagcatcata gattgagatg ttactctagt ggcttttgat atatttgtat
     3781 atactcctgc ttttatactt gcatctgaat gcgaatttaa aaaagtatga tgcttgtttt
     3841 tccatatttt tttaagatta ttattcatac ccatagcgtt tataacttct gagtttctta
     3901 aattcatatc tataaggcgc atctcgtttt tatatgtgtc gtttgacttt ttaagtccgt
     3961 cttttgtggc tttttcattt agtaaagcta ctccaaaaag tattatggcg gcagctatag
     4021 caaaccatcc gtaccacggg tgaaatacaa ataaaatagc tatatacaca ggcagccaag
     4081 gagcatccaa aaacgcaaat attccgtttg tgctcatata ctgctttata gcatttagat
     4141 cgcccatagc ctgagaagtt actctaccag gaactctact tgctaattta aatatagcat
     4201 cgtatattct atctgttaaa tttaaatcta tttgatttcc aaatactatt agtattctag
     4261 atctaagtat ttcaaatatc gccattgtaa taaacaaaaa cagtactata agcgttaaaa
     4321 aaaacagtgt gctttcgctc ctgctagtta ctactctatc atacaattga agcatatata
     4381 aaggaggtgt aagcataagt aaatttacaa aaaagctaaa aatcgcagca taaacgatac
     4441 agtttttaga cttttttata gtctctttta attcacttat ttttggctca tttgctctca
     4501 ttttgcacta tcctacttgc tagattttct aaatttgaaa gacttcttaa atgagtatat
     4561 ataagctcca tatatccgcg tcttacgaaa tccgccaaag tcgcgtcatc aagctcattt
     4621 agctttttct tacttactac ggaaaatcct tttataagag tatgtttttt accgtttata
     4681 ttgacgctta gctctttatt tacaagaatt ccggactttt ttatctcttg catagctatt
     4741 tttgtttttt gctgttcgat gttataattt tgcatagctt ttatgagatt ttccataaat
     4801 tcagtcggct tttcattctc aaataacttt attccctctc cttgtaattg ctctgcttgc
     4861 gtatctatac acaatactcc ttttccctct atatccacaa gaaaaaacgg ataattttgc
     4921 acatttgcag gtatatatcc gttataattt tcattaatta taagattttc gttcttgcct
     4981 agcataacta tgagttttgg cacgacatca tttgtaaaaa ctatactaaa gttatgctcg
     5041 cattgtcctg cttcacctgc tactatctca ctaaatggac tgtttggtac tgcatctttg
     5101 tgatacatta actcactatg ctttttcgta tctattgctt ctattttcat tatattcctc
     5161 tttctaaatt tttcaatttc tatcttttta tcaagactta gctctttatt aaccgtcttt
     5221 ttaaagacaa cgccgctatt tttagctata taagccaaaa taggatctat atcatcagca
     5281 aaaacttgag ttacctcata tctccttatc tctctactat tttgactgtt attttgagag
     5341 taattttcta aatctggctt tttattgcta ttttttacat tatagttatt acgctttctt
     5401 ataaaagaac tattaactat ctgcataaat ttagataatt tctcgcattc taaaaatata
     5461 aaaacttcgt tattatttag tatatatccg tacagttgca cgctatattt atgtgctacc
     5521 atatgcaata catcttcata taacgacttt tcatcaaaat tttggaaaaa atcacctttt
     5581 tgtctcacag caacttttcc agaatctatc agtcttagtt ttctgcccaa aacccttact
     5641 ccgagattaa tttacttctt atgtttaatg attttatcat ctatgatcac ttttatataa
     5701 tttctatata tctatataat tataaaaagc aatcaaagtt atacttcgta agcaaaaagt
     5761 aacaatttac taaaatcata ttacaattta ccacaaaaaa ctatttttct tgccaaaaaa
     5821 tgcattttac tgcatatata cttaagtata actgaaaaag tgccagacta aatgcaaaaa
     5881 tttaattttt tttcaaaaaa taacatatag aaattgattt tctaataatt ttaaaaagcg
     5941 aaatttgcat aatttaaatg aattaaattt gaattttata aaaaattatg ttataattcg
     6001 cgcagtattt gcaaaaatac tatcgatagt aaggtaagca atc
//
LOCUS       DAPPKW010000099         5974 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.099, whole genome shotgun sequence.
ACCESSION   DAPPKW010000099 DAPPKW010000000
VERSION     DAPPKW010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5974
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.099"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            203..2163
                     /locus_tag="RPW04_001740"
                     /pseudo
     CDS             203..2163
                     /locus_tag="RPW04_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732310.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
     gene            2324..2875
                     /locus_tag="RPW04_001741"
                     /pseudo
     CDS             2324..2875
                     /locus_tag="RPW04_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732311.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohemerythrin"
     gene            complement(2883..3260)
                     /locus_tag="RPW04_001742"
     CDS             complement(2883..3260)
                     /locus_tag="RPW04_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TM2 domain-containing protein"
                     /protein_id="HDX6295823.1"
                     /translation="MDVSAITMYMQDKVPSQGLLLLQDKLKVASQEKLQSIALIPLKN
                     PLIGLILGVLFGGFGVDRFYKGDVILGIAKLVLTIIGWMTVLIVIGYIFLIIVFVWVI
                     ADFFLVYKGIKQDNLNKIIQILA"
     gene            complement(3443..3961)
                     /locus_tag="RPW04_001743"
     CDS             complement(3443..3961)
                     /locus_tag="RPW04_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009295104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDX6295824.1"
                     /translation="MSKEKDVYLNEEIRASEVRCVGDDGTAYGVISRGEAQDIANRMG
                     LDLVLIAPDAKPPVCKIMDYGKFRYQQEKKQKEAKKKQKVIEVKEIKLSVKIAQNDIN
                     YKIKHAQEFLEEGKHVKFRVFLKGREMATPDIGVVMLERIWELVKDYADRDKVPALEG
                     RYVNMLVTPKKG"
     gene            complement(3958..5778)
                     /locus_tag="RPW04_001744"
     CDS             complement(3958..5778)
                     /locus_tag="RPW04_001744"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002343664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDX6295825.1"
                     /translation="MMSDIIAYKVNEQIVDTQSYCGNGGEEIFFDNSKEALDVIRHSC
                     AHLMAAAIKELYPNAKFFVGPCIEDGFYYDMRVSKSDGEKLGESDLEEIEKKMKELAL
                     AKIDIVKFNSTKSEVAAKYASDDLKQEVLKRIPDGVVSLYSQGNFEDICRGPHVPNTI
                     FTRFFKLTRIAGAYLGGDENREMLTRIYGTAYADKESLKEHIHIIEEAKKRDHRKLGA
                     EMKFFTFDDTIGVGLPIWLPNGARLRSRLEHKLYRTHRLRGYEPVRGPEILKSDAWKI
                     SGHYANYKENMYFTVIDEQEYGIKPMNCVGHIKVYQSEIRSYRDLPLKFFEYGVVHRH
                     EKSGVLHGLFRVREFTQDDAHLFCMPSQIKENVYEILSFVDTLMSAFGFTYEMEISTK
                     PAKAVGDDAVWEIATKALKDALDEKGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCG
                     TIQVDFNLPARFDLGYIDENNERKQPVMLHRAIMGSFERFIGILLEHTAGELPFWIAP
                     TQVVIIPISNEHHKYANEVHSLLLDMDVDSEIFNKNETLNKKIRTAEKQRVPMIIVLG
                     DNEVTNRGVALRDRRAREQKDMSLDEFLGFIQSKLNEVNI"
BASE COUNT         2177 a         1020 c          877 g         1900 t
ORIGIN      
        1 tataaaattt aataaactaa acaatactat tttttagttt aaattatata ataaatttaa
       61 aaattaaata aatattgaat gataataaat aatttctttt tatttattta ataaagaatt
      121 tacaagtaaa gatatatatt ttaagcttat ttaaaagata gattcattag aataaattaa
      181 ttttaatgac aaaggataaa aaatgttgtt tttcaacaaa agcatagcaa gcaaaatctc
      241 cataggcgta tccttactct ttgcaatagc actgataagt tttacatata tcaattatat
      301 agattctaga gataactcta taaaacttct ctctttagaa aggcaaaaag cagttgcggg
      361 atctgaaaat atattagata tcgagctgga attcgatgcc aataaagcag agcaaatatc
      421 aaaacagata tcaaaaccga atttaacccg cgaagaagtt caaaatatac taaaaactac
      481 aaataaaata acggaatttt cgtctataca tatggtatat gaatcagacg gaactatata
      541 caaatcagac ggaactataa aagaagcaaa tagtatatat gatgcgagaa aatatccatg
      601 gtaccaagaa gctttaaaga aaaataaact catcatcaca gatccttatc aaaatttaga
      661 taataataca tatataactt tagcagctcc gatacatgta gaaaataaat ttataggagt
      721 tttaggtata aatttagaag ccgaaaattt aagtaaaaaa attataaagc ttggagagac
      781 aaaaggcgga tatataatga tattagattc tgaaggaaaa atcattatgc atcaagaaaa
      841 aaatcaaata ggaaaatcgc caaactctac tctaagtctc gtaaataact ttcaaaataa
      901 aaatattgac aaatacggaa tgatcagcta cacaagatct aacggaaatc aaaatatcgc
      961 agattgtatg aattcaaaac atagcgactg gataatttgc gcatctatgg ataaaaatat
     1021 ttttgaagaa ggtataaata atatactaaa aaaacaacta tggctgtctg cattatatat
     1081 tattatctca tcgtttatag tattaattct agccaaaaga tatttaaaac cgataaataa
     1141 tatagtattt ggtctcaaaa atttctttga tttcttaaat tataaaaacg ataatcctaa
     1201 agatataagc ttaaaatcaa acgatgagtt tggagttatg gctacaatga taaatgataa
     1261 tataagtatc attaaaaatg ctattaaaaa agacgctcaa ttagttagcg aatctttgca
     1321 aaaagtaaaa gaggttgagg atggaaattt aaaagcaaga atagttaatg ttccggtttc
     1381 accgcagcta aacaaactaa aagatgtttt aaactctatg ttagaagtgc tgagcaaaaa
     1441 gtcggaagcg atataaatgt tatccaaaaa acattcgatg attttaaaaa tcttgatttt
     1501 acatctaaca tacctaatgc tagaggagaa gttgaaaaga taataaatac tttaggaaaa
     1561 aatataacta aaatgttaaa agataaccta aaacaagcag atatcctaca agcaaaagca
     1621 aataacttac aagattttgt aattatgtta aatgagagct caaaaagtca agctagctca
     1681 ctaggagaaa gtgcagctgc gattgaagag atgagtaatt ctatgacttc gattaacgaa
     1741 cgcactatgg aagttataaa acaatcagaa gatataaaaa gtattataac aataattaga
     1801 gatatagcag atcaaacaaa cttgctagca ttaaatgcgg caatagaagc agcgcgcgca
     1861 ggagatcacg gcagaggatt tgcggttgtt gcggacgagg tacgaaaact tgccgaaaga
     1921 acagggaaat cgctaggaga gattgaggca aacgtaaata tacttagtca aagcataaat
     1981 gatatgagtc aaagcatcaa agagcaaacc gaaaccatga atcagataaa ccaatctgtt
     2041 gctaacgtag atgaattaac aaaacaaaat gttgatatag ttaatgatac aaacaaaata
     2101 tctattgaag tagaaaatat agcaaattca atagtcaatg atgcgaaaaa aaataaattt
     2161 taacataaat ttaattgcat tttaattgct tatcaaagac gtctttagtc atatatttgg
     2221 ctaaagatat actttaattt atataattaa atttcataaa agtaacatta aaaataaatt
     2281 tactataatt acgtaattat attatacaaa aaagggtagg gttatgatac cggtatggga
     2341 cgataaatat agtgtaggaa ataatggtat agataaacag cacaaaaagc tatttgaact
     2401 tgcaaaaaaa tcatatattt atgctaataa aaatatctca agagaagata ttagaaatat
     2461 aataactgaa ttttttgagt atatgaagga gcattttaga gatgaagaga tctatatgga
     2521 gcttatagaa tatccatatt tagaatagca ctcatctatc cataaagata ttataaatag
     2581 tatgtcaaat ctcataaaaa ctgcaaaaaa tgtaaatgat ctaaaagaaa atttagttat
     2641 tatagctgaa aaatggcttc ttgagcatat acttcatcat gataccagaa tcaaagaatg
     2701 gagaaagtta caacttagca atcaaaataa accaagcaca acaaaaaaat acagatatac
     2761 atgtggttgt ccaaataaaa cgcacatagt atctataacc atccacaaca aaatcataca
     2821 aggcaaaaaa tactcttgca tgacttgtaa taatgagata aaatttaaat cttaagagta
     2881 aatcatgcga gtatctgaat tattttattt agattatctt gcttgatacc cttatatact
     2941 agaaagaagt cggcaataac ccacacgaag actattatca aaaatatata acctatgacg
     3001 ataagcacag tcatccatcc tatgatagtc agcacaagtt tagcgatacc aagtataaca
     3061 tcacctttat aaaacctatc aacaccaaat ccgccaaata aaacacctaa tataagaccg
     3121 atcagtggat ttttcaatgg aattaaagca atactttgta gcttctcttg tgaagcaact
     3181 ttaagcttgt cttgcaacaa cagtagacct tgagatggaa ccttatcttg catatacatt
     3241 gtaatggcgc ttacgtccat attgtcctcc ttaaaataaa ttcaattcta tttaacttta
     3301 ttattgtatc aaaaaaatag cattaaaata tataaattta aaaataatag ataactgtgt
     3361 aaaaatttat ttaaatttaa tttattgttt tatttatgaa gaagtggcaa ctagcctggg
     3421 ctagtaacca caaggctaaa gtttatccct ttttaggagt tactaacata tttacgtaac
     3481 gtccctctaa agcaggtact ttatcgcgat ccgcgtaatc ttttacaagt tcccaaattc
     3541 gctcaagcat aacaacgcct atatctggag tagccatctc tcttcctttt agaaaaactc
     3601 taaatttaac atgcttgcct tcttcaagaa attcttgcgc gtgcttgatc ttgtagttaa
     3661 tgtcgttttg ggctattttt actgagagtt ttatctcttt tacttcaata actttttgct
     3721 tcttttttgc ttctttttgc ttcttttctt gctgataacg gaatttaccg tagtccatta
     3781 tcttacaaac cggcggttta gcatcgggag ctataagaac caaatcaagc cccatacggt
     3841 ttgcgatatc ttgagcttct cctctactta taacaccata agcagtacca tcatcaccga
     3901 cacatcttac ctcactagca cgaatttctt cgtttagata aacatccttc tctttgctca
     3961 aatattcacc tcatttaatt tagattgaat aaagcctaaa aactcgtcta agctcatatc
     4021 tttttgctct ctagcacgtc tatcacgaag tgctacacct ctgtttgtaa cctcattatc
     4081 tccaagtacg attatcatcg gtactcgttg tttctctgct gtccgtattt ttttatttaa
     4141 agtctcattt ttattaaata tttcactatc tacatccata tctagaagca aagagtgtac
     4201 ctcatttgca tatttatggt gttcattact aataggtatg ataacaactt gtgtcggcgc
     4261 tatccaaaat ggtagctctc cggccgtatg ttcaagcaaa attcctataa atctctcaaa
     4321 actacccata atggcacgat gcagcataac aggctgtttt ctttcgttat tttcatctat
     4381 ataaccaaga tcaaaacgag caggcaaatt aaaatcaacc tgtatagttc cgcactgcca
     4441 tttacgctta agcgcatctg tgatttttat atctatcttt ggtccgtaaa atgcgccgcc
     4501 gccctcgtct ataccatatt tcaatccttt ttcatcaaga gcatctttaa gcgctttagt
     4561 agctatctcc caaacagcgt catcgccaac tgcttttgca ggttttgttg aaatttccat
     4621 ttcgtaagta aacccaaatg cactcatcaa agtatcgaca aaacttagaa tttcatacac
     4681 attttctttt atctgacttg gcatacaaaa tagatgcgca tcatcttgag taaattcgcg
     4741 aactctaaaa agaccgtgta aaacaccgct tttctcatgt ctatgaacta cgccatattc
     4801 aaaaaattta agaggcaaat cgcggtaact gcgaatttcg ctttgataga ctttgatgtg
     4861 tcccacgcag ttcatcggct ttataccata ttcttgctcg tcaatcacgg taaaatacat
     4921 attttctttg taattcgcgt agtgaccact gattttccaa gcatcgcttt ttaaaatttc
     4981 aggaccgcga acaggctcat aaccgcgaag tctatgagta cgataaagct tgtgttctaa
     5041 acgacttcta agccttgcgc catttggcag ccatatagga agtccaacac ctatagtatc
     5101 atcaaatgta aaaaatttca tctctgcgcc gagttttcta tgatcgcgct ttttagcctc
     5161 ttcaatgatg tgaatatgct cttttagact ctccttatcg gcgtaagcgg ttccataaat
     5221 tctagttagc atttcgcggt tttcatctcc gccaaggtat gctccggcta ttctagttag
     5281 tttaaaaaat cttgtaaaaa tcgtatttgg tacgtgaggt ccacgacaaa tatcttcaaa
     5341 gtttccttga gagtacaagc tcacgacgcc atctggtatg cgttttagaa cttcttgttt
     5401 tagatcgtcg cttgcatatt ttgctgcgac ttctgatttt gtcgagttaa atttaactat
     5461 atcgatttta gctaatgcta gctctttcat ctttttttct atctcttcaa gatcgctctc
     5521 acctaacttt tcgccgtcgc ttttactaac tctcatatca tagtaaaatc cgtcttctat
     5581 acatggtcct acgaaaaatt tagcgtttgg atatagctct tttatcgctg cggccataag
     5641 atgcgcacaa gagtgtctta taacgtctaa cgcttctttt gaattatcaa aaaatatctc
     5701 ttcgccaccg tttccacagt aactttgggt atcaactatt tgctcattta ctttatatgc
     5761 aattatatcg ctcattatat tcctctttct accggttgct cttccataca acgaaagaac
     5821 aaaatatctg attttatcta attgtatttt aagttaaact gaattttagg attatcaaag
     5881 cttactaatg ccgtatttta ggctaaattt aatcaaattg ttaatattta gttgcattta
     5941 cgatttttaa ttataaattt agacagacaa ttaa
//
LOCUS       DAPPKW010000100         5631 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.100, whole genome shotgun sequence.
ACCESSION   DAPPKW010000100 DAPPKW010000000
VERSION     DAPPKW010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5631
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.100"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..869)
                     /locus_tag="RPW04_001745"
     CDS             complement(<1..869)
                     /locus_tag="RPW04_001745"
                     /EC_number="2.6.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HDX6295826.1"
                     /translation="MIKAALNSFQNTPFIAIISYDKPDDSIICSPQNAIKLGIKFKLN
                     AVNQTPISYFLEKYPISFDEYKKSFDKVINHQRNGNSYLLNLCFKTKIKTNLNLEDIY
                     NHSNAAAVIYKKDDFVCFTPEPFVVIKDGFIHTFPMKGTINADIPNAKELLLNDQKEF
                     SEQAMMTDLMRNDLNMVATDVKVERFRYIERVKNLYQTSSHISGKLRKELKLGDIFSK
                     LLPAGSITGTPKIQTCKIIKECENEPRGFYSGVFIYFDGKICRSFVMIRFVKQDDNGL
                     SFFSGGGITTRSDV"
     gene            complement(896..1168)
                     /gene="rpsO"
                     /locus_tag="RPW04_001746"
     CDS             complement(896..1168)
                     /gene="rpsO"
                     /locus_tag="RPW04_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDX6295827.1"
                     /translation="MALDSAKKAEIVAKFARKSGDTGSPEVQVALLTTRISELTGHLK
                     INKKDFSSRLGLLKLVGRRKRLLKYLKAKNYESYTKLIAELGIRDK"
     gene            1340..1744
                     /locus_tag="RPW04_001747"
     CDS             1340..1744
                     /locus_tag="RPW04_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HDX6295828.1"
                     /translation="MLFTKASEYALLSLILLSQSNSPKDVDTMSTELGISKSFLAKIL
                     QNLAKEGILNSFKGANGGFILANKPANISIKKILESAEKRKASVFECSNARSDCPSNK
                     GDICKMWPMFNSLQLKVDDFLDNISLADIIKK"
     gene            1771..3918
                     /gene="flhA"
                     /locus_tag="RPW04_001748"
     CDS             1771..3918
                     /gene="flhA"
                     /locus_tag="RPW04_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HDX6295829.1"
                     /translation="MVAPFLAPFVKAKSLTVVFVIIAILAIIIVPLPSPVLDFFLALS
                     LSISVLIILISIYIPKPTDLSTFPTLILIITLFRLSLNIATTRMILSEGHNGPEAVSE
                     IIASFGQFVVGGNYVIGIIVFCILVLINFMVVTKGSTRVSEVQARFTLDAMPGKQMAI
                     DADLNAGLIDEQTARSRRQEIIGEANFYGAMDGSSKFIKGDAVAGIIITIINIIGGFL
                     IGTFQHDLDMANAAQTYTILTIGDGLVSQIPGLITSTATAIIITRASKDEDNFAEGVI
                     SQLLGEYKTLLIVGFILFVFALVPGLPTFSLGFMAILFLSIGYIMKQTEEGNLDFSNI
                     NKDEKKPQKQGSSTSADTGGDIKPAKKSEEEIAKEEQIKIDDILKIEILELDLGYGLL
                     KLADGDLIERIRAMRRNIAGLLGFLMPKIRIRDNLQLPPNEYRFKLKGVVIGQGVIYA
                     DKFLAMDSGYVSSDIDGIATKEPAFGLDALWIDQGLKEDAILSGYTVVDPASVISTHM
                     SELVKQNASELLTKQEVQNILDKVKSEYPVVVEDTLKVASVGLIQKVLKTLLKDNIPI
                     KDMLSILEAVGDVSEVSKNLDMIIEHVRAALCRVITSLYADEKGQLNFYILDAPAQQK
                     LIDSLNYKDGAYHLMINVAQTSAIVNALRQKRANRNISEQGDMLLCVEPSIRKFIANI
                     VQNFAIDIVILSFAEIAPNTQFETLGVIEIPEL"
     gene            3928..4944
                     /locus_tag="RPW04_001749"
     CDS             3928..4944
                     /locus_tag="RPW04_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-to-5' oligoribonuclease B"
                     /protein_id="HDX6295830.1"
                     /translation="MKIYHLSHTDLDGYSAQLVTSFYLKNIKFYNSNYGKEIDDKFAH
                     ILSQIGDEKAIILITDLNLTIQQCAYYENLISDKNIKLILLDHHQTGLECADKFGWYY
                     MDSKRCATKITYDFFSSMFGADERLESYCNVVNAVDIWLKDDPNFELGKVCMGIIAGA
                     REINKVLFEDKHMEYMFYLMNSFMEFIGQNNAHIKLDNEIHQIKKAFFKFKNDDTLSN
                     LNSSYLVRLLSFEKDKFTIDYRGHKGILTHNIGSTSIIGNDFLVANPDYDFFLDVTSK
                     KTFSFRANGNLDVSLMAKELVDGGGHVNASGGFFTGFKDSYNYELVKSQIIQLIEKKT
                     GVVK"
     gene            4941..5174
                     /locus_tag="RPW04_001750"
     CDS             4941..5174
                     /locus_tag="RPW04_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295831.1"
                     /translation="MKDYENEITQEEMSYELDIMMQGMLYFAGVKKDKLLDACDIYIE
                     NIDDVLENSEAQGVGEVIEVIEFMKKNYKELFN"
     gene            complement(5344..5598)
                     /locus_tag="RPW04_001751"
     CDS             complement(5344..5598)
                     /locus_tag="RPW04_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009294123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDX6295832.1"
                     /translation="MIKVSNIFNILHNAVESQNLGNKISQSQMAERLGVSMRTYQDWR
                     LGTTNPQAAMAICKMLCELDDEEALHTIKKIKKALGNRFE"
BASE COUNT         1914 a          815 c         1021 g         1881 t
ORIGIN      
        1 acgtcacttc tagttgttat acctccgccg ctaaaaaatg ataatccatt atcatcttgt
       61 tttacaaatc ttatcatgac aaaactcctg caaattttac catcaaaata tataaaaact
      121 ccactataaa atcccctggg ttcattttca cactctttta tgatcttgca agtttggatt
      181 tttggagttc ctgttatgga accagcaggt aaaagtttac tgaaaatatc gcctaattta
      241 agctcttttc gcaactttcc gcttatatgc gagctggttt gatataaatt tttcacacgc
      301 tctatatatc taaaacgctc tacttttaca tctgtggcta ccatgtttag atcatttctc
      361 ataagatctg tcatcatagc ttgttcgcta aattcctttt gatcatttaa aagcaactct
      421 tttgcatttg gtatatcggc atttatcgtg cctttcatag gaaacgtatg gataaatccg
      481 tcttttatga ccacgaacgg ttctggagtg aaacatacaa aatcatcttt tttatagata
      541 acagcagcag catttgagtg attatatata tcttctaagt ttaaatttgt ttttattttt
      601 gttttgaaac ataaatttaa aagataactg tttccgtttc tttgatggtt gataacttta
      661 tcaaaacttt ttttatactc atcaaaacta atcggatatt tttctaaaaa atagcttatt
      721 ggtgtttgat ttacagcgtt taatttaaat ttgattccta gtttaatggc attttgtggg
      781 gagcaaatta tactatcatc tggtttatca tagctgataa ttgctataaa aggcgtattt
      841 tgaaatgaat ttaaagcagc ttttatcata gttaaagccc caaaataggg ctttattatt
      901 tatctctgat gcctaactca gcgataagtt ttgtataaga ttcgtagttt ttagctttta
      961 agtattttaa aagtcttttt cttctgccga ctagcttaag aagacctaga cgagaactaa
     1021 aatctttttt attgattttt aagtgtcctg taagttctga aatccttgtt gtaagaagtg
     1081 ctacttgaac ttctggagaa cctgtatctc cgctttttct agcgaatttc gcaactattt
     1141 ctgctttttt agccgaatct aaagccattt ttgacctcct gagcggtatt tgaattttga
     1201 acgaaaatta tatctaagta aagcaaaaag aaagctgaaa ctaaatttaa cctactaaat
     1261 ttaaaagagt aagcgttata tcaatcaaaa tttaataaaa tttggtaaaa tattaaaatc
     1321 aaaaatttaa ggagtccatg tgctatttac taaagctagt gaatatgctt tgttatcttt
     1381 gatactttta tcacaaagta actctccaaa agacgtagat actatgtcga ctgaacttgg
     1441 aatttcaaaa agctttttag ctaaaatctt gcaaaatctt gcaaaagagg gaatactaaa
     1501 ttcctttaaa ggtgcaaacg gcggatttat tttagctaat aagccggcaa acataagtat
     1561 aaaaaagatt ttagaaagtg ccgaaaaaag aaaagcctct gtatttgagt gcagcaatgc
     1621 aagaagtgat tgccctagca ataaaggtga catttgtaaa atgtggccta tgttcaattc
     1681 attacaatta aaagtcgacg actttttaga caacattagc ttagcagata ttattaagaa
     1741 gtaaaattgg caaaacgtaa tatattgacg atggttgctc cgtttttagc accatttgta
     1801 aaggctaaaa gcctaaccgt cgtttttgtt attatagcta ttttagctat tatcatagtt
     1861 ccgctcccaa gcccggtact tgattttttc ttagcgctct cactatcaat ttctgtattg
     1921 ataatattaa tttctatata tataccaaag ccgacagatc ttagcacgtt tcctacttta
     1981 atacttataa taacactgtt tcgtctatct ttaaatatag ccacaacgcg tatgatttta
     2041 agcgaaggcc ataatggtcc agaagcggtt agtgagatta tcgctagttt cggacagttt
     2101 gtcgttggtg gaaattatgt tataggtatt atagtatttt gtatattggt tcttataaat
     2161 tttatggttg taacaaaggg ctcaacgaga gttagtgagg tacaagctag atttactctt
     2221 gatgctatgc ctggaaaaca gatggctatc gatgcggatt tgaatgccgg attgatagat
     2281 gaacaaacag cgcgctcacg tcgtcaagaa attatcggag aggcaaactt ttatggagca
     2341 atggacggtt cgtctaaatt tataaaaggt gacgcagttg ccggtattat cataacaatt
     2401 ataaatataa taggtggatt tttaataggt acttttcagc atgatcttga tatggcaaat
     2461 gctgctcaaa catatactat tttaactata ggcgatggtt tggtcagtca aattcccggt
     2521 ttgataactt caaccgctac tgctattatc ataactagag ctagtaaaga tgaggataat
     2581 tttgcagaag gcgttataag ccaacttttg ggtgaatata aaacactttt gatagtagga
     2641 tttatactgt ttgtgtttgc tttagtgcca ggacttccta ccttttcgct tgggtttatg
     2701 gcgattttat ttttgagtat aggttatatt atgaagcaaa cagaagaagg gaatcttgat
     2761 ttttctaata taaacaaaga tgaaaaaaaa cctcaaaaac aaggctcatc tacttctgct
     2821 gatacaggtg gagatattaa acctgctaaa aagagtgaag aagagatagc aaaagaagaa
     2881 cagataaaga tagatgatat attgaaaata gagattttag aactcgatct tggatatgga
     2941 cttttgaaac tagccgacgg ggatttaata gaaagaatac gtgctatgag aagaaatata
     3001 gccggacttc ttggattttt aatgccaaaa atcagaatac gagataatct ccaacttccg
     3061 ccaaatgagt atagatttaa gttaaaaggc gttgtaatcg gtcaaggcgt tatatacgcc
     3121 gataagtttt tggctatgga tagcggatat gtgagcagtg atatagatgg tatcgcaaca
     3181 aaagagccgg cgtttggact tgatgcttta tggatagatc aaggattaaa agaagatgcg
     3241 attcttagcg gatatacggt tgttgatcca gctagtgtta tatcgactca tatgagtgag
     3301 cttgtcaaac aaaacgcaag cgaacttctg accaaacaag aggttcaaaa tattttagat
     3361 aaagtaaaat cagaatatcc ggtcgtagta gaagatactt taaaagtagc tagcgtggga
     3421 cttatacaaa aggttttaaa aactctgctt aaagacaaca tacctataaa agatatgctt
     3481 agcatacttg aagcagtagg agatgtatca gaagtaagta aaaacttaga tatgataatc
     3541 gagcatgtaa gagccgctct ttgccgagtt ataacatcac tttacgcaga tgagaagggg
     3601 cagctgaact tctatatatt agacgctcct gcacaacaaa agcttataga tagtttaaat
     3661 tacaaagacg gcgcttatca tctaatgata aatgtggctc aaacttcagc catagtaaat
     3721 gctttgcgtc aaaaaagagc aaatcgaaat atcagcgaac aaggcgatat gctgctttgc
     3781 gttgagccta gtataagaaa atttatagca aatatagttc aaaattttgc tatagatata
     3841 gtaatactaa gctttgccga gatcgcgcca aatacgcagt ttgaaacgtt aggcgttata
     3901 gaaataccag aattataaag gaaaaatatg aaaatttacc accttagtca cacagattta
     3961 gatggatatt cagctcagtt agtgactagt ttttatctta aaaatataaa attttataac
     4021 tcaaattacg gaaaagagat agatgataaa tttgctcata ttttatctca aataggggat
     4081 gaaaaagcta ttatattgat aactgatcta aatttaacta tacagcaatg tgcatattac
     4141 gagaatttaa taagcgataa aaatataaaa cttatactac tagatcatca ccaaacaggg
     4201 cttgagtgtg cggataaatt tgggtggtat tacatggatt ctaaaagatg cgcaactaag
     4261 attacgtatg atttttttag ttctatgttt ggtgcggatg aaaggcttga gtcttactgt
     4321 aatgttgtaa atgcggtaga tatatggcta aaagatgatc caaatttcga gcttggcaag
     4381 gtttgtatgg gcattatagc cggagcaaga gagataaata aagtgctttt tgaggacaag
     4441 catatggaat atatgtttta tttgatgaac tcttttatgg aatttatagg gcaaaataat
     4501 gctcacataa agctagataa tgagatacat cagataaaaa aggcattttt taaatttaaa
     4561 aatgatgata cacttagtaa tctaaactca tcttatcttg taagactttt aagctttgaa
     4621 aaagataaat ttactataga ttatagaggt cacaaaggta ttttaactca taatataggt
     4681 agtacatcga ttatcggaaa tgactttttg gtggcgaatc cggattatga tttcttttta
     4741 gatgttacta gtaaaaaaac atttagtttt agagcaaatg gaaatttaga tgttagtttg
     4801 atggcaaaag agttggtgga tggaggaggg catgtaaatg ctagcggcgg attttttaca
     4861 ggatttaagg atagttataa ctatgagttg gtaaaatctc aaataataca gcttatagag
     4921 aaaaaaacag gagtcgtaaa atgaaagatt atgaaaacga aatcacgcaa gaagagatga
     4981 gttacgagct agatataatg atgcaaggaa tgttgtattt tgccggagta aaaaaagaca
     5041 aacttcttga tgcttgtgat atttatatcg aaaatatcga tgatgtatta gaaaattcag
     5101 aagcacaagg tgtaggcgaa gtcatagaag taattgaatt tatgaaaaaa aattataaag
     5161 aattatttaa ttaatggctt atatcgctta gcttttttat agagttttat tctaattttc
     5221 ttgactattt tgtgacagtc tttataaaat tgtttataaa actctattaa tttacaatca
     5281 ttgtctttag tacatattag agaaaagatg ctttctaagt cggtacgttc tttgtttgtt
     5341 aatttactca aagcggtttc ctaaagcctt ttttattttt ttaatagtat gaagagcctc
     5401 ttcatcatca agttcgcaaa gcattttgca tatagccata gcagcttgcg gatttgtagt
     5461 acctaatctc cagtcttggt atgttctcat agatactcct aatcgttcag ccatttgcga
     5521 ttgagatatt ttatttccaa gattttggct ctcaacagca ttatgtaata tattaaaaat
     5581 attgctaact tttatcatac gtaaaattat acaagaatta tcattaaata t
//
LOCUS       DAPPKW010000101         5534 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.101, whole genome shotgun sequence.
ACCESSION   DAPPKW010000101 DAPPKW010000000
VERSION     DAPPKW010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5534)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5534)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5534
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.101"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..1208)
                     /locus_tag="RPW04_001752"
     CDS             complement(<1..1208)
                     /locus_tag="RPW04_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3991 and TOPRIM domain-containing protein"
                     /protein_id="HDX6295833.1"
                     /translation="MIKENLLELPLDEILKSNGYYEKRNKSSRNYKTLTNEQDDTIII
                     SRQSNGHYLYFNPNDDNDRGNIYNFAKNRGIKANDLINNKNIDVSELKSNIEPISTIS
                     QSSKKAITNYKNLEQIKENSFLTTKRKISPEILKEFSSLKQDDKYGNAVVPSYILKNH
                     QDGKIQFLTQAGSISYLSKPLTQDTQGKPYDKPIKQLCNGSKGLEILKADNSQNSLKD
                     YKNIVICESMIDTLSYCEIKGLNLKDTLLCSTNGQITSSQKEVFKFLNEKAVNAKIIL
                     GFDNDKKGKEFDEIAKEIIPRATTDKAILKDFSDDLVIGKTLGLKANEISKESLTKPL
                     NDFSKKVEYLSKKYEFLEPQAKNNKVKELLGYNIAKFKEIESKIQCLAGMRECYKRLN
                     LVNKKIEKDYS"
     gene            complement(1205..1912)
                     /locus_tag="RPW04_001753"
     CDS             complement(1205..1912)
                     /locus_tag="RPW04_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbM"
                     /protein_id="HDX6295834.1"
                     /translation="MKKQVLAIITALMLSNSLNAGDILTGDTRLACEAILCLSSGTRP
                     SECSPSLNRYFSIKAKKWKDTVKARRNFLKLCPVDGADAKDPTFADLRDNILPNVDSR
                     KCTAEYINNNPETKCVKENCGEHRCRCVEYAYRPATKMPIGCDALINHKYTNIRPVNT
                     CGVTKWYSESEWNSGKSINKITESEYLKLKQSGAINLSVSNNNSRICRNNSNLSFCRT
                     YFKSEQINKNCWVNNEQ"
     gene            complement(1930..2355)
                     /gene="ssb"
                     /locus_tag="RPW04_001754"
     CDS             complement(1930..2355)
                     /gene="ssb"
                     /locus_tag="RPW04_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDX6295835.1"
                     /translation="MNKVDLCGYLGRDFELIYAKNGNAIASNSLAITKKWTDSNGNKA
                     EHTNWIPIKLFGRIAEVAYQYFKQGSQFLCSGELTTDEYVDNNGNTRYVWEVRVKEFY
                     WLNKKGNEKDISNSYSIADETTPTLNLESTENITHEDES"
     gene            complement(2357..3349)
                     /locus_tag="RPW04_001755"
     CDS             complement(2357..3349)
                     /locus_tag="RPW04_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295836.1"
                     /translation="MKKSLISVVVASSLFISSVTASGIPTIDVAAIAQAVTGYMQSLK
                     DYSEQIKQYEQMVKDTLNFEKQMKELGVDMTDVNQILGDATQMINSMKDIYNSVRNIP
                     EDIMGDVARVKMACSFLETNSQFFGHSIKTSSNSIKSRINQCTYALRNGANLSKEIEK
                     IIDKMNASIDPIKRANYKTQIVNLKKAGKFLQARDNIEKTNALLAFEDTFRNGDKTNS
                     YSKAKMDDDLTQFAKQLSKANNQKQAQALTNSLLLKILENLQHQYELNINYTSTMASS
                     GYVNKNNQNKDLTEDSFNQSVVEYKRNDDIFEPETKQLPKDELGLPKFIFERRN"
     gene            complement(3346..3939)
                     /locus_tag="RPW04_001756"
     CDS             complement(3346..3939)
                     /locus_tag="RPW04_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295837.1"
                     /translation="MMSASPSGKRFVINQDLEKANEALSKNYNDFTAQRQAYIDLNFS
                     LAYAYEYDTKKAKEYQDNAEKMANLKDKQDERATYETNEDNNQKIMIPHKDDEKFMKQ
                     FQEENQKLYRQLELELEMMTNEARLYQKIKDNKNQGIDKLTPLYVELQEGQIDIKRNP
                     INADRFRHSYPNATKTLEEKVEKWVEKENKKEQGMQR"
     gene            complement(3936..4844)
                     /locus_tag="RPW04_001757"
                     /pseudo
     CDS             complement(3936..4844)
                     /locus_tag="RPW04_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952052.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1353 a          960 c          687 g         2534 t
ORIGIN      
        1 gaataatctt tttctatttt tttattgaca agattaagtc tcttataaca ttctctcatt
       61 cctgctaaac attgtatttt tgattctatt tctttaaatt tagctatgtt gtatcctaac
      121 aactctttta ctttattatt ttttgcttgt ggctctaaaa actcgtactt ttttgataag
      181 tactcaacct ttttactaaa atcatttaat ggctttgtaa ggctttcttt gctgatttca
      241 ttggctttta gccctaatgt tttgcctatc actaaatcat cgctaaaatc ctttaaaatc
      301 gccttatctg ttgttgctct tgggattatt tcctttgcta tttcatcaaa ttctttccct
      361 tttttatcat tatcaaagcc tagtataatt tttgcattga ctgctttttc atttaaaaat
      421 ttaaatactt ctttttgact gctcgttatt tgaccatttg ttgaacacaa caaagtatct
      481 tttaaattta agccttttat ttcgcagtat gatagggtat ctatcatact ttcgcaaatt
      541 actatatttt tataatcttt taaactattt tgtgaattat cggcttttaa aatttctaac
      601 cctttgcttc cattacaaag ttgcttaatt ggtttatcat agggttttcc ttgtgtatct
      661 tgtgttaaag gctttgatag atagcttatg cttcctgctt gtgttaaaaa ctgaattttg
      721 ccatcttgat gatttttaag tatgtagctt ggaactaccg cattgccata cttatcgtct
      781 tgttttagac tgctaaattc ttttaaaatt tcaggactta tttttctttt tgtggttaaa
      841 aatgagtttt ctttaatttg ttctaaattt ttataatttg ttattgcttt tttactgctt
      901 tgcgatattg ttgatattgg ttctatgttg ctttttagct cacttacatc tatgttttta
      961 ttgttaatta gatcgtttgc ttttatgcca cgatttttag caaaattata tatatttccc
     1021 ctatcgttgt catcatttgg attgaagtat agatagtgtc catttgattg tcttgatatg
     1081 attatcgtgt catcttgctc atttgtaagc gttttgtaat tacggctact tttgtttctt
     1141 ttctcatagt agccgttact ttttaaaatt tcatcaagtg gaagctctaa taaattttct
     1201 ttaatcattg ctcattatta acccaacaat tcttatttat ttgctcactt ttaaaatatg
     1261 ttctgcaaaa acttaaattt gaattatttc tacatattct tgagttattg tttgaaaccg
     1321 ataaatttat ggcaccagat tgctttaatt ttaaatattc gctttctgta atcttattta
     1381 ttgattttcc gctattccat tcactttcac tataccattt tgtaactcca caagtattaa
     1441 ctggtcttat attggtgtat ttgtgattaa ttaaagcatc acaacctatt ggcatttttg
     1501 ttgctggtct atatgcgtat tctacacaac gacatctatg ttcaccgcaa ttttctttta
     1561 cacattttgt ctctggattg ttatttatat attctgctgt gcattttcta ctatctacat
     1621 ttggtagtat attatctctt aaatctgcaa aagttggatc ttttgcatct gctccatcaa
     1681 ctggacataa ctttaaaaaa tttcttcttg cctttaccgt atctttccat ttttttgctt
     1741 taattgagaa gtatctgttt aaagatgggg aacattcact tggtcttgtt ccactgctta
     1801 gacacaaaat tgcttcacat gctagtcttg tgtcaccagt taagatatct ccagcgttta
     1861 ggctgttact taacattaaa gccgtgatga tagctaaaac ttgttttttc atttttactc
     1921 ctttttaaat tacgattcgt cttcatgtgt tatattttca gttgattcta aatttaaagt
     1981 aggtgttgtt tcatctgcaa tgctatatga gttgctaata tctttttcat tccctttttt
     2041 atttaaccaa taaaattctt taactctaac ttcccaaaca tatcttgtgt ttccattatt
     2101 atcgacatat tcatctgttg ttaattctcc tgagcataaa aactgagacc cttgcttaaa
     2161 gtattgatat gctacttctg ctattctacc aaataacttt attggtatcc aatttgtatg
     2221 ttcggctttg tttccattgc tgtctgtcca tttcttagtt attgctagtg aattactggc
     2281 tatggcattt ccattttttg cgtatatcaa ttcaaaatct cgccctaaat atccgcataa
     2341 atctactttg ttcattttaa tttctccttt caaatataaa ttttggaagt cctaactcat
     2401 cttttggtaa ttgctttgtt tctggttcaa agatatcatc attgcgttta tattcaacca
     2461 cactttgatt aaaactatct tctgttaaat ctttattttg attattttta tttacatatc
     2521 cacttgatgc cattgtgctt gtataattaa tattcagttc atattggtgt tgcaaatttt
     2581 ctaaaatttt aagtagtaat gaatttgtaa gtgcttgtgc ttgtttttga ttgtttgcct
     2641 tacttaattg ttttgcaaat tgtgttaaat cgtcatccat ttttgctttt gaataagaat
     2701 ttgttttatc tccgttacga aatgtatctt caaaagccaa taatgcattt gttttttcta
     2761 tattatctct tgcttgtaaa aactttccag cctttttaag atttacaatt tgagttttat
     2821 agttggctct ttttattgga tctatggaag cattcatttt atcgattatt ttttctattt
     2881 ctttacttaa atttgcacca tttcgtaaag cataagtaca ttgatttatt ctacttttaa
     2941 ttgaattgct tgatgtttta attgaatgac cgaaaaattg actatttgtc tccaagaaag
     3001 aacaagccat tttaaccctt gccacatcac ccataatatc ttcaggtatg tttcgaacac
     3061 tattataaat atctttcatt gaatttatca tttgtgtggc atctcccaat atttgattga
     3121 catctgtcat atcaacacca agctctttca tctgtttctc aaaatttaga gtgtctttta
     3181 ccatttgttc atattgctta atttgttctg agtagtcttt taggctttgc atataacctg
     3241 taactgcttg ggcaattgca gcaacatcta tcgttggaat accactggcc gttacactgc
     3301 ttataaacaa tgacgaggct acgactaccg atataagtga ttttttcatc tttgcattcc
     3361 ttgttctttt ttgttctctt tttctaccca tttttcgact ttttcttcta gagttttggt
     3421 ggcatttgga taactatgtc taaatctatc agcatttatc ggatttcttt ttatgtcgat
     3481 ttgaccttct tgcaactcta cataaagtgg cgttagctta tctatgcctt gatttttgtt
     3541 atccttgatt ttttgataaa gccttgcttc atttgtcatc atttcaagtt ctagctctaa
     3601 ttgtctgtaa agcttttgat tctcttcttg aaattgtttc ataaattttt catcatcttt
     3661 gtgtgggatc attatttttt ggttattgtc ttcgttcgtc tcgtatgttg ctctttcgtc
     3721 ttgtttgtct tttaaatttg ccatcttttc cgcattgtct tgatactctt ttgccttttt
     3781 ggtatcgtat tcgtatgcgt atgctaggct aaaatttaag tctatatatg cttgtctttg
     3841 tgccgtaaaa tcattatagt tcttacttaa agcttcgttt gctttttcca aatcctgatt
     3901 aataacaaat ctttttccac tcggtgatgc actcattata aactcctacc tttatcgttc
     3961 tctttggtct tatttaaaat tttatctttt gcttgctcta gtgagtcatt tactttttta
     4021 taaaattttg ggtagctatt tttaaaattt ggcgtttctt tttcaatatc tcccattagt
     4081 tttttcaatt tttcatagcc ttttatatct agtccttttt tcttttcttt atcgtatatg
     4141 ctttgaagtt tggcgtagtt gccatgttct ttttccatct ctttcaagcc attttttact
     4201 tctttttgct ctttatataa atcttttact aaatcaccta cagcttctct aaattttgga
     4261 ctatcaaatg caagttctag tttttcttgg cgttggcgat tttttgcttc gctctcatcc
     4321 tttccttgtt tcatcatcat ctctaagctt ctatccattt cttgaagtgc agttaagatg
     4381 ccatttattc catcgctgtt cattaaattg tcaattgatt tttgaaaatt ggcttcaagt
     4441 cgtgactgct tatcttttaa gtcttctagt tctttttggt gttgtagctc taattcatca
     4501 gcttttttta tccaatcttc ttgttcagct atgttttctt gattgtcttt tatttcttta
     4561 ttatctgtat tttgttcttt ttcccttttt tcttgctctt tttctatttg ggcttctttt
     4621 tccttgattt gctcatctat tttttctttt tcttttagaa tttccaagct ctcttttaac
     4681 tcttcatttt tatctaagcc gtcaagtttt tcccttgcaa actctcgctt ttgttttgga
     4741 cctatgaatt cttgtttttc attttctaat gtttgaattt ctttatctat gctctctttt
     4801 tcttctagtg tattgatagc ttctttgata tttggattta aatttttgtt tgttttattg
     4861 aaattttttt ctatctcttt ttgtttttct cgttgctctt tttcttcatc aggtattgtt
     4921 tgaacatctt tttctttgaa atattgattt tgttttaatg acttttgcaa gttatctatt
     4981 ttttcaatcc attctaatct gtagttatat cgttgttcta aaccatcaaa aaaaccgctt
     5041 tctttacctt cttctagcca aaatctttgc attcctacat caaatagatt taaatctctt
     5101 tcaacattat ttttggataa ttgccaataa aaacctttag ttaattcagt tgcattttct
     5161 ccaacgccaa tccatagaaa tttttcatct tcaattaaat ttaatcctac ctcttttact
     5221 acttttttaa actctgctaa ttgctcttta ttttcatatt cattggctgg tttaatgtgt
     5281 tgtgtcacat tcatttcttg ttccgataga taactccatt cattaagttc ttcttgtgtt
     5341 agctcatcat tcatctttat tactccaaat ttaatttaaa attcatagtg ttaatttaaa
     5401 caaatacttc aagtattcta cttttaatta aatttaaaaa agctgtaaaa agtgatatac
     5461 aaaaaatcaa aaaaacggct aaaatttaaa aacgctcaca aatgcctttt aaatgctcta
     5521 caatcaaaat taaa
//
LOCUS       DAPPKW010000102         5427 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.102, whole genome shotgun sequence.
ACCESSION   DAPPKW010000102 DAPPKW010000000
VERSION     DAPPKW010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5427)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5427)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5427
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.102"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            150..3180
                     /locus_tag="RPW04_001758"
     rRNA            150..3180
                     /locus_tag="RPW04_001758"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            3484..3602
                     /gene="rrf"
                     /locus_tag="RPW04_001759"
     rRNA            3484..3602
                     /gene="rrf"
                     /locus_tag="RPW04_001759"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(3872..5029)
                     /locus_tag="RPW04_001760"
     CDS             complement(3872..5029)
                     /locus_tag="RPW04_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002953805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDX6295838.1"
                     /translation="MKNLPKNRNIYIQKGRFYVDYQKDGIRIRRSTGLKKSSFAFDFI
                     RKNYDRFIGSKFELESAQREYYKLEDAKVDCGLRKSDEASKTIKNTSEFSFDNVIDSL
                     LNEKSFLKNKTINLYNVMSSAVKDFLNHKSLYYLSDFQRHHSIEFIQYFKDKGLKDSS
                     ISAYCSFLKMLFRYAINNDLISKNPFYMPRFKQQYDTTENEKFTPFSLEEILNLIKNA
                     DDEELRLFLIVAFFTGARTGEIFALTYADLDFKNRQIRINKTLSDLGVVDSPKTKSSN
                     RVIDMLDIVYKELIKLNNTHKDEQIFKLSRSMIRVKFNNLQEKLGYNKRRLYDTRHSF
                     ASVMLSRGEEPMWVGCKMMGHKDLNETYRSYAKYLPKEVKQRAVFLNDIVI"
BASE COUNT         1780 a          932 c         1113 g         1602 t
ORIGIN      
        1 tctcaattcc gaaataccaa atttattatt taagtttgtc tttaaggcaa atgaacacaa
       61 tattttattg tgttgtattt taggcggttg ggggagtgct tgcacttccc atcggaacaa
      121 gagctttgct cttgcgagaa gactaaaaaa ggtaagctac taagagcaaa tggtggatgc
      181 cttggctagt agaggcgatg aaagacgtgc caggctgcga taagtctcgg ggagccgtca
      241 aggggctttg atccgggaat ttctgaatgg ggcaacccag tatatagtga tatatactac
      301 cgcaatgcgg agctaacgtt gggaattgaa acatcttagt accaacagga aaagaaatca
      361 aaagagatta cgctagtagc ggcgagcgaa cgcgtaagag ggcaaaccgt tagtttacta
      421 acggggttgt aggactgcaa catagactta aacaaactaa tagaataacc tggaaaggtt
      481 gaccatagag ggtgatagtc ccgtatatga aagtgcgttt atacttagca gtatcctgag
      541 tagggcggga cacgtgaaat cctgtctgaa gctggggaga ccactctcca accctaaata
      601 ctactactag accgatagtg cacaagtacc gtgagggaaa ggtgaaaaga actgaggtga
      661 tcagagtgaa atagaacctg aaaccatttg cttacaatca ttcagagcac gattctttat
      721 gacgtgtgat ggactgcctt ttgcataatg agcctgcgag ttgtggtgtc tggcgaggtt
      781 aaggaaaccc ggagccgtag cgaaagcgag tcttaatagg gcgtatagtc agatgctgca
      841 gacccgaaac gatgtgatct atccatgagc aggttgaaac tggtgtaaga gccagcggag
      901 gaccgaacag acggccgttg aaaaggctcc tgatgacttg tggatagggg tgaaaggcca
      961 atcaaacatc gtgatagctg gttctctccg aaatatattt aggtatagcg ttgtgtcgta
     1021 attataaggg gtagagcact gaatgggcta gggcatatac caatgtacca aaccctatca
     1081 aactccgaat acttataatg taatcacagc agtcaggcgg cgagtgataa aatccgtcgt
     1141 caagagggga acaacccaga ctaacagcta aggtccctaa atctcattta agtggaaaac
     1201 gatgtggagt tactgaaaca accaggaggt tggcttagaa gcagccatcc tttaaagaaa
     1261 gcgtaatagc tcactggtct agtgattctg cgcggaaaat ataacggggc taaaatgagt
     1321 accgaagctt tagacttgca cttaattcta attataaatt tggctatgag cttttaagtt
     1381 atatttctca taatttaatt gcactcatat aaattaaatt atgagaaaat agtttagcta
     1441 aaataattag aagtaattag aattaagtgc aagtggtagg agagcgttct attcagcgtt
     1501 gaaggtatac cggtaaggag tgctggagcg gatagaagtg agcatgcagg catgagtagc
     1561 gataattgat gtgagaatca tcaacgccga aaacccaagg tttcctacgc gatgctcgtc
     1621 atcgtagggt tagtcgggtc ctaagcaaag tccgaaaggg gtatgcgatg gaaaattggt
     1681 taatattcca ataccaatta ttatgtgcga tggaaggacg cttaaagtta gtggagctag
     1741 cggatggaag tgctagtcta agggtgtagg ttgagttata ggcaaatccg taactcttta
     1801 tccgagacct aaaaggctca tgacgctctt cggagtagat tgagaatcca tgatactatc
     1861 gagccaagaa aagtttctaa gtttagtaat aattgcccgt accgtaaacc gacacaggtg
     1921 ggtgggatga gtattctaag gcgcgtggaa gaactctctt taaggaactc tgcaaaatag
     1981 caccgtatct tcggtataag gtgtgcctaa ctttgtatta agattcactc ccaaagcaaa
     2041 gaaggttaca acaaagagtc cctcccgact gtttaccata aacacagcac tctgctaaca
     2101 cgtaagtgga tgtatagggt gtgacgcctg cccggtgctc gaaggttaat tgatgatgtt
     2161 agctatgcga agcatttgat cgaagcccga gtaaacggcg gccgtaacta taacggtcct
     2221 aaggtagcga aattccttgt cggttaaata ccgacctgca tgaatggcgt aacgagatgg
     2281 gagctgtctc aaagagggat ccagtgaaat tgtagtggag gtgaaaattc ctcctacccg
     2341 cggcaagacg gaaagacccc gtggaccttt actacagctt gacactgcta tttggataaa
     2401 gatgcgcagg ataggtggga ggctttgatc catagaccct ggtttatggt gagccattgt
     2461 tgagatacca ctcttcttta ttcgagtagc taactagcct aagttatcct taggtaggac
     2521 aatgtctggt gggtagtttg actggggcgg tcgcctccca aaatgtaacg gaggcttaca
     2581 aaggttggct cagaacggtt ggaaatcgtt cgtagagtat aaaggcataa gccagcttaa
     2641 ctgcaagaca tacacgtcaa gcagagacga aagtcggtct tagtgatccg gtggttctgt
     2701 gtggaagggc catcgctcaa aggataaaag gtaccccggg gataacaggc tgatctcccc
     2761 caagagctca catcgacggg gaggtttggc acctcgatgt cggctcatcg catcctgggg
     2821 ctggagcagg tcccaagggt atggctgttc gccatttaaa gcggtacgcg agctgggttc
     2881 agaacgtcgt gagacagttc ggtccctatc tgccgtgggc gtaagaagat tgaggagagt
     2941 tgaccctagt acgagaggac cgggtcgaac tagccactgg tgtaccagtt gttctgccaa
     3001 gagcatcgct gggtagctaa gctaggatga gataagagct gaaagcatct aagctcgaag
     3061 ccaactccaa gatgaatctt cttttaagag ctctagtaga ctactagttt gataggctgg
     3121 gtgtgtaatg gatgaaagtc ctttagctga ccagtactaa tagctcgttt gcttatcttt
     3181 atataagcat cacttccttg ttaaggataa atttgctttg tcttttttct actatgcgac
     3241 gttagattac gtttcaaact tcggtcacga actttatgtt cgctcctttg tttttactta
     3301 tctgccttgc ctagcgaaaa aaacagttag caaaaagttc aattaatctt agaacttaaa
     3361 acgatccttg caaagaaaat agttttactc tagttaaaac cgaaaagact tttaacgatt
     3421 atttaacaaa cagtgttaaa taagagaata gctaaactat tttttattct tttatttaac
     3481 actgcccgtg gctatacgtg aataggaaac gccttgctcc atctcgaacc aagaagctaa
     3541 gcttttcatg gccgatgata ctctctctta ctgggatgtg gaaaagtagg tcgctgcggg
     3601 ctttgtgttt atgcttaatt cttattattt aaatcaatca actacttatt attaatcaaa
     3661 ctatctattc tcattaaaag ttttatcaat taaaagctta tttctaatgt tttatgattg
     3721 acaaatgaca gatattagtt taatcaatat aagctaaaat acctaaaata agagatttaa
     3781 acacattaaa gaatgcaaaa atcattctat tttttattaa atttatacat attataacat
     3841 atttttttaa aaatatgcct aaaataaaat tttaaatgac aatatcattt aaaaaaacag
     3901 ccctttgctt aacttctttt ggtaaatatt ttgcatatga tcgataagtt tcatttaaat
     3961 ccttatgtcc catcattttg caaccaaccc acataggctc ttcaccacga cttagcatta
     4021 cagaagcaaa agagtggcga gtgtcgtaaa gcctacgctt attatagcca agtttttctt
     4081 gcaaattgtt gaatttaact ctaatcatag agcgagacag cttaaaaatt tgttcatctt
     4141 tatgggtatt attaagcttt ataagctctt tatatactat atcaagcata tcaataaccc
     4201 tattgcttga tttggttttg ggtgaatcaa caacacctaa atcagaaaga gttttattga
     4261 tgcgaatttg cctattttta aaatctagat ccgcataagt aagagcaaaa atctccccag
     4321 ttctagcacc agtaaaaaaa gcaacgatta aaaataagcg aagctcttca tcgtctgcat
     4381 ttttgataag atttaaaatc tcttctagac taaaaggtgt aaatttttca ttttcagtag
     4441 tatcgtattg ttgcttaaat cgtggcatgt aaaacggatt ttttgaaatc aaatcattat
     4501 taatggcgta gcgaaataac atttttaaaa atgaacaata agcactaata gagctatctt
     4561 tcaagccctt atctttaaaa tattgaataa attctatgct atgatgcctt tgaaaatctg
     4621 ataaataata aagactttta tgatttaaaa agtctttaac agcactactc atgacattat
     4681 aaagattaat tgttttattc tttaaaaatg atttttcatt caataaacta tcaattacat
     4741 tatcaaaact aaattcactg gtatttttta tagtcttaga tgcttcatca cttttcctta
     4801 gcccacaatc cactttggca tcttctaatt tataatattc acgctgagca ctttctaatt
     4861 caaatttaga accaataaat ctatcatagt tcttacgaat aaaatcaaat gcaaaagatg
     4921 attttttaag accagtagag cggcgaatcc ttatgccatc cttttggtaa tcaacataaa
     4981 atctgccttt ttgaatataa atatttctat ttttaggtaa atttttcata gatatatttt
     5041 aacaaaaaaa tcttaataag caaatataga aacattagtt attaaatgta taaatattct
     5101 attattattt taaattaatt atatatttta agttataaaa ataatgaaaa taattttttt
     5161 gagcttaaag taaatattta agggcttata aaattaaaaa tagcttaaaa ataatataaa
     5221 tttgaattaa gttttacaaa atgttccgat aaaatacatt tttaatttaa gtttcaagag
     5281 atgtaaaatt gaattaaaag cataactaag gcaataaaaa gctataagta aaaattacaa
     5341 taaaagttta agtttttaca aaatgttcct atgctaccta ttatataaaa tacataaata
     5401 aaaagggaaa aaataaaatt tagaatt
//
LOCUS       DAPPKW010000103         5381 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.103, whole genome shotgun sequence.
ACCESSION   DAPPKW010000103 DAPPKW010000000
VERSION     DAPPKW010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5381)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5381)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5381
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.103"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            49..375
                     /locus_tag="RPW04_001761"
     CDS             49..375
                     /locus_tag="RPW04_001761"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HDX6295839.1"
                     /translation="MLVSADLRQRNIIISKSKNTALSSNNTDVININNPSQNGISHNQ
                     FDAFDIHKGVIFNNSLEDGISKIGGAIEKNPNLTKNASVIVSEITSKQASQINGILEV
                     FGKKLI"
     gene            1761..5213
                     /locus_tag="RPW04_001762"
     CDS             1761..5213
                     /locus_tag="RPW04_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002787611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HDX6295840.1"
                     /translation="MEARVNNILKYINSLDSRQGIIQSSKNININTISRDRNRRIYNE
                     GKILAKNNISTFGKINNVTLSKDITMREVFSKIKVGGFFAREYLGSWNTNSTHYFTRG
                     ESLLDALRYFSSNAAKNHQRESAWNALKDAARKNKTLRQYFSLLLGSNYASQRFVPNQ
                     NSWNLNAKMIFKAKSQAQIASNGRLNIVSSSITQGLSSSLNRDFALIESNVKKAVNSR
                     DLILSSIPDIVNSRLFTINIHKDDVVSNDRGGLVGKAAVSIDTGSLSSSLSGISSEGQ
                     VNINASDEANFISSQLDGSEVNINANRANINTALATNEEGTSTSVSKTEIKGQNSVTI
                     NTNDDLNIQNSDITASAQNSQINLNSQDGDVNIKNDYSTSSSFTQEQTGDNVSTSSTQ
                     SNTVLSSNISADNLSISAKKDANIVSSNISSTSQQGSIDINAQNVNIADAQENTKIQN
                     EEYSRSSTEINHKSTSLTTSTSQGSSLTSQNNININASNDVKITGSNIQAQNSANLNA
                     KNISVNSGATKISSSSQASNTQIAGFRQTTQNVESSVVASSSISANNEVNLNAKDKVD
                     IKGSNLKGEETNVNGNEVNFIAAQNQTHTQTNSLGVGIFANANLELGGQGISANYSHA
                     GQIANTKKLDSESSITQGGLRSDLFGAGEVGVELISTQKTTNEVTNVSSRLEGSNINV
                     NSNNTLDIGGANLKANKDINLKGGEIKSTKYADTKTHSSTGFSLSVKEKLESLSPIAS
                     FANQVSQNLHSEQKGLKPNPGIIAAQISASTVNMLSNNLVTGNSNQTIGFKFNQSQSS
                     SSNENITQITAGENLNISSTKGNITLNGTNANANNISINSKKDLIVNAAKSKASSSNI
                     QFEATITNRQTAGYHIIDGGVAGNAVEFFTNGSYSRTDESKFSNTTLNANNDVSIKTK
                     NNTVLNGANVNANNVNLDIGKNLEINSLVDTSNSEKYGGTLSGTITGALSSNHIATGS
                     VSGMVGFGYNKSNKAEVSTQSGFNAKNEINGGVGESLSLKAGILNSKVGSGNLEVARK
                     VLESDVKTYEKSDGATVRINGGTNTSFGAVVDIEDHINKTGSANSASNININGNKNNI
                     ISTDTQNTQSSTDSSWAGGTVNFSTSVTKVKDAVNHIRGMNSNPTSSTNTMHVNEITE
                     TTRF"
     gene            5214..>5381
                     /locus_tag="RPW04_001763"
     CDS             5214..>5381
                     /locus_tag="RPW04_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDX6295841.1"
                     /translation="MKIMKIIFLLLSFLCFLKAENSASIFDLLDKKEQQFYIEKEFDN
                     LEKNQKQERILP"
BASE COUNT         2102 a          738 c          946 g         1595 t
ORIGIN      
        1 tttcgtttat cgttaagttt aacacttatt aacgtgttat ttccttgttt gctagtttca
       61 gcggatttaa gacaaagaaa tattattatt tcaaaatcta aaaatacggc attatctagc
      121 aataataccg atgtgattaa tattaataat ccgagtcaaa atggaatttc gcataatcaa
      181 tttgatgcct ttgacattca caaaggcgtt attttcaata atagtctaga agacggaatt
      241 tcaaaaattg gcggtgcgat tgaaaaaaat cctaatttaa caaaaaatgc tagtgttata
      301 gtgagcgaga ttacaagtaa acaagcttca caaattaatg gaattttaga agtttttgga
      361 aaaaagctaa tttagtattt gcaaatgaaa acggttttag cgttaatgga gcagcttttt
      421 taaataccga aggtgtaacg cttagcacag gtaagtttaa tgataatttt cttaatatcg
      481 atagtgatgc gagaattaaa ataggtaaca gtggcattat cgttgatgga gattacttta
      541 atgtaattag ccgcggtata gatatcgccg gcagtattgc tcattatgaa aaaggtaaaa
      601 atttatctaa tattaatttt attgccggac ttaatacagt agatttaaat aatccaaatt
      661 cacctaaaat aagtgctaaa ttaaccacac aaaaagataa aaaaattgat tatggaatcg
      721 atggaaagta tcttggttct atgtatgcaa ataaagttac tttaattagc accgaagaag
      781 gagtcggtgt aaggcatagc ggggttgtga ggagtattaa ggatgttatg gttaaagcta
      841 aagataaggt tgagtttcaa gctttaggcg taaatagaaa cggaagtatc agcatagaag
      901 caaaagaaat tcaaagctct ttaatcaatg cagacaacat aagtttaaaa gcagaaggaa
      961 aaattaccaa taaaggactt tacagaggta atgagataac cgttaattct aattcttttg
     1021 aaaatgctaa aacagtagac ataagtaaag aaacaaaaga tatttttaaa acaaatcaaa
     1081 aaaaatctca aatttatgcc ggtactatct cggtaaacgc tacagataaa attgacaatt
     1141 tcggttctat caatgtttta aatgatatag tattaaatac aaattcctta aacaataaag
     1201 gagaaatatc agccaataat aatattgatt tagtacttag cgcttttgat aacggcggca
     1261 aaatcataag tcaaaataat atcacgttag aagcaaatga tgatttggat cttaatgctc
     1321 gaacattaca tgcaaaaaat ttacttgata tttcaagtaa cgaaaatttg cgtgtaaatt
     1381 caaagcttga aaatttaggt tcgattcaac taaatgcacg aaatatttat attaatgctt
     1441 tggttgcaag cgggaaagat ttggttttac attcgcgtgg aagtattgaa aataatggtt
     1501 atttgtattc tgttaaaaat actactttga atgcattgat cgttatgaat gattcaatga
     1561 ttgatagttt gcaagattta agtattaact caaaatatgt gaataataac tctttgatat
     1621 atgcaagtag agatatcaat atagaagcgc aaactttaaa taacatagcg caaatgatag
     1681 gttcgcttac atattttact gataatacaa gaggatttgg ctgggcaaat tacggcgata
     1741 ctgcatttaa acgatggaat atggaagcta gagttaataa tatattaaaa tatatcaatt
     1801 cattagatag tagacaaggt ataattcagt caagtaaaaa tattaatata aatactattt
     1861 cgcgagatag aaataggcga atttataatg aagggaagat actagctaaa aataatatat
     1921 caactttcgg aaaaattaac aatgtaactt taagtaaaga tataaccatg agagaagttt
     1981 tttctaaaat aaaagttggt ggattttttg ctagagagta tcttggtagt tggaatacaa
     2041 attcaaccca ttatttcact agaggagaaa gcttacttga tgctttaaga tatttttcaa
     2101 gcaatgcggc aaaaaaccat caaagagaat ctgcttggaa cgctcttaaa gatgcggcaa
     2161 gaaaaaataa gacgcttaga cagtattttt ctttattatt aggcagtaat tacgcttctc
     2221 aaagatttgt tccaaatcag aatagttgga atcttaatgc aaaaatgatt tttaaagcaa
     2281 aatcacaagc tcaaatagca tctaatggta gattaaacat agtttctagc agcataacgc
     2341 aaggattatc aagttcttta aatagagatt ttgctttgat agaatctaac gtaaaaaaag
     2401 cggttaatag tagagattta attttaagtt ctatcccaga tatcgttaat tcgcgcttat
     2461 ttactattaa tattcacaaa gatgacgttg tttcaaacga taggggcggt cttgtcggca
     2521 aagccgcagt aagtatcgat acaggctcat taagttcatc tttaagtggt atttcttcag
     2581 aaggacaagt taatataaat gctagcgatg aggctaattt tattagttct cagctagatg
     2641 gaagcgaagt aaatataaac gcaaatagag cgaatataaa taccgcttta gctactaatg
     2701 aagaaggaac tagtacttct gtatctaaaa ctgagattaa aggacaaaat tccgtaacta
     2761 ttaacacaaa cgatgattta aatatccaaa atagcgatat aactgctagc gctcaaaatt
     2821 cgcagataaa tttaaactct caagacggtg atgtgaatat taaaaatgat tattcaactt
     2881 catcttcatt tactcaagaa cagacaggcg ataatgtttc tacaagttct acacaaagca
     2941 atactgtttt aagctcaaat ataagtgcgg ataatttaag cattagcgca aaaaaagatg
     3001 ctaatatagt atctagtaat ataagctcta cttcgcagca agggtctatt gatataaatg
     3061 cacaaaatgt taatatcgca gatgctcaag aaaatacgaa aatacaaaac gaggaatata
     3121 gtagaagctc aacggaaata aaccataaaa gtactagttt gactacttca acttcgcaag
     3181 gtagttcttt aacctcacaa aataatatta atatcaatgc aagtaatgat gtgaaaataa
     3241 caggttctaa tattcaagca caaaattctg ctaatttaaa tgctaaaaat attagcgtaa
     3301 atagtggagc gactaaaatt tcaagttcgt ctcaagcttc aaatactcaa attgccggct
     3361 ttagacaaac tacccaaaat gtagaaagtt ctgtggttgc ttcatcaagt attagtgcaa
     3421 ataacgaggt taatttaaat gctaaagaca aagtagatat caaaggtagc aatctcaaag
     3481 gtgaagaaac aaatgttaac ggtaatgaag taaattttat tgccgcacaa aatcaaacac
     3541 acacgcaaac taattctctt ggcgtaggaa tttttgctaa tgcgaattta gaattaggcg
     3601 gtcaaggtat aagcgcaaat tatagtcatg ctgggcaaat tgctaatact aaaaaattag
     3661 atagtgaaag tagcattact caaggcggat tgagatctga tctttttgga gctggagaag
     3721 tcggagttga attgatatca acacaaaaaa ctaccaacga agttactaac gtttcaagta
     3781 gattagaagg ttcaaatatt aatgtaaatt caaataatac tttagatata ggtggagcaa
     3841 atttgaaggc aaataaagat attaatctta aaggcggaga aatcaaaagc accaaatacg
     3901 cagatacaaa aacacacagt agcaccggtt ttagtcttag tgttaaagaa aaattggaat
     3961 ctttgagtcc tatcgcttct tttgctaatc aagtatcgca aaatttacac tctgagcaaa
     4021 aaggcttaaa accaaatcca ggtatcattg cggcacaaat ttcagcaagt acggttaata
     4081 tgttgagtaa taatcttgtt actggaaatt ccaaccaaac cataggtttt aaattcaatc
     4141 aaagtcaaag ttctagttca aatgaaaata tcacgcagat tactgcggga gaaaatttaa
     4201 atatttcgag cactaaagga aatattactt taaatggaac taatgcaaat gcaaataata
     4261 ttagtataaa ttcaaaaaag gatttgattg taaatgctgc aaagtctaaa gctagttctt
     4321 caaatataca atttgaggca acaattacca atagacaaac cgcaggttac catattatcg
     4381 atggcggagt tgcgggtaac gcggtagaat tttttactaa cggttcgtat tctagaaccg
     4441 acgaatctaa atttagcaat accactctta atgcaaataa tgatgtaagc attaaaacta
     4501 aaaataacac agttcttaac ggagctaatg taaatgccaa taacgtaaat ttagatatag
     4561 gtaaaaattt agaaatcaat tctctagtcg atacttcaaa ttctgaaaaa tacggcggaa
     4621 ctttaagcgg aacgataact ggagcattat caagcaatca tattgctaca ggaagcgttt
     4681 ctggtatggt aggttttgga tataataaat caaataaggc tgaagtttca actcaaagcg
     4741 gatttaatgc taaaaatgaa attaacggcg gtgtaggcga aagtttgagc ttaaaagccg
     4801 gaattttaaa ttcaaaagta ggttccggaa atttagaagt tgcaagaaaa gttttagaat
     4861 ctgatgtaaa aacttatgaa aaaagcgatg gtgccactgt aagaataaat ggcggaacaa
     4921 atacaagttt tggcgcagta gttgatatcg aagatcatat caacaaaaca ggtagtgcaa
     4981 actcagctag caatattaat ataaatggaa ataaaaataa tattattagc actgatactc
     5041 aaaatactca aagttctaca gatagttctt gggcaggggg aaccgttaat tttagcactt
     5101 cagtaacgaa agttaaagat gcggtcaatc atattagggg aatgaattct aatcctacat
     5161 caagtacgaa tacaatgcat gttaatgaaa tcactgaaac aacgaggttt taattgaaaa
     5221 ttatgaaaat aatattttta cttttgagtt ttctctgttt tttaaaagca gagaactctg
     5281 caagtatatt tgatttgctc gataaaaaag aacagcaatt ttacatagaa aaagaatttg
     5341 ataatttaga aaaaaatcaa aaacaagagc gaattttgcc c
//
LOCUS       DAPPKW010000104         5280 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.104, whole genome shotgun sequence.
ACCESSION   DAPPKW010000104 DAPPKW010000000
VERSION     DAPPKW010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5280)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5280)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5280
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.104"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            163..1539
                     /locus_tag="RPW04_001764"
     CDS             163..1539
                     /locus_tag="RPW04_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDX6295842.1"
                     /translation="MIEKFSKIGFVLAMAGSAVGLGNAWKFPTMVGNNGGSAFILLYV
                     LLTLGIAVVVFLAELAIGKLGETDIVGSLYKLAPKHKKQWSLAGFFMITAVLIASFYM
                     IVIGWILKYIFMSFSTLPADTAAAGAAFGNLITNDFISVFICFTLVFLLVFYVVSKGI
                     KSGIERLNIWMMPSLFGLLVLLLLYSIFQSGGFVSAVQFLFIPDFSKLLNPSIILQAL
                     GLAFFSMSMGVGTVATYAASLPDGTNLIKSTFSIVSINILIGIMMGLVVFSFIPIQDG
                     QPASEGAGLIFVSLTSLFAQMGVVGNVLAIAFFISLLFAGVTSAVSMIEPFTLYLINK
                     FNISRKMSITFIGVLVYILGICCILSYYGDTSASFSLPKEIFATQKPVPFFDMLDFMT
                     SNVLMPIGALTFSIFVGWILKRDGLYILFSGFISKTWFEIWYFALRYVAPIAIIAIGV
                     YQLINKLN"
     gene            1567..3408
                     /locus_tag="RPW04_001765"
     CDS             1567..3408
                     /locus_tag="RPW04_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin attachment protein"
                     /protein_id="HDX6295843.1"
                     /translation="MAKKFIDVMDTTFRDGFQSVFGARVLMDDFLPAVSAAKEAGINH
                     FEFGGGARFQSLYFYLNEDAFLMMDKFRQAAGNDANLQTLSRGVNTVTLDTGSRELVD
                     LHAKLFAKHNTNTIRNFDALNDVKNLKYSGERIVHHGLKHEVVVTMMDLPPNCEGAHD
                     AAFYEKCLRDILNSDIKFHSVCFKDASGTSSPEKVYQTIKMARRLLGDSVHLRLHTHE
                     TAGVSVACYLAALEAGADGIDLAASPVSGGTSQPDILTMLHAVKGKNYDLGGLDVEKI
                     LKYEDVLHGCLKDYFMPPEATQVSPLIPFSPMPGGALTANTQMMRDNNILDKFPAVIK
                     AMREVVEKGGYGTSVTPVSQFYFQQAFNNVMFGPWKKIAEGYGKMVLGYFGKTPVTPH
                     QDIVELASKQLGLEPTNESAIDIADNDETKSLSYTKAILEKEGIEQTEENIFIAAACK
                     EKGVAYLKGEGKVMVRKISNMSKQVLNQAPKTKSEANKYSVVVNGSKYNVEVSDGFDN
                     FQIKSVTPATSKPAQATEKKDEPKTEQSSEISSGNGSSEIRATMSAGVFKILVKAGDT
                     VGKGQTVVVLEAMKMEIPVESPSAGVVSEILITQGQSVDDGQILIKL"
     gene            3568..5142
                     /gene="pckA"
                     /locus_tag="RPW04_001766"
     CDS             3568..5142
                     /gene="pckA"
                     /locus_tag="RPW04_001766"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002863221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HDX6295844.1"
                     /translation="MKDVDKLGLKDIKEIYHNLSYDKLFEHEKANGEGYITNSGTFGV
                     DTGIFTGRSPKDKYFVKQDPSQKYIAWGKVNKPISKEIFDKLLHKAQKQLSGKNIYIQ
                     DAYCGSSLASRKSVRFVTEVAWQAHFVKNMFIRPNQNELAEFKPDFVVYNACKCVDDN
                     YKEDGLNSEVFVVFNIEDNIAVIGGTWYGGEMKKGIFSMMNYWLPLENKLSMHCSANV
                     GKDGDTALFFGLSGTGKTTLSTDPNRALIGDDEHGWDDEGVFNFEGGCYAKCINLDPK
                     SEPEIYAAIKKDALLENVCCDECGCVDYGDASKTENTRVSYPIEHIENHEPSLKAGHP
                     KNIIFLTADAFGVLPPVSKLTKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEP
                     FMPLHPTVYARLLGEKIDKHQVNVYLVNTGWSGGAYGIGKRMSIKATRACINAILDGS
                     IKKCEFENFDKFNLSIPKELEGVETKLLNPINTWNDKNQYLAARDKLANMFVENFNRY
                     EDVEEGVQFAKAGPTN"
BASE COUNT         1857 a          840 c         1021 g         1562 t
ORIGIN      
        1 ttaagcaaat atccagctta tttgagttta aatataagcc ttgcatcaaa agattgtcaa
       61 aaagttacat tatcgataaa aaaaatattt ttttatcgcc gtaaaagtat ttaaaagaaa
      121 aaatttgtta aactaaccat atttaaatag aaggttttat aaatgataga aaagttttct
      181 aaaatcggct ttgttcttgc gatggcagga agcgccgtag gacttggaaa tgcttggaaa
      241 ttccctacta tggttggcaa taacggcggt tcggcattta tcttgcttta tgttttgcta
      301 actcttggta tagcggtagt tgttttttta gcagaacttg ctataggaaa actcggtgaa
      361 acagatatag taggctctct ttacaaacta gcaccgaagc ataaaaaaca gtggagttta
      421 gctggatttt ttatgataac cgctgtgctc atagcttcat tttatatgat agttatagga
      481 tggattttaa aatatatatt tatgagtttt agcactcttc cagctgatac ggctgcggct
      541 ggcgcggcgt ttggtaattt aataacaaat gactttataa gcgtatttat atgttttacg
      601 ctagtgtttt tactagtttt ttatgtagta tcaaaaggta taaaaagcgg tatagaaaga
      661 ctaaatattt ggatgatgcc atctttgttc ggactacttg tacttctact tttatactct
      721 atatttcaaa gcggaggatt tgtaagcgca gttcagttct tgtttattcc agatttcagc
      781 aaacttttaa atcctagtat catacttcaa gccttaggac ttgctttttt ctctatgtct
      841 atgggcgtag gtactgttgc tacatatgct gctagccttc cggatggaac gaatttgatc
      901 aaatcaactt tctccatagt atctataaat attttaatcg gtataatgat gggacttgtt
      961 gtattctcgt tcatacctat acaagatggt cagccagcca gcgaaggagc cgggcttatt
     1021 tttgtttcgc taacatcttt atttgcacaa atgggagttg tgggaaatgt cttagctata
     1081 gcatttttta tatctttact ttttgccggc gtaacctcag ctgtttctat gattgaacca
     1141 tttacccttt atcttataaa taaatttaat atatctagaa aaatgtcaat aacttttata
     1201 ggagtattag tttatattct tggaatatgt tgtatattat catattatgg agatacatct
     1261 gcttcatttt ctcttccgaa agagattttt gctactcaaa aaccagttcc attttttgac
     1321 atgctggatt ttatgacttc aaatgtgctt atgccgattg gagcattaac atttagtatt
     1381 tttgtcggtt ggattttaaa acgcgacggg ctatatatct tattctcagg atttattagt
     1441 aaaacttggt ttgaaatttg gtattttgca cttcgttatg tcgcaccgat cgcgataata
     1501 gctatcggcg tttatcagct aattaataag cttaattaat atctaatatt gtaaaaagga
     1561 aaataaatgg caaagaaatt tatagatgtg atggacacca catttcgtga tggttttcaa
     1621 tcagtctttg gcgctagagt cttgatggat gactttttac ccgcggttag cgcggcaaaa
     1681 gaagccggta taaaccactt tgaatttggc ggtggggcta gatttcaaag tttatatttt
     1741 tatctaaatg aagatgcgtt cttaatgatg gataaattta gacaagcagc aggaaatgat
     1801 gcaaatctac aaactctatc aaggggcgta aatacggtaa ctcttgatac aggaagtcgt
     1861 gagttagtag atctgcacgc aaaattattt gcgaaacaca acacaaatac cattagaaat
     1921 ttcgacgcgt taaatgatgt aaaaaatctt aaatatagcg gtgaaagaat agttcatcac
     1981 ggtctaaaac atgaagtcgt agttactatg atggatttac cgccaaactg cgaaggagct
     2041 cacgacgctg cattttacga gaaatgcttg agagatattt taaactcgga tatcaaattt
     2101 catagcgttt gttttaaaga tgctagcggt acaagcagtc ccgaaaaagt atatcaaact
     2161 ataaaaatgg ctagaagact acttggcgat tctgtgcatt tgcgtcttca cactcatgaa
     2221 accgcaggag ttagcgtagc ttgttattta gctgctcttg aagccggagc agatggcata
     2281 gatcttgccg cgtctccagt aagcggtgga acaagtcagc cagatatcct tactatgctt
     2341 cacgctgtaa aaggtaaaaa ctatgatctt ggcggacttg atgtagaaaa aatcctaaaa
     2401 tacgaagatg tattacacgg ctgtttaaaa gactacttta tgccacctga agctactcaa
     2461 gtaagtcctc ttataccatt ttctcctatg ccaggaggag cgcttacggc taatactcaa
     2521 atgatgagag acaataatat acttgataaa ttcccagcag ttataaaagc tatgagagaa
     2581 gtagtagaaa aaggtggata cggtacaagc gtaacccctg ttagccaatt ttacttccaa
     2641 caagcattta ataacgtaat gtttggacca tggaaaaaaa tagcagaagg ctatggaaaa
     2701 atggttcttg gatattttgg taaaactccg gttacgccgc atcaagatat agtagaactt
     2761 gccagtaaac aattagggct tgaacctaca aatgaaagtg ctatagatat cgccgataac
     2821 gacgagacaa aatcactttc ttacacaaaa gctattttag agaaagaagg cattgagcaa
     2881 accgaagaaa atatttttat agcagctgct tgtaaagaaa aaggcgtagc gtatctcaaa
     2941 ggtgaaggta aagttatggt tcgcaaaata agcaatatgt ctaaacaagt attaaatcaa
     3001 gcgcctaaaa caaaatcaga agcaaacaaa tatagcgtag tagtaaacgg aagcaaatat
     3061 aatgttgaag tttctgacgg atttgataat tttcaaataa aatcagtaac tccagcaact
     3121 agcaaaccag ctcaagctac agaaaaaaaa gatgagccaa aaacagaaca aagtagcgaa
     3181 atatccagcg gcaatggatc aagcgagata agagctacaa tgtctgctgg agtatttaaa
     3241 atacttgtaa aagctggaga taccgtagga aaaggtcaaa cagttgtagt gttagaggct
     3301 atgaaaatgg aaataccggt tgaatcacca agcgctggag tagtaagcga aatccttata
     3361 acccaaggtc aatcagtaga tgatggacag atactaataa aattataacc ccaaaaaaag
     3421 ccgtttgcac atagcgtgca gatggctact ttttaaattt tgaaatttat tatccaaaat
     3481 atacaaaata aaagagatat taagcaaaaa attactaaaa ttcatataga cttcaattaa
     3541 taaagattta caagaggtat aaccatgata aaggatgtag ataagctagg acttaaggat
     3601 ataaaagaaa tttatcataa tttaagctat gacaaactct ttgaacacga aaaagcaaat
     3661 ggtgaaggat atattacaaa tagcggaact ttcggcgtgg ataccggtat attcacgggc
     3721 agaagcccaa aagataaata tttcgttaaa caagacccga gtcaaaaata tatagcttgg
     3781 ggtaaagtaa ataaacctat cagcaaagag atcttcgaca aactactaca caaagcacaa
     3841 aaacaattaa gcggtaaaaa tatatatatt caagatgcat attgcggctc tagcttagct
     3901 agtagaaaaa gtgttagatt tgtaacagaa gtagcatggc aagcgcattt tgtaaaaaat
     3961 atgtttatcc gtccaaatca aaacgaatta gctgagttta aaccagactt cgtggtatat
     4021 aatgcttgca aatgtgttga tgacaattat aaagaagatg gactaaactc agaggtattt
     4081 gtagtattta atatagaaga caatatagcc gtcataggtg gaacttggta cggcggagag
     4141 atgaaaaaag gtattttttc tatgatgaac tactggcttc cgctagaaaa taaactatct
     4201 atgcactgct cagcaaatgt cggcaaagac ggagataccg cactattttt cggacttagt
     4261 ggcactggaa aaacaactct ttcaacagat cctaatagag ctttaatagg cgatgacgaa
     4321 cacggttggg atgatgaagg agtatttaac tttgagggcg gctgctacgc aaaatgtata
     4381 aatttagatc caaaaagcga acctgaaatt tatgcagcca taaaaaaaga cgcactttta
     4441 gaaaatgttt gttgcgatga atgcggctgc gtggattacg gtgatgccag caaaacagaa
     4501 aacacaagag taagctatcc tatagagcat atagaaaatc acgaaccgag cttaaaagca
     4561 ggtcatccaa aaaacattat atttttaaca gcagacgcat ttggagttct gcctcctgtt
     4621 tcaaaactta caaaagagca agctatgtac tactttttaa gtggatacac cgcaaaagta
     4681 gcaggaacgg aacgcggtat aaccgagcct caagctactt tttcagcatg ttttggagaa
     4741 ccgtttatgc cattgcatcc aacagtttat gcaagacttc ttggagaaaa aatcgacaaa
     4801 catcaagtaa acgtatattt agtaaataca ggctggagcg gcggtgctta cggtatcggt
     4861 aagagaatga gcataaaagc tactcgcgct tgtataaatg ctatacttga tggaagcata
     4921 aaaaaatgcg aatttgaaaa ctttgataaa tttaatcttt ctattccaaa agagctagaa
     4981 ggagtagaaa caaaactttt aaatcctata aatacttgga atgataaaaa ccaatactta
     5041 gcagctagag ataagctagc aaatatgttt gtggaaaatt tcaacagata cgaggatgta
     5101 gaagaaggcg tgcaattcgc aaaagccggt ccgacaaatt aaacttatat aaatttccgt
     5161 aactatttta aaattcggtt gcggaaattt atctattaaa tttaaaaatt aaattacctt
     5221 ttaaaataaa taatgttaaa ataatctctt ttttgatgaa taataataaa tttaatatag
//
LOCUS       DAPPKW010000105         5276 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.105, whole genome shotgun sequence.
ACCESSION   DAPPKW010000105 DAPPKW010000000
VERSION     DAPPKW010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5276
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.105"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..992
                     /locus_tag="RPW04_001767"
     CDS             <1..992
                     /locus_tag="RPW04_001767"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295845.1"
                     /translation="LPEFLKNYINKEITFDERYKNKNLALFGLPDFKFNYKKTVKMVE
                     KLNHIKLFFGKNISSYDAIRLALLQNYKMILEYKLKYLQGKDQSTLTNLRDALRVSYS
                     LMDIFKFAFDEKIISVFLDTFSQKIRKTTELIRANLLIDYTNTAGFELINSENYNKQR
                     QILEDETILLLSSDTFEKELKEWNIVLNDEDYFYASNNSTPIKTASAYRLRLEILKTI
                     KSIKRKKNYKQIYKQCRDLRAILWYFGDIFGNTNKMIKNLDNLIENLRFLSQCRLFEN
                     AKFKDNDSLEFFKKSLNLKILKTIKKADKKSQKITKKIGKFSKKLKVYYTKEI"
     gene            993..1709
                     /gene="ubiE"
                     /locus_tag="RPW04_001768"
     CDS             993..1709
                     /gene="ubiE"
                     /locus_tag="RPW04_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012109146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HDX6295846.1"
                     /translation="MEKQEKIIEMFNQIAPTYDKANRILSFGVDTSWRKNACCIVLDK
                     LKAKEINIVDVACGTGDMMNIWEQMANKKNIKISSMSGVDPSVGMLEVAKEKFPNYNF
                     ITALANDTSLPNDFADIISISYGIRNVVKREEALKEFNKILKPGGYVTILEFTKREQG
                     GFISKIRDFYLSKILPKIGGFISKNEAAYTYLPSSIENFLDKNSFCDELIKAGFEIEV
                     CKGFSFDISTLFIAKKVKQI"
     gene            1706..2869
                     /locus_tag="RPW04_001769"
     CDS             1706..2869
                     /locus_tag="RPW04_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDX6295847.1"
                     /translation="MTVSELNEQAKALLETHFSFVEVTGEISRLIRHSSGHWYFSLKD
                     EKSVISSAMYKFSNQQVKFEVKDGMQVTIYGKLTIYPPSGSYQLLANKMLPVGIGELE
                     LAFNQLKSKLENEGLFDIKFKKPLPKFPKKIAIVTSLTSAAYQDMLKVINSRYKLCEF
                     IAFNTLVQGEMAAANIIQMLQKADKMGFDAIVLARGGGSKEDLWCFNDENLARVIFTL
                     KTPIVSAVGHEIDYCISDFVSDHRSLTPTAAMVDLLPDANTILQSLDIAFDKFESFID
                     GKFQNSFNILNLINQSLKNQAISQKIEKANLTLENKKANLENLITSKINNLAHKIKEF
                     ELVFDRQEQFFKATKNMVQIEKNGKIMPLHELQIGDEISIYSQITKKNAIIKS"
     gene            2881..3960
                     /gene="serC"
                     /locus_tag="RPW04_001770"
     CDS             2881..3960
                     /gene="serC"
                     /locus_tag="RPW04_001770"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HDX6295848.1"
                     /translation="MTRVLNFSAGPSAIPLSVLEQAQKEFVSYKGMGFSIMEVSHRGK
                     VFDALHNNAIEKIKAFYGLNDDYSVLFLQGGATLQFAQVPMNIYNGGIAQYVNTGIWT
                     TKAIKEAKIQNINYEVVASSEETRFDRIPENIRFSDDADYAYICSNNTIYGTQYKDLP
                     NTKCPLVVDSSSDLLSREIDFSAKNIGLFYGGAQKNAGPAGVTLIIIKKDLANRVKHN
                     VPTPLRYTTQIEANSLANTPCTFGIYMFDLVLDWIKDQGGLSAINKLNEQKAALLYDT
                     IDTSSFYKAHAKTGSRSLMNVSFTTPSAELDAKFVSEAEKNSMIGLKGHRLLGGIRAS
                     IYNAVCLKDVQTLVSFMKEFERVNG"
     gene            complement(4090..4476)
                     /locus_tag="RPW04_001771"
     CDS             complement(4090..4476)
                     /locus_tag="RPW04_001771"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295849.1"
                     /translation="MISELNSMNTSQTSKISIQNLNNLKSPNSIQAKSSDKSSAQSVK
                     QAEEIDTSSGASSSIEAVKKMLEKRLEQLQKQLETIQKQIAQYQNDSNEYAQNILKEL
                     SQKASGLISQMAEVSASLAEIEKNKK"
     gene            complement(4597..5193)
                     /locus_tag="RPW04_001772"
     CDS             complement(4597..5193)
                     /locus_tag="RPW04_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018136071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HDX6295850.1"
                     /translation="MLVTNKAPALKGVAVLGNGQIDENFELYKNIGSKGAVVFFYPKD
                     FTFVCPSEIIAFDHRYKEFKERGIEVIGVSCDNEYCHFAWRETDVKCGGIGRVQFPLV
                     ADLKKEWAKGFDVLFDEAVALRGSFLLDKDGTVRHAVINDLPLGRNIDEMVRMVDTML
                     FTNEHGEVCPAGWSKGDKGMKPSTDGVASYLGENGDKL"
BASE COUNT         2000 a          816 c          871 g         1589 t
ORIGIN      
        1 tactacctga atttttaaaa aattatataa acaaagagat aacatttgat gaaagatata
       61 aaaataaaaa tcttgcactt tttggacttc ctgattttaa atttaattac aaaaaaacag
      121 taaagatggt agaaaaactt aatcatataa aactattttt tgggaaaaat ataagcagtt
      181 acgatgctat cagacttgct ttattacaaa attacaagat gattttagag tacaaattaa
      241 aatacctaca aggaaaagat caatccacat taacaaattt aagagacgct ttaagagtaa
      301 gttattcact tatggatatt tttaaatttg catttgatga gaagataata tctgtttttt
      361 tagatacttt tagccaaaaa atcagaaaaa caacagaatt aataagagca aatcttttga
      421 ttgattacac gaatactgct ggttttgagc taataaatag tgaaaactac aataaacaaa
      481 ggcaaatttt agaagatgaa actatactgc ttttaagctc agatactttc gaaaaagagc
      541 taaaagagtg gaatatcgtg cttaacgatg aagattattt ttatgcctcc aataactcta
      601 caccgataaa aaccgcgtcc gcttatagat tgagattaga aatactaaaa accataaaaa
      661 gtataaaacg caaaaaaaat tataaacaaa tatataaaca atgcagagat ttaagagcga
      721 ttttatggta tttcggagat atatttggaa atactaataa aatgataaaa aatttagata
      781 atctgataga aaatttaaga tttttgtctc aatgcagatt atttgaaaat gctaaattca
      841 aagataacga tagtcttgaa tttttcaaaa aaagtttaaa tttaaaaatc ctaaaaacta
      901 taaaaaaagc agacaaaaaa tcacaaaaaa tcacaaaaaa aataggcaaa ttctcaaaaa
      961 aactaaaagt atattacaca aaggaaattt gagtggaaaa acaagaaaaa atcatagaaa
     1021 tgttcaacca aatagcacct acttacgata aagccaaccg tattttaagc tttggagttg
     1081 ataccagctg gagaaaaaac gcttgttgca tcgtgcttga taaactaaaa gcaaaagaga
     1141 taaacatagt agatgttgca tgtggaacag gcgatatgat gaacatttgg gagcaaatgg
     1201 caaataaaaa aaatattaaa atatcttcta tgagcggagt tgatccaagc gttggaatgc
     1261 ttgaagtggc taaagaaaaa tttccaaatt ataacttcat aaccgctctt gcaaacgata
     1321 cttctttacc aaatgatttt gcagatataa taagcatcag ctacggcata agaaacgtag
     1381 ttaaaagaga agaagcgcta aaagaattta acaaaatctt aaaaccgggc ggttatgtga
     1441 cgattttaga atttacaaaa agagagcaag gtggatttat atcaaaaata agagattttt
     1501 atcttagtaa aattttaccg aagataggag gctttataag caaaaatgaa gcagcttata
     1561 catatttgcc tagcagcatt gagaatttct tagataaaaa tagcttttgc gatgaactta
     1621 taaaagccgg attcgagata gaagtttgca aaggttttag ttttgatata agcacacttt
     1681 ttatagcaaa aaaagtcaaa caaatatgac cgtaagtgaa ctaaacgaac aagctaaagc
     1741 gcttctagaa actcatttta gctttgtgga ggttactgga gagatttcaa gacttattcg
     1801 tcatagctcc ggacattggt acttctcatt aaaagatgaa aaaagcgtta taagctccgc
     1861 tatgtataaa tttagcaatc agcaggttaa atttgaagta aaagatggaa tgcaagtaac
     1921 gatctatgga aaattaacga tttatccgcc gagcggaagt tatcagttat tagcaaataa
     1981 aatgcttcct gttggtatag gagagcttga acttgcattt aatcagctta aatcaaagtt
     2041 agaaaatgag ggactttttg atataaaatt taaaaaacct cttcctaaat ttccaaaaaa
     2101 aatagccata gtcacaagcc taacatcagc agcctatcaa gatatgttaa aagtcataaa
     2161 ctcaagatac aaactttgcg agtttatagc atttaacact ttagttcaag gtgaaatggc
     2221 agctgcaaac atcatacaaa tgctacaaaa agccgataaa atgggttttg acgcaatagt
     2281 tttagcccgc ggaggcggta gtaaagagga tctttggtgc tttaacgatg aaaatttagc
     2341 aagagtgatt tttaccctaa aaactcctat agtctcggca gtaggacatg agatagacta
     2401 ctgtataagt gactttgtaa gtgatcacag aagcctgact ccgactgctg ctatggttga
     2461 tttgttaccg gatgccaaca cgattttaca aagcttagat atagcttttg ataaatttga
     2521 gagtttcata gatggcaaat ttcaaaactc atttaatata ctaaatttaa taaatcaaag
     2581 cttaaaaaat caagcaataa gccaaaaaat agaaaaagca aatttaactt tagaaaacaa
     2641 aaaagcaaat ttagaaaatt taataacttc aaaaataaat aatttagcac ataaaataaa
     2701 ggaatttgag ctggtatttg atagacaaga acagtttttc aaagccacta aaaacatggt
     2761 tcaaatagaa aaaaacggca aaataatgcc actccatgaa ttacaaatag gtgatgagat
     2821 atctatatat tcacaaataa cgaagaaaaa tgcgataata aaatcttaga aaggcaagat
     2881 atgacaagag ttttaaattt cagcgccgga cctagcgcga tccccttaag cgtattagaa
     2941 caagcacaaa aagagtttgt aagttacaaa gggatggggt ttagtattat ggaagtgagt
     3001 catagaggta aagtatttga cgcacttcat aataatgcaa tagaaaaaat caaagcattt
     3061 tatggtttaa acgatgatta ctcggtactt tttttacaag gtggagctac tttgcagttt
     3121 gcacaagttc caatgaatat atataacggc ggaattgcgc aatatgtaaa tacgggaatt
     3181 tggacaacaa aagccataaa agaggcaaaa atacaaaata taaattatga agttgttgcc
     3241 tcaagcgaag agaccagatt tgaccgtatc ccggaaaata tacgtttttc agacgacgca
     3301 gactatgcat atatatgctc aaataacact atttacggta cacaatacaa agatctacca
     3361 aatacaaaat gccctttagt agtagatagt agcagtgatc ttttaagccg cgagatagat
     3421 tttagcgcaa aaaatatcgg tctgttttac ggcggagcgc aaaaaaacgc gggaccggca
     3481 ggagttacgc taataatcat aaaaaaagat cttgcaaata gagtaaaaca taacgttcca
     3541 actccgcttc gatatacaac tcagatagaa gcaaactctt tagcaaatac gccttgtacg
     3601 tttggtatat atatgtttga tttagtgctt gactggataa aagatcaagg tgggttaagc
     3661 gctataaata aactaaatga gcaaaaagcg gctttattat acgataccat cgacacttca
     3721 agcttctaca aagctcacgc aaaaacaggt tcaagatctc ttatgaacgt aagcttcact
     3781 actcctagcg cagaacttga tgctaagttt gtgagcgaag cagaaaaaaa ctctatgata
     3841 ggactaaaag ggcataggct tcttggcgga attagagcat ctatatataa cgcggtttgc
     3901 ttaaaagatg ttcaaacatt agtaagtttt atgaaagagt ttgaaagagt aaatgggtaa
     3961 atttggttga ataactcata aatttaccta gaaaaatatc catttcttac taaataaata
     4021 tctaaattta tatattaaat ttagatattt tataaatcat aagctcaaaa agtcaatttg
     4081 atacaaattt tactttttat ttttctctat ttctgcaaga cttgctgata cttctgccat
     4141 ctgagagata agaccgcttg ccttttgaga aagttctttg agtatatttt gtgcatattc
     4201 attactatca ttttgatact gagctatctg tttttgaatt gtttctaact gtttttgaag
     4261 ttgttctaag cgtttttcaa gcatcttttt tacggcttca atgctactgc ttgcaccaga
     4321 agaagtatcg atttcttctg cttgcttaac tgactgagca gaggatttgt cagaagattt
     4381 tgcttgaatg ctgtttggtg attttaagtt atttaaattt tgtattgata tcttgcttgt
     4441 ttgagaggta ttcatactat ttaactcact aatcataata tctccttata aaatattaga
     4501 ttatatatcg tcaaaattgg tatttagtaa aattgtatta aaaaatgaat ttaaaaaagc
     4561 aagcctaaaa aaggcttgca aaatagtagt aatatattat agcttatcgc cgttttcgcc
     4621 aagataagaa gcaacaccat cggtagaagg cttcatacct ttatcgcctt tgctccaacc
     4681 tgcagggcaa acttcgccat gctcattcgt aaatagcatt gtatctacca ttcttaccat
     4741 ctcatcgatg tttcttccaa gtggaaggtc atttataacg gcgtgtctta ccgttccgtc
     4801 tttatctaat aagaaacttc ctcttagagc aactgcctca tcaaataaca cgtcaaaacc
     4861 ttttgcccac tcttttttaa ggtcggcaac taatggaaat tgaactcttc cgataccgcc
     4921 gcattttacg tcagtctctc tccatgcaaa gtggcaatac tcattgtcgc agcttacgcc
     4981 gataacttca atgcctcttt ctttaaactc tttatatctg tgatcaaatg ctataatctc
     5041 acttgggcaa acaaaagtaa aatcttttgg atagaaaaat actaccgcac cctttgatcc
     5101 tatgtttttg taaagttcga aattttcatc tatttgacca ttgcctaaaa ccgctacgcc
     5161 ttttaaagca ggcgctttat ttgtaactaa cataacctag ttctccttag taatttttat
     5221 ttttggcgaa attatatccc tgctatatta attaatttta aataatgata aataat
//
LOCUS       DAPPKW010000106         5260 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.106, whole genome shotgun sequence.
ACCESSION   DAPPKW010000106 DAPPKW010000000
VERSION     DAPPKW010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5260
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.106"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(75..386)
                     /locus_tag="RPW04_001773"
     CDS             complement(75..386)
                     /locus_tag="RPW04_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDX6295851.1"
                     /translation="MIEVLNLNIKAKNTQILHNISFISNSNLAILGSSGSGKSTLCKA
                     ICSILPNNVKADYAKLQTDEKPAYIFQDCISCFYPYLKIKDTFKTVLKNNAVKSYLKS
                     N"
     gene            complement(379..1161)
                     /locus_tag="RPW04_001774"
     CDS             complement(379..1161)
                     /locus_tag="RPW04_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDX6295852.1"
                     /translation="MKKITIYTTIFFGLIIILPMFAPFDPNEVNLNAIKLAPNLKNIL
                     GTDFLGRDELSRILFAFRNSIFIGLLSGVFAIIFAFGFAFLALNSPKIVKTFLMRFLD
                     AFLSLPNLLFILLFSAFSDKGFNIFTISLLLAIFSFGSGAKVIHDEFLSISKNEFILN
                     AKVLGAERFEIMFYEILPVAKNSVFVIFINICAHAISTEALLSFFGLGLMVGEASLGN
                     MLNEAAKAIFTGAWWLVLTPGLAIFVTILLLMLVGERVQKYD"
     gene            complement(1164..2114)
                     /locus_tag="RPW04_001775"
     CDS             complement(1164..2114)
                     /locus_tag="RPW04_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDX6295853.1"
                     /translation="MWIFAAKRAVQTIFLICIFSLFIFIMIEFSSGNIVSGLYGDNIQ
                     ALNPALKERILANLGLDRPLMVRYFEWFLNFIRGDFGFSFISGEKVIDIIKDRLPYTL
                     ILGTISFFLSFVLAVILGGLSAIFQGSLFDKIVMIITLSFFSVPSFWLSLIFIMFFSV
                     ILGIFPSSGAYDIGTQGNFIDLAHHMILPILVLSLSHLAIYIRLVRTTVLEALKEPFV
                     TSYRSWGVDKKDIYLKLVLRYSLLPVISYFGANSAVILSGTYVVETVFSIGGLGNTTI
                     NALLDKDYPLALIIILLSTIFVVFINLIVEISAKILNPRF"
     gene            complement(2114..3649)
                     /locus_tag="RPW04_001776"
     CDS             complement(2114..3649)
                     /locus_tag="RPW04_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDX6295854.1"
                     /translation="MIRNLILASLLAINIFAATPKDTIVIGIENETSRINPLFDEDHD
                     TALDFVFSGLTKFTPDMKIEPDLAKSWKVSEDGLVWTFYLRDDALWHDGEKFSAEDVK
                     FTIEQALNDKLNAPAKASFEEVQSVEVINKYELKIMLKSPFPPLLDALSIGVLPKHIL
                     DGKDINSDKFNQNPIGTGPFKFKKWQKGSYISFEANKDFYRGKPKADKVILKIVPDYN
                     IRTYEIKRGDLDVALIESNLVKELQNDKNIKIMKLDSADYRALMFNFDNEILKSLAVR
                     QAINYAIDRELIATKILHGYGFSANNPIQKSWANDKNAKIYEYNIEKAKEILANDGWE
                     LKNKVLQKNGKRLEFDIYAFNGDPFRVTLANIIQSELSKIGIKARAIAKNHGAFEIDK
                     VDSFIIGWGSPLDPDVQTYRVFSSKMDAAKNENGWNYNHYSDKTVDETLLKARTTDKT
                     EERKLWYSKFINALHEDPPFAFLVYLQYPLAYSDKISGIKPTILGHHGARFTHNIEEW
                     SKN"
     gene            complement(3784..4509)
                     /locus_tag="RPW04_001777"
     CDS             complement(3784..4509)
                     /locus_tag="RPW04_001777"
                     /inference="COORDINATES: protein motif:HMM:NF024503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDX6295855.1"
                     /translation="MRELIRTYFNHKTQAFFISSIIFLPIILLFYQATSILRLEFQNH
                     KEESFVLSMQDFIAPPVQNSPMPTPDIPHIAEPTVDKIEPIKPKPIKKTVKKIQKHIN
                     KQIKTEFTHKVETAKTADIQNIEQIPRISPSQTNIAPKNTVQTLTYGKSDNPHLKEIK
                     AAIDKAGFYPRQARRMRMSGEVWVEFLWLKRGILKDLKVSKSSGYELLDLSAMETIKI
                     ASKEFPALNEDARLSVPIVYRLK"
     gene            complement(4506..4895)
                     /gene="exbD"
                     /locus_tag="RPW04_001778"
     CDS             complement(4506..4895)
                     /gene="exbD"
                     /locus_tag="RPW04_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HDX6295856.1"
                     /translation="MIKLPKNEGLNIIPFIDIILVLLAIVLSISTFIAQGKIKVDLPQ
                     SQSAQSLEDDKNRLSIIIDKDNKFYLDENEASVEDLKNRIQTLNPDTLVELKSDKDAK
                     FSSFVVIVDSLKLKGHDKFQIVTEKEQ"
     gene            complement(4879..>5260)
                     /gene="exbB"
                     /locus_tag="RPW04_001779"
     CDS             complement(4879..>5260)
                     /gene="exbB"
                     /locus_tag="RPW04_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HDX6295857.1"
                     /translation="AFIAIWCVIERVLFLNKIDINEYNNQEDLEDSISENLTTLYIIY
                     SNAPYVGLLGTVIGIMITFYDMSLAGNIDVKSVVSGLSLALKATALGLFVAIPSLIAY
                     NALLRKVNLVINRYKTRKSNDKIA"
BASE COUNT         1684 a          908 c          770 g         1898 t
ORIGIN      
        1 tcaaatttac cagtttgatt ttgctaaaaa taccctcaaa tatcgctaaa atcaatcttt
       61 aagctatttt tatatcagtt agattttaaa taactcttta cagcattatt ttttaaaacc
      121 gttttaaacg tatcttttat cttgagatat ggataaaagc agcttataca gtcttgaaat
      181 atataagcag gtttttcatc tgtttgcagt ttagcataat cggcttttac gttatttggc
      241 aaaatagagc agatggcttt acaaagcgta ctttttccgc ttccgctgct acctaagatt
      301 gctaaatttg agtttgagat aaaactgata ttgtgtaaaa tttgagtatt cttagctttt
      361 atgtttaaat ttaaaacctc aatcatattt ttgcactctt tctccaacta gcatcagcaa
      421 taaaatagta acgaaaatag ccaatcctgg tgtcaaaaca agccaccaag cacctgtaaa
      481 tatcgctttt gcggcttcat ttagcatatt tccaaggcta gcttcgccaa ccataagccc
      541 aagcccaaaa aaactaagca gcgcttctgt gcttatggca tgagcgcaga tatttataaa
      601 tatcacaaat acgctatttt tagccaccgg taaaatttca taaaacataa tctcaaatcg
      661 ctcggcacca agaacttttg cgtttagtat aaactcgttt ttgcttatgc ttaaaaactc
      721 atcatgtatc acttttgcac cgcttccaaa ggaaaatatc gccaaaagta aacttatagt
      781 aaaaatatta aatcctttat cgctaaatgc actaaatagc agtataaata gtaaattagg
      841 cagagataaa aacgcatcta aaaaacgcat taaaaaagtt tttacgattt ttggcgaatt
      901 aagtgccaaa aaagcaaaac caaaagcaaa aattatggca aaaactccgc ttaaaagtcc
      961 tataaaaatt gaatttctaa atgcaaataa aatcctagaa agctcatctc ttcctaaaaa
     1021 atccgtacct aaaatatttt ttaaatttgg agctaatttt atagcgttta aatttacttc
     1081 atttggatca aacggtgcaa acatcggtaa aattattatc aatccaaaaa aaatagtcgt
     1141 ataaatagta atttttttca ttgctaaaat ctcggattta agattttggc tgatatttcg
     1201 actattaaat ttataaaaac tacaaagata gtgcttaaaa gtatgatgat gagtgctaat
     1261 ggataatctt tgtctaaaag tgcgtttatg gtcgtattcc caagtcctcc gatggaaaaa
     1321 acggtttcta cgacataagt tccacttaaa atcaccgcgg agtttgcgcc gaaataactt
     1381 ataacaggca ataatgagta tcttaaaaca agttttagat aaatatcttt tttatcgact
     1441 ccccaagatc tgtagctagt aacaaaaggt tctttcaagg cttctaaaac agtagttcta
     1501 actagtctga tatatatggc aagatgagat aaactaagaa ctaaaatcgg aagtatcata
     1561 tgatgtgcta aatctataaa attcccctgg gttcctatat catatgctcc tgaactagga
     1621 aaaattccta aaataacact aaaaaacatt ataaaaataa gactcagcca aaaactagga
     1681 acgctaaaaa acgataaagt tattatcata actattttat caaataaaga accttgaaaa
     1741 atagcgctaa gacctcctaa aattacggct aaaacaaagc taagaaaaaa acttattgtg
     1801 ccaagaatga gagtataagg aagcctgtct tttatgatat ctataacttt ttctccgctt
     1861 ataaagctaa atccaaagtc gcctcttata aaatttaaaa accattcaaa atatcgcacc
     1921 attagaggtc tatcaagtcc taaattagct aagattctct cttttaaagc tggatttaag
     1981 gcttgaatgt tgtctccata aagtcctgat acgatatttc cactagaaaa ctctatcatt
     2041 ataaatataa ataagctaaa aatacaaatg agaaaaatag tctggactgc tcttttagca
     2101 gcaaatatcc acactaattt ttactccact cttctatatt atgagtaaat ctggctccat
     2161 gatgaccaag aatagtaggc ttaataccgc ttattttgtc gctgtacgct aatggatatt
     2221 gcaaataaac taaaaatgca aacggcggat cttcatgtaa ggcgtttata aatttagaat
     2281 accatagttt tctctcttct gtcttatctg tcgttctagc ttttaaaagt gtttcatcaa
     2341 ccgttttatc gctataatga ttgtaattcc aaccgttttc atttttggcg gcgtccattt
     2401 tagagctaaa tactctataa gtttgcacat caggatcaag cggacttccc cagccgataa
     2461 tgaaactatc tactttatct atctcaaatg ctccgtgatt tttagctata gctcgagctt
     2521 ttatgccgat tttagataat tcgctttgga tgatgttggc aagtgttact ctgaacggat
     2581 cgccattaaa tgcatagata tcaaactcaa gtcgtttccc gtttttttgt aaaaccttgt
     2641 tttttagctc ccagccatca tttgctaaga tctctttagc tttttctatg ttgtattcat
     2701 atatttttgc gtttttatcg tttgcccagc ttttttgtat aggattatta gcgctaaatc
     2761 catatccatg aagtattttc gtagcgatca attccctgtc tatagcataa ttgatagctt
     2821 gtcttacggc caaagatttt agtatttcat tatcaaaatt aaacatcaaa gccctataat
     2881 cagcactatc tagtttcatg attttgatat ttttatcatt ttgcaactct tttactaaat
     2941 ttgattctat aagagccacg tcaagatcgc ctctttttat ctcatatgtt cttatattgt
     3001 aatcaggcac gattttaaga attactttat ctgcttttgg tttacctcgg taaaagtctt
     3061 tgttggcttc aaaacttata tagctgcctt tttgccattt tttaaattta aatggaccgg
     3121 tgccgatcgg attttgatta aatttatcac tatttatatc tttgccatct aaaatatgtt
     3181 ttggtaaaac tcctatgcta agcgcatcaa gaagtggtgg aaacggtgat tttaacatga
     3241 tttttaactc atatttattt atgacttcta cactttgaac ctcttcaaaa ctcgctttag
     3301 caggagcatt tagtttatca tttagtgctt gttctatagt aaatttaaca tcttcggcgc
     3361 taaatttttc tccatcgtgc caaagtgcat catctcttaa gtaaaacgtc cagacaagac
     3421 cgtcttcgct tactttccag ctttttgcca agtctggttc gattttcata tccggagtaa
     3481 atttggtaag tccgctaaat acaaaatcaa gagcggtatc gtgatcttca tcaaatagcg
     3541 gatttatgcg cgatgtttcg ttttctatac cgattactat cgtatctttt ggtgttgcgg
     3601 caaaaatatt aatagctaat aaacttgcta aaatgagatt tctaatcata atgtttcctt
     3661 gtgttgattg gtaatattga ttgtatttta atattatctt acttaaatat atattagata
     3721 attttattta atatataaat ttagaagaat ttttaaattt gattgtattt taaatttagt
     3781 ttattatttt aagcgataaa ctatcggtac tgataatcta gcatcttcat ttagcgcggg
     3841 gaactctttt gaagctattt ttatagtttc catagcactt aaatctagta gctcataacc
     3901 tgaacttttg cttactttta ggtcctttaa aatacctctt tttagccata aaaactctac
     3961 ccaaacctct ccgctcattc tcattcttct tgcttgtctc gggtaaaaac ctgctttatc
     4021 gatagcagct ttaatctctt ttaaatgagg attatcactt ttaccgtatg taagagtttg
     4081 aaccgtgttt ttaggtgcga tatttgtttg agatggtgaa atacgcggga tttgttcgat
     4141 gttttgtata tctgctgttt tggctgtttc tactttgtgc gtaaattcgg tttttatctg
     4201 tttattgata tgtttttgta tctttttaac cgttttttta ataggttttg gttttatagg
     4261 ctctatttta tctaccgtag gttctgctat atgaggtata tcaggagtcg gcataggcga
     4321 gttttgcaca ggtggagcta tgaagtcttg catacttagt acgaaactct cttctttatg
     4381 gttttgaaac tctaacctta aaatcgaagt agcttggtaa aacaataaaa taataggtaa
     4441 aaatataata gatgatatga aaaatgcttg agttttatgg ttaaaatatg tgcgaataag
     4501 ctctctcatt gctctttttc cgtaactatc tgaaatttat cgtgtccttt tagcttcaag
     4561 ctgtccacta tcacgacaaa actgctaaat ttagcgtctt tatcactttt tagctcaact
     4621 aaagtgtctg gatttaatgt ttgaattcta ttttttagat cttctacact tgcttcattt
     4681 tcgtctaaat aaaatttgtt atctttatct attattatag aaagtctatt tttatcgtct
     4741 tctaagcttt gtgcagattg gctttgcgga agatctactt ttatctttcc ttgagctata
     4801 aacgtagata tactaagcac tattgctaat aaaactagga taatatcaat aaacggaatg
     4861 atatttaaac cctcattttt aggcaatttt atcattagat ttccttgtct tatacctgtt
     4921 gattaccaaa tttacttttc ttaaaagagc attgtaggct atcaaactag gaatagcgac
     4981 aaaaagtcca agagctgtag ctttaagagc caaagataga cctgaaacta cagattttac
     5041 gtcgatattt cctgctaagc tcatatcgta aaatgtgatc ataatgccta taactgtacc
     5101 taaaagtcct acatatggag cattagaata tatgatataa agcgtggtta aattttcact
     5161 tatactatct tctaaatctt cttgattgtt atattcattt atatctattt tatttaaaaa
     5221 taatactctt tctataacac accaaatagc tataaaagcc
//
LOCUS       DAPPKW010000107         5230 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.107, whole genome shotgun sequence.
ACCESSION   DAPPKW010000107 DAPPKW010000000
VERSION     DAPPKW010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5230)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5230)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5230
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.107"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..544
                     /locus_tag="RPW04_001780"
     CDS             <1..544
                     /locus_tag="RPW04_001780"
                     /inference="COORDINATES: protein motif:HMM:NF015549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HDX6295858.1"
                     /translation="TSIVIYAGSVEFLLVAFIVSGSSLSSVFFISFLLNFRHFFYTMA
                     MLNEIKSLKNRIYFIYALTDETFAILKSRKQNSDENRNLIFNMTALLNQSYWIFGVNL
                     GAILGSSLNVSYKGIDFSLSALFAILTYQVFKNNPNKSVLFLGIGCSIIGLFIFPQQY
                     FLFGTLIFAVVILLLFKRYF"
     gene            544..855
                     /locus_tag="RPW04_001781"
     CDS             544..855
                     /locus_tag="RPW04_001781"
                     /inference="COORDINATES: protein motif:HMM:NF017273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HDX6295859.1"
                     /translation="MEYLPYILLAGFATILTRFLPYWLFKKRSDNKTLLYLQQTTTLI
                     IMIVLLFYALRSMEFSTFNLGFSAIFCLFLVFALQIWKKNSLISIMVPTIIYMIIIRF
                     V"
     gene            1033..2184
                     /locus_tag="RPW04_001782"
                     /pseudo
     CDS             1033..2184
                     /locus_tag="RPW04_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344658.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase small subunit"
     gene            2188..3909
                     /locus_tag="RPW04_001783"
     CDS             2188..3909
                     /locus_tag="RPW04_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HDX6295860.1"
                     /translation="MSEQRIVVDPITRIEGHLRIEVVVDDNSVVKEAYSGSTLWRGIE
                     TIVKGRDPRDAGFMTQRICGVCTFSHYRAGIEAVENALGIVPPLNAKLTRTLMNAALF
                     LHDHPVHFYQLHALDYVDVVSALSADPKKASEEAFKYSEYPYACGADQLKLVQDKVKK
                     FVEKGNLGPFANAYWGHSTYKFTPEQNLIALSHYLECLRLQRTIAQAMAVFGAKQPHP
                     QSLTVGGVTCIMDLQDPARLGEYMVKFQEMADFINRAYYADLVMAAKAYASEPSVLND
                     VGTPNLITYTDFQLGANEYLFEGGYILNGDVSKVYEVDENKITEEATRSWYKNDAPLH
                     PYDGQTEPNYTGFKDAQTMNAKGEMEDTKVFDIAGKYSWIKAPRYDSVPMQVGPIANI
                     VINYAKGNKNVVPVVDKFLKDTGLPLSAVFSTLGRTACRMIEATIVANNALKAFNNLI
                     ENLKVDQSTCAKYVIDNNKEYKGRFIGNVPRGMLSHWCRIKNGVIENWQAVVPSTWNA
                     SPKDSKGQMASYEACLVGLKIADLKQPLEIIRKIHSYDPCIACAVHVMDTKGNKLSEY
                     KVNPNLI"
     gene            3920..4597
                     /gene="cybH"
                     /locus_tag="RPW04_001784"
     CDS             3920..4597
                     /gene="cybH"
                     /locus_tag="RPW04_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase, b-type cytochrome subunit"
                     /protein_id="HDX6295861.1"
                     /translation="MKESKKHIAEYEFSIGLRVTHWIRAICITILIVSGFYLAYVFVS
                     PAITSEPTNFMNAKWRAVHQIVGFILIGCFIFKVYLFFFDRQSKIERVSVKDFLSPKI
                     WIAQIKYYLFLGKHPHLHGTYNPLQFIAYIMFYIILLVVCLTGLVLYAHVYHNGLGGL
                     IYEPMRVVESWMGGLANVRLIHHISMWAIMVFVVVHVYMAVFNAIKGKDGAIDAIISG
                     YKFPKEQ"
     gene            4602..5141
                     /locus_tag="RPW04_001785"
     CDS             4602..5141
                     /locus_tag="RPW04_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HDX6295862.1"
                     /translation="MRVLILGIGNVMFADEGIGVHFTKMIEKNFKFSSSKHSLDFVDG
                     GTLANLLSPIIAKYDYVIVVDCIDADNGDIGDVYFFDFDDMPKSINWSGSAHEVEMLQ
                     TLEMMDLIGDRPQTKILGVIPKRIEPMSFELSNEVKASSCTMEKVILKHLKELGFDYE
                     KVADFTVQTIADEWKKEQF"
BASE COUNT         1712 a          746 c         1048 g         1724 t
ORIGIN      
        1 tactagtatc gttatttatg caggaagcgt cgagttttta cttgtagctt ttatcgtatc
       61 tggatcatct ttgagtagcg tttttttcat atcctttctt ttaaatttta gacatttttt
      121 ttatactatg gctatgctta atgagataaa atctttaaaa aatcgtatat attttatcta
      181 cgctttgact gatgaaactt ttgctatact aaaatcacga aaacaaaata gtgatgaaaa
      241 cagaaattta atttttaata tgacggcttt actaaatcaa agctactgga tttttggagt
      301 caatctaggc gctatacttg gttcaagctt aaatgtatct tacaaaggga ttgattttag
      361 tcttagtgct ttgtttgcta tattaactta tcaagttttt aaaaataatc caaataaaag
      421 tgtcttattt ttaggtattg gatgttctat aatagggctt tttatatttc cacagcagta
      481 ttttttattt ggcactctta tatttgcagt ggtgatttta ttgcttttta agaggtattt
      541 ttgatggagt atttgccgta tattttgtta gccggttttg ctactattct tactagattt
      601 ttgccttatt ggttgtttaa aaaacgctca gataataaaa ctttgttgta tttgcagcag
      661 actactactt tgatcataat gattgtttta ctattttatg ctcttagaag tatggagttt
      721 tctacgttta atttaggttt tagtgctata ttttgtctat ttttggtatt tgctttacaa
      781 atttggaaga agaattcttt aattagtata atggttccta ctataattta tatgatcatt
      841 ataaggtttg tttgataaat ttaaagcacg taaaaagata tcagataata ttttttagaa
      901 atttttaagc ttaaagtaac attatgttat tcaattaaaa taaatttatt aaaataatta
      961 agataaatcg ttgtaaaatt acaaagacaa aaaatttatt ttataaattt atcttattat
     1021 caaggagaag ttatggttga gcacaaactc ttaaatacca tacaagatag actagactct
     1081 ttatcaaaga tgcctaaaat caaaaaaaat agctcaatag cccaagcgct taaagaaaac
     1141 ggctttaccc gtagagactt tatgaaatgg gctggagcta tgacggcact tatggctctt
     1201 ccggctagtt ttgctccggt tgttgcaaaa gcagctgagc ttgcagatag acttccggtt
     1261 atttggttgc atatggcaga atgtacagga tgtagtgaga gtcttttaag gacagatgct
     1321 ccaactatag atagtttgat atttgattat atcagccttg agtatcatga gaccgttatg
     1381 gctgcttctg gatggcaagc tgaagagaat cttgaaaatg ccatagagaa atataaagga
     1441 aaatatgttt taatggtaga aggcggaata cccgatggag atagctcgtt ttatctaaca
     1501 gttggaccaa aaggcactac tggaagagag cacgctatac atgctagtga taatgctttg
     1561 gcgatatttg ctattggtac ctgttcgagt tttggaggca tataagcagc aagaccaaac
     1621 ccaacaaatg caagaccgct tcataaaatt acaaacaaac ctgttataaa tgtgcccggt
     1681 tgtccgccaa gcgagaaaaa tatcgtagga aatgttttaa atttcttact atttggaacg
     1741 cttcctgcgc ttgatgtata taatcgtcca aaatgggctt acggtcttag aatccatgat
     1801 ctttgcgaga ggcgcggtca ttttgatgct ggagagtttg tacaagaatt tggcgatgat
     1861 ggtgcaaaaa atggttattg tttatacaaa gtaggctgca aaggaccata tacatttaat
     1921 aactgctcac gcgaaagatt taatcaacat acaagctggc ctatccaagc aggtcatggt
     1981 tgtataggtt gttccgagcc tgatttttgg gataaaatgg gaccttttga aaagcctctt
     2041 ggagatagat tatacgaaac ggtatttgag ggacttggag cagacgctat aactgataaa
     2101 ataggtatag gtgtattagc tataacagga gttgctatag cggctcacgc tttgatatca
     2161 acagctacaa aagataagga gtaatacatg agcgagcaaa gaatagtagt agatccaata
     2221 acaagaatcg aaggacacct tagaattgaa gttgttgttg atgataatag tgtcgtaaaa
     2281 gaagcttata gcggctcaac tctttggaga ggtattgaaa ctatagtaaa aggcagagat
     2341 ccaagagacg ccggatttat gactcaaaga atttgtggtg tttgtacatt ttcacactat
     2401 agagcaggaa ttgaagctgt tgaaaatgct cttggtatag ttcctccttt aaatgcaaaa
     2461 ttaactagaa cacttatgaa tgcggctctg tttttacacg atcatcccgt acatttttat
     2521 caactccacg cgcttgatta tgttgatgta gttagcgctc ttagtgcaga tcctaaaaaa
     2581 gctagcgaag aggcgtttaa atatagcgaa tatccttacg cttgcggcgc cgatcaacta
     2641 aaattagttc aagataaagt taaaaaattt gttgaaaaag gaaatctcgg accgtttgcg
     2701 aatgcttact ggggacattc tacttataaa tttactccag agcaaaatct tatagctctt
     2761 agtcactatt tggagtgttt aagactccaa agaacaatag cgcaagctat ggccgtattt
     2821 ggtgcgaaac aacctcaccc gcaaagttta acagtaggcg gcgtgacttg tattatggat
     2881 ttacaagatc ctgcaagact tggcgaatat atggttaagt ttcaagagat ggctgatttt
     2941 ataaatcgtg cttattacgc tgatttggtt atggctgcta aagcgtatgc gagcgagcca
     3001 agcgttttaa atgatgtagg aactccaaat ttaattactt atacagattt tcaattagga
     3061 gcaaatgagt atctatttga aggtggatat atactaaatg gagatgttag taaggtttat
     3121 gaagtagatg aaaataagat aactgaagaa gctacgagat catggtataa aaatgatgct
     3181 ccacttcatc cttacgatgg acaaacagag ccgaattata ccggatttaa agatgctcaa
     3241 actatgaatg ctaaaggtga gatggaagat actaaggtat ttgatatcgc aggaaagtat
     3301 agctggatta aagctccaag atatgattct gtgcctatgc aagtaggacc tatagcaaat
     3361 atcgttataa actacgcaaa aggaaataaa aacgtagttc cagtagtaga taaattctta
     3421 aaagacaccg ggcttccttt atctgcagta ttttctactt taggaaggac ggcatgccgt
     3481 atgatagaag ctactatagt agctaataac gcactaaaag catttaataa tttgattgaa
     3541 aatctaaaag tagatcaatc aacttgcgcc aaatatgtta ttgataataa taaagagtac
     3601 aaaggaagat ttataggaaa tgttcctaga ggtatgctta gccattggtg tagaattaaa
     3661 aatggcgtta tcgaaaattg gcaagcagtt gttccttcaa cttggaatgc aagtccaaaa
     3721 gatagtaaag gacaaatggc aagttacgag gcgtgtttag taggtcttaa aatagctgat
     3781 ttaaaacagc ctttagagat cattcgcaaa attcactctt atgatccttg tatcgcttgt
     3841 gctgttcatg ttatggatac taaaggtaat aagttaagcg aatataaagt taatccaaat
     3901 ttgatttaaa ggagcgaata tgaaagagag taaaaaacat atcgccgaat atgagttttc
     3961 tataggactt agagtaacac actggataag agctatatgc atcactatac ttatagtcag
     4021 cggattttat ctggcttatg tgtttgttag tcctgctata actagcgagc ctacaaattt
     4081 tatgaatgct aaatggcgtg cagttcatca aatagtcgga tttatactta taggctgctt
     4141 tatttttaaa gtttatctat ttttcttcga tagacaaagt aaaatagaaa gagtcagcgt
     4201 gaaggatttt ttaagcccaa aaatttggat agctcagata aaatattatc tatttttagg
     4261 taagcatcca catctgcacg gtacttataa tcctctgcaa tttatagcat atataatgtt
     4321 ttatataata ttacttgtag tgtgtttaac tggacttgta ctatatgctc atgtttatca
     4381 taacggtctt ggaggtctta tttacgagcc tatgagagtt gttgagtcat ggatgggcgg
     4441 attggctaat gttcgtttga tacatcatat atctatgtgg gctataatgg tgtttgtagt
     4501 agttcatgtt tatatggctg tatttaatgc tataaaaggc aaagatggag caattgacgc
     4561 cattataagc ggttataaat ttccaaaaga gcaataagca tatgcgtgtg cttattttag
     4621 gtattggtaa tgtaatgttc gccgatgagg gtatcggcgt tcattttaca aaaatgatag
     4681 aaaaaaactt caaatttagt tcttctaaac atagcctaga ctttgtagat ggaggaactt
     4741 tagcaaatct tctaagtccg attatcgcaa aatatgatta tgttattgtt gttgattgca
     4801 ttgatgccga taacggtgat atcggagatg tgtatttttt tgattttgat gatatgccaa
     4861 aaagtataaa ctggtccggt tctgctcacg aagtagagat gcttcagacg ctagaaatga
     4921 tggatttgat aggtgataga ccgcaaacta agatactcgg cgttatccca aaaaggatag
     4981 aacctatgag ttttgagctt agcaacgagg taaaagctag ctcatgcact atggaaaaag
     5041 ttattttaaa acatttaaaa gagcttggat ttgattatga aaaagttgcg gattttaccg
     5101 ttcaaactat tgcagatgaa tggaaaaagg agcaattttg atacttcatt ttgagtttaa
     5161 atttaataat aatcaaaaaa ctttagcttt ttttcttgag tattgggcta aaaaaagtgg
     5221 tttggattat
//
LOCUS       DAPPKW010000108         5203 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.108, whole genome shotgun sequence.
ACCESSION   DAPPKW010000108 DAPPKW010000000
VERSION     DAPPKW010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5203
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.108"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..959
                     /locus_tag="RPW04_001786"
     CDS             <1..959
                     /locus_tag="RPW04_001786"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295863.1"
                     /translation="FASSKQQINDSKDQIQNEWVMWLYEREIFKYLNSISLAITECGE
                     TFAPGVTTFYIAHTISLAENNFLNPKIYKSQFYRYMMNSDFIVISSKQDYDYIQNLSK
                     EIFGSEDMSHKLLKFGNPSLEQSILSYGDFKKTEKKVVLLSFNIITYENPNSIIKLID
                     ALLQKDIEVYFRPHPVLKEHSISIYIKNRYENDRNFIFDSTVKFSNELKSKVTTIISD
                     VSSMAHTFPLTTLKPAIIYIDDESNFYQNIDEIVRNPIQIHAKNPSECIELINKIYNN
                     QDIFKSDISSFRSKNIYNDIDSQDSTSKKIANFIDEIIRLKH"
     gene            1053..1910
                     /locus_tag="RPW04_001787"
     CDS             1053..1910
                     /locus_tag="RPW04_001787"
                     /inference="COORDINATES: protein motif:HMM:NF013257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDX6295864.1"
                     /translation="MKILIIKLGYSETFIDDNSRVVSLGDVLRATPIIEALHQKYNNA
                     KISWLTSQEAFTLINGAKFLSETIIYNDKFSGEFDVVINLEKFDEIFELLKRIKSKQI
                     VGFIKENNCLNISPKNDKILKYIKESGSYRVWQELIFDMLGLKWQNQKYNLGYKPKNG
                     ILHEVGLNYLVGSKWPTKAMSLIKWNELANILNKLNINFSWQEGKENLKEYIEWINSC
                     ETIITQDSLGMHIAMALDKRVIALFGPTNYMEIYPYGQTDIINVDWSYKNPSMDSLNL
                     QDILNLIKG"
     gene            1914..3146
                     /locus_tag="RPW04_001788"
     CDS             1914..3146
                     /locus_tag="RPW04_001788"
                     /inference="COORDINATES: protein motif:HMM:NF012745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDX6295865.1"
                     /translation="MFSIVITTYNRSKLLKRCLDSIKNQTFNRYEVLILDDCSSDDTS
                     EMVKEYTNDSKFMYFKAESNYGSSNLIFNEYIVKQKLNKYEYILYMSDDDFLDKNSLL
                     ESYNLINKYGHIDVILCKISFNYGDIIVQSPDDGSTSEYFEFSDQNSHKALSKYRFMY
                     HNNLNYKTDMYDYNQTATYEVPYYKMYQNKKIGYSKNIIYIFDISSENREKYLDIKNY
                     IMALGELCYREINFINNKKEAKNIFKSNLLLRINCEGNFLSSFDAFPANVVVEYLSRF
                     IDQDNFYDILDKFATFMKDSFQPSFDETYHKLNSKLYTYEERNDIIKNSKTFMIYCQN
                     EWGKQIKEQFIKQGLECLGFIDDANSMSCAEFLKSGLEPDFVFIATGKPKLMSDLINN
                     LQPYKGKVLTLHEKDDSL"
     gene            3143..4006
                     /locus_tag="RPW04_001789"
     CDS             3143..4006
                     /locus_tag="RPW04_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006655343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDX6295866.1"
                     /translation="MKKTFSFGKNWLRYVKYILNEDIIQNASNSLTKFISNSEFKNKI
                     FIDIGCGSGLFSLCALRLGAKKVISFDMDLNSVQAANLCKQKFAPDSTNWDILQGSIL
                     DLNFLKNLELALKNEQIIVYSWGVLHHTDDLNSAMLNAANLAKLGGGMAYIAIYNKTE
                     ASPFWLKIKKFYNSTNIIMKFLMVSAYTIFLTFEDIRKGRGLNMKDKSRGMHKITDVI
                     DWLGGYPYEPATANEINDFWGKLGFECTKFAPTKYREPIYPKSFFYKYFVYLKQVGTG
                     CNEFVFKSKNV"
     gene            3999..>5203
                     /gene="asnB"
                     /locus_tag="RPW04_001790"
     CDS             3999..>5203
                     /gene="asnB"
                     /locus_tag="RPW04_001790"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HDX6295867.1"
                     /translation="MCRIAGGFATDLKDKIKQIAYALRNGGENEARFYFDQNFALSHN
                     RLAIIDLSHNADQPVQNERFVLCFNGEIYNYKEIARDLELDDKFKNSDTLVLLAAYSK
                     WGKSCLDKLDGMFAFCIYDKFEKSIFLARDRLGVKPLYYYFKDDKFIFASELKAFFAY
                     DNFDKSIDQTAFSHYLNSGYMPGEQSIFKFIKKLPPAHFLEFSNVKKELKITKYYDLR
                     SKFNTKKSVDLTKFENELENSIISRTISDVEFSSFLSGGLDSSVTATVLAKNGFKFKT
                     ISIGFESDKFNESDYAAAVAKNLGLEHINYTLTPKIAKDIILQLPSVYDEPFGDSSAI
                     PTLFLCQKARSLSKVALSSDGGDEINFGYARYDLNYQRYKFYKKFSFLKHIFLNLPYP
                     LLKKAFELNS"
BASE COUNT         2054 a          714 c          837 g         1598 t
ORIGIN      
        1 tctttgcttc tagcaaacaa caaattaacg actcaaaaga tcaaatacaa aacgaatggg
       61 taatgtggct ttatgaaaga gagatattta aatacttaaa ttcaataagc ttagctataa
      121 ctgaatgcgg agaaactttt gctccaggag ttacaacttt ttatatagcg cacaccatat
      181 ctttagcaga aaataatttt ttaaatccaa aaatttataa atcacaattt tataggtata
      241 tgatgaactc cgactttata gtcatttcat caaaacaaga ctatgattat atacaaaatc
      301 tctcaaaaga gatatttgga agcgaagata tgtcacacaa gctacttaag tttggaaatc
      361 cgagtctaga acaaagcata ttatcttacg gagatttcaa aaaaacagag aaaaaagtcg
      421 tattattatc gttcaacatc attacatatg aaaatccaaa ttccattatc aaacttatag
      481 acgctctttt gcaaaaagat atagaggtat attttagacc tcatcctgtt ttaaaagaac
      541 atagtatttc aatatatatt aaaaataggt atgaaaatga tagaaatttt atatttgata
      601 gtactgtaaa attctcaaat gaactaaaat caaaagttac gactataata tcagatgtga
      661 gttccatggc tcacacattt ccgcttacaa cgctaaaacc agctatcata tatatagatg
      721 atgagtctaa tttttatcaa aatattgatg aaattgtaag aaatcctatt caaattcatg
      781 ccaaaaatcc aagcgaatgt attgaattaa taaacaaaat atacaataat caagatatct
      841 ttaaaagcga tatatcgtct tttagatcca aaaatattta taacgatata gactctcaag
      901 acagtacgtc taaaaaaata gcaaatttta tagatgaaat aatcagacta aaacattaaa
      961 aaatatatct attgaacgat atactataaa tttttaattg aaattaaagt atactaatat
     1021 atggaaaaaa aattaacaca taaagtaagc ttatgaaaat tcttatcata aagcttgggt
     1081 actcagaaac atttatagac gacaattcgc gcgtggttag tttaggagac gtgctaagag
     1141 caactcctat catagaagct ctgcatcaaa aatataataa tgcaaagatc agttggctaa
     1201 ctagccaaga ggcttttacg cttataaacg gcgctaaatt tttaagtgaa acaataattt
     1261 ataatgataa atttagcggc gagtttgatg tggttataaa tttggagaaa ttcgatgaaa
     1321 tttttgagct gctaaaacgt ataaaatcta aacaaatagt tggatttatc aaagaaaata
     1381 actgcttaaa tataagtccg aaaaacgata aaattttaaa atatataaaa gaaagcggta
     1441 gctacagagt ttggcaggaa cttatatttg atatgcttgg tttaaaatgg caaaaccaaa
     1501 agtataatct tggttataaa ccaaaaaatg gtattttaca cgaagttggg cttaattatt
     1561 tagtaggtag taaatggccg acaaaagcta tgagtttaat aaaatggaat gaattagcaa
     1621 atattcttaa taagctaaat ataaattttt cctggcaaga aggaaaagaa aatttaaaag
     1681 agtatattga atggataaac tcatgcgaaa ctatcataac gcaagatagc cttggaatgc
     1741 acatagctat ggcattagac aaaagagtaa tagctctgtt tgggcctaca aactatatgg
     1801 aaatttaccc atatgggcaa acagatatca taaatgtgga ttggagctat aaaaatccga
     1861 gcatggatag tttaaatttg caagatattt taaatttaat caaaggttaa aaaatgtttt
     1921 ctatagttat aactacttat aatagatcaa agcttctaaa aagatgtcta gatagcataa
     1981 aaaatcagac ttttaaccga tacgaggttt taattttgga tgattgctct agtgatgata
     2041 caagcgagat ggttaaagaa tacacaaacg atagtaaatt tatgtatttt aaagcagagt
     2101 caaactatgg cagtagcaat ttaatattca acgaatacat agtcaagcaa aaattaaata
     2161 agtatgaata tatattgtat atgtcagatg atgatttttt agataaaaat tctctattag
     2221 aatcatataa cctcatcaat aaatacggac acatagatgt aattttatgc aaaatatcat
     2281 ttaattacgg cgatataata gtacaaagtc cggatgatgg ctctacttcc gaatactttg
     2341 agttcagtga tcaaaattcg cataaagcat tgtcaaaata tcgctttatg tatcataata
     2401 atctaaacta taaaacagac atgtatgatt ataatcaaac agcaacatat gaagtaccgt
     2461 actataaaat gtatcaaaat aaaaaaatag gttattcaaa aaatataata tatatatttg
     2521 atatatcaag tgaaaatagg gaaaaatatt tagatattaa aaactacata atggctttag
     2581 gcgaactttg ttacagagaa attaatttta taaacaataa aaaagaagct aaaaatatat
     2641 ttaaatcaaa cttattacta agaataaact gtgaaggaaa ttttctatca tcatttgatg
     2701 catttccagc aaatgttgtg gttgaatacc tttctagatt tatagatcaa gataattttt
     2761 atgatatctt ggataaattc gcaacattta tgaaagatag ctttcaaccc tcatttgacg
     2821 aaacatatca taaattaaac tcaaaattat acacatacga ggaaagaaat gacattataa
     2881 aaaactcaaa aacatttatg atatactgcc aaaacgaatg ggggaaacag ataaaagagc
     2941 agtttataaa acaaggtttg gagtgcttgg gatttataga tgacgctaat tccatgagtt
     3001 gcgctgaatt tttgaaaagc ggtttagagc cggattttgt atttatagct accggaaaac
     3061 cgaaactcat gagcgattta ataaacaatc tgcaaccata caaaggcaaa gttttaactc
     3121 tgcacgaaaa ggatgattca ctatgaaaaa aacgttttca tttggaaaaa actggcttag
     3181 atatgtaaaa tatatattaa atgaggatat tatccaaaac gcatcaaatt cactaactaa
     3241 atttatttct aatagcgaat ttaaaaataa aatttttata gatatcggat gcggaagcgg
     3301 tctgttttca ctttgcgcat taaggttggg ggcaaaaaaa gttataagtt ttgacatgga
     3361 ccttaactca gtacaagcgg caaatttatg taagcaaaaa tttgctcccg atagcacaaa
     3421 ttgggatatt ttacaaggct ccattttgga tttaaatttt ttaaaaaatt tagaattagc
     3481 attaaaaaat gaacaaatta tagtatattc atggggagtt ttacatcata ccgatgatct
     3541 aaactcggct atgttaaatg ctgcaaactt agccaaatta ggggggggta tggcatacat
     3601 agcaatttat aataaaacag aagctagtcc tttttggtta aaaataaaaa aattttataa
     3661 tagtacgaat ataattatga aattccttat ggtaagcgct tatacgatat ttttaacatt
     3721 tgaagatatc agaaaaggac gcggactaaa tatgaaagac aaaagcagag gaatgcataa
     3781 aattacagat gttatcgact ggttgggcgg atatccttat gagcccgcaa ctgctaatga
     3841 aattaatgat ttttggggta aactaggttt tgaatgcaca aaatttgctc ctacaaaata
     3901 ccgtgagccg atctatccaa aaagcttttt ttataaatat tttgtgtatc taaaacaagt
     3961 aggaaccggc tgcaatgagt ttgtatttaa gagtaaaaat gtgtagaata gcgggcggtt
     4021 ttgctacaga tctaaaagac aagatcaaac aaattgccta tgccttaaga aatggcggtg
     4081 aaaatgaagc taggttttat tttgatcaaa attttgcact ttctcataat agattagcca
     4141 taatagacct tagccataat gcagatcaac cggtgcaaaa tgagcgtttc gtactctgtt
     4201 ttaacggaga aatttacaac tacaaagaga tcgcgcgaga tcttgaatta gatgataaat
     4261 ttaaaaacag cgacacattg gttttgctag cagcatatag caaatggggt aaaagttgct
     4321 tagataaact tgatggaatg tttgcatttt gtatttatga caaatttgaa aaaagcatat
     4381 ttctagctag agacagacta ggcgtgaaac ctctttatta ctattttaaa gatgataaat
     4441 ttatatttgc aagtgagtta aaagcatttt ttgcttacga taactttgat aaaagtatag
     4501 atcaaacagc tttctcacac tatctaaact caggatatat gccaggcgaa caaagtattt
     4561 ttaaatttat aaaaaagctg ccccctgcac atttcttaga gttttccaac gtaaaaaaag
     4621 agttaaaaat cacaaaatac tacgacttgc gatctaaatt caatactaaa aaaagtgtcg
     4681 atttaactaa atttgaaaat gagctagaaa acagcatcat atcacgaaca ataagcgacg
     4741 tcgagtttag ctcattttta agcggtggtc ttgatagtag tgttacggct acggtgttgg
     4801 ctaaaaacgg atttaagttt aaaactattt caataggatt tgaatccgat aaattcaatg
     4861 agagcgatta tgctgccgca gttgcaaaaa acttaggttt ggagcacata aattacactc
     4921 ttactccaaa aatcgccaaa gatataattt tacaactacc aagcgtatat gatgagcctt
     4981 ttggagatag ttcggcgata cctactctat ttttatgcca aaaagcaagg agtttatcaa
     5041 aggttgcgct atctagcgat ggcggagatg agataaactt tggctatgca aggtatgatt
     5101 taaattatca acgatataaa ttttataaaa aattctcgtt tttaaaacat atatttttaa
     5161 atttgcccta ccctctttta aaaaaagcat ttgagttaaa ttc
//
LOCUS       DAPPKW010000109         5184 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.109, whole genome shotgun sequence.
ACCESSION   DAPPKW010000109 DAPPKW010000000
VERSION     DAPPKW010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5184)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5184)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5184
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.109"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            81..860
                     /locus_tag="RPW04_001791"
     CDS             81..860
                     /locus_tag="RPW04_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphatase"
                     /protein_id="HDX6295868.1"
                     /translation="MIIDLHNHTPLCNHASGSPIQYAQKAYSMGCKYYGFSDHNPMKF
                     DEKYRMKFEQMQLYRQIIDEVKAKFDSKMEILFGYEVDFLDGYMDERVLNAKCDYFIG
                     SVHFIGGWGFDNPEFIGEYKNKDINQIWEQYFNAIENLAKCGKFDIVGHIDLIKVFNF
                     KPTKEIKIIAKNAIKEIKKANLVVELNSAGYRKPVSELYPSDEILEMLAEFNIPITFS
                     SDAHAVDHVGANMEKTMQKAKEFGFNEAAIFINRNRKMIKI"
     gene            949..2376
                     /gene="glnA"
                     /locus_tag="RPW04_001792"
     CDS             949..2376
                     /gene="glnA"
                     /locus_tag="RPW04_001792"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HDX6295869.1"
                     /translation="MGKFVNNVKEFFEFCKENEVKFVDFRFTDLKGTWHHVSYNIKAI
                     NEDSFNGLPFDGSSIDAWQPIHKSDMMLKPDVETAFLDPFTADTTIIVICDVYDIYKG
                     ELYEKCPRSIAKKASQYLRDSGVGDVAYFGPENEFFVFDNVRIIDKPNCAMYEVDTEE
                     GEWNDGKEYTDGYNTGHRPRTKGGYFPVQPVDSMVDLRAEMVNVLEQVGLETFVVHHE
                     VAQGQGEIGVKFGTLVEAADNVQIYKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHVH
                     QSIWKDGKNLFYKDGNYANLSDIARWYIGGVLKHARSVAAFTNPSTNSYKRLIPGFEA
                     PSILTYSCQNRSASCRIPYGSGEKSVRAEFRFPDSTACPYLAFAAMLLAGLDGIKNKV
                     EPVGPMDEDLFELTLDEIRDRGIEQLPHTLRGSLEAVIRDNKYLSPAMSNLFIETYQH
                     YKFETQVWPYEQRPTPFEFKTSFSC"
     gene            complement(2439..2876)
                     /locus_tag="RPW04_001793"
     CDS             complement(2439..2876)
                     /locus_tag="RPW04_001793"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295870.1"
                     /translation="MQVTDSIITKYVGSAYKSINNDDDNSFGDTLTNLVSQSSSNDNP
                     SNSNKIDTVEKFLENLNKYGSAVTLININQQKIDEKLEQKRQELMASLDVENLSDEDK
                     AKAIASINETLEDYKKQLEKEMNEKRMAEQTDKDKLKSILSNL"
     gene            complement(3022..3540)
                     /locus_tag="RPW04_001794"
     CDS             complement(3022..3540)
                     /locus_tag="RPW04_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDX6295871.1"
                     /translation="MENINLTPEEEKRYEELCGYAFNFARNNEYSELEKMINSGLSPN
                     LKNHKGDSLIMLAAYNGSLETTKMLIQKGARVDERNDRGQTPLAGVCFKGNLEIVKLL
                     VENGADIDANNGMGLTPYSFAVMFNRGEIAEYLLTKSRKRTILKIISAKVLKLFSKKK
                     SANLNQTPSTAI"
     gene            complement(3652..5094)
                     /locus_tag="RPW04_001795"
     CDS             complement(3652..5094)
                     /locus_tag="RPW04_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDX6295872.1"
                     /translation="MAKLLNTASGNPIADNQNSLTAGVRGPVLLQDYQLLEKLAFQNR
                     ERIPERTVHANGSGAYGELEITEDISKYTKASLFQKGEKTKLFLRFSTVAGEAGAADA
                     ERDVRGFAIKFYTKEGNWDLVGNNTPTFFLRDGFKFPDFIHTQKRDPKTHLRSNSAAW
                     DFWSLNPETLHQVTILMSDRGIPASYRHMHGFGSHTYSLINAKGERFWVKFHFKTRQG
                     IKNLTNAEAGAIVAKDRESHQRDLYNSIDKGDFPKWDFKIQIMTEEEANNCKFNPFDL
                     TKIWPHAEYPLIPVGVMTLNKNPENYFNEVEQAAFSPSNIVPGISYSPDRMLQARIFS
                     YPDAQRYRIGVHYQQLDVNKPIVNVNNYYVGGSMNNGSYKQEPHAYYEPNSFGGPAEN
                     KDYLEPDLAISNAAQRFDHRVDTDYYSNAAALFAILPADEKERLYSNIAESMDGVEDF
                     IIERALGHFEKINPAYAAGVKAALSSKKSC"
BASE COUNT         1717 a          822 c          868 g         1777 t
ORIGIN      
        1 aatatacagc taaataataa atatatttaa taaaggtttt atgaacaata aaaatatatt
       61 aataacttag gagaaagaaa atgataatag acctacataa ccatacaccg ctttgtaatc
      121 acgcttcagg ctcacctata caatacgcac aaaaagctta ctcaatgggg tgtaaatact
      181 acggatttag tgaccacaat ccaatgaaat ttgatgaaaa atacagaatg aaatttgagc
      241 aaatgcaact ttatagacaa ataatagatg aagtcaaagc caaatttgat agcaaaatgg
      301 aaattttatt tggttatgaa gttgattttt tagatggcta tatggatgaa cgagttttaa
      361 atgcaaagtg tgattacttc atcggttcgg tacattttat cggcggatgg ggatttgata
      421 atccagagtt cataggcgag tacaaaaaca aagatataaa ccaaatttgg gaacaatact
      481 ttaatgctat agaaaattta gctaaatgcg gaaaatttga tatagtcggt catatagatc
      541 ttataaaagt atttaatttc aaaccaacaa aagagataaa aatcatagca aaaaatgcca
      601 taaaagagat aaaaaaagca aatttggtag ttgaattaaa cagtgcagga tatagaaaac
      661 cagtcagtga gttatatcct agtgatgaaa ttttagaaat gctagctgag tttaacatac
      721 ctataacttt ttcaagcgac gctcacgcag tcgatcatgt cggagcaaat atggaaaaaa
      781 ctatgcaaaa agcgaaagaa tttggattta atgaagctgc gatttttata aatagaaata
      841 ggaaaatgat taaaatttaa aaaagactat atttttaata taaaactaag cttaaaatta
      901 aaattttatg gtataattct taaaatttaa atttttaaag gagccgatat gggcaaattt
      961 gtaaataacg taaaagaatt ttttgagttc tgcaaggaaa atgaagtcaa atttgtggat
     1021 tttcgtttca cggacttaaa aggtacttgg catcacgtat cgtataatat aaaagcgatt
     1081 aatgaagatt cattcaacgg acttccgttt gatggtagtt ctatagacgc ttggcagccg
     1141 attcataaat cagatatgat gctaaaacca gatgtagaaa ctgcgttttt agatcctttt
     1201 actgcagata cgactattat agtaatatgt gatgtttatg acatatacaa aggtgaatta
     1261 tatgaaaaat gtcctagaag tatagcaaaa aaggcatcgc aatatctaag agatagcggt
     1321 gtaggagacg tagcttactt tggacctgaa aatgagtttt ttgtatttga caatgttcgc
     1381 attatagata aaccaaattg cgctatgtat gaagtagata cggaagaagg cgagtggaat
     1441 gatggtaaag agtatacaga tggatacaat acgggtcaca gaccacgcac caaaggtgga
     1501 tattttccag ttcaaccagt cgatagcatg gtggatctaa gagctgaaat ggtaaatgta
     1561 cttgaacaag taggacttga aacttttgtg gttcatcatg aagttgctca aggacaaggc
     1621 gaaataggcg tcaaattcgg cacacttgta gaggctgcgg ataatgttca aatttataaa
     1681 tatgtagtaa aaatggtagc tcatctaaac ggtaaaacag ctacatttat gccaaaaccg
     1741 ctttatggag ataacggaag cggtatgcac gtacatcaat ctatctggaa agacggtaaa
     1801 aatttatttt ataaagatgg aaattatgca aatcttagcg atatcgcaag gtggtatata
     1861 ggtggtgttt taaaacacgc aagaagcgtg gctgcattta caaaccctag tacaaatagt
     1921 tataaaagat taattccggg ttttgaagct cctagcattt taacttattc ttgccaaaac
     1981 agaagcgcta gttgtcgtat tccttatggt tcaggagaga aaagcgttag agcggagttt
     2041 agatttccag atagcacggc ttgcccatat ttagcgtttg ccgctatgct tctagcaggg
     2101 cttgatggta taaaaaataa agtggaacct gtcggtccta tggatgaaga tttgtttgag
     2161 ctaactcttg atgagataag agatcgaggt atagagcaac ttcctcacac tttaagaggc
     2221 agccttgaag cagttatccg tgataataaa tatctaagtc ccgcaatgag caatttattt
     2281 atagaaacat atcaacatta taaatttgaa actcaagtat ggccttatga gcaaagacct
     2341 actccgtttg agtttaaaac ttcattttct tgttagttta tgtaaattta gttttggggc
     2401 aaaaacccta aaactaaata aatatcaata taaaaatatt ataaatttga aagtatggat
     2461 ttaagcttat ccttgtcggt ttgttctgcc atacgttttt cattcatctc tttttcaagc
     2521 tgttttttat aatcctcaag agtctcattt atacttgcta tagctttagc tttgtcttca
     2581 tcgcttaagt tctcaacatc caaactagcc ataagttctt gtcttttttg ctctaatttc
     2641 tcatcaattt tttgttgatt tatatttatt agagttacgg cagaaccgta tttattcaaa
     2701 ttttctaaga atttttcaac ggtgtctatc ttattgctat ttgaaggatt gtcattacta
     2761 gacgattgac taactagatt agtcaaagta tctccaaaac tattatcatc atcattgttg
     2821 atacttttat aggctgagcc gacatatttt gtgataatac tatcagttac ttgcatttta
     2881 actccttttt tagttgaaaa ttataagcaa aatatattcc aaaaattacg aatataaaaa
     2941 ttttgataga attaaaagct atacaattaa atttaaaata ttataaaaat agagtaaaaa
     3001 aagggttata aaaccctttt tttatatcgc agtactagga gtttgattta aatttgcaga
     3061 ttttttcttt gaaaatagtt ttaagacttt agcgcttatt atcttcaaaa tagttctttt
     3121 tctactttta gtaagtaaat actcggctat ttcgcctcta ttaaacataa ctgcaaaact
     3181 gtacggagta agtcccatgc cgttatttgc atctatatcc gcaccatttt caactagaag
     3241 ttttactatt tctaaatttc ccttgaaaca tactccagca agcggagttt gacctctatc
     3301 atttctttca tctactctag cgcctttttg aataagcatt ttagtagttt ccaatgaacc
     3361 attataagct gctagcataa tcaaactatc gcctttatga ttttttaaat ttggactaag
     3421 tcctgaattt atcatctttt caagttcgct atattcatta tttctagcaa aattaaaagc
     3481 atatccgcaa agttcttcat atcttttttc ttcttctggc gttaagttta tattttccat
     3541 attatttcct ttttttcaaa tttgaaaaac ttccaaaaaa gacttttaaa tttgaaaagc
     3601 tgcttaaaaa taagcagctt aagaattatt taattatttt atttagtcgt attaacaact
     3661 tttcttagaa gaaagtgccg cttttactcc tgctgcgtaa gccggattaa ttttttcaaa
     3721 gtgaccaagc gctctttcta tgatgaaatc ctcgactcca tccatactct cagcgatatt
     3781 tgaataaagt ctctcttttt catcagccgg aagtatcgca aataaagctg ctgcattact
     3841 ataataatct gtatctactc tatgatcaaa tctttgagct gcatttgata tagcaagatc
     3901 aggctcaaga taatctttgt tttcagcagg accgccaaaa ctatttggct cataataagc
     3961 gtgcggctct tgtttatagc taccgttatt catagatcca cctacataat aattatttac
     4021 gtttactatc ggtttattta cgtctagttg ttgataatgt acgcctattc tatatctttg
     4081 agcatctgga tagctgaaaa ttctagcttg aagcatacga tctgggctgt agctaatgcc
     4141 aggaactatg ttacttgggc taaatgcggc ttgctctact tcgttgaaat aattttcagg
     4201 atttttattt aaagtcatta cgccaaccgg gattagcgga tactctgcat gaggccaaat
     4261 ttttgttaaa tcgaatggat taaatttaca gttattagct tcttcttcag tcataatttg
     4321 tattttgaaa tcccattttg gaaaatcacc tttatcgata ctattatata gatctctttg
     4381 atggctctct ctgtcttttg ccactatagc accagcttct gcgtttgtaa gatttttaat
     4441 tccttgtctt gttttaaagt ggaatttaac ccaaaatctt tcaccttttg catttataag
     4501 gctataagta tggcttccaa aaccatgcat atggcggtag cttgcaggaa ttccgcgatc
     4561 gctcataagt atagttactt gatgaagtgt ttcaggattt aatgaccaaa aatcccaggc
     4621 tgcgctattt gatcttaaat gagtttttgg atctcttttt tgagtatgga taaaatctgg
     4681 aaatttaaaa ccgtctctta aaaagaatgt aggagtatta ttacccacta aatcccagtt
     4741 accctctttt gtataaaatt tgatagcaaa accacgaacg tctctctcag catcagcagc
     4801 accggcttcg cctgcaactg ttgaaaatct taaaaatagt tttgtttttt cacctttttg
     4861 gaaaagtgaa gctttagtat atttgctgat atcttcagtg atttctaact ctccataagc
     4921 tccgctaccg tttgcatgta ctgttctttc agggattctc tctctgtttt gaaatgcaag
     4981 tttttcaagt aattgataat cttgtaataa aacaggacct cttacgcccg ctgttaaact
     5041 attttgatta tcagcgattg gattgccgct agctgtgttt aataactttg ccatatttat
     5101 tcctttataa taaattttat tgtttgagaa ttatatctat taaatgataa taaattttaa
     5161 atagaaataa tttttattga ttac
//
LOCUS       DAPPKW010000110         5116 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.110, whole genome shotgun sequence.
ACCESSION   DAPPKW010000110 DAPPKW010000000
VERSION     DAPPKW010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5116)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5116)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5116
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.110"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            57..524
                     /locus_tag="RPW04_001796"
     CDS             57..524
                     /locus_tag="RPW04_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HDX6295873.1"
                     /translation="MVLRKIVLILCFFTIGLNAEQVEVTADNFFADEKSLTSDLKGNV
                     VIKKGSYDTLTSNSVKIYFDIKRQPIKYVATGNAKFKAILNKKNYNGSGNILIYEPLK
                     KTYTLSGDAYLHEEQIDKKVYGDEIVVNQGDGTYKVSSKDKKPVKLIFQVEDK"
     gene            528..1124
                     /locus_tag="RPW04_001797"
     CDS             528..1124
                     /locus_tag="RPW04_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDX6295874.1"
                     /translation="MIRIVSAKFLTSSVNSLDAPDFGISEVAFLGRSNVGKSSIINAL
                     TNHQGLAKSSSTPGKTQLINFFEVIFDNDGQKIPIIFVDLPGFGYAKVSKSLYSAWQK
                     NLDEFLKNRINIKTFVHLVDSRHANLEKDENLGVYLNEFIRNDQKILNLYTKCDKLNQ
                     SERSKVLKMDSSAILVSSTKKTGIDKASETIYNSVFGL"
     gene            1131..1589
                     /locus_tag="RPW04_001798"
     CDS             1131..1589
                     /locus_tag="RPW04_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016647134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDX6295875.1"
                     /translation="MITYKKAKLKNIPLMQSIVKKEIENGIILSRNDDEIATNIRSYT
                     LAYKDDELVGYSALHIHASNLAEVRSLVIKENLRGQGIGGGLVKELLKEANDLEIEQV
                     FTLTYQKSFFEKLGFNEISKEKLPAQKIWADCIKCKHFPVCNEIALIYYL"
     gene            1556..2044
                     /locus_tag="RPW04_001799"
     CDS             1556..2044
                     /locus_tag="RPW04_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012140076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295876.1"
                     /translation="MQRNSVNLLSLRFIVFCAMLIAYEILSSTSHIVPPFIGLFFAYI
                     VILKNESERNMNNFDKRWYLAILFLIFAEQIHGFELFSTILNFLIFYYFIHDWLKVNM
                     KWRQCLLIIFIFSGYIGTLLMSNLILYILNQPRLWISYEYLIYIVVESVIAILLFKER
                     VL"
     gene            2041..3849
                     /gene="mrdA"
                     /locus_tag="RPW04_001800"
     CDS             2041..3849
                     /gene="mrdA"
                     /locus_tag="RPW04_001800"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDX6295877.1"
                     /translation="MRMRIVYAILILVWTILLVRIYYLSIKSNEYYEEIAEKNAIKTE
                     LIAPVRGQVFDIKGKPLAVNRLGFSVLVKPHLRKNEKVLDEELKILTHTFTDLNVTKL
                     KKEYLKNDSPYNQDFVEVIEFVDYDSMIPHFAKLSLRENIMIKPASKRHYPFNNLASH
                     VIGYVGRAKQKDVETDELTKLTNYTGRSGVERYYNQILQGSRGERKTKVTALNQEVEE
                     VSYSPATSKDITLTLESELQQYVTEAFNKDSGAVVVMSLKDGAILAAGSFPEYDLNPF
                     VTGITQKEWDAIINNLDHPFTNKLVNSLYPPGSVVKMAMGMAFFDSGKIDPTTKIMCD
                     PYFELGGRKFRNWKNYGYVNMTIVEALKESCDTYFYRGSYKVGIDIIAPVLEKYGFGV
                     RSGIDLPNEYIGIVPNKDWKRTKSKEPWYQGDTLNTSIGQGSFLATPVQVARDTAIFA
                     SGVDMTPHFLHSIDGEIVEWKTKDILTPQEKSYLKYIRRGMYEVANVQGGTGFRALSA
                     SKIFLGAKTGTAQVVGISQSEKTRMKESEMKRYERSHAWITTYGPYEDPQFVVTVLVE
                     HGSSGGSAGGPIVAKIYNKLLDMGYIDQKYIKKEIK"
     gene            complement(3851..4114)
                     /locus_tag="RPW04_001801"
     CDS             complement(3851..4114)
                     /locus_tag="RPW04_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FlhB-like flagellar biosynthesis protein"
                     /protein_id="HDX6295878.1"
                     /translation="MAKIKKAVALGYNKKRDNAPKVLASGKGEMASKIIEEAQKHKIP
                     IKEDSDLVEILSKIDINQEIPPNLYKAVAEVFSFLYRATKTKN"
     gene            complement(4116..>5116)
                     /locus_tag="RPW04_001802"
     CDS             complement(4116..>5116)
                     /locus_tag="RPW04_001802"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295879.1"
                     /translation="NLKDIKEIKNEFIKTINNIKTEIENIKSSLKKDHDIALNRDLKQ
                     IAAQKLDATTKQAVQAVQKEAAPNTQINLSNLINSLSSETSQNQVSNINLSIMTKEIS
                     TDANSLNLQEKLNLAAKKLSNIINFFDKNSVDAKNNVTEIKHLLKAALRAGNDIDKII
                     PFDENTSFKNLQNDIKGALLNIKEATANQQSLNNINQNVNRLITQIEMHQLISFAQNS
                     VQTYLPYTWDGLESSTVAFKHGKKNKFYAKIDLNFIKFGSISVVLGLFDTKYIDISIL
                     TGTDEFKNIILSSSKELKSAITNLGLIVSSFTLANKSKFEPYNEEKAFDLGFNVKA"
BASE COUNT         1708 a          678 c          955 g         1775 t
ORIGIN      
        1 caaagcgtaa tttacgatat gatggataat acgatatatg cacaaaaggt aaagggatgg
       61 ttttacgaaa aatagtttta attttatgtt tttttactat tggtttaaat gccgagcaag
      121 tagaagtaac tgccgataat ttttttgccg atgagaagtc actaaccagt gatctaaaag
      181 gcaatgttgt tataaaaaaa ggaagttatg atactttaac ttctaatagc gtaaagatat
      241 attttgatat taaaagacag cctattaagt atgttgctac cggaaatgct aaatttaaag
      301 ctattttaaa taaaaaaaat tataacggca gcggaaatat acttatatac gagccgttaa
      361 aaaaaactta tacattgagc ggagatgcat atttacatga agagcagatc gataaaaaag
      421 tatatggcga tgagatcgtt gtaaatcaag gcgatggaac atataaagta agtagcaaag
      481 ataaaaagcc ggtaaaattg atatttcaag tagaggataa ataaaacgtg ataaggatag
      541 taagcgctaa gtttcttacg tcatctgtaa attctttgga cgctcctgat tttggtatca
      601 gcgaagtcgc atttttaggg cgtagcaatg ttggtaagag ttctataata aatgcactta
      661 caaatcatca aggtttggca aagtccagtt ctactccggg aaaaactcag ctgataaact
      721 tttttgaagt aatttttgat aatgatggac aaaaaatacc tattatattt gtagatttac
      781 cggggtttgg ttatgctaaa gtaagcaaaa gtctttatag cgcatggcag aaaaatttag
      841 atgagttttt aaaaaataga attaatataa aaacttttgt tcatttagtt gactctagac
      901 atgcaaattt agaaaaagat gagaatttag gtgtttatct taatgaattt ataagaaatg
      961 atcaaaagat tttaaattta tacacaaaat gcgataagct aaatcagagc gaaagatcaa
     1021 aagtattaaa gatggatagt tctgctattt tggtatctag tacaaaaaaa accggtatag
     1081 acaaagccag tgaaactata tataatagtg tttttggact gtaggtttca atgataacat
     1141 ataaaaaagc aaaattaaaa aacatacctc ttatgcaatc catagtgaaa aaagagatag
     1201 aaaacggaat aattttatct agaaatgatg atgaaatagc tactaatatc cgttcatata
     1261 cgcttgctta taaagatgat gagttagtcg gttatagtgc gcttcacatt catgcttcaa
     1321 atttagctga agtaagaagc cttgttataa aagagaattt aagaggtcaa ggtataggag
     1381 gcgggcttgt aaaagagctc ttaaaagaag ctaatgactt agaaattgag caggttttta
     1441 cattgactta tcaaaaaagt ttttttgaaa aattaggttt taatgagata tcaaaagaga
     1501 agcttccggc tcaaaaaatt tgggccgatt gtatcaaatg caaacatttt ccagtatgca
     1561 acgaaatagc gttaatttac tatctttaag atttattgta ttttgtgcta tgcttatagc
     1621 ttatgaaata ctaagttcta ctagccacat agtgccgcct tttatcgggt tattttttgc
     1681 ctatatagtt atactcaaaa atgagagcga aagaaatatg aataactttg ataagagatg
     1741 gtatctggct attttatttc ttatttttgc tgagcagata catggatttg agctattttc
     1801 tacaatttta aattttttga tattttacta ttttatacat gattggctaa aagtaaatat
     1861 gaaatggaga caatgtctgc ttattatatt tatttttagt ggatatatag gaactctttt
     1921 gatgagcaat ttaatcttat atattttaaa tcaaccgcga ctttggataa gttatgaata
     1981 tcttatttat atagttgttg aatctgttat agctatactt ctttttaagg aaagagtatt
     2041 atgagaatgc gtattgttta tgctatcttg attttagtat ggactatttt gcttgttaga
     2101 atatattatt taagtataaa atcaaatgaa tattatgaag aaatagctga aaaaaacgct
     2161 attaaaactg agcttatagc tcctgttaga gggcaagtct ttgatataaa aggaaaaccg
     2221 ttagccgtaa ataggcttgg tttttcagtg ttagtaaagc ctcacttaag aaaaaatgag
     2281 aaagttttag atgaagagct aaaaatttta actcatactt ttacggattt aaatgttaca
     2341 aaattaaaaa aagagtattt aaaaaacgac tctccatata atcaagactt tgtagaagtc
     2401 attgaatttg tagattatga tagtatgatt cctcattttg cgaagctgag tttaagagaa
     2461 aatatcatga ttaaaccagc tagtaagcgt cattatccgt ttaataattt agcaagccat
     2521 gttataggat atgtcggcag agcaaaacaa aaagatgtag aaaccgatga gctgactaag
     2581 cttacaaatt ataccggaag aagcggtgtt gagagatatt ataatcaaat tttacaaggc
     2641 agcagggggg agagaaaaac caaagttacc gcgctcaatc aagaagttga agaggtatca
     2701 tattcgccag ctactagtaa agatataact cttactttag aatcagagtt gcagcagtat
     2761 gttactgaag catttaataa agactccgga gcagtggtag tgatgagcct taaagatggt
     2821 gctattttag ctgcaggaag tttcccggag tatgatttaa atccatttgt aacggggata
     2881 actcaaaaag agtgggatgc cattataaat aatttagatc atccgtttac caacaaatta
     2941 gtaaattctc tatatcctcc aggaagcgtt gtcaaaatgg ctatgggaat ggcgtttttt
     3001 gatagcggga agatagatcc tactacaaag ataatgtgtg atccgtattt tgaacttggt
     3061 ggcaggaaat ttcgtaactg gaaaaattac ggttatgtaa atatgactat agtcgaagct
     3121 ttaaaagaga gttgcgatac atatttttat agaggttcgt ataaagtagg catcgatatt
     3181 atcgctcctg ttttggagaa atacggattt ggcgttagaa gcggaattga tcttccaaat
     3241 gagtatatag gtatagttcc aaataaagat tggaaaagaa caaaatcaaa agagccttgg
     3301 tatcaaggag atacgttaaa cacgtctatt ggtcaaggaa gctttttggc tactcctgtg
     3361 caagtagcaa gagatactgc tatctttgct tctggtgttg atatgacgcc acactttttg
     3421 catagcatag atggtgagat cgtagagtgg aaaactaaag atatcttaac cccgcaagaa
     3481 aaatcatatc taaaatatat taggcgcggt atgtatgagg ttgcaaatgt tcagggcgga
     3541 actggtttta gagctttaag tgcgtctaaa atatttcttg gagcaaaaac aggaacggcg
     3601 caagtagtag gaatatctca aagcgagaaa actagaatga aagagtctga gatgaaacgc
     3661 tatgagagat ctcacgcgtg gattactact tatgggccat atgaagatcc gcagtttgta
     3721 gttactgttt tggtagagca cggtagtagc ggaggaagtg ccgggggacc tattgtcgct
     3781 aaaatttata ataagttgct agatatgggt tatatagatc aaaaatacat aaagaaagag
     3841 ataaaatagt ttagtttttt gtctttgttg ctctatataa aaagctaaat acttcagcta
     3901 ccgctttgta taaattcggt ggaatttctt ggtttatatc tattttgctg agtatctcta
     3961 caaggtccga atcctctttt ataggtattt tatgtttttg agcttcttct atgattttgc
     4021 tagccatctc accttttcca gatgctagta cttttggagc gttgtctctt tttttattat
     4081 atcctaaagc cacagctttt ttaattttcg ccattttaag ccttcacatt gaatccaaga
     4141 tcgaatgctt tttcttcatt gtatggttca aatttagatt tgttagcaag cgtaaaacta
     4201 cttactatga gtcctaaatt tgttatggct gatttaagct ctttactgga gcttaaaatt
     4261 atatttttaa actcatctgt accggttaat atcgaaatat ctatatattt cgtatcaaat
     4321 agtcccaaaa ctaccgaaat agatccaaat ttaataaaat taagatctat ttttgcatag
     4381 aatttattct ttttaccatg cttaaaagca accgtgctgc tttctaatcc atcccaagta
     4441 tacggcaaat acgtctgcac cgaattttga gcaaagctta ttaattgatg catttcaatt
     4501 tgagttatta agcgatttac gttttgattt atattgttta agctttgctg attagcggtt
     4561 gcttctttta tgtttagtaa tgctcctttt atatcgtttt gcagattttt aaaactcgtg
     4621 ttttcatcaa aaggaatgat tttatctatg tcgtttccag ctcttaaagc ggcttttaag
     4681 agatgtttta tttcagttac gttatttttt gcatcgacgc tatttttatc aaaaaagttt
     4741 attatgtttg atagtttttt agcggctaga ttaagctttt cttgtaaatt tagactatta
     4801 gcatcagtgc ttatctcttt tgtcattatg gataaattta tgtttgatac ttgattttgt
     4861 gatgtttcgc tgcttaatga gtttattaaa tttgaaaggt ttatttgagt attcggtgct
     4921 gcttcttttt gtactgcttg aacagcttgt ttcgttgttg catcaagctt ttgcgcagct
     4981 atttgtttta gatctctatt tagtgctata tcatgatctt tttttaagct actttttata
     5041 ttttctattt ccgtttttat gttgtttata gtttttataa actcgttttt tatctcttta
     5101 atatctttta aattcg
//
LOCUS       DAPPKW010000111         5002 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.111, whole genome shotgun sequence.
ACCESSION   DAPPKW010000111 DAPPKW010000000
VERSION     DAPPKW010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 5002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5002
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.111"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..127
                     /locus_tag="RPW04_001803"
     CDS             <1..127
                     /locus_tag="RPW04_001803"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HDX6295880.1"
                     /translation="VKELLENKINTKNCPPNCRPNAINEFLNEILNPDVKHINFI"
     gene            158..1252
                     /locus_tag="RPW04_001804"
     CDS             158..1252
                     /locus_tag="RPW04_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002956896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HDX6295881.1"
                     /translation="MKDKFRIDSHKLIFHPKRVSNFLDAFGNWEKEKEIYPIYVEFSP
                     CGACNHRCTFCGLDYMGYKNIKISLDVFKKTSKDMAKCGVKSIMFAGEGEPLLHKDLP
                     LMAEFAKMQGIDLGLTTNFALTNTDISKSLLKNFTWIKVSLNGANAQNYAMIHKTKAS
                     DFDKVINNLKEAVKIRKENKFKCSIGVQLLLLKENIDYVLDLAKILRDINVDYFVIKP
                     YSQHLFSITKEHNAFQYINLESLANSLDELQNDNFSIIFRYKTMQKKDSNKHEYKKCY
                     STPYFWAYVSSNGDLYSCSCYLGDDKFKFGNINDKSFRELWQSDKRKQNIDFVQNSLN
                     ISQCRVNCRMDFINSYLWELKNPNEHVNFI"
     gene            1261..2022
                     /locus_tag="RPW04_001805"
     CDS             1261..2022
                     /locus_tag="RPW04_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006656793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDX6295882.1"
                     /translation="MTQAEIRKNILKMANRAKSPHIGSALSCVDILYTLYFKILKLEN
                     YEQRDIFLLSKAHAAMALYATLNAKGFMSNEEILGYYQNNGTLPAHTDRFSSPYVEIS
                     AGSLGHALPMSVGMAMSIKNENRKVYVLIGDGETQEGSIWEAAMLAPKLNLNNLCVLI
                     DYNNLQGYGRAREITSFEPIDKKWESFGWECVIVDGHDVQALQKAMSIKTDKPLCIVC
                     KTIKGKGVEFMENELKWHYYIVTDEILNSALKVLK"
     gene            2019..2885
                     /locus_tag="RPW04_001806"
     CDS             2019..2885
                     /locus_tag="RPW04_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDX6295883.1"
                     /translation="MRNTLANEIYKYATKNKDFFLISGDAGLGVWDEYQKELPNQFIN
                     PGINEALCVGMAAGMALSGKKVVYYNIAPFVIMRPFEQVRNDICYQELPVILVGTGAG
                     ITYAPSGMTHYSVEDIALALSLPNLDIYSPASPLEAKLAFENALKSKNPSYIRIEKSG
                     EVEIHKNNIDITDLNFIQIGGEDLIIAHGSIVNECLGISNVSVATAPFINSANKNIID
                     QISKFRNIFVVEEHFKFGGLATFLKSKTDKKIHSIGLKNHYIHDIGDRKFLRKLYGLD
                     KSAIEKQIKENI"
     gene            2882..3541
                     /locus_tag="RPW04_001807"
     CDS             2882..3541
                     /locus_tag="RPW04_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDX6295884.1"
                     /translation="MKELDIFTNLHKKTSREYLPRMCDDKVNCMIKAKEFEADFWDGD
                     RKFGYGGYKYDGRWEAVAKKLIEIYGLKDSDKVLDVGCGKAFLLYELKKLLPNLQITG
                     FDISKYALKNAKEEVKDCLFYHDAKDDFPFKQEEFDLAISLTTLHNLKIYDLKNALQN
                     INLVAKNKFIVVESYRNEKELFNLECWALTCQSFFSKDEWEWLFKEFGYNGDYEFIYF
                     E"
     gene            3595..4656
                     /locus_tag="RPW04_001808"
     CDS             3595..4656
                     /locus_tag="RPW04_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HDX6295885.1"
                     /translation="MGLLYTKYKMFHYPKKIDSLNTDEILPPLQVRIKPTNACNHDCW
                     YCAYKASNLQLGKDMIVKDYIPKDKMFEIIDDLDSMGVKSITFSGGGEPLSYRYMTET
                     LEKLSKTNIKFASLTNGSKLNGDIANLFSKFGTWLRVSIDGFDDESYAKYRNVKVGEF
                     SKVIKNMSEFSKLGGKCLLGVSFIIDDKNYSHIYDVLHLFKDIGVRSVKLSPCIVSND
                     AAKNNEYHSKIFDNVQKEIYKSMNLTDGNFEIYNSYHLLDTKFKKDYDWCPMLQILMV
                     IGADQNVYACQDKAYNLDSGLLFSIKNRSFKEAWSADKSSFYKIKPCEVCNHHCVSNE
                     KNKILLEYLGADKEHLGFV"
     gene            4656..>5002
                     /locus_tag="RPW04_001809"
     CDS             4656..>5002
                     /locus_tag="RPW04_001809"
                     /inference="COORDINATES: protein motif:HMM:NF012334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HDX6295886.1"
                     /translation="MKTAIVTGASRGIGRAIANELLNRGYYVISIARNFDNDTKTMQN
                     QKCISLDLMKNSAIDELKAQIKDYDINTIIHNLGGKINEDNQPLTSQALKNSIHFNLG
                     IAVDINSLLIPKI"
BASE COUNT         1971 a          671 c          920 g         1440 t
ORIGIN      
        1 cgtaaaagag ttgttagaaa ataagataaa cacaaaaaat tgcccgccaa actgtaggcc
       61 aaatgctatt aatgagtttt taaatgagat tttaaatccc gatgtaaaac acataaattt
      121 catatagctc tatagcctag cgggctatgg agatattatg aaagataaat ttagaattga
      181 ttcacataaa ctaatttttc atcccaaaag agtatctaat ttcttagatg catttggaaa
      241 ctgggaaaaa gaaaaagaga tatacccgat ctatgttgag tttagtccat gcggggcatg
      301 caatcacaga tgcacatttt gcggtttgga ctatatggga tataaaaata taaaaatcag
      361 tctagatgtg tttaaaaaaa catctaaaga tatggcaaaa tgcggtgtaa aaagcataat
      421 gttcgcagga gaaggtgagc cactacttca taaagatctg ccattaatgg cagagtttgc
      481 aaaaatgcaa ggaatagatc ttggacttac tacaaatttt gcactaacaa acactgatat
      541 ttccaagtct ttgcttaaaa attttacttg gataaaagtt agtctaaatg gtgcaaatgc
      601 gcaaaactat gctatgatcc acaaaactaa ggcaagcgat tttgacaaag taataaataa
      661 tctaaaagaa gccgtaaaaa taagaaaaga aaataaattt aaatgctcaa tcggagttca
      721 actactgctg ctaaaagaaa atatagacta tgttttagac ttggctaaaa tattaagaga
      781 tataaatgtt gattattttg tcattaagcc gtattcacaa catcttttta gcataacaaa
      841 agagcataat gcatttcaat acataaattt agagtcgcta gcaaatagtt tagatgagtt
      901 gcaaaatgat aatttttcaa ttatttttcg atataaaact atgcaaaaaa aagattctaa
      961 caaacatgag tataaaaaat gttactcaac accatacttt tgggcatatg tgtcaagtaa
     1021 tggggatttg tactcttgca gttgctactt aggagatgat aagtttaaat ttggtaacat
     1081 aaatgataaa agtttccgtg aactttggca gagcgataaa agaaagcaaa atatagattt
     1141 tgttcaaaac tctcttaaca tcagtcaatg cagagttaat tgcagaatgg attttatcaa
     1201 ctcatacctt tgggaactta aaaatccaaa tgaacatgta aattttattt aggaactatt
     1261 atgactcaag cagagataag aaaaaatata cttaaaatgg caaatagagc caaaagtccg
     1321 catataggct cggctctatc ttgcgttgat attttatata cgttgtattt taaaatttta
     1381 aaacttgaaa actatgaaca aagagatatt ttcttactct caaaagcgca cgcggcaatg
     1441 gctctttacg ctactttaaa cgcaaaagga tttatgagca atgaagaaat actaggatat
     1501 tatcaaaata acggtacatt acctgcacac acagatagat ttagtagccc gtatgtggag
     1561 atctcggcag gaagccttgg gcatgcactt cctatgtcag taggaatggc aatgagcata
     1621 aaaaatgaaa atcgaaaagt atatgtttta atcggagatg gagaaacgca agaaggtagc
     1681 atttgggaag cagcgatgct agctcctaaa ctaaatttaa ataatctttg tgttttgata
     1741 gattataaca atcttcaagg atatggtaga gctagggaaa taacaagttt tgagcccata
     1801 gataaaaaat gggagagttt tggctgggaa tgcgtcatag tagatggcca tgatgtacaa
     1861 gctttgcaaa aggccatgag cataaaaaca gataagccgc tttgcatagt atgcaaaact
     1921 atcaaaggaa aaggcgtaga gtttatggaa aatgaactaa aatggcatta ttacattgtt
     1981 acggatgaga ttttaaacag cgcattaaag gtgctaaaat gagaaataca ttagcaaatg
     2041 aaatttataa atacgccacc aaaaataaag atttttttct aataagcgga gatgctgggc
     2101 ttggcgtatg ggatgaatat caaaaagagc ttcctaatca atttataaat cccgggataa
     2161 atgaagcatt atgcgtagga atggctgctg gaatggcact aagcgggaaa aaagtagtat
     2221 attataatat agctccattt gtgataatgc gtcctttcga gcaagtaaga aacgatattt
     2281 gttatcaaga attgcccgtg attttagtag gtactggagc cgggataaca tacgctccat
     2341 ctggtatgac gcactatagc gttgaggata tagctcttgc attatcttta ccgaatttag
     2401 atatatactc gccagctagt cctcttgagg caaaattagc atttgaaaat gctctaaaat
     2461 caaaaaatcc aagctatata agaatagaaa aatcgggcga ggtagaaata cataaaaata
     2521 atatagatat aacagattta aattttattc aaatcggcgg agaagatctg ataatagcgc
     2581 acggaagcat agtaaatgaa tgcttgggta tctctaatgt aagcgttgca accgcacctt
     2641 ttataaactc tgcaaataag aatattatag atcaaatatc taaatttaga aatatttttg
     2701 tagtcgaaga gcattttaaa tttggaggtc tagctacatt tttgaaaagc aaaacagata
     2761 aaaaaattca ttcaatagga ctgaaaaacc attatattca tgacatagga gatagaaaat
     2821 tcttaagaaa attatatggt ttggacaaaa gcgctataga aaagcaaata aaggagaata
     2881 tatgaaagaa cttgatattt tcacaaattt acataaaaaa accagtagag aatatcttcc
     2941 tagaatgtgc gatgataaag taaattgtat gataaaagct aaagaatttg aagctgattt
     3001 ttgggatgga gatagaaaat ttggctatgg aggctacaaa tacgatggta ggtgggaagc
     3061 agtagctaaa aaattaatag aaatttacgg attaaaagat tcagataaag tgcttgatgt
     3121 tggatgcgga aaagcatttt tattatatga gttaaaaaag ctgcttccaa atttacaaat
     3181 taccggattt gatatatcaa aatacgcatt aaaaaatgca aaagaagagg taaaagactg
     3241 tttattttac catgatgcaa aagatgattt tccttttaaa caagaagaat ttgatcttgc
     3301 tatttcgttg acaactttgc ataatcttaa aatttacgat cttaaaaatg cgctacaaaa
     3361 cataaattta gtcgcaaaaa ataaatttat agtagtagaa agttaccgaa atgaaaaaga
     3421 actttttaat cttgaatgct gggcgctaac ttgtcaaagc ttttttagca aagacgagtg
     3481 ggaatggcta tttaaagaat tcggctataa tggcgattat gaatttatat attttgagta
     3541 ggaatttaat aataaaatta tgaaaaatca tagcagccta aagagagtaa attaatgggt
     3601 ttattatata caaaatacaa aatgttccac tatccaaaaa agattgactc tttgaatacg
     3661 gatgagatat tgcctcctct tcaagtaaga atcaaaccta ccaatgcttg caatcatgat
     3721 tgttggtact gtgcatataa agctagcaat cttcaactcg gaaaagatat gatagttaaa
     3781 gactatatac caaaagataa gatgtttgaa ataatagatg atcttgatag tatgggtgta
     3841 aaaagtataa cttttagcgg aggtggagag cctctatctt atagatatat gactgaaact
     3901 ttagaaaaat taagcaaaac aaatatcaaa tttgcaagcc taacaaacgg ttcaaaacta
     3961 aatggagata tagcaaatct attttctaaa ttcggaactt ggttgagagt aagcatagac
     4021 ggatttgatg atgagagcta tgcaaaatat agaaatgtaa aagtcggaga gtttagtaaa
     4081 gtaattaaaa atatgagcga gtttagtaag ttagggggga aatgtttatt aggagtgtct
     4141 ttcataatag acgacaaaaa ctactctcat atatatgatg ttttacactt atttaaagat
     4201 ataggcgtaa gaagcgtgaa attaagtcct tgcatagtat caaatgatgc tgctaaaaat
     4261 aatgaatatc atagtaaaat atttgataat gttcaaaaag agatatataa gtctatgaat
     4321 ttaaccgacg gcaactttga aatttacaat tcataccacc ttttagatac taaatttaaa
     4381 aaagattacg actggtgccc aatgctgcaa attcttatgg ttataggagc agatcaaaac
     4441 gtatatgcat gccaagataa ggcttataat cttgatagcg gactattatt tagcataaaa
     4501 aatagaagct ttaaagaggc atggagtgca gacaaaagta gtttttacaa aatcaaaccg
     4561 tgtgaagtat gcaatcatca ctgcgtatca aatgaaaaaa acaagatctt gcttgagtat
     4621 ttaggcgcgg acaaagaaca tctaggattt gtataatgaa aacagcaata gttacaggag
     4681 ccagcagggg cataggaaga gctatagcaa atgaactttt aaatagaggt tattatgtta
     4741 tatcgatagc tagaaatttt gacaatgata caaaaacaat gcaaaatcaa aaatgcataa
     4801 gcttagatct tatgaaaaat agtgcaatag atgagctaaa agcacagata aaagactatg
     4861 atataaatac cataattcat aatcttggcg gaaaaattaa cgaagataat caacccctaa
     4921 ctagtcaggc actaaaaaac agcattcatt ttaatttagg aatagcagta gatataaata
     4981 gccttttaat acctaaaata ca
//
LOCUS       DAPPKW010000112         4936 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.112, whole genome shotgun sequence.
ACCESSION   DAPPKW010000112 DAPPKW010000000
VERSION     DAPPKW010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4936
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.112"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..930
                     /locus_tag="RPW04_001810"
     CDS             <1..930
                     /locus_tag="RPW04_001810"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDX6295887.1"
                     /translation="GHITHKPLEQSCHDHASDHHRAHSHSHSSANTNKKVLKISLFIT
                     VAAMIFQFVYALITNSLALMSDTLHMLSHVIALGLSWFAIWAASSFSSEQKTFGYHRL
                     ETIAAFINSILIAVFGLFIVYEAIVKLINPEPIEIGTMLIVAAIGLGVNITTGLIMLK
                     GDMGNLNIKSSFAHMMSDLLSSVAIILGGIIVYFTNLWWIDSALALFIAIIIAKWSFS
                     LARDSMNILLEASPIDINAAKNVMLENPLVLDVHDLHISEITHKMYVLTAHIVLNKDN
                     IFKFDEIINDLSLSLKNRLEIGHITIQPEWRES"
     gene            1052..1681
                     /locus_tag="RPW04_001811"
     CDS             1052..1681
                     /locus_tag="RPW04_001811"
                     /inference="COORDINATES: protein motif:HMM:NF019843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HDX6295888.1"
                     /translation="MKKLVLVYILSTVLAFCKDYENGLKAYEKGDYKSAVISFQKACD
                     KGNMNSCYTLGNLYVLNQGVKQDYKKAVKLFQKACDGGEAKACGYLGVMYENGNAVEQ
                     NRQIAAKLYEKACEMGHYISCSELGIMYANGNFISKDYYKAMELFKKACEMGEANGCN
                     YLALMYFIYSEKSGIEQDAIKAKDYFCHACEMGFEDACESCNMLSQKQD"
     gene            complement(1691..2641)
                     /locus_tag="RPW04_001812"
     CDS             complement(1691..2641)
                     /locus_tag="RPW04_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004276082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6295889.1"
                     /translation="MLKISHLSKKFGNNTVLKDINLSLNSGEILTILGGSGCGKSTLL
                     RIIANLETADGGDIELLGDEVCKNGVCSKNKKVGMMFQNYALFPHINVSENIAFALHA
                     LPKYQRNQKVLELLDKFHISELKDKMIDKISGGQAQRVAFARAVANEERLLLLDEPFA
                     NLDSHLKNMLRNELKAMIKENSLSAIMVTHDKFDAFLLSDKIALISRGEVLACATPRE
                     LYFEPKTAEIAKFLGDINEITADAALSLPDKFKNWLEAKNFMFRPEEIISSNEFEAKV
                     ISSQFLGANYKLELDFMGVRFHTFVSSIYDINSSFKFGLA"
     gene            2777..3754
                     /locus_tag="RPW04_001813"
     CDS             2777..3754
                     /locus_tag="RPW04_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF475 domain-containing protein"
                     /protein_id="HDX6295890.1"
                     /translation="MKYFYSSFIITILGLLLAYFIGGFLAVYICFLLGILEVSLSFDN
                     AVVNAKILSGMNKKWQDRFIIFGIPIAVFGMRFLFPILIVSVAANLGMWETFSLALND
                     PDAYHNALSANKNQIYIFGGAFLLMVFLSFFFEEKDVKWIRFIEDNYLVHILSKTNSI
                     ALFIAILTGMIIVFLTQNTSYALSYFGAVLLHMALSLFDDIFSANGVKSGFMGFLYLE
                     VLDASFSFDGVIGAFAMSENIFIIMIGLGIGAMFVRSLTIYMVHKKTLESFIYLEHGA
                     HYAILALAIIMFINVFHEVGEAITGTIGFGLIVIAFLSSIYKNKKITNG"
     gene            3747..4316
                     /locus_tag="RPW04_001814"
     CDS             3747..4316
                     /locus_tag="RPW04_001814"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002847926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDX6295891.1"
                     /translation="MAKICGIDEAGRGALAGELVVAGCVFKPKFKKEIIKLGLSDSKK
                     LTEQKREEIFLNLEKMSDYLVVYFRNTIVDKIGLSDCLRRALNVIKMHFNECNFIYDG
                     NCDYGVKNIKTIVKADSSVPQVSAASIIAKVSRDRQMRRFDKIYPDFGYAKHKGYGVK
                     AHIEALKQHGSNELTRLSFHLKALEKSLF"
     gene            4324..>4936
                     /locus_tag="RPW04_001815"
     CDS             4324..>4936
                     /locus_tag="RPW04_001815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDX6295892.1"
                     /translation="MDILEYFYQNPPKNPKFIDRKTYFNGNKIILQGAINSGKTALLI
                     QYLEEFGQDFLYLNLEDIRVDFIPNLNEFIKDKKIKAIGFDGVKNDFYTPCKCDNIII
                     STTSNSFFIDKFTKVKLNGLDYEEFIAFYRKNYEAKTLFSHFLARGNGAKSAFLQDFE
                     VSEFLQMKIKAYLGEQKAKILSKIAAYVHQPFNTHKIYKDLKET"
BASE COUNT         1695 a          747 c          861 g         1633 t
ORIGIN      
        1 ggacatataa cacacaaacc gcttgagcag agttgtcacg atcacgcaag tgaccatcat
       61 cgcgcacatt cacactctca ctcatcggca aatacaaata aaaaagttct caaaatcagc
      121 ctttttataa cagttgccgc tatgatattt caatttgtat atgcgctaat cacaaactct
      181 ttagcgctta tgagcgatac tttgcatatg ctatcgcacg taatagcttt ggggcttagt
      241 tggtttgcca tatgggctgc ttctagcttt agcagtgagc aaaaaacatt tggataccac
      301 agacttgaga cgatagcggc ttttataaac tcgattttga tagctgtttt tggtctattt
      361 atagtgtatg aagccattgt taagctcata aatccagaac cgatcgagat aggtacaatg
      421 cttatagtgg ctgcgatagg tctaggagta aatatcacga ctggattaat aatgctaaaa
      481 ggggatatgg gtaatttaaa tatcaaatca agttttgctc atatgatgag cgatttatta
      541 agttctgtag ctataatttt aggcggcata atagtatatt ttacaaattt atggtggata
      601 gacagtgctt tggctctatt tatcgctatc ataatagcta aatggtcatt ttctctagca
      661 agagacagta tgaacatact attagaagca tctcctatag atataaacgc agcaaaaaac
      721 gttatgctag aaaacccttt agttttagac gtgcatgact tacatataag tgaaataact
      781 cataaaatgt acgttttgac tgctcatata gttcttaaca aggataatat ttttaaattt
      841 gatgaaataa tcaacgatct atctcttagt ttaaaaaata gactcgaaat aggtcacata
      901 actatccaac ccgagtggcg ggagagttag agattaaatt taaaataaaa cggcatttac
      961 aaatatataa aaatcggtcg catgataagt tggatttaaa aattaatatg ataaatttat
     1021 aatattgtat ttattttaaa gggatataaa tttgaaaaag ctagttttgg tttatatttt
     1081 aagtactgtt ttagcgtttt gcaaagatta tgaaaacggt ttgaaagcat acgaaaaagg
     1141 agattacaaa agtgcggtca taagctttca aaaagcgtgc gataaaggaa atatgaacag
     1201 ctgttatact cttggaaatt tatatgtatt aaatcaaggc gtaaagcaag attataaaaa
     1261 agccgtaaaa ttatttcaaa aagcgtgcga tggcggagaa gcaaaagctt gcggatatct
     1321 aggagtaatg tacgaaaacg gtaacgcagt agagcaaaac cgccaaatag ctgcaaagtt
     1381 atatgaaaaa gcgtgtgaaa tgggacatta tatcagttgt agcgagcttg ggattatgta
     1441 tgcaaatgga aactttatat caaaagacta ctataaagct atggaattat ttaaaaaagc
     1501 gtgtgaaatg ggagaggcaa acggatgtaa ttatctagcg ctaatgtatt ttatctactc
     1561 agaaaaaagc ggcatagaac aagatgctat caaagcaaaa gactattttt gtcatgcatg
     1621 cgaaatggga tttgaagatg cttgtgagag ctgcaacatg cttagtcaaa aacaagatta
     1681 agcaaaaaac ttaagctaaa ccaaatttaa aactactatt tatatcatag atcgaactta
     1741 caaaagtatg aaatctaact cccataaaat caagctcaag tttataattc gcacctaaaa
     1801 actgtgagct tataacttta gcttcaaact catttgagct tattatctct tctggtctaa
     1861 acataaaatt ttttgcctct aaccagtttt taaatttatc tggcaaactt aaagcagcgt
     1921 ctgcggttat ctcgtttata tcgcctaaaa acttagctat ttcagccgtt tttggctcga
     1981 aataaagttc tcttggcgtt gcgcaagcca aaacttcacc tcttgatatg agagctatct
     2041 tatcgcttag caaaaacgcg tcaaatttat cgtgagtgac cattatagcg cttaacgaat
     2101 tctcttttat catagctttt agctcatttc taagcatatt ttttaaatgt gaatctaaat
     2161 ttgcaaatgg ttcgtctaaa agcaaaagcc gctcctcatt tgccacggct cttgcaaaag
     2221 ctactctttg agcttgaccg ccgctgattt tatctatcat tttatctttt aactcgctta
     2281 tgtgaaactt atctagcaac tctaaaactt tttgatttct ctgatatttt ggtaaagcgt
     2341 gaagcgcaaa agcgatattt tcagatacgt ttatatgcgg aaacaaagca tagttttgaa
     2401 acatcatacc tactttttta tttttactgc atactccatt tttacatacc tcatcaccta
     2461 aaagctcgat atctccgccg tctgcggttt ctaaatttgc tattattcta agaagagttg
     2521 atttaccgca tccgctaccg cctaaaatag tcagtatctc gcctgagttt aaactaagat
     2581 ttatatcttt taaaacagtg ttatttccga attttttact caaatggcta atttttagta
     2641 tctcttgcaa attctctcct aaataaattt gagctattat acattaaaat atttaatgat
     2701 atttaatatc attaatcaaa cattataata ttaaatcaat ttatgctata atatttttca
     2761 cttttttgga gattttatga aatactttta ctcatcattt attattacga ttttaggtct
     2821 tttgcttgca tattttatcg gtggtttttt agcggtttat atctgttttt tgcttggaat
     2881 tttagaagtt agtcttagct ttgataatgc tgttgtcaat gctaaaatac tatctggaat
     2941 gaacaaaaaa tggcaagata gatttataat tttcggtatt ccgatcgctg ttttcggaat
     3001 gagattttta tttcctatcc ttatagtttc agtcgcggca aatcttggaa tgtgggaaac
     3061 attctcttta gctttaaacg atcctgatgc ttatcacaac gcattaagtg cgaacaaaaa
     3121 tcaaatttat atatttggcg gtgcgttttt gttaatggtg tttttgtcgt ttttctttga
     3181 ggaaaaagat gtaaaatgga taagatttat agaagataac taccttgtgc acatactttc
     3241 taaaacaaat tctatagcgc tttttatagc gatactaaca ggcatgatca tcgtattttt
     3301 aacacaaaat actagttacg cactatcgta tttcggtgcc gtgcttttgc atatggcgct
     3361 atctttgttt gatgatattt ttagtgcaaa tggcgttaaa agcggtttca tgggattctt
     3421 atacttagag gttttggatg ctagctttag tttcgatgga gttatcggcg catttgcgat
     3481 gagtgaaaat atctttatta ttatgatagg tcttggaatc ggagctatgt ttgtaagaag
     3541 cttaacaatt tatatggtac ataaaaaaac tcttgaaagt ttcatctatc ttgaacacgg
     3601 agcgcattac gccattttgg cgctagctat cataatgttt ataaatgttt ttcatgaagt
     3661 cggcgaggcg ataacaggaa ccataggatt tggacttata gtaattgcgt ttttaagctc
     3721 tatttataaa aataaaaaga taacaaatgg ctaaaatttg cggcatagat gaagctggac
     3781 gcggagcgtt ggcaggtgaa ttagttgtag ctggatgcgt gtttaagcct aaatttaaaa
     3841 aagaaattat taaacttgga cttagcgatt caaaaaaatt aaccgaacaa aaaagagagg
     3901 aaattttttt aaatttagaa aaaatgagcg attatttagt agtttatttt aggaatacta
     3961 tagttgataa aatcggactt agcgactgct taaggcgtgc tttaaacgtg ataaaaatgc
     4021 attttaacga gtgtaatttt atctatgatg gaaactgcga ttacggtgtt aaaaatataa
     4081 aaactatcgt aaaagccgat tcaagcgtcc ctcaagtaag tgcagctagt ataatagcaa
     4141 aagttagcag agatagacaa atgagacgtt ttgataaaat ttatccagat tttggatatg
     4201 caaaacataa aggatacggc gtaaaagcac atatagaagc tttaaaacaa catggctcaa
     4261 acgaactaac aagacttagt tttcatctaa aagcgcttga gaaatcgcta ttttaggtat
     4321 gttatggata ttttagaata tttctatcaa aatccgccaa aaaatccaaa atttatagat
     4381 agaaaaacgt attttaacgg taataaaatt attttacaag gagctataaa tagcggtaaa
     4441 acagcacttt taatacagta tttagaggag ttcggacaag attttttata tttgaactta
     4501 gaagatatta gagttgattt catccctaat ttaaatgagt ttataaaaga taaaaagata
     4561 aaagctatag gattcgatgg agtaaaaaac gacttttata ctccttgcaa atgcgacaac
     4621 atcattattt caaccacttc aaactcgttt tttatagata aatttacaaa agttaaatta
     4681 aatggacttg actatgaaga gtttatagca ttttatagaa aaaattacga agcaaaaact
     4741 ctatttagtc attttttagc tcggggaaac ggcgctaaaa gtgcattttt gcaagatttt
     4801 gaagtgagtg aatttctgca aatgaaaatc aaagcttatc ttggcgaaca aaaagcgaaa
     4861 atactctcaa aaatcgccgc ttacgtacat cagccattta atactcataa aatttataaa
     4921 gatttaaaag agacta
//
LOCUS       DAPPKW010000113         4855 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.113, whole genome shotgun sequence.
ACCESSION   DAPPKW010000113 DAPPKW010000000
VERSION     DAPPKW010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4855)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4855)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4855
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.113"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..336
                     /locus_tag="RPW04_001816"
     CDS             <1..336
                     /locus_tag="RPW04_001816"
                     /inference="COORDINATES: protein motif:HMM:NF024950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDX6295893.1"
                     /translation="FISSDSAKNGRAAPAYVASKAALNAYMKSCARYYAKDNIVFFSV
                     LPGIVYFKNSAWDKKKQTDPNTFNQKLQNSIFKEFATPNHIANFVLSMLNSNNKFING
                     GEFIINGGE"
     gene            323..1282
                     /locus_tag="RPW04_001817"
     CDS             323..1282
                     /locus_tag="RPW04_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPASM domain-containing protein"
                     /protein_id="HDX6295894.1"
                     /translation="MAENNLEQKKKEIKERFNFNKFEDYIKFPKYFEFETVNACNARC
                     KMCTVTQWDGYDQKDKFKRVVSDELWNKFVKNVQPYSKWIEKITLTRDGETLLDSKIA
                     HRINELKKAGIKQVVIVTNASLLSQKKSIELLNSGLDEIMISIDGFTKQTYESIRIGL
                     KYEKVLQNTLNFIKIREKLGVNTTMRIRLIEQKENMKEIDNFIKFWKNNTRSSDQVYS
                     MALHSWGNQLIKENEEKVKEWGKKACISPFSSMAIHFDGRVGMCGVDFNCKYKTGDLN
                     LNSIEEIWRGEIFSAIRSNHLNSNRNAYELCKGCNLWDRVYKK"
     gene            1338..1781
                     /locus_tag="RPW04_001818"
     CDS             1338..1781
                     /locus_tag="RPW04_001818"
                     /inference="COORDINATES: protein motif:HMM:TIGR04366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WbuC family cupin fold metalloprotein"
                     /protein_id="HDX6295895.1"
                     /translation="MILSEKTADKNAKTPTFFIGECGSISEQNINELKKYALKNNTTA
                     RLNLFSDSTDLLQYMLIFHPYKTELTHKYIAQHSIYMLLEGEFKIIIYNDDMSINKEF
                     VLNKKLNKTVRIPKNTFYKMEMISDQLLFIEIRNGPFKRENQIII"
     gene            1790..3061
                     /locus_tag="RPW04_001819"
     CDS             1790..3061
                     /locus_tag="RPW04_001819"
                     /inference="COORDINATES: protein
                     motif:HMM:NF020013.1,HMM:NF020073.1,HMM:NF024880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDX6295896.1"
                     /translation="MSEKPYKTDICRLCGEKMQEVVQLSPSPIGDIFKDTKKEAAKLT
                     ICEYNLLHCKQCNNVQISIDPTSNIYKDYIYISSTSVDLQNHYKALSGKLVNELKKEH
                     AFIVEFGSNEGLLLELINEELTRTSMGGGITKTWEILGIDPSPMAAKMANQKGIPTIN
                     DYFNQDLAKKISLEKGKADLIVANFVMANISDMYSIAKSINELLDKDGVFVFETGYLC
                     DILRFNLIDTIYPEHLNYYSLSSLKKYLEKFGLRIFRAENTTAKGGALRVWVCKNEAK
                     IALENSVQIIMDMENNFFSNQNIFKDFLNRLSEFKVEVKNLAKQIKDKEKLLVYGASI
                     GCIVMIEQFELGEKIDYLIDDNELKIGKFSPSRAIEVKSSEFLLQSGVKNVINLAWRF
                     CEPIKQKNKKFLENGGTIYNINLKNLKIDKV"
     gene            3058..4131
                     /locus_tag="RPW04_001820"
     CDS             3058..4131
                     /locus_tag="RPW04_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006655337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HDX6295897.1"
                     /translation="MKMINWWSNNFDEKEIKAVSDAILSKCISQGDITNKFEKELAKF
                     LQVPYCICVPNGTQAITLSFMACGIEYGDEIITSNRTFIGTAHAGLILGAKIVAVDVK
                     DDMSIDYNLIENKITNKTKLIVPVHLNGIANDMEAISKIADDNKITIVEDACQAFGSK
                     YNGKFLGTFGRFGCFSLGIAKILSTGQGGVVTANNEEDYKLLQKIRNQGVFDVRKEQN
                     YGIKAFNFKFNDMQAAIGLAQLSKINKKIETCKDIYQTYKEKLDGKINYVQCNLESTM
                     PMRFLVLHQRNQELKEWLMNQGIGSSLDAPSLNLCPHLNISGKYPISNKFHKELLILP
                     SGPSQKISDINKVANKVLEWLGV"
     gene            4116..>4855
                     /locus_tag="RPW04_001821"
     CDS             4116..>4855
                     /locus_tag="RPW04_001821"
                     /inference="COORDINATES: protein motif:HMM:NF012760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDX6295898.1"
                     /translation="MARCIVLGTSKFTASLIYGIIDSLNEVSCVISMPDTSKPNNPYD
                     LKKICNKFGIKYYEFEDINSAEAINLIKKINPNFIVSSWPKIIKNEILNLAYVIGTHP
                     TNLPKDRGRHPLHWNIIRGIKKSKLSFFKMDKNIDSGNLLLQLKYAISKYDDINSLNH
                     KIEKLAKTGINKLLSRNKMKEIAQSGNTNYLRARNIHDCLIDPRMEYKTIDRIVRSFT
                     SPYPCAKLIVENQILNIKKCCLIEKGDK"
BASE COUNT         2025 a          624 c          828 g         1378 t
ORIGIN      
        1 tttatctctt cagatagtgc taaaaacggt agagccgctc cggcgtacgt agctagcaaa
       61 gcagcattaa atgcatatat gaaatcctgt gcaaggtatt atgctaaaga taatatagta
      121 ttttttagcg ttttaccggg catcgtatat tttaaaaata gcgcatggga taagaaaaaa
      181 caaaccgatc caaatacatt caatcaaaaa ctacaaaata gcatatttaa agaatttgca
      241 acacctaatc atatagcaaa tttcgtatta agtatgttaa acagcaataa taaatttata
      301 aatggcggag aatttatcat aaatggcgga gaataattta gaacaaaaga aaaaagagat
      361 aaaagaacgt tttaatttta ataaatttga agattatatc aaatttccaa aatactttga
      421 gttcgaaaca gtcaatgcat gtaatgcaag atgcaaaatg tgtaccgtga ctcagtggga
      481 tggatacgat caaaaggata aatttaaaag agtggttagc gacgagttat ggaataaatt
      541 tgttaaaaac gtacaaccgt acagcaaatg gatagaaaaa attacgctta caagagatgg
      601 tgaaactctt ttggatagca aaattgcaca tcgtataaat gagcttaaaa aggcaggtat
      661 caaacaagta gtaattgtaa ccaatgcatc tttactaagc cagaaaaaaa gtatagagct
      721 attgaactct ggattagatg aaataatgat ctctatagac ggttttacga aacagaccta
      781 tgaaagtata agaataggat taaaatatga aaaagtactt caaaacacat taaattttat
      841 caaaataaga gaaaagctag gtgttaacac gacaatgaga attaggctaa tagaacaaaa
      901 agaaaatatg aaagagatag ataattttat taaattttgg aaaaataata caagaagcag
      961 cgatcaagta tattcaatgg cgctccatag ctggggaaat caacttataa aagaaaatga
     1021 agaaaaagtt aaagagtggg gtaaaaaagc atgcatatcg cctttttcat caatggctat
     1081 acattttgat ggaagagttg gaatgtgcgg cgtagatttt aactgcaaat acaaaacagg
     1141 ggatttaaat ttaaatagca tagaagagat ttggcgcggt gaaatattca gtgctatacg
     1201 atctaatcat ttaaactcta atagaaatgc ttatgaacta tgcaaaggct gcaatctttg
     1261 ggatagagta tataaaaaat aattgctata aaagatagtt tttgatataa tcagccaaaa
     1321 aaacagaggg taagatcttg atactttcgg aaaaaacggc agataaaaat gcaaaaactc
     1381 caacattttt tattggtgaa tgcggctcta tatccgagca aaatattaat gaactaaaaa
     1441 aatatgcttt gaaaaataac accacagcaa gacttaatct attttctgat agtacggatt
     1501 tattgcaata tatgttaatt tttcatccct ataagaccga attaacacat aaatatattg
     1561 ctcaacattc tatatatatg cttttagaag gtgaattcaa aataataata tataatgatg
     1621 atatgagtat aaataaagaa tttgtattaa ataaaaaatt aaataaaaca gtaagaatac
     1681 caaaaaatac attctacaaa atggaaatga taagcgatca actgcttttc atagaaatta
     1741 gaaatgggcc ttttaaaaga gaaaatcaaa taattattta aggaataata tgtcagaaaa
     1801 accatataaa acagatattt gtaggttatg cggagaaaaa atgcaagaag ttgtacagtt
     1861 atctcctagc ccaataggcg atatttttaa agatacaaaa aaagaagcag ccaaactaac
     1921 aatatgcgaa tataatttac tgcattgcaa acagtgcaat aatgtgcaaa tatcaataga
     1981 tccgacaagt aatatttata aagattatat atatatctct agcacatcag ttgatttaca
     2041 aaatcattat aaagcattaa gcggaaaact agtaaatgaa ttaaaaaaag aacatgcatt
     2101 tatagttgaa tttggtagca atgaaggact acttttagaa ctaatcaatg aagaactaac
     2161 aagaacatct atgggggggg gtattacaaa aacatgggaa atactaggta tagatcccag
     2221 ccctatggcg gcaaaaatgg ctaatcaaaa aggtattcct actataaatg attattttaa
     2281 tcaagattta gctaaaaaaa tcagcttaga aaaaggcaaa gcagacctaa tagtagcaaa
     2341 ttttgttatg gcaaatatat cagatatgta ctctatagct aagtctataa atgaactgtt
     2401 agataaagat ggtgtttttg tttttgaaac tggatattta tgcgatatat taagatttaa
     2461 tcttatagat acgatatacc cagaacatct aaactactat agtttaagct ctttaaaaaa
     2521 gtatttagaa aagtttggac tgcgtatatt tagagccgaa aatactactg ctaaaggggg
     2581 tgcattgcgc gtatgggtat gcaaaaatga ggccaaaata gctttggaaa atagcgtgca
     2641 aataataatg gatatggaaa ataacttttt ttcaaaccaa aatatattca aagacttcct
     2701 aaacagattg agtgaattta aagtagaggt aaagaattta gctaaacaga taaaagataa
     2761 agaaaaactc ttagtttatg gggctagtat aggctgtata gttatgatag agcagtttga
     2821 gcttggagaa aagatagatt atctcataga tgacaatgaa cttaagatag ggaaatttag
     2881 tcctagccga gctatagaag taaaatcaag tgagttttta ctgcaatcag gagtaaaaaa
     2941 tgtaataaat ttagcatggc gtttttgtga gcctataaaa caaaaaaata aaaaattttt
     3001 agaaaatggc ggtacaattt ataatataaa tttaaaaaat ctaaagatcg ataaggtata
     3061 aaaatgatta actggtggag caataatttt gatgaaaaag agataaaagc tgtgagtgat
     3121 gccatattat caaaatgcat ctctcaagga gatataacaa acaaattcga aaaagaactg
     3181 gcaaaatttt tacaagttcc atactgcata tgtgtgccaa acggaactca agccataaca
     3241 cttagcttta tggcgtgcgg aatcgaatat ggcgatgaaa tcataacatc aaatagaact
     3301 tttataggca cggctcacgc cggtttaata cttggcgcta aaatagttgc agtagatgta
     3361 aaagacgata tgagcataga ttataattta attgaaaaca aaattacaaa taaaactaaa
     3421 cttatagttc cggtgcattt aaatgggata gcaaacgata tggaagctat aagcaaaatt
     3481 gcagatgata ataaaataac aatagttgaa gatgcttgtc aagcttttgg atcaaaatat
     3541 aacggaaaat tcttaggtac atttggcaga ttcggatgtt tttctttggg tatagccaaa
     3601 attcttagta ctggacaagg cggagttgta acggctaata acgaagaaga ctataagcta
     3661 ttacaaaaaa tacgaaatca aggcgtattt gatgtaagaa aagagcaaaa ctatggtatt
     3721 aaagcattta actttaaatt caatgatatg caagccgcaa taggtctagc tcaactttca
     3781 aaaattaata aaaaaataga aacatgcaaa gatatttatc aaacttataa agagaagtta
     3841 gatggaaaaa tcaactatgt tcaatgtaac ttagaatcaa ctatgcctat gagatttttg
     3901 gtattgcatc aaagaaatca agaattgaaa gaatggctta tgaatcaagg tatcggttct
     3961 tctcttgatg caccttctct taatctatgt ccgcatttaa atataagtgg aaaatatcct
     4021 ataagcaata aattccataa agagcttttg atacttccat ctggtcctag tcaaaaaata
     4081 tcagatataa ataaagtagc aaataaggtt ttagagtggc taggtgtata gttttaggaa
     4141 ctagcaaatt tacagcgagt ctcatatacg gtattataga tagcttaaat gaagtatctt
     4201 gcgtcatttc tatgcctgat actagtaagc ctaataaccc atatgatcta aaaaaaattt
     4261 gcaataagtt tgggattaaa tattatgaat tcgaagatat aaattcagca gaagctataa
     4321 atttgataaa aaagataaat cctaatttca tagtatcatc atggccaaaa attattaaaa
     4381 atgaaatttt gaatttagct tatgttatag gaactcatcc aaccaaccta ccaaaagata
     4441 gaggcagaca tccgcttcac tggaatataa taagaggtat taaaaaatct aaactaagct
     4501 tctttaaaat ggataaaaac atagatagcg gaaatttact gcttcaacta aaatatgcta
     4561 tttcaaaata tgatgatata aattcattaa atcacaaaat agaaaaatta gcaaaaactg
     4621 gaattaataa acttctatct cgcaataaaa tgaaagagat agctcaaagc ggcaatacaa
     4681 actatctaag agctagaaat atacatgact gcttaataga tcctagaatg gagtataaaa
     4741 caatagaccg catagtaagg tcatttacta gtccatatcc atgcgctaag ctaatagtag
     4801 aaaatcaaat tttaaatata aaaaaatgct gtttaattga aaaaggagat aaatt
//
LOCUS       DAPPKW010000114         4822 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.114, whole genome shotgun sequence.
ACCESSION   DAPPKW010000114 DAPPKW010000000
VERSION     DAPPKW010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4822)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4822)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4822
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.114"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..805)
                     /locus_tag="RPW04_001822"
     CDS             complement(<1..805)
                     /locus_tag="RPW04_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDX6295899.1"
                     /translation="MDNFLELFLAATAFAIVLNVFFKRYEIPTIIGYIVTGIFISKTF
                     GLTYNTDLTHIAEFGIVFLMFTIGLEFSFKHLLTMKKEVFLNGIIQVFVTGIIFSMIA
                     QYAFDIGQQTSLIIGFALSLSSTAIVLKTLNDNGDISQVYGRKALGILLFQDIAVIPL
                     LLMIDIFSSKTTSVSDLVTTTLTSAIILLFLLYFIGKYLFNWMLYLVIKTNSQEIFIT
                     TILFSVVGASFLAHYFGFSYSLGAFIAGMLIAETQYKHQIEADLIPFRDL"
     gene            complement(811..1185)
                     /locus_tag="RPW04_001823"
     CDS             complement(811..1185)
                     /locus_tag="RPW04_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDX6295900.1"
                     /translation="MMKSYDEPVYLISVVAKVLSIHPQTLRQYEREGLVEPSRTGGKM
                     RLYSEKDLDRIKMILRLTRDLGVNLAGVDVILRLKTQIEEYENIIDELRLNLEKINSS
                     DTKRSLVKRKNSFDLIFLNDEK"
     gene            complement(1194..2066)
                     /locus_tag="RPW04_001824"
     CDS             complement(1194..2066)
                     /locus_tag="RPW04_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ family protein"
                     /protein_id="HDX6295901.1"
                     /translation="MSNSLYETLGVDKNATSDEIKKAYRKLARKYHPDINKEAGAEEK
                     FKEINAAYEILSDDEKRAQYDTHGDSMFGGQSFHDFASSQNGADINDILRNIFGGGFG
                     GFSSRSSFSSRDFGGFNGFGSGFEQNLDINSKITIPFNVAINGGEYSININGQSVKIK
                     IPAGINSGEKLRIRGKGKSSNGAKGDVLLSVEVSEDSKFKREGDDLYMPIDIPLKIAL
                     FGGKISVDTFKKSVNIKIAPNTKNGQKIRLKGYGVQNRKSGIFGDMYLSVNVVLPDVS
                     SMDKELVKVLEEKL"
     gene            2276..3691
                     /locus_tag="RPW04_001825"
     CDS             2276..3691
                     /locus_tag="RPW04_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002853235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HDX6295902.1"
                     /translation="MNKLTIISIITAASLFGADVKFSDANNNYARVNPSADANTVLSY
                     HSSIEKAKKSVVNISTSKTIKVKNNLNSLMDDPFFKEFFGFNFKTPKERSQKATSLGS
                     GVIISNDGYIVTNYHVVEDSDEIIVTLLDNSKEYKAKVVGIDPKTDLAIIKIDAKNFQ
                     AISFADSSKLLEGDLVFAIGNPFGVGGSITSGIISGLNKDNIGLNQYEDFIQTDASIN
                     PGNSGGALVDSRGALVGINSAILSRSGGNNGIGFAIPSNMVKTIAQKLISDGKITRGY
                     IGVMISNLTDDQKEIYTNKEGALVTNVEKDKPADIAGLKRGDLIIKVGNQTIKNANDL
                     KNLIGSLEPNKEIKITFERSNQIKDTTLKLANMDSGYIDPKDAYLTDGLSLQNLSDEI
                     RYKFQIPKDIKGIIITNVKDDSNAANAGFEAGDIIVQVNEKIIYNVDDFTKEIKSSKA
                     QNKKPIIWINRSGVLMGLVLK"
     gene            3778..4452
                     /locus_tag="RPW04_001826"
     CDS             3778..4452
                     /locus_tag="RPW04_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004321206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDX6295903.1"
                     /translation="MINILMIEDDLELAEILTEYLEQFDVRITTCEDPYLGLSTLNTS
                     KFDLVILDLTLPGIDGLEVCKEIRKKNDIPIIISSARHDLSDKVNAFEFGADDYLPKP
                     YNPQELLVRIKSHLRRQNIKQREENKAKKDLICDDFKHIITLKGTPLNLTVAEYDILK
                     YLIKKEGGAISREELIYNCDSINEDSTNKSIDVIIGRIRVKLGENPKEPKYIHAIRGV
                     GYKLEQ"
     gene            4449..>4822
                     /locus_tag="RPW04_001827"
     CDS             4449..>4822
                     /locus_tag="RPW04_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HDX6295904.1"
                     /translation="MKFSSIFYTITLIFAIATTSIFLAFLWLMDYDKQNYTRELNTKY
                     SVVARATLLYMSELIDENEYKSQIQNFEMPEIKNQKLKSEILTNASILEEISADIGSS
                     AILFFKKRNYLKIVHKDTTLLL"
BASE COUNT         1809 a          824 c          711 g         1478 t
ORIGIN      
        1 gcagatctcg aaaaggtata agatcagctt ctatctgatg tttgtactga gtttctgcta
       61 taagcatacc ggctataaaa gctcctaaag agtagctaaa accaaaataa tgcgccaaaa
      121 aactagctcc aaccacgcta aataaaatag tcgttataaa tatctcttgt gaatttgtct
      181 tgataactaa ataaagcatc cagttaaaca gatactttcc tataaaatac aacaaaaata
      241 gaagtataat cgcacttgtt agagtcgtcg tcacaagatc gcttacagaa gttgtttttg
      301 aactaaatat atctatcata agaagcaacg ggataacggc gatatcttga aaaagaagta
      361 ttccaagagc ttttcttcca taaacttgac ttatatctcc gttatcgttt aatgttttta
      421 atacaatagc tgttgaactc aaagatagag caaagcctat tataagcgat gtttgttgtc
      481 ctatatcaaa agcgtattga gcgatcatgg aaaatataat tccagttaca aaaacctgaa
      541 ttattccatt taaaaacacc tcttttttca tagtcaaaag atgcttaaaa ctaaactcca
      601 gtcctatcgt aaacatcaaa aatacaatgc caaactcggc tatatgagta agatcggtat
      661 tgtaagtaag tccgaaagtt tttgatataa atatgccagt tacaatatat cctataatag
      721 taggaatttc atacctttta aaaaatacgt taagcactat agcaaatgca gtagctgcta
      781 aaaacagctc taaaaaattg tccattttaa ttacttttca tcattcaaaa atatcaaatc
      841 aaagctattt tttctcttta ctaaagatcg ttttgtatcg ctgctattta tcttttctaa
      901 atttaatctc aattcgtcta tgatattttc atactcctca atctgagttt tcagtcttaa
      961 tatcacatcg actccggcta aatttacacc caaatctcta gtcaatctta aaatcatctt
     1021 tattctatca agatcttttt cactataaag tctcattttt ccgcccgtac gagaaggttc
     1081 tactaaacct tctctctcat actgacgtag agtttgagga tgtatactaa gaactttagc
     1141 aacaacgcta attaaataaa ccggctcatc ataacttttc ataattttac tccttaaagc
     1201 ttctcttcaa gtaccttaac tagctcttta tccatagagc taacatcggg caagactaca
     1261 tttacactaa gatacatatc tccaaaaata ccactttttc tattttgtac gccataacct
     1321 ttaagtctta ttttttgacc gttttttgta tttggagcta tttttatatt aacacttttt
     1381 ttaaatgtat caacactaat ttttccacca aaaagcgcaa ttttaagtgg aatatctata
     1441 ggcatataaa gatcatcgcc ttctctttta aatttagaat cctcagaaac ttcaacactt
     1501 aacaaaacgt ccccttttgc tccgtttgaa ctctttcctt ttcctcttat gcgtagcttt
     1561 tcgccactat ttatgccagc aggtattttt atcttgacgc tctgtccgtt tatgttgata
     1621 ctatattctc cgccgtttat agctacgtta aaaggaatgg ttatttttga gtttatatct
     1681 aaattctgct caaatccgct tccaaatcca ttaaaacctc caaaatccct actgctaaaa
     1741 ctacttcgac tactaaaacc gccaaatcca ccgccaaaaa tatttcttaa aatatcattg
     1801 atatcggctc cgttttggga acttgcaaaa tcatgaaaac tttgaccgcc aaacatacta
     1861 tcgccgtgag tatcgtactg agcacgtttc tcatcgtcac ttagtatctc ataggctgcg
     1921 tttatctctt taaatttctc ttctgctccg gcttctttat ttatatcggg atgatatttt
     1981 cttgctaatt ttctatacgc cttttttatc tcatcgctag ttgcgttttt atctactcca
     2041 agagtttcgt ataagctatt actcataata ctacctcact tatgttattt tatatgaatt
     2101 atagcacaat acttgagctt atgtcaatca actttaagtt aatttcaaac attttcattt
     2161 tcaaattcta gttgttatta aatttaaaaa aactatacaa actaaaaata tattaaactt
     2221 acatttatcg ctaagtaata taatttgcat tacaaaattt aaaaaaggaa caactatgaa
     2281 taaactaacg attatttcta taataacagc cgcaagtcta tttggcgcag atgttaaatt
     2341 tagtgatgca aataacaact acgcaagagt aaatccaagt gcagatgcaa atactgtttt
     2401 atcatatcac agctctatag aaaaagctaa aaaatctgta gtaaatatat caacatcgaa
     2461 aactataaaa gtaaaaaaca atctaaatag tctaatggac gatccgtttt ttaaagaatt
     2521 ttttggattt aacttcaaaa ctccaaaaga aagaagtcaa aaagcaacgt ctttaggatc
     2581 cggagtaatc atctcaaacg atggatatat agtcacaaac tatcatgtag tcgaagatag
     2641 cgatgagatc atagtaacat tgcttgataa ttcaaaagag tataaagcaa aagtagtcgg
     2701 catagatcca aaaacagatc ttgctattat aaaaatagat gctaaaaact ttcaagctat
     2761 aagttttgcc gatagttcaa aacttcttga aggagacctt gtatttgcta taggaaatcc
     2821 atttggcgta ggcggaagta taacaagcgg aattatttca gggttgaata aagataatat
     2881 aggattaaac caatatgaag atttcataca aacagacgct agcataaatc cgggaaatag
     2941 cggtggagcg ctggtagata gcagaggagc attagtcggt ataaactctg ccattcttag
     3001 cagaagcggc ggaaataacg gcattgggtt tgctattcca tcgaatatgg taaaaacaat
     3061 agcgcaaaaa ctaatctcag atggaaaaat cacacgcgga tatataggcg ttatgatatc
     3121 aaatttaacc gatgatcaaa aagaaattta tacaaacaaa gaaggtgctt tagtaacaaa
     3181 cgtagaaaaa gataaaccag ccgacatagc aggtcttaaa agaggagacc ttataataaa
     3241 agttggaaat caaacgataa aaaacgcaaa tgatctaaaa aatctcatag gatcattaga
     3301 accgaacaaa gagataaaaa taacgtttga aagatcaaat cagataaaag atacaacatt
     3361 aaaactagca aatatggact caggctatat agatccaaaa gatgcgtact taacagacgg
     3421 acttagttta caaaatttaa gcgatgaaat aagatataaa ttccaaattc caaaagatat
     3481 aaaaggaatc ataattacaa atgttaaaga tgattcaaat gctgcaaatg caggctttga
     3541 agcaggagat ataatcgttc aagtgaatga aaaaataata tataacgtag atgatttcac
     3601 aaaagagata aaatcaagca aagctcaaaa caaaaaacct atcatttgga taaacagaag
     3661 cggcgtattg atgggattag tactaaaata atataaaagc cggtcaaatg ccggctgtat
     3721 ttaaaaatat atttaatctt tcttagttat aataaaatca aatttaaaag gctttgcatg
     3781 ataaatattt taatgatcga agacgattta gagcttgctg aaattttaac agagtattta
     3841 gaacaatttg acgtacgtat cactacttgc gaagatccgt atttaggact ttccacacta
     3901 aatacaagta aatttgatct agttatttta gatcttactt tgcccggtat cgatggactt
     3961 gaagtatgca aagagataag aaagaaaaat gatattccta ttattatttc aagtgcaaga
     4021 cacgatctaa gcgataaagt aaatgctttt gagtttggag cagacgacta tcttccaaaa
     4081 ccatataatc ctcaagaact gctagttaga ataaaaagcc atttaagaag acaaaatatc
     4141 aaacaaagag aagaaaataa ggcaaaaaaa gatctaattt gtgatgattt taaacatatt
     4201 ataacactaa aaggaacgcc tttaaatctc acagtcgccg aatacgatat actaaaatac
     4261 ttaattaaaa aagaaggagg agctataagt agagaagagc ttatttataa ctgcgactct
     4321 ataaacgagg atagtacaaa caaaagcata gatgttatca taggacgtat aagagtaaag
     4381 cttggcgaaa atccaaaaga gccaaaatac attcacgcta tacgcggcgt tggctacaaa
     4441 ctagaacaat gaaattttca tcgatttttt atacgataac tctaattttt gctatagcta
     4501 cgactagcat ttttcttgcg tttttatggt tgatggatta tgataaacaa aattatacaa
     4561 gagagctaaa cacaaaatac tcagtcgttg caagagctac tttactttat atgagcgaac
     4621 ttatagatga gaacgagtac aaaagccaga tacaaaattt tgagatgcct gagataaaaa
     4681 atcaaaaact aaaaagcgaa atactaacaa atgctagcat actagaagag atatctgcag
     4741 atataggatc aagcgctatt ttatttttta aaaagagaaa ttatctaaaa atagttcata
     4801 aagacactac tttgttactg ca
//
LOCUS       DAPPKW010000115         4797 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.115, whole genome shotgun sequence.
ACCESSION   DAPPKW010000115 DAPPKW010000000
VERSION     DAPPKW010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4797)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4797)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4797
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.115"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            126..1514
                     /gene="argH"
                     /locus_tag="RPW04_001828"
     CDS             126..1514
                     /gene="argH"
                     /locus_tag="RPW04_001828"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDX6295905.1"
                     /translation="MQKMWEGRFSESSSELLEAFNASIEFDKELYKQDIEGSIAHAKM
                     LGKCGILTTEQSQKIINGLQQVKSEIDNSEFEFKIENEDIHMAVEKRLSEIIGKELGG
                     KLHTARSRNDQVALDFKLFVQQQSVIISNLILELMVVLKDIAAEHKNTLMPGFTHLQH
                     AQPISLAYHLLAYAFMFKRDYERLICCYQRNDLSPLGSCALAGTPHPINRKMVAEELG
                     FKDITQNGMDSVSDRDFALELLFNISLIFTHTSRLCEELILWSSSEFRYITISDKFST
                     GSSIMPQKKNPDVAELIRGKTGRVYGNLISLLTVMKALPLAYNKDMQEDKECVFDSVK
                     TAINSLIILKEMLKTTTFNKDFMLKACKNGHLSATDLADYLVRNLDIPFREAHFITGK
                     CVALAEKLGKDISELSLDELKSIHQDIKSDALEVLKLENSKEARQSEGGTGNKSVDTQ
                     LNELNSFLNLKR"
     gene            1682..1915
                     /locus_tag="RPW04_001829"
     CDS             1682..1915
                     /locus_tag="RPW04_001829"
                     /inference="COORDINATES: protein motif:HMM:NF015956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HDX6295906.1"
                     /translation="MDLSKLEINQKAILTGINGLKNTKRRFRSFGLDIGSKIQIKQKS
                     ITNSNIEILSEHGLIALRENEAKMLSCELLAEK"
     gene            1912..4026
                     /gene="feoB"
                     /locus_tag="RPW04_001830"
                     /pseudo
     CDS             1912..4026
                     /gene="feoB"
                     /locus_tag="RPW04_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013459416.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
     gene            4092..4715
                     /locus_tag="RPW04_001831"
     CDS             4092..4715
                     /locus_tag="RPW04_001831"
                     /inference="COORDINATES: protein motif:HMM:NF014573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDX6295907.1"
                     /translation="MKTLLINAHPKFDEKDTFSYSLQSKFKNKFENEFDTNSLCSINL
                     YNSAIPKLDRDMLNLFQNQQNDELQTQMNSIMEQFLSSKRIVIVMPLHNFNIPARLKD
                     YMDNILIAKKTFAYTSGGSIGLMNDDRKVLVLCSSGSVYTDGGRYANLDFACQYLKAM
                     FCEIMGFNNFYIVRAEGTSMSKFSKDSILSKAYLDLDKTFAEFYKLS"
BASE COUNT         1785 a          733 c          845 g         1434 t
ORIGIN      
        1 tgactgcttt taaaaaatta actatcaaaa aatataaaac ttttgttaat gacaattttt
       61 gtataaaaaa gatatttacc gataacaata tttgttttaa atttaaaaca aaaaaaagga
      121 aacatatgca aaaaatgtgg gaaggtcgat ttagtgagag tagcagcgaa cttttagaag
      181 cttttaacgc ctcaatagaa tttgataaag agttgtataa acaagatata gagggctcaa
      241 tagctcacgc caaaatgttg ggaaaatgcg gaattttaac cacagaacaa tcgcaaaaaa
      301 ttataaacgg actgcaacaa gtaaaaagcg aaatagacaa ctctgagttt gaatttaaaa
      361 tagaaaatga agatatacat atggcagttg aaaagcgact atccgagatt ataggcaaag
      421 agcttggcgg taagcttcac acagcaagaa gtagaaacga tcaagtagct cttgatttta
      481 aactttttgt gcaacaacaa agcgttataa tttcaaattt aatattagaa ttaatggtgg
      541 ttttaaaaga tatcgctgct gagcataaaa atacgttaat gcctggtttt acacatcttc
      601 aacacgcaca accaattagc cttgcatatc atttattagc gtatgctttt atgtttaaaa
      661 gagattatga aaggttgatt tgctgctacc aaagaaacga cttaagtcca cttggatcat
      721 gcgcacttgc cggaactcct catcccataa atcgaaaaat ggtagctgaa gaactcggat
      781 ttaaagatat cacgcaaaac ggtatggata gtgttagcga tagagatttt gcgcttgaac
      841 ttctttttaa tataagcctt atatttactc atacatcaag actttgtgaa gagcttatac
      901 tatggagtag cagtgagttt agatacatta ctataagtga taaatttagt accggctcaa
      961 gcataatgcc gcaaaagaaa aatccggatg ttgccgagct tataagagga aaaacaggta
     1021 gagtatacgg caacctcatt tcacttttaa cagttatgaa agctcttccg cttgcttata
     1081 ataaagatat gcaagaagac aaagaatgcg tatttgatag tgttaaaact gcgatcaact
     1141 ctcttattat acttaaagag atgttaaaaa cgactacttt caataaagat tttatgttaa
     1201 aagcttgtaa aaacggtcac cttagcgcta ctgatttggc ggattattta gtaaggaatt
     1261 tagatatacc atttagagaa gctcatttta tcaccgggaa atgcgtggca ttagctgaaa
     1321 aacttggtaa agatataagc gagctcagct tagatgagct aaaaagtatc caccaagata
     1381 tcaaaagtga cgctttagaa gtgttaaaat tagaaaactc aaaagaagct agacaatctg
     1441 agggcggcac cggcaataaa agtgtcgata cgcaattaaa cgaactaaat tcgtttttaa
     1501 atttaaaaag atagtacata aatcgcactc gtatatgttt ggagtgcgaa atcacttttt
     1561 aaaaatttat aaaaaattat ataactacat attattatta atggtattga ttatcgataa
     1621 agctatatta agctgattta gatataattt ataaataatt tgctaattta aagaggtaaa
     1681 aatggattta tctaaattag aaataaatca aaaagctata ctcactggga taaacggact
     1741 gaaaaataca aaaagaagat ttaggtcatt tggactcgat atcggatcta agatacaaat
     1801 caaacaaaaa agcataacaa attcaaacat agagatacta agcgaacacg gtttaatagc
     1861 tttgagagag aatgaggcaa aaatgctaag ctgtgaactg ttggctgaaa aatgagccaa
     1921 cagtttatca tagctcttgt aggacaaccc aatgtaggca aaagtcagtt tttaagcgcg
     1981 attagcaaat caaatccaaa aatcggaaat ttcgcaggcg taacagtaga aaaatacgaa
     2041 gcaactctta taaaagacgg tataacttta cattttatag atcttcctgg tctttatagt
     2101 atggacgatt tttcaaaaga cgagagcgta gcaaaagatt ttttgatgaa aagcaaatac
     2161 gatatgatac taaatgtcgt agattctaca aatttagaaa gaaatctctt tttaacggca
     2221 gaacttatga ctcttggtaa aaaaatggtg atagctctca atatggatga tgaagccaaa
     2281 agcgaaggta tagatataaa tagtgaacat ttgagctcta ttttaggtat accgaccatt
     2341 aaggtatcat cggtaaaaaa gacaaatctc aaaactttac ttgatataat tattcaaact
     2401 ttaaacacgc cgtataagaa aaatagactt aaatttagtg attctataga agaagaactg
     2461 atatatctaa ccaaaataat agacgaaaca ggatttcaac aagaaggcat ctcctcaaga
     2521 caagcggcta tactattttt actagaagat aagaaattct acgcactgtc tcatgaagat
     2581 ccaaaaatgc tgtttttgat acccgagatc aaaaaagtat ttgataatat caaacaaaaa
     2641 acgcaaaaca actccataga ggacgtgctt atcgacgaat accactcgtt tgcaaaaggc
     2701 gcggcattgg aaactcaaaa tataaaagcc ggcaaaagca cggatatcac aaaaaagata
     2761 gacagcatac ttatacacag atttttcgga ctacctatat ttttattttt tatgtggcta
     2821 ctgtttcaag ccacgtttac tcttggcgaa gttccgatgc aatacataga gatgacgttt
     2881 gcttggttta gcaatagcgt atctgcaaat ttaaatgatg atatgataaa atccataata
     2941 gtagacggta tcatagccgg agtcggcaca gtgatactgt ttttaccaaa cataataatt
     3001 ttatttttag gtatagcact tttagaaaca accggatata tggcaagagt tgcgttttta
     3061 ctagatggat tttttcacaa attcggactt cacggcaaaa gtttcatacc gctagttacc
     3121 ggatttggct gttccatccc tgcatatatg gcagcgcgca ctcttaaaag tcaaaaagat
     3181 agacttctta ctatgtttat cataggattt atgagctgtg gggctagact tcctgtgtat
     3241 gtactatttg ctggagcatt ttttaaaccg gataatgcgg gaaacgtgct gtttttcata
     3301 tatatatatt aggtgctctt ttaggactga tagcagctaa agttttacgc attttcgttt
     3361 tcaaaggcaa tgatgaacca tttgttatgg aaatgccgaa atacagactt ccgagcataa
     3421 agctcatttg gctaactata tactcaaaat ccatgatgta tttaaaaaaa ggcaggtact
     3481 tttatactag cagcttctat tttggtctgg tttatcagca cttttccgca aaatccacat
     3541 atagaagaaa aataccaaca acaaattcaa acagcgtcaa gcgacgagct aaaattagag
     3601 cttactaatc aaaaagatca agagcttatg gaaaatacgt atctaggaat gtttggtaaa
     3661 actatagagc ctatatttgc accacttgga tttaactgga aaatgtctgt tgccacagta
     3721 agcgggcttg cggcaaaaga agttatagtt tctactttag gagttttata ctctttaggc
     3781 ggggaggtta gcgaaagtaa cattactttg cagcaaactt tagctaaaaa tatatcgttt
     3841 gcctcggcta tggcatttat cgtatttgtt atggtatatc tgccctgtct cgcagcaact
     3901 gccgtatttt caaaagaagc agaaagtaaa aaatatacgt tttatctagt tatatttact
     3961 tttagtgctg cttggatact cgcgtttatt acatataaag ttatcacttt tttaaatata
     4021 gcgtgattta atcatgaccc gtaaaataat ttattattta tagttaaaat aaacaatcaa
     4081 aaggacaatc aatgaaaaca ctactcataa acgctcatcc taaatttgat gagaaagata
     4141 cgttttctta ctctttgcag agtaaattta aaaataaatt tgagaatgaa tttgatacaa
     4201 actcattatg tagcataaat ttatacaata gcgcaatacc aaaacttgat agagatatgt
     4261 taaatttatt tcaaaatcaa caaaatgacg aacttcaaac acagatgaat agcataatgg
     4321 agcaattttt atcctcaaaa cgaatagtaa tagttatgcc tttgcataat tttaatatcc
     4381 cagcacgttt aaaggactat atggacaaca ttcttatcgc taaaaagacg tttgcctaca
     4441 caagcggcgg ttcgatagga ctgatgaacg atgatagaaa agttcttgtt ttatgttcta
     4501 gcggatcagt ttatacagat ggaggaagat atgcaaatct tgattttgca tgccaatacc
     4561 taaaggcgat gttttgcgag atcatgggtt ttaacaattt ttatatagtt agggctgaag
     4621 gtacgtcaat gagtaaattt agcaaagaca gtattttaag caaagcttat ttggatttag
     4681 ataagacttt tgccgaattc tataaactaa gttaaattta aaaatagtaa attttacaga
     4741 tatatctata gaaaacatga agtaattctc ataaaatata gatacagatc aaaaata
//
LOCUS       DAPPKW010000116         4753 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.116, whole genome shotgun sequence.
ACCESSION   DAPPKW010000116 DAPPKW010000000
VERSION     DAPPKW010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4753)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4753)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4753
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.116"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            257..1441
                     /locus_tag="RPW04_001832"
     CDS             257..1441
                     /locus_tag="RPW04_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009293806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDX6295908.1"
                     /translation="MKKWIAAAAVLVAIFGFWYYQNSKKPENEYLTTIVKKGNLTQSV
                     EAVGEVFAENLVDVGAQVSGQIKELYVKVGDKVKKGDKIAQIDSIKQQNTLDQQLAAL
                     EILNAKLKSAKISLNIAEIQYNRELRLAEQNATSVENLENYKNTLSLQNASLKEIEAQ
                     IKQTQIEISTARTNLNYTDIRAPFDGVVVSVPVEVGQTLNANQTTPTLVNIADLSKME
                     IRMQISEGDVPKISIGDRVEYTILSDINKKYTGSLTSIDPGLTTLSDGKYKTTSSSSG
                     SSSSSGSSAVYYYAKLKVDNSSEFLRIGMTTQNTIIIKEIKDTLLLPTMAIKSDENGN
                     FVLIKNGEEIKKVRVEVGISSSVDTQILSGLSEGDEVVTSQLGGDELKKLLNTRSPKI
                     RV"
     gene            1438..3363
                     /locus_tag="RPW04_001833"
     CDS             1438..3363
                     /locus_tag="RPW04_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HDX6295909.1"
                     /translation="MIKLENIKKSFITGGVSSEVLKGINLEIKKGEFVAIIGQSGSGK
                     STLMNILGCLDTPTSGKYLLDSLDISKFKKDELSNLRLKKFGFIFQRYNLLSSNDTKS
                     NVALPGIYAGMSKADRINRAKDILVKLGLETKFDTMPNHLSGGQQQRVSIARALMNGG
                     EILLCDEPTGALDSSSGVMVMQILDSLHKDGHTIIVVTHDKDIAAWADRIIEIKDGNI
                     ISDTRKNSQIYELKQNLKEIKPSLKAIRDQFFESFVMSLGAIKSHKLRSFLTMLGIII
                     GIASVICVVALAKGSQQKILSDINNMGTNTITIFPGKGFGDMHSGRVRSLSIDDSNLL
                     GKLDFVDFSTPRMNTSGLLTYANQSFSGSLRSGSEYSLAISGLKIEKGRDFTKDDIIN
                     SRSNIIIDQFTKDAFFKDVDPIGKVILFNKQPFTIVGLVKRDETSFSGDNLTVYAPYT
                     TTMNKLTGDRDIRSIMLKLKDGVNAQVAEQSIIEVLKIRRGSKDFFTRNSDTIRQTIE
                     STMNTMSLLISGIALISLMVGGIGVMNIMLVSVFERTKEIGIRMAIGAKSKDIMTQFL
                     IEAILLCAIGGSIGIGLAYAIGYGFNVFGGDFKMIFSTASIFIALGVSSLIGIVFGYI
                     PARNASKLNPIDALLRE"
     gene            3366..4664
                     /locus_tag="RPW04_001834"
     CDS             3366..4664
                     /locus_tag="RPW04_001834"
                     /inference="COORDINATES: protein motif:HMM:NF014385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDX6295910.1"
                     /translation="MKNIIFVLFSLIFVGCASKSLEYNVKNVNFYEPSWYKDFNQTVL
                     NNLVDLSLKNSEDINIAVLNLEIAMLKAGLIRDDFFPTPSGKFGASTNKDIKTSSGWK
                     NGFSSEFALSYEVDIYGKIFDNYEARDWEAKASQSTLENLRLTIINSVTDTYFNILYL
                     NDAIRNLKQNLENLNMLDRLVFTKYELGKEEILSVRQSRQNILDLQNQILSNIRELET
                     SYEIIKNFTRSDIKFDELSLSNVQNSDISLDIDFAILKNRPDINEAISNLNASFYDYK
                     VSEKNLYPSVSIGASLSDSDSKFSDSFGFNILGGTLNINLPFLDYSRLKKQINISEAQ
                     FKKNVLTYEKTLSNAVNEVIKYVNYYEGDKQRYENMQNIKKEREMIVAIYESKYSEGK
                     AELKDLLEAKNSLISVQNMLLNQKYRLLNDELSYYKAIAK"
BASE COUNT         1762 a          634 c          909 g         1448 t
ORIGIN      
        1 aaggaatttt ttagcgtatt taataatcat cttcaagcag atatgccaat taataaaatt
       61 tatatctttt ttcagatata aatacgcgta tcgaatataa ttacattaac agttcaaata
      121 gatattttat gttattttaa tgtattgaaa tttttataaa ataacgatat aatcgttgtt
      181 tgtgtcactt gtcttgtttt taacaatttt ttcacaaaat ttgattaaaa ttataaaaaa
      241 tatcttaagg ataataatga aaaaatggat agcagctgca gctgttttgg tggctatttt
      301 tggtttttgg tactatcaaa attccaaaaa accagaaaat gagtatctaa caactatagt
      361 aaaaaaagga aatttaaccc aaagcgtaga agccgtaggc gaggtttttg cggagaattt
      421 agtagatgtt ggagctcaag taagtggaca aataaaagaa ctttatgtaa aagttggaga
      481 taaagttaaa aaaggcgata aaatcgctca aatagactct ataaaacagc aaaatacgct
      541 agatcaacaa ttagcagctc ttgagatact aaatgctaag ctaaaatcag ctaaaatttc
      601 tttaaacata gctgaaattc agtataatcg tgaactaaga ctagcagaac aaaatgcaac
      661 atctgttgaa aatttagaaa actataaaaa tactctaagt cttcaaaacg caagtttaaa
      721 agagatagaa gcccaaataa aacagactca aatagaaata agtacggcca gaacaaattt
      781 aaactatacg gatattagag ctccgtttga tggagttgta gtttctgtgc cagtagaggt
      841 cggacaaact ttaaatgcga atcaaacaac tccgactttg gtaaatatag ccgatcttag
      901 caaaatggaa attagaatgc aaataagcga gggcgacgta cccaagataa gcataggtga
      961 tagagtagaa tacaccattc tttcggatat aaataaaaaa tatacaggat ctcttacatc
     1021 tatagatccc ggtcttacta cgctaagtga tggaaaatat aaaaccacaa gctctagttc
     1081 aggttcaagc tctagttcgg gtagttcggc agtgtattat tatgcaaaat taaaagtcga
     1141 taattcaagt gagtttttaa gaatcggtat gacgacgcaa aatactataa taataaaaga
     1201 gataaaagat actcttttac ttcctacgat ggctataaaa agtgatgaaa acggtaattt
     1261 tgttcttata aaaaacggtg aagagataaa aaaagtaaga gtagaggtgg gtattagtag
     1321 cagtgttgat actcaaattc taagcgggtt aagcgaggga gatgaagtag ttacgtctca
     1381 acttggcggc gatgaattaa aaaaactttt aaatactaga tcaccaaaga taagagtatg
     1441 ataaaactag aaaatattaa gaaaagtttt ataaccggcg gcgttagtag tgaagtttta
     1501 aaaggtataa atttagagat aaaaaaaggc gagtttgtag ccatcatagg tcaatcaggt
     1561 agcggaaaat ctacgcttat gaatatctta ggctgtcttg ataccccaac tagcggaaaa
     1621 taccttttgg actctttgga tataagcaaa tttaaaaaag acgagctttc aaatttaaga
     1681 cttaaaaaat tcggttttat atttcagcgt tataatcttc taagttcaaa cgatactaaa
     1741 agcaatgttg cgcttcctgg aatttatgca ggtatgagta aagccgatag gataaataga
     1801 gcaaaagata tcttagtaaa acttggatta gaaactaaat ttgatactat gccaaaccat
     1861 ttgagtggtg gtcagcagca acgcgttagt atagcaagag cgcttatgaa tggcggggag
     1921 atactgcttt gcgatgagcc gactggtgct cttgatagta gcagcggcgt gatggttatg
     1981 caaattttag atagtttgca caaagacggc catactatca tcgtagttac tcacgataaa
     2041 gatatagctg cttgggcaga taggattatc gagataaaag acggaaatat cataagcgat
     2101 actagaaaaa atagtcaaat ttatgaactg aaacaaaatt taaaagagat aaaacctagt
     2161 ttaaaagcta taagagatca gttttttgag agttttgtta tgtcgctcgg cgctataaaa
     2221 tcgcataaat taagatcgtt tcttaccatg ctcggtatca tcatcggtat agcttctgtt
     2281 atttgtgttg tagctcttgc taaaggtagt cagcaaaaaa tcctatctga tatcaataat
     2341 atgggcacaa atacgattac tatatttccc ggaaaaggtt ttggcgatat gcactcaggt
     2401 agagttcgca gtcttagcat cgatgattca aatttattgg gaaagcttga ttttgttgat
     2461 ttttcaactc ctagaatgaa cactagtgga cttttgacct atgcaaatca gagttttagc
     2521 ggtagtctta gaagcggaag cgagtactct ttggcgatat ccggacttaa gatagaaaag
     2581 ggtagagatt ttacaaaaga cgatattata aactcaagat caaatatcat aatagatcaa
     2641 tttacaaaag atgcattttt taaagatgta gatcctatcg gaaaagtaat tttatttaac
     2701 aaacaaccat ttacgatagt aggcttagta aaacgagatg agacttcttt tagcggcgat
     2761 aacttaactg tatatgctcc atatactaca accatgaata aattaacagg cgatagagat
     2821 ataagatcta ttatgttaaa actaaaagat ggagtaaatg ctcaagtggc tgagcaaagt
     2881 ataatcgaag ttttgaaaat taggcgcgga agtaaggatt tttttactag aaactcagat
     2941 actatcagac aaaccataga aagtacgatg aatacgatga gtcttttgat atctggaatc
     3001 gcgcttatat ctttgatggt cggcggaata ggtgttatga atatcatgtt agttagcgta
     3061 tttgagcgta caaaagagat aggtataaga atggcgatag gcgcaaaaag caaagatata
     3121 atgactcaat ttttgataga agcgatactg ctttgtgcta ttggcggaag tataggaata
     3181 gggcttgcat atgcgattgg ttacggattt aacgtatttg gcggagattt taagatgata
     3241 tttagcacgg cttctatatt tatagcgctt ggagtttcga gcttgatagg catagttttt
     3301 ggctatatac ctgctagaaa cgcatctaag ctaaatccta tagatgcgct tttaagggag
     3361 taaatttgaa aaatataata tttgttttat ttagcttgat ttttgtcgga tgtgcttcta
     3421 aatctctgga gtataatgta aaaaacgtaa atttttatga gccttcatgg tataaagatt
     3481 ttaatcaaac agtgctaaat aatttagtag atttgagttt aaaaaatagc gaagatataa
     3541 atatcgctgt tttaaattta gagatcgcca tgttaaaagc agggcttatc agagacgatt
     3601 ttttcccgac tccctcaggt aaatttggag catcgactaa taaagatatc aaaacatcta
     3661 gcggttggaa aaacggtttt tctagtgagt ttgctcttag ctatgaagta gatatttacg
     3721 gtaaaatttt tgataattac gaagctagag actgggaagc taaagctagt caaagtacgc
     3781 ttgaaaatct gcgtctaacg ataataaata gcgtgaccga tacgtatttt aatatacttt
     3841 atctaaatga cgctataaga aatttaaaac aaaacttaga gaatttaaat atgcttgata
     3901 ggcttgtttt tactaagtat gaattaggca aagaggaaat tttaagcgta aggcagagca
     3961 gacaaaatat acttgatctg caaaatcaaa ttttatcaaa tatcagagag ctagaaacta
     4021 gctatgaaat cattaaaaac tttactagaa gcgatattaa atttgatgaa ttaagccttt
     4081 caaacgtcca aaatagcgac ataagccttg atatagattt tgcgatatta aaaaatagac
     4141 cagatataaa tgaggctatt tcaaatttaa acgctagttt ttacgactat aaagttagtg
     4201 aaaaaaatct ctatccgagt gttagcatag gtgctagttt aagtgatagt gactcaaaat
     4261 ttagtgatag ttttggattt aatattttag gcggtacttt aaatatcaat ttaccttttc
     4321 ttgattattc acggttaaaa aagcagataa atatatctga agcgcagttt aaaaaaaatg
     4381 ttttaacata tgaaaaaact ctttcaaatg ctgtaaatga ggtgataaaa tatgtaaatt
     4441 attatgaggg cgataaacaa agatatgaaa atatgcaaaa tatcaaaaaa gaacgcgaaa
     4501 tgatagtagc gatctatgaa agtaaataca gcgagggcaa agctgagtta aaagatcttt
     4561 tggaggccaa aaactctctt attagcgtac aaaatatgct tttaaatcaa aaatatcgtc
     4621 ttttaaatga tgagttgagt tattataaag ctatagcaaa atagatgaat ttatttcaaa
     4681 ccaaaatgca gattgctact gtgattggcc tttgcatttt gatttttgga gtaaatttaa
     4741 tgcttgagta ttt
//
LOCUS       DAPPKW010000117         4707 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.117, whole genome shotgun sequence.
ACCESSION   DAPPKW010000117 DAPPKW010000000
VERSION     DAPPKW010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4707
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.117"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..803
                     /locus_tag="RPW04_001835"
     CDS             <1..803
                     /locus_tag="RPW04_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HDX6295911.1"
                     /translation="FITVGMQINFEIIFENLLMIIVILVDVMVIKIAVVYALLATYLK
                     KRVAIKTALSICQIGEFALAIFALLNVNNMLNSETSQILTAVVIISMVATPLILKNIG
                     HLADRLEEESEIPEFEKLKVQDLSDHFIVCGYGRLGQEVVNRLKAQGLLYLVIESDIS
                     LVQLGRSRGENVFFGNATQKITLEKASIKTCAAIILTVSNEQKLEMIANSIKDLDYPV
                     NTVIRFTGTEEKQLYADFGENFHLIKEERAVARVLIHEALQCKIDRNI"
     gene            816..2252
                     /locus_tag="RPW04_001836"
     CDS             816..2252
                     /locus_tag="RPW04_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HDX6295912.1"
                     /translation="MDQTLILFGMLFLFSVIFSKISDKYGIPALLMFLGIGMLAGSDG
                     IIGLEFDNAKIAEDVGTIALVYILFAGGFNTSYKSIKPIFKTGFILATLGVVISAVIT
                     GLFAYYIMQFSILESLLFGAIISSTDAAAVFSIMRSTKFKNNLSSLLEFESGSNDPMA
                     IFLTITILSLITAASIPDKFILGLGLLLEFVLGGVMGYLFGVMIPSLINKIKLGYWGL
                     YPVLLISLIAILFGLTENIGGNGFIAVYTAGIFANKKEFLYKKNLIGFFDGIAWMMQI
                     FVFLTLGLLVFPSELPNVAFISIIMAFVVMFIARPISVFISTIFSKYTTKEKLFISWV
                     GLRGVVPIILATYPLSSNTPNAQLIFNVIFFMVLISVLTQGTTLNKSAKIFGVIETPK
                     IIASNFPNTPISHNDLKQYTIGKNSKIIGKNLSELELPDDFLILLAKRNSEYVKVGGS
                     FEFMENDMLLILCNNEIRYQKVLKIYDF"
     gene            2312..2884
                     /locus_tag="RPW04_001837"
     CDS             2312..2884
                     /locus_tag="RPW04_001837"
                     /inference="COORDINATES: protein motif:HMM:NF016176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HDX6295913.1"
                     /translation="MKKPMLIISAAALLANLAFALEIDTNLAKIDITAFKTANKTAVP
                     STFNDVKFSFPKSSGSVSEILTGATASIDLNSIDTFKNPIRDKNIKEKFFSHLASQNV
                     ESKITSVSGDDNVGEVKMSVKFNNVEKEIPMKYEVKDSKLIASGEIDFNSDFNAKDAF
                     EKFSTDKIIAGLHSKKTWTNIIVGFEVPVK"
     gene            2957..3730
                     /locus_tag="RPW04_001838"
     CDS             2957..3730
                     /locus_tag="RPW04_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HDX6295914.1"
                     /translation="MEFELWHYALLFFVACFSGFVDAIAGGGGLITIPILISVGIPEH
                     IALATNKLQSSFGSFTATLNFSLKGYINYKDIWIGVVFTFIGAVLGTICVLVIDPKIL
                     SYLIPIFLILIFLYTIFSPKIGEKDRAAKLSPKVFYITFGLMLGFYDGFFGPGAGSFW
                     MFAMVALLGIHMKKAVAHTKALNFTSNIVSLGVFIAGGQILWMLGIIMGFGQIIGAYF
                     GSKMVIKKEVKFIKIVFLVVVACTILKLIYDLFVKQLLT"
     gene            3784..4464
                     /locus_tag="RPW04_001839"
     CDS             3784..4464
                     /locus_tag="RPW04_001839"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDX6295915.1"
                     /translation="MKELFLFSDMIMHSHTFNYLFHLILVAIIVLIVAKLATRSMQLV
                     PRGSQNLLEAYLEGIVSMGRDVMGSDELARKYLPLVATIGLIVLTSNVIGIIPGFEAP
                     SSSLNLTLCLALSVFLYYNFEGIRTQGIIKYFAHFMGPNKILAPLMFPIEIVSHLSRI
                     VSLSFRLFGNIKGDDLFLMVVLSLAPWVAPLPAFALLTFMALLQTFIFMILTYVYLAG
                     AVVVSEEH"
BASE COUNT         1492 a          635 c          854 g         1726 t
ORIGIN      
        1 tttttataac tgtaggaatg cagataaact ttgagataat atttgaaaat ttattaatga
       61 taatagtgat tttggtcgat gttatggtga tcaaaatagc tgttgtatat gcacttttag
      121 caacttatct taaaaaaaga gtagccataa aaacagctct tagtatatgt cagattggcg
      181 agttcgcttt agctattttt gctcttttaa acgtaaataa tatgttaaat tcagaaactt
      241 ctcaaatttt aaccgcggtt gtaattatat ctatggtagc tactccgttg atcttaaaaa
      301 acatcggaca tttagccgac agactagaag aagagagcga aatacctgag tttgaaaagc
      361 taaaagtaca agatttaagc gatcatttta tagtttgcgg ctatggaaga ctcggtcaag
      421 aagttgtaaa tagactgaaa gctcaaggat tgttatatct tgttatagag agtgatataa
      481 gcttggttca gcttggaaga agccgcggag aaaatgtatt ttttggtaat gcaactcaaa
      541 aaattacact agaaaaagca tctataaaaa catgtgcggc tataatttta actgtgagca
      601 atgaacaaaa gttagagatg atagcaaact ctataaaaga tcttgattat cctgtcaata
      661 ccgttattag atttacgggg accgaagaga agcaattata tgctgatttt ggagagaatt
      721 tccaccttat aaaagaagaa agagcagttg ctagagtgct tatacatgaa gctttacagt
      781 gtaaaataga tagaaatata taataaagga ttaacttgga tcagacatta atactttttg
      841 gaatgttgtt tttatttagc gttatattta gtaaaatttc cgataaatat ggtattcctg
      901 cgcttttaat gtttcttggt atcggtatgc ttgctgggag cgatggtata atcggactag
      961 agtttgataa tgcaaagata gcagaagatg taggaacgat agctcttgtt tatattcttt
     1021 ttgcgggtgg atttaatact agttataaat ccataaaacc gatttttaaa acaggtttta
     1081 tactagctac tttaggagtc gttatttcag cagtgattac tggattattt gcttattata
     1141 taatgcaatt ttccatttta gaatctttac ttttcggtgc tataataagt tcaactgatg
     1201 cagctgctgt attttctata atgcgttcta ctaaatttaa aaataatcta tcttcgcttt
     1261 tagagtttga aagcggaagc aatgatccta tggcgatatt tttaactatt acgattttaa
     1321 gccttataac agctgctagc ataccagata aatttatttt aggtttaggg cttttgcttg
     1381 aatttgtttt gggcggagtt atgggatatc tatttggcgt tatgatacca agtcttatta
     1441 ataaaataaa actcggctac tggggattgt atccggtttt acttatatct ttgatagcta
     1501 ttttgtttgg attaacggaa aatatcggcg gaaatggctt tatagctgtt tatacggctg
     1561 gaatttttgc aaataaaaag gagtttttat ataagaaaaa tttgattgga ttttttgatg
     1621 gtattgcatg gatgatgcag atattcgtat ttttaacttt gggacttttg gtgtttccaa
     1681 gtgagcttcc aaatgtagct tttataagca ttataatggc ttttgtggtt atgtttatcg
     1741 ctagacccat tagtgtgttt atctcaacta ttttttcaaa atatactaca aaagagaagc
     1801 ttttcatatc atgggtcggt cttagaggcg tcgtgccgat catacttgct acatatcctc
     1861 tatcgtcaaa tactccaaat gctcagctga tatttaatgt gatatttttt atggttttaa
     1921 tatcggtttt aactcaagga actactttga ataagagcgc aaagattttt ggtgtcatag
     1981 aaactccaaa aattatcgca tcaaattttc caaatactcc aatttcacat aatgatttaa
     2041 aacaatacac aataggaaaa aattcaaaaa tcataggaaa gaacttatct gaattagaac
     2101 ttccagatga ctttttaata cttttagcta agcgaaactc agagtatgta aaagtaggcg
     2161 gatcttttga atttatggag aacgatatgc ttttgatatt atgcaataat gaaattagat
     2221 atcaaaaagt actaaaaatt tatgattttt aaccttattt taagcaaatt tatttgataa
     2281 taaaaactaa tttttaaaat aaggagacaa aatgaaaaaa cctatgttaa taattagtgc
     2341 ggctgcgctt cttgcaaatt tagcttttgc gcttgagata gatacaaatt tagctaagat
     2401 tgatataact gcatttaaaa cagccaataa aacagccgtt ccttctactt ttaacgatgt
     2461 aaaatttagt tttccaaaaa gtagtggaag cgtatctgag atacttactg gagctactgc
     2521 aagtatagat ttaaacagta ttgatacttt caaaaatcca ataagagata aaaatataaa
     2581 agagaaattt ttctctcatt tagcatctca aaatgttgaa tctaaaatca cctcagtaag
     2641 cggcgatgat aatgtaggcg aagttaaaat gagtgttaaa tttaataatg tagaaaaaga
     2701 aattcctatg aaatacgagg ttaaagattc taaacttata gcatctggag agatcgattt
     2761 taatagcgat ttcaacgcaa aagacgcatt tgagaagttt agtaccgata aaattatagc
     2821 cggtttgcac tctaaaaaaa catggacaaa tataatcgta ggatttgaag ttccggttaa
     2881 ataacatcat atcggcattt aattagtaat aaagtttgaa tgctgtaata ttccgaattt
     2941 aaaataaagg cttattatgg aattcgaact ttggcactat gcgctactct tttttgtagc
     3001 atgttttagc ggttttgtgg atgccatagc tggaggtgga gggctgatca ctataccgat
     3061 tctcatatca gtaggcatcc cagaacatat agctttagct accaataaac tccaatctag
     3121 cttcggaagt ttcactgcta ctttaaattt tagtttaaaa ggttatataa attataaaga
     3181 tatttggata ggagttgttt ttacttttat aggtgctgtt ttaggcacga tttgcgtatt
     3241 agtcatagat ccgaaaattc ttagttatct tatacctata tttttgattt taatattttt
     3301 atatactatt tttagtccaa agatcggcga gaaagataga gctgcaaagc taagccctaa
     3361 ggttttttat ataacttttg gcttgatgct tggattttat gatggatttt ttggacccgg
     3421 agccggatct ttttggatgt tcgctatggt tgcgctgctt ggaattcata tgaaaaaagc
     3481 agtcgctcat acaaaagctc taaattttac ctcaaatata gtatctttgg gagtttttat
     3541 agccggcgga cagattcttt ggatgcttgg tataatcatg ggatttggtc aaattatagg
     3601 tgcatatttt ggatcaaaaa tggttattaa aaaagaggtt aaatttataa aaatagtatt
     3661 tttagtagtt gtagcttgta ctattttaaa gctaatttat gatctttttg taaaacagct
     3721 tttaacttga atttaatata aatttagcta taatcgcaag aaaattttaa ataaggttgt
     3781 ttaatgaagg aactatttct cttttcagat atgattatgc atagccatac ttttaactat
     3841 ctttttcatc ttattttagt cgctattatc gttcttatag tagcaaaact tgctacaagg
     3901 tctatgcagc ttgtccctag aggatcgcaa aatcttttgg aggcttattt ggaaggtata
     3961 gtatcaatgg gacgcgacgt aatgggtagt gatgaattag ctaggaaata tcttccgctt
     4021 gttgctacaa taggtctgat tgttcttact agtaacgtga ttggtattat tccgggattc
     4081 gaggctccta gttctagttt aaatttaacc ttatgtctgg ctcttagcgt atttttgtat
     4141 tataattttg aaggtatcag aactcaagga attataaaat attttgctca ctttatggga
     4201 ccaaataaaa ttttagctcc gcttatgttt cctatagaga tagtttctca tctttcacgc
     4261 attgtttcat tgtcatttcg tctttttgga aatatcaagg gtgatgatct atttttaatg
     4321 gttgtactta gccttgctcc atgggtggct ccgcttcctg cattcgctct tcttactttt
     4381 atggcacttc ttcaaacatt tatttttatg attttaactt atgtttattt agcaggcgct
     4441 gttgttgtta gtgaggagca ttaaggattt gatatctttt attagatatt ttttacattt
     4501 tctacttgga gcgtcttggg ctatagcggt tcttggtgct ctttattcat tttttaattt
     4561 tcatcatata ggttatattt tatctttatt ttacggaggg ctttttggta ttattttagc
     4621 tctgtttttt tatattttga tagcattatt tgaagcaaat gttaagttac gcaataacag
     4681 atcctaaatt atattcaaat ttaaaag
//
LOCUS       DAPPKW010000118         4552 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.118, whole genome shotgun sequence.
ACCESSION   DAPPKW010000118 DAPPKW010000000
VERSION     DAPPKW010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4552
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.118"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..1113
                     /locus_tag="RPW04_001840"
     CDS             <1..1113
                     /locus_tag="RPW04_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6295916.1"
                     /translation="KEAFLKKKYHKELVANDNISFSLKEGESLGIIGLNGAGKSTLLK
                     QIAGVLEPSSGEIIKFSKVAAILELGTGFDPELSGRENIYFNGFLLGMQKDHIDKIYN
                     EIVDFSELINFINMPIKSYSSGMIVRLAFSIAVFSDAKIFIIDEALSVGDAHFSQKCI
                     TKLNEIKQNGTSIIFVSHDLAALKLLCQRIILLKEGKLIGDGEASAILQEYNYLISKQ
                     SEQNSEYENGYGDKSAEVLEAYILKNDKPSKVFFSGDEATICIKIKANKDLNDLVVGF
                     LIKDKFSQDIFGTNSNIINHPIAVKKDKIYLISYILNLNIGNAFYTMSLALHQSNTHI
                     DICHHWLDNYLSFQVISDPTFIGISKLYPTIQIKEI"
     gene            1113..1298
                     /locus_tag="RPW04_001841"
     CDS             1113..1298
                     /locus_tag="RPW04_001841"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295917.1"
                     /translation="MEFKEFNINSPIIAHIKNLESQIKDKDKEIDDLKNRLEQIKNIP
                     IIKFLIFIRNILKNLKK"
     gene            1301..3532
                     /locus_tag="RPW04_001842"
     CDS             1301..3532
                     /locus_tag="RPW04_001842"
                     /inference="COORDINATES: protein motif:HMM:NF025072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDX6295918.1"
                     /translation="MELAYFSPLPDDRSGISAYSVELLRYLELFYNITLIYDNLDKVN
                     ESIKNRYKIISLDEFSPKNFDRLLYNMGNNIEFHANIYKTAIKNPGIVILHDFFLSGF
                     MSNYHKIDPNFNIQDEIFYSHSYKGLTEFFLNSYDEFAKHYPINRRIIENSYGIITHT
                     EKSLELAELYYQNRDFLTHIPHLRASIIPDKQTAKKILSLQDKTIFCVFGLIGPNKMH
                     KEILYAWNESLKNDQNAVLIYASGTTNNEYFLNLKDFVKTNSIENIIFTNWLDNNEYH
                     IYQSACDVSIQLRASDNGEASGALLDCFNYESLVISNYSNFKDYTLYIDNICELKLAL
                     KTCLNNNQNIVKNAKNLIITKHNPLSCASRIRDLIEKSYKNSNKLNVHKSRVLLDISA
                     IAREDLKTGIARVVLQELNAILKISHMLVEPIYFDQRDEKKGYFYAGDFITSRHGIPF
                     KNDTSTEVDIRDGDIFYGIDFPIFYKFPLFESAIYEAYKIGFFNKLKSKKTKIYFKIH
                     DILPITSPQFFPYHACELHLQWIETIRKIDPVLIATSQKTKNDLEKYGFNKIKIIPLG
                     SNFTELKVRHIKFKNRTFLAVGTIEERKAQKAIVNTFLRLQNEGIEADLIIVGKLGRV
                     DEDFKEFLCKKHKNIKYLKFVSDRFLCSLYSSTEAIIAASYDEGYGLPMVEASYYGAC
                     IIARDIPVFRDILGENATYFKDDISLYETIKNYKSKKTNRQIGITWEYTAREILKLIK
                     EDL"
     gene            3529..>4552
                     /locus_tag="RPW04_001843"
     CDS             3529..>4552
                     /locus_tag="RPW04_001843"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012744.1,HMM:NF024831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDX6295919.1"
                     /translation="MINILIDTRPLASNLTGVGRYTYEIAKNLNKNEFKPTYDYGFLT
                     DELIVGDLNQQKNKPSIKSHLINIAKRILDKTPTIKKVVKKMLIKNSLREVKSINIDL
                     YFQPNFIPLEFKAKVTVTTIHDLAFMSYPEFHPKERIDYFEQNFIPNLSKTDHFITVS
                     NAIKHEIIKKLNISADKISVIYNGYDENIFKPKNKQTINILKDRLELNNPFILFVGSI
                     EPRKNLTTLIQAYNELNLNNIDLVIVGAKGWENSEIHSLIQNNEHIKFLGFTPDDDLA
                     TLYSSATIFVYPSIYEGFGIPPLEAIACGAPILLSDIEVFREIYGNVAEFFSPLNAKE
                     LAEKLKN"
BASE COUNT         1838 a          647 c          684 g         1383 t
ORIGIN      
        1 aaagaggcat ttttaaagaa aaaatatcat aaagaactgg tagcaaacga caatatatct
       61 tttagtttaa aagaagggga aagtctaggt ataattggct taaacggcgc tggtaaaagt
      121 actcttttaa agcaaatagc aggcgtatta gagccatcta gcggagagat aataaaattt
      181 agtaaagtag ctgctatttt agagttagga acaggctttg atccagagtt aagcggcaga
      241 gaaaatatat attttaatgg ttttttactc ggtatgcaaa aagatcatat agataaaatt
      301 tataatgaga ttgtagattt tagcgaattg ataaatttta taaatatgcc aattaaatca
      361 tactcgtctg gcatgatcgt aaggctagca tttagcatag ccgtatttag cgatgctaag
      421 atttttatta tagatgaagc cttatctgta ggagatgcgc atttttctca aaaatgtata
      481 acaaaactaa atgagataaa acagaacggt acaagtataa tatttgtttc ccatgatcta
      541 gctgcgttaa aactgctttg ccaaaggata attttactaa aagaaggtaa acttattggt
      601 gatggagaag cttctgctat attacaagaa tacaactacc ttatatcgaa acaaagcgaa
      661 caaaacagtg agtatgaaaa cggatatgga gacaaatcag cagaagtttt agaagcatac
      721 atattaaaaa acgataagcc atcaaaagta ttttttagcg gcgatgaagc tactatatgt
      781 ataaaaataa aagcaaacaa agacttaaat gatttagtag taggttttct tataaaagat
      841 aaattttctc aagatatatt tggcacaaac tcaaacataa taaatcaccc tattgcagtg
      901 aaaaaggata aaatatattt aatatcatac atattaaatt taaacatagg aaacgcattt
      961 tacacaatgt cgctagcact acatcagagc aatactcata tagatatttg tcatcactgg
     1021 ttagataact atttaagttt tcaagttatc tcagatccaa catttatagg catatcaaaa
     1081 ttatatccaa caatacaaat taaggaaata taatggagtt taaagagttt aatatcaact
     1141 cgccgatcat tgcgcatata aaaaatttag aatcccaaat aaaagataaa gataaagaga
     1201 tagatgatct taaaaataga ttagagcaga ttaaaaacat tcctattatt aaatttctca
     1261 tatttataag aaatatacta aaaaatttaa agaaatagat atggagttag catatttttc
     1321 acctcttcca gatgatagat ctggcatatc tgcttattcg gttgaattat tgagatattt
     1381 agagctattt tataacatta ctttaattta tgataatcta gacaaagtaa atgagtctat
     1441 taaaaataga tacaaaataa taagcttaga tgagtttagt cctaaaaatt ttgatcgctt
     1501 gctttataat atgggaaata atatcgaatt ccacgcaaac atatacaaaa ctgcgataaa
     1561 aaatccgggt atagtcatac ttcatgattt ttttctttcg ggatttatgt caaattatca
     1621 taaaatagac ccgaatttca atatccaaga tgagattttc tactcacaca gttacaaagg
     1681 cttaactgaa tttttcttaa attcgtatga tgagtttgcg aaacattatc ctataaatag
     1741 gcgaattata gagaattcat acggtattat cacacatacg gaaaaaagtc tagaattagc
     1801 agagctttac taccaaaaca gagatttttt aactcatatt ccacatctta gagctagcat
     1861 aattcctgat aaacaaacag caaagaaaat tttaagctta caggataaaa ctatattttg
     1921 cgtatttggt cttatagggc caaacaaaat gcataaagaa attctatatg cttggaatga
     1981 gagtttaaaa aatgaccaaa acgctgtttt gatatacgcc agcggtacta caaacaatga
     2041 atattttttg aatttaaaag attttgtcaa gacaaatagc atagaaaaca ttatatttac
     2101 aaattggcta gataacaatg aatatcatat atatcaaagt gcttgcgatg tatctatcca
     2161 gctaagagct agcgataacg gagaagctag cggcgcgctt cttgactgtt ttaactacga
     2221 aagccttgtc atatcaaact actcgaattt taaagattac actctatata tagataatat
     2281 ttgtgaactt aaacttgctc ttaaaacttg cttaaacaat aatcaaaata tagtaaaaaa
     2341 tgctaaaaat ttaatcatta caaaacacaa cccattatct tgcgcctcac gaataagaga
     2401 tctaatagaa aaaagttata aaaattccaa caagcttaat gtacataaat ctcgagtttt
     2461 attagatatc tctgctatag caagggagga tttaaaaaca ggtatcgcaa gagttgtttt
     2521 acaagagtta aatgctatac tgaagatatc tcatatgcta gttgagccga tatattttga
     2581 tcaaagagat gaaaaaaaag gatattttta cgctggagac tttatcactt cacgccacgg
     2641 cattccattt aaaaatgata caagtacgga agtagatata agagacgggg atatatttta
     2701 cggaattgat tttccaatct tttataaatt tccactattt gaatcagcca tatacgaagc
     2761 atataaaata ggctttttta ataaactcaa atccaaaaaa acaaaaatat actttaaaat
     2821 tcacgatatc ttacctataa cgtcacctca gttttttcca tatcatgctt gtgaattaca
     2881 cctacagtgg atagaaacca taagaaaaat agaccctgtt ctcatagcaa ctagccaaaa
     2941 aacaaaaaat gatcttgaaa aatacggttt taataagata aaaattatac cgcttggttc
     3001 aaatttcact gaactaaaag tacgtcatat taaatttaaa aatagaactt ttctagcagt
     3061 aggaactata gaagaacgaa aagctcaaaa agctattgta aatacatttt taagattgca
     3121 aaatgaaggt atagaagcgg atttgatcat agtgggaaaa ttaggacggg tagatgagga
     3181 ttttaaagag tttttatgca aaaaacataa aaatatcaaa tacttaaaat ttgtaagtga
     3241 tagattttta tgctctttat atagcagcac agaagctatc atagcagcta gttacgatga
     3301 aggctatggg cttcctatgg tagaagcatc atattatgga gcgtgtatca tagcaagaga
     3361 catacctgtt tttcgagata ttttaggtga aaatgctaca tattttaaag atgatatatc
     3421 cctttatgaa actataaaaa actataagtc aaaaaagaca aatagacaaa ttggcattac
     3481 gtgggaatat acagcaagag aaattttaaa attgataaaa gaggatttat gataaatata
     3541 cttatagata caagaccact agcatcaaat cttactggag tgggcagata tacatatgaa
     3601 atagcaaaaa atctaaataa aaatgaattt aaaccaacat atgattatgg atttttaaca
     3661 gatgagctta ttgttggaga tttaaatcaa caaaaaaaca aaccaagcat caagtcacat
     3721 ttgataaata tagcaaaacg cattttagac aaaactccta ctattaaaaa agtagtcaaa
     3781 aaaatgttaa ttaaaaattc actaagagaa gtaaaaagta taaatataga tctatacttc
     3841 caaccaaatt ttattccact tgaatttaaa gccaaagtta cagtcactac aattcacgac
     3901 ttagcattta tgagttatcc tgaatttcat ccaaaagaac gcatagatta ctttgaacaa
     3961 aattttatac ccaatttaag taaaacagac cattttatca cagtttcaaa tgcaataaaa
     4021 catgaaatta taaaaaagct aaatatctca gccgataaaa tatcggttat ttataatgga
     4081 tatgatgaaa atatatttaa acccaaaaac aaacaaacca taaatatttt aaaagataga
     4141 ttagaattaa ataatccgtt tatattattt gtaggatcta tagagccacg caaaaatctt
     4201 acgactctca tacaagcgta caatgaacta aatttaaata atatcgatct agttatagtt
     4261 ggagcaaaag gttgggaaaa ctcagaaata cactcactga tccaaaataa tgaacacata
     4321 aaatttttag gattcactcc agatgatgat ttagcaactc tttactcatc agcaactatt
     4381 tttgtgtatc catctattta tgaaggattt ggcataccgc ctttagaagc catagcatgt
     4441 ggagctccta ttttgttatc agatattgaa gtttttagag aaatttatgg aaatgtagct
     4501 gaatttttca gccctttaaa tgcaaaagaa ctggcagaaa aattaaaaaa tc
//
LOCUS       DAPPKW010000119         4461 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.119, whole genome shotgun sequence.
ACCESSION   DAPPKW010000119 DAPPKW010000000
VERSION     DAPPKW010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4461
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.119"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            440..1156
                     /locus_tag="RPW04_001844"
     CDS             440..1156
                     /locus_tag="RPW04_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasminogen-binding N-terminal domain-containing
                     protein"
                     /protein_id="HDX6295920.1"
                     /translation="MKKIAIMLLLLCSFVFGAEFNMKTNYSLLLNVHDGIGEITDSPD
                     IVVNSSGVVMHKFKDGSKSIIARAVVTEKKDGFAKVRFEVFDSLKQQALPIPKILPSA
                     GDEIVLNFLYDRSLIVVPNKEIYKEITDNFKNITFIHPDIVGAYLNYEYKPNPSRDDF
                     RKMCAQSAAGLIFVALDNEAVFADCGSFAVLKKFKSGSVDYYQLPFYTRVKGIDTIFW
                     KLDGAKINNYDEYYKRLLGN"
     gene            1158..2537
                     /locus_tag="RPW04_001845"
     CDS             1158..2537
                     /locus_tag="RPW04_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009495169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDX6295921.1"
                     /translation="MDAKHIKYFEKLLGEDNAKFDKAHQIAYCYDATKKRFEPDGVLF
                     PRDETDVSNILQYCNENKIVIVPRGAGSGFTGGALAASGGVVLSFEKHMNKILEIDMQ
                     NMVAVVEPGLINMKLQKAVEEVGLFYPPDPASENYSTIGGNVSENAGGMRAAKYGITK
                     DYVMALRAVLPNGDIIRAGKRTIKDVAGYNIAGILIASEGSLAVITQITLKLIAKPKF
                     KKTAMGVFPNVNAAMNAVYKTMAAGVTPVAMEFLDNLSIKAVETKFKKGLPISAGAIL
                     ISDVDGSNLDVLDSELEIIKNVFEQNGATEFRVAKDENESADIWLARRNCSQAITCYG
                     SLKLNEDITVPRSELPNLLEKIAEISQKYGVTTPCFGHTGDGNVHTNVMVDRDDPDAV
                     KRGHEAITEIFKATVELGGTLSGEHGIGLSKAPFMGLAFSSEEMNLFRTIKKAFDPNN
                     ILNPNKMGL"
     gene            2547..3347
                     /locus_tag="RPW04_001846"
     CDS             2547..3347
                     /locus_tag="RPW04_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HDX6295922.1"
                     /translation="MRKIWEKLVLIYKVLEDKQLLHFAASLSFHTLLSIIPVLFISLS
                     IFTQLPSFSGYYAKIKDFIFSNLLPSQSITEYIDQFLSNSSSLGIIGLIAVFFTSIMF
                     FSDYEFVISKLTGAKSRGFWRSLSNYWTLITLMPLGLGMSFWLSNLIQTMLSQSEYTS
                     GINFLAIFPYIIIWAIFAVTYLISINRDFSIKNILISSFASSLAWSISKWIFVGYSFY
                     NKTYSSIYGSFSILLFFFIWIYISWIIFLYGIKLCVALDGLSRDKPVI"
     gene            complement(3353..4264)
                     /gene="hemC"
                     /locus_tag="RPW04_001847"
     CDS             complement(3353..4264)
                     /gene="hemC"
                     /locus_tag="RPW04_001847"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDX6295923.1"
                     /translation="MNIKIASRNSALALWQTHHIRDLLIAQGHSVEIITMKTKGDVIL
                     DTPLAKIGGKGLFTKELENSMLEGSADIAVHSLKDVPTTFPDGLKLACVCSREDVRDA
                     MLSMKYKNLDELPQGAKVGTTSLRRKMQILAHRADLDIISLRGNVNSRIAKLKNGEFD
                     AIILAMAGINRLNLSKEVKFTSAIDTIPAMGQGALGIEAIDKKEILDAIEFLNDEKSI
                     VETTIERDFVHTLNGGCQAPIGINAKLKGDKIEVEAILGLVDGSEILRDSKTYPKLAY
                     KIAGKNFADEFIARGAKELLKRAEEMV"
     gene            complement(4277..>4461)
                     /locus_tag="RPW04_001848"
     CDS             complement(4277..>4461)
                     /locus_tag="RPW04_001848"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295924.1"
                     /translation="AFGGMLLIVPGTLSDIFAVFIIVISLILKIFVRFSTNTYNDNDR
                     FRDDIIDVEIIDENKR"
BASE COUNT         1482 a          775 c          731 g         1473 t
ORIGIN      
        1 ttttgatatc taatgttatc aacacctttt tattatattt atatgcagtt tcaaaaactt
       61 ttttaatctg caagctgttt aattatgcta aagttactta atttaaaaaa atctatttgt
      121 aattttatac tcaatattat tatacgattg tcaataaatc catctttatt tgcaaaagca
      181 gataaaatag cttcattgtt ttcgcataaa ttttatagat cctaatatac ttaaacatat
      241 ttttcgttgc attattatct atagctttca tttatttcct tattattttt tgatatattt
      301 atcttaaaaa tttaagatta taattcatta tccaaaaaat acggatctaa aagttttatc
      361 tccaaaactt ctcgtttgca aaaattcaaa aaaaattagc tataatgatt ttaaattttt
      421 gcccatatag gagatacttt tgaaaaaaat tgcaattatg cttttattac tatgcagttt
      481 tgtttttggt gctgagttta atatgaaaac caactatagt ctgcttttaa acgttcatga
      541 tggtatcggc gagataacag atagtccaga tatcgttgtc aatagtagcg gcgttgttat
      601 gcataaattc aaagatggca gcaaatcaat aattgctaga gcagtagtca ccgaaaaaaa
      661 agacggtttt gctaaagtta ggtttgaagt atttgactct ttaaaacagc aagcacttcc
      721 gataccaaag attttaccgt ctgcaggaga tgaaatagtc ttaaatttct tatatgacag
      781 atctctaata gtagttccaa ataaagaaat ttacaaagag ataacagaca actttaaaaa
      841 tatcactttt atacatccag acattgtagg agcatatcta aactacgaat acaaaccaaa
      901 tccaagcaga gacgactttc gtaaaatgtg cgctcaaagt gcggcagggc ttatatttgt
      961 agcattagat aacgaagccg tgtttgctga ttgcggtagt tttgccgtgc ttaaaaagtt
     1021 caaaagcgga agtgtggatt attaccagct tccattttat acaagagtta aaggcataga
     1081 tactatattt tggaaacttg atggcgcaaa aataaacaac tatgacgaat actataaaag
     1141 acttttagga aactaaaatg gatgctaaac atataaaata ttttgaaaag cttctaggtg
     1201 aagataatgc taaatttgat aaagctcatc aaatagccta ctgctatgat gctacgaaaa
     1261 agcgttttga gcctgatgga gtgctatttc cacgagatga aacagatgta agcaatatac
     1321 tacaatactg caatgaaaac aaaatcgtta tagtcccaag aggcgctgga agcggattta
     1381 ccggcggagc tttagcagcg agcggcggag tcgttttgtc atttgaaaaa catatgaata
     1441 aaatattaga aatagatatg caaaatatgg tagcagtcgt agaacccgga cttataaata
     1501 tgaaactaca aaaagcagta gaagaagtag gacttttcta tccgccagat cctgctagtg
     1561 aaaattacag tacaataggc ggaaacgtga gcgaaaatgc aggcggtatg cgtgctgcaa
     1621 aatatggtat aaccaaagac tatgttatgg ctttaagagc tgtgttgcca aacggagata
     1681 ttataagagc cggaaaacgc actataaaag atgttgcagg gtataatatc gcaggaattc
     1741 tcatagcaag cgaaggaagt ttagccgtta tcacacaaat cacattaaaa ctcattgcaa
     1801 aacctaaatt taaaaaaacc gcaatgggag tatttcctaa cgtaaatgcc gctatgaatg
     1861 ctgtttataa aactatggca gcaggagtaa ctcctgtagc tatggagttt ttggataatc
     1921 ttagcataaa agcagtcgaa acaaaattta aaaaaggtct gcctatatcg gccggggcta
     1981 tccttataag cgatgtcgat ggatcaaatt tagatgtttt agatagcgag ctagagatca
     2041 tcaaaaacgt ttttgagcaa aacggcgcaa ctgagtttag agtagcaaaa gatgaaaacg
     2101 aatctgctga tatatggctt gcaaggcgca actgctctca agctatcaca tgttatggta
     2161 gtttaaaact caatgaagat ataactgttc ctagatccga acttccgaat ttactcgaaa
     2221 aaatagctga aatttctcaa aaatacggcg ttactacacc atgttttggt cataccggag
     2281 atggaaacgt acatacaaat gttatggtag atcgtgacga ccctgacgcg gtaaaaagag
     2341 gtcacgaagc tataactgaa atttttaaag ctaccgtcga gcttggagga actttatctg
     2401 gagagcacgg tataggactt agcaaagcac cttttatggg tcttgcattt agttctgaag
     2461 agatgaacct ttttagaact ataaaaaaag catttgatcc aaataatatc ttaaacccaa
     2521 ataaaatggg actttaaaga aatttcatgc gtaaaatatg ggaaaaacta gtactgatct
     2581 ataaagtgtt agaagataaa cagcttttac attttgctgc aagtcttagt tttcacactc
     2641 ttttatccat cattcctgtt ttatttatat ctctatctat ctttacacaa ctccctagtt
     2701 ttagcggtta ttacgctaag attaaagatt ttatattttc aaatttactt cctagtcaaa
     2761 gcataactga atatatagat cagtttttat ctaattcaag tagccttggt ataataggtc
     2821 ttatagcggt attttttacc agtataatgt tttttagcga ctatgaattt gttatttcaa
     2881 aattaacagg agctaaaagt cgtggatttt ggagaagtct tagtaactac tggactttga
     2941 taactcttat gcctcttggt cttggaatgt cgttttggct ctcaaattta atccaaacaa
     3001 tgcttagcca aagcgaatat acaagcggta taaacttctt agctatattt ccatatataa
     3061 ttatctgggc tatatttgca gtaacttatc tcatatctat aaatagagat ttttctataa
     3121 aaaatatatt gatcagctct tttgccagtt cgcttgcatg gtccatatca aagtggatat
     3181 ttgtaggata tagcttctat aataaaacat actctagtat atacggatca ttttcgatac
     3241 tattattttt ctttatttgg atatatattt cgtggattat atttttatat ggtataaaac
     3301 tatgcgtagc cttagatgga ttaagtagag ataagccagt tatctagctt atctaaacca
     3361 tctcttctgc cctctttaaa agctcttttg cgccgcgcgc tatgaactca tcagcaaaat
     3421 ttttaccggc tattttatat gctaatttcg gataagtttt gctatctctt agaatttcgc
     3481 ttccatctac aagacccaat atcgcctcaa cttctatctt gtcgcctttt aattttgcat
     3541 ttattccgat cggcgcttga catcctccgt ttaacgtatg cacgaaatct ctctctatag
     3601 tagtttcaac tatgcttttt tcatcattta aaaactcgat agcatccaaa atttcttttt
     3661 tatctatagc ctcgattcct aaagctcctt gtcccatagc aggaattgta tctatagctg
     3721 atgtaaattt aacttcctta gaaagattta atcgattaat tccagccata gccaaaataa
     3781 tagcgtcaaa ctcgccattt ttaagcttag ctattcgtga gtttacattt cctctaagag
     3841 atatgatatc aagatcagcc ctatgagcta aaatctgcat ttttctacga agcgaagttg
     3901 ttcctacttt ggcaccttgt ggtaattcat ccaaattttt gtacttcatg ctaagcatcg
     3961 cgtctctcac gtcttctcta ctgcacacgc aagccagttt taatccatct ggaaaagtag
     4021 tcggaacatc ttttaagcta tgaaccgcta tatctgcact accttcaagc atagagtttt
     4081 caagctcttt tgtaaaaagc cctttgccgc ctatctttgc gagcggagta tcaaggataa
     4141 catcgccttt tgtcttcata gtaattatct caacgctatg accttgagca atcaataaat
     4201 ctcttatatg atgagtttgc caaagtgcaa gagcgctatt tctacttgct attttgatat
     4261 tcatttctta tccttttcat ctcttatttt catctattat ctcaacatct attatatcat
     4321 ccctaaacct atcattatcg ttataagtat tagtactaaa cctaacaaat atctttagta
     4381 ttaaagatat aactatgata aaaacagcaa aaatatcact caaagtacca ggcactataa
     4441 gtagcattcc gccaaacgca a
//
LOCUS       DAPPKW010000120         4420 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.120, whole genome shotgun sequence.
ACCESSION   DAPPKW010000120 DAPPKW010000000
VERSION     DAPPKW010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4420)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4420)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4420
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.120"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..297
                     /locus_tag="RPW04_001849"
     CDS             <1..297
                     /locus_tag="RPW04_001849"
                     /inference="COORDINATES: protein motif:HMM:NF016820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbC/VirB2 family protein"
                     /protein_id="HDX6295925.1"
                     /translation="EAKKLARKNLPIIAALLVAFLFIPTELLAAGGLDKAKTLLDKVI
                     EWLNYLSIGVVTIAILVVGYKVLFGGQTIRECTPIIIGAIIIASAATVANLLMG"
     gene            304..3057
                     /locus_tag="RPW04_001850"
     CDS             304..3057
                     /locus_tag="RPW04_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002788503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirB4 family type IV secretion/conjugal transfer
                     ATPase"
                     /protein_id="HDX6295926.1"
                     /translation="MGEEVIYKGLTRPAMVFGVPITPLFFVCALLALLALYINLTISM
                     LIFPAVFIMKEITKKDEFIFRLLFLKLKFFSNPASKRFYQIKTYNGSSYSTMSFNFDY
                     PKISVIGLDKNPNFEKFIPYQTLIDDVVITKDYELLATWEINGIMFEVESDSDIAVSK
                     ERLNTLFRSFASEPISFYFHNCRLATDEKLDANFKNDFLQKLNDKYFESFQKGSSNKN
                     RLFLTAIYTPLDRVTRSSFKKDSLEKRIRELDRYINKMQEYCGNIEAKLSSFGSKRLG
                     IYTKDGNRYSSQLEFYNYLIGGKISPVRVSNSPLFSYLNGSLDSIMFSNSAVQLNLNT
                     GEKRFAKAIEIKDYTQFSYSGMLDILMYLKVEYTITQSFTPMAKSEAQADLAKQKKQL
                     ISSEDDAVSQVMELEHALDELSSGSLCFGKYHFSLIVYANSVKEVEQSTNLVITTLSN
                     LGFLTSVANIALPATYFAQFPANFGIRPRIHTISSKNYSSLIALHNFSSGKKDKNCWG
                     NAVTLLKTPNNQPYYFNFHETQIGKDSFGDFLLANTLVIGKSGGGKTVLMNFLLNQLC
                     KYADTSTFPDDVPMEKRKATFFYLDKDKGAIGNIIAMGGKYLTIDGGRPTGFNPFMVE
                     NTAENIRKLQVLMKMLVTRNNEILTTLEEKNLNNAVESIMNNFEKSERKFGISLMLEH
                     LYSRNEEVNSLRSRLELWSKKGKFGWVFDNENDELDFSDDSINVYGIDGTDLLKDKEI
                     SGMVSFYILWRIMDLTDGRRFALFIDEAWDWISNPVVAEEVHNKEKTIRKLNGFLVLG
                     TQSVEDFAKSNIATAILEQSATILLLSNPKAKEEDYCGKLNLTQEEYLFAKNTLPDEY
                     KFLIKKGVDERTIANIDLSKIGKTYLKILSTGKVYVNAIEEINKQSLSYDEKFRKILE
                     LYQ"
     gene            3067..3813
                     /locus_tag="RPW04_001851"
     CDS             3067..3813
                     /locus_tag="RPW04_001851"
                     /inference="COORDINATES: protein motif:HMM:NF019608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein"
                     /protein_id="HDX6295927.1"
                     /translation="MKAFKKIVLVGFVTANAAFASGIPVVDAAANAQIMQQNIKQVLE
                     WAKEAKRWTDTALHYKSQLEAYAKELEAQSGIRDAVSFLQDAKDIYDEAKAAGKNISE
                     IKDFVSDAANIKNSLSSKAKDLMNKYFEYDRCNRYSAPQQQNICYQKQSAVVENIVFL
                     NERSENISSYTKDLNRLAKKLKNSKDVKESADIGNAIQLKVALLQAEKTQIDLMNDKK
                     ERNKEVIEEREKAEALQQWNTRANKELFKD"
     gene            3817..>4420
                     /locus_tag="RPW04_001852"
     CDS             3817..>4420
                     /locus_tag="RPW04_001852"
                     /inference="COORDINATES: protein motif:HMM:NF016491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein"
                     /protein_id="HDX6295928.1"
                     /translation="MGLDAEQLKNIEGSAADLRDLIIAIGKKIDGTNGTGFVNEISGA
                     FSTNFQDYILGFKIILSVWLTAWIIYEGLQIAYGRNNKNVKDFMWDSFMKFVFISVCL
                     YPDVFTNMLKNALDGIREYTLGSGKSSSLYALLGDFAYNVSKATNIMTTSSGFFNIFS
                     DKPNAIVAYLSAIICYIGFFVGAIPAIITLAINSLSFYLLA"
BASE COUNT         1563 a          660 c          835 g         1362 t
ORIGIN      
        1 gaagcaaaaa aattagctcg taaaaatctc cctataattg ctgcacttct tgtagcgttt
       61 ctttttattc ccacagaact tctcgccgca ggtggcttag ataaagccaa aaccctttta
      121 gacaaagtca tcgaatggtt aaattatcta tcaatcggtg tcgttacaat cgcaattttg
      181 gttgtaggct ataaagtgct ttttggtggt caaactatca gagaatgcac cccaatcatt
      241 ataggtgcaa ttattattgc aagtgctgca actgtagcaa atcttttgat gggttgataa
      301 aaaatgggcg aagaagtgat atataaaggc ttaacgcgac cagcaatggt attcggagtt
      361 cctataactc cgttattctt cgtatgtgcc ttattagcac ttcttgccct ttatataaat
      421 ttgacaatct ctatgttgat atttccagca gtgtttatca tgaaagagat tacaaaaaaa
      481 gatgagttta tttttagact acttttttta aagcttaaat ttttttcaaa tccagccagt
      541 aaaagatttt atcaaatcaa aacttacaat gggagttctt attcaaccat gtcttttaac
      601 tttgattatc caaaaataag cgtgatagga cttgataaaa atccaaattt cgagaaattt
      661 atcccttacc aaacactgat tgatgatgtt gttataacca aagactacga gcttcttgcc
      721 acttgggaaa ttaatggaat tatgtttgaa gtcgagagcg atagtgatat tgcagtgtct
      781 aaagagcggt taaatactct ttttagatca tttgccagcg aaccaatttc attttatttt
      841 cacaattgca gacttgctac ggatgaaaaa ttggatgcaa attttaaaaa tgactttttg
      901 caaaaactca atgataaata ttttgagagt tttcaaaagg gtagttcaaa taaaaataga
      961 ctttttctaa cggctatata tacgccatta gatagagtta ctagatcgtc ttttaagaaa
     1021 gatagcctag aaaaacgcat tcgtgaactt gatagatata ttaacaaaat gcaagaatat
     1081 tgcggaaata ttgaagctaa attaagtagt tttggttcaa aaagacttgg tatttataca
     1141 aaagatggca atagatattc aagtcaactc gaattttata actatcttat cggtgggaaa
     1201 atatcacctg tcagagttag taattctcca ttatttagct acttaaacgg tagtttggat
     1261 agcataatgt tttcaaatag tgcagttcag ctaaatttga atactggcga aaaaagattt
     1321 gcaaaagcta ttgaaataaa agactatacg cagttttcat attctggaat gcttgatatt
     1381 ttgatgtatt taaaagttga atatacaata acgcaaagct ttactcctat ggcaaagtca
     1441 gaggctcaag ccgatcttgc caaacaaaaa aagcagctca ttagctcaga agatgatgcg
     1501 gttagtcagg ttatggagct tgaacatgca cttgatgaac tttcaagcgg atcgctgtgt
     1561 tttggaaaat atcatttttc gttgatagtt tatgccaata gcgtaaaaga agtcgagcag
     1621 agcacgaatt tggttattac aacattaagc aatttaggat ttttgacttc ggtcgcaaat
     1681 atagcactcc cagccacata ttttgctcag tttcctgcaa atttcggcat acgcccacga
     1741 attcacacaa tttcgagcaa aaattattca agcttgattg ctttgcataa tttttcgtct
     1801 ggcaagaaag ataaaaattg ctggggcaat gctgtaactc ttttaaaaac accaaataat
     1861 cagccttatt attttaattt ccatgaaaca cagattggaa aagatagttt tggtgacttt
     1921 ttattggcaa atactttggt aatcggaaaa agtggtggcg gaaaaaccgt cttaatgaat
     1981 tttttactaa atcaactttg taaatacgca gacactagca ctttccctga tgatgtgccg
     2041 atggaaaaaa gaaaagcgac atttttctat cttgacaaag ataaaggtgc gataggaaat
     2101 attattgcaa tgggtggaaa atatcttacg atagacggag gtcgcccaac tggttttaac
     2161 ccttttatgg ttgaaaatac ggctgagaat ataagaaaac ttcaagttct tatgaaaatg
     2221 cttgtaacta gaaacaatga aattttgaca accttagaag aaaaaaattt aaataatgct
     2281 gttgaaagca ttatgaacaa ctttgaaaag tcagaaagaa aattcggtat ttcattaatg
     2341 cttgaacatc tttactctag aaacgaagaa gtaaattctc taagatcaag gcttgaatta
     2401 tggagtaaaa aaggtaaatt tggttgggtg tttgataacg aaaatgacga gctggatttt
     2461 agcgatgaca gcataaatgt ctatggtatc gatggaacag atcttttaaa agacaaagag
     2521 attagcggta tggtgtcatt ttatatcctt tggcgaatta tggacttaac agatggcaga
     2581 cgctttgctc tttttataga tgaggcttgg gactggataa gtaatccagt agttgccgaa
     2641 gaggtgcaca acaaagaaaa aactattaga aaacttaatg gatttttggt tttaggaact
     2701 caaagcgttg aggattttgc aaagagcaat attgcaacag ccatactcga acaaagtgcg
     2761 acaatccttt tgctttcaaa tccaaaagcc aaagaggagg attattgcgg aaagctaaat
     2821 ttaacacaag aggagtattt atttgctaaa aatacactcc ctgatgagta taaattttta
     2881 atcaaaaaag gcgttgatga gagaacgatt gccaacattg atcttagcaa gataggaaag
     2941 acttatctaa aaattttatc tactggaaaa gtctatgtta atgccataga agagataaat
     3001 aaacaatcgt tgagttatga tgaaaaattt cgtaagattt tagagcttta tcaataagga
     3061 gaaaaaatga aagcttttaa aaagatagtt ttggttggct ttgttacagc aaatgctgcc
     3121 tttgcaagcg gtattcctgt tgttgatgct gctgcaaatg cccaaattat gcaacaaaat
     3181 attaaacagg tcttagaatg ggcaaaggag gctaaaagat ggactgatac agccttacac
     3241 tataaaagcc aacttgaagc ctacgcaaaa gagcttgagg ctcaaagcgg tataagagat
     3301 gctgtttcct ttttacaaga tgcaaaggat atctatgacg aagcaaaagc tgctggtaaa
     3361 aatatatctg agatcaaaga ctttgtaagc gatgccgcaa atataaaaaa tagtctaagt
     3421 agtaaagcaa aagatttgat gaataagtat tttgaatatg acagatgcaa caggtattca
     3481 gcccctcaac agcaaaatat ttgttaccaa aaacaatcag cagttgttga aaatattgtc
     3541 tttttaaatg agagaagcga aaatataagc tcatatacaa aagacttaaa cagactagct
     3601 aaaaaactaa aaaattcaaa agatgtcaaa gagagtgctg atattggcaa tgctatacag
     3661 ctaaaagtcg cattactaca agcagaaaaa actcaaattg atttgatgaa tgacaaaaaa
     3721 gagcggaaca aagaagttat cgaggagcgt gaaaaagctg aagcattaca acagtggaat
     3781 acacgcgcaa ataaagagct ttttaaggac taaaatatgg ggcttgatgc tgaacaactt
     3841 aaaaatatag aaggttctgc agctgatctt agagatttga tcattgcaat agggaaaaag
     3901 atcgatggga ctaatgggac aggctttgtt aatgaaattt caggagcttt ctctactaat
     3961 tttcaagact atatactggg ttttaagatc attttgagtg tttggctaac ggcttggatt
     4021 atatatgagg gtttgcaaat cgcttatggc agaaacaaca aaaatgtcaa agattttatg
     4081 tgggatagtt ttatgaagtt tgtttttatc tctgtttgtc tgtatcctga tgtttttaca
     4141 aatatgctaa aaaatgcact tgatggcatt agagaatata cacttggtag tggtaagtca
     4201 agtagtttat atgcattact tggcgatttt gcatacaatg tttcaaaagc cacaaatatc
     4261 atgactactt catcaggatt ttttaatatt ttttcagaca aaccaaatgc tatagtggca
     4321 tatcttagtg ccattatatg ttatataggc ttttttgtag gtgctattcc agccattata
     4381 acattagcca taaattcact atctttttat ctacttgcag
//
LOCUS       DAPPKW010000121         4126 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.121, whole genome shotgun sequence.
ACCESSION   DAPPKW010000121 DAPPKW010000000
VERSION     DAPPKW010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4126
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.121"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            104..1678
                     /locus_tag="RPW04_001853"
     CDS             104..1678
                     /locus_tag="RPW04_001853"
                     /inference="COORDINATES: protein
                     motif:HMM:NF019421.1,HMM:TIGR03071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HipA family
                     toxin"
                     /protein_id="HDX6295929.1"
                     /translation="MSLKAVTIAILDILLSKKQYLSLKEISLSLTKFNITDRQILNEI
                     TALMKTNRLVKDGIRQNSLYAASTPQKAHQNSRFIYVFKNRILAGMLFEIPDGFLFYY
                     TNDYLVSGLEAVPTMPLSIQPFSFNTIPPFFDQNIPEGINLEILKFQLNSSDALHILA
                     SLSDPIGDISFSFSPKTAQSQISNPSYLSNLEKILSDNPKINILKDFYVDIPNEILFP
                     ENYDLSKLELAQNDGISGFQYKKLVNIDFERKIIHQDAASNYILKPYSKIRSNPTSQS
                     YFPHIAINEHLHLSFAKNTLKIRVPWSAVVAGDDEYHYVIKRFDKLENHHYNVVEFAS
                     YLGLTSINKYDTTSEKLFKRISKELLSDTEKKELLKIYVYSVIIKYEDLHAKNLSLIT
                     SGDIVLMAPMYDVMSTGFYSTAKGFESYLPINGKRQNIRLNDFKPLCKILNVDFKEFK
                     QIAFSIANSYKDEFSSYIDLIKPLNLKFYKQKLVKRVGDESFLVPSDKYENLSTLLEQ
                     FHTKRVEELKFLGWIQ"
     gene            complement(1961..>4126)
                     /locus_tag="RPW04_001854"
     CDS             complement(1961..>4126)
                     /locus_tag="RPW04_001854"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295930.1"
                     /translation="TYVGNGTNKSTLSAFDKIDGGAGRDTLNAIFTANNNAAAATKLD
                     QAEIDKSVKGVTNVENINIISDLETSGDFVFNGYEKVGFNVLGDIASFATDASKSVNV
                     ETTGTITAFTAAGTGKVDVVAGKISALTADSATSVNLTATNDTITLTSANAATSVNLK
                     TSGAAKDATITSANAAKNITIDATGVATITSATAVENLTVKHATNVALNGDMDKLATV
                     TLDNAALTAAIDIKSASTLNLINSSVNGQNISTAAKDVTVNLSGAAAKVKLNTTAATD
                     QTVTLKANATDNSLEFDSATAKTTSVTASGSGKTLVIKGAEVETLVNIDTTAFNGAAD
                     VSFGKAGQGGKFSVKTGTGDDKIEFVGTTLTEGSVIDGGAGNDTIAMKSAALTSANFT
                     MIKNIENVAISDAVATADLSSSAFKNIIITTKEVADTTLTINKNQVINFTAADAGSVK
                     LITVKLNDATGANDVVKIVLDAAAKDASIALGTATADKALVIDTGIETLNITSLVKAT
                     SPENTANTVNAKLTDVTSIIIDGDAKITLGHAGTAGTDYSKVSMIDASALKAGLTFDA
                     SAITLGANATIKGGSGADSITVKGGNIVVDLVAGGDDTITLKKGAEKTDITTVNNFNA
                     GDKIDIADAKNGTFTFNKITMNSDANLDDYITKAVAGDGSTNSAVSYFHHNGYTYVVV
                     DGTAGATFTKATDTIIKLSGTLDLKLSGDNVVVDDGSVI"
BASE COUNT         1323 a          751 c          686 g         1366 t
ORIGIN      
        1 aggagaatga ttaaaagatt aaacagtata gaaatttaag tagaaatgta ttataatatt
       61 aaagtaaatt taaatgattt ctaaattagc ttaaaggaaa aaaatgtcat taaaagcagt
      121 aactatagct atcttagata ttttattatc taaaaaacaa tacttaagct taaaagaaat
      181 atctctttct ttaactaaat ttaatatcac ggatcggcaa attttgaatg agataactgc
      241 gcttatgaaa acaaacagat tggttaaaga cggtatcaga caaaattctc tttacgccgc
      301 ttctacgcct caaaaagcac atcaaaatag ccgtttcata tatgtattta aaaaccggat
      361 tctagcagga atgttgtttg agataccaga tggatttttg ttttactaca caaacgatta
      421 tttagttagc ggtttagaag ccgttcctac catgccgctt agcattcagc cgttttcatt
      481 taatacaatt ccgccgtttt ttgatcaaaa tattccggaa ggcataaatt tagaaatcct
      541 aaaattccag ctaaactcat cagacgctct ccacatatta gccagtttga gcgatcctat
      601 cggcgatatc agtttttcat tttcgccaaa aacagctcag agtcagatat caaacccaag
      661 ctatttatca aatttagaaa aaattttatc agataaccca aaaatcaata ttttaaaaga
      721 tttttatgta gatattccaa atgagatatt atttccggaa aattatgatt taagtaaatt
      781 agagctagct caaaatgacg gtatatcggg atttcagtac aaaaaattag taaatatcga
      841 ttttgaacga aagataatcc atcaagacgc tgcttcaaac tatattttaa aaccatattc
      901 gaaaatcaga tcaaatccaa ccagtcaaag ttattttccg cacatcgcga taaatgagca
      961 tcttcatttg agttttgcta aaaatacgtt gaaaatcaga gttccgtgga gtgctgtagt
     1021 ggcaggagat gacgagtatc actacgtaat taaaagattt gataaactag aaaatcatca
     1081 ttataacgtc gtcgagtttg cctcgtatct aggacttact agtataaata aatatgacac
     1141 aaccagcgaa aagcttttta agcgcataag caaagagcta ctatcagata ctgaaaagaa
     1201 ggagcttttg aagatatatg tttatagcgt tatcataaaa tacgaagatc tgcatgcgaa
     1261 aaatctttct cttataacaa gcggagatat agtgctgatg gcgcctatgt atgacgtgat
     1321 gagcacggga ttttatagta cggcaaaagg atttgagagc tatttaccta taaacggtaa
     1381 gcgtcaaaac attaggctaa acgattttaa gccgctttgt aaaattttaa acgttgattt
     1441 caaagagttc aagcagatcg cttttagtat agctaatagc tataaagatg agtttagttc
     1501 atatatagat cttataaaac ctttaaattt aaagttttat aaacaaaaat tggtgaaaag
     1561 agtcggagac gagagttttc ttgttccaag tgacaaatat gaaaatttat caaccttatt
     1621 agaacaattt cacacaaaaa gagttgaaga gctgaaattt ttaggatgga tacaatagac
     1681 aaatttcgat caaaacatca aaaaacagat atgttgaatt taaaatacaa ctcaaataaa
     1741 tttaaaaata ttcaaggagc tagttctcct agctcctctt agcaaaaaac tatctactat
     1801 ttattaaggt ttggtctaaa atatactttg tctctataaa accttatttt aagacgatcc
     1861 gtctgacgag atttcaaata aatacgccta agctaagata aatttagaca aattaaaagc
     1921 cttaaaaatt aaggcttttt tatcaagcaa ttactattgc ttaaattacg cttccatcat
     1981 caactacaac attatctccg ctaagtttaa gatctagcgt acctgaaagt ttgataattg
     2041 tatcagtagc tttagtgaaa gtagctccag ctgttccatc aactactaca taagtatatc
     2101 cattatggtg gaagtagctt acagcagagt ttgttgatcc gtctcctgct actgctttag
     2161 tgatataatc atctaaatta gcatcgctat tcattgtaat tttattaaat gtgaaagtac
     2221 catttttggc atcagctata tctatcttat cgccagcatt aaagttatta acggttgtaa
     2281 tatctgtttt ctcagcacct tttttaagag ttatagtatc gtctccgcca gcaactaaat
     2341 ctacaacgat atttccgcct ttaacagtta tactatcagc tccagagcca ccttttatag
     2401 tagcattagc tcctaatgtt atagcacttg catcaaatgt aagaccagct ttaagagcac
     2461 ttgcatctat catagaaact ttactatagt cagttccagc agtgccggca tgacctaaag
     2521 taattttcgc atccccatct ataatgatag aagttacatc tgtcaattta gcatttacgg
     2581 tatttgctgt attttcaggg cttgtagctt taactaacga agtgatatta agagtttcta
     2641 tacccgtatc aattacaaga gctttatcgg ctgttgctgt gcctaaagct atactagcat
     2701 ctttagcggc agcatctaat actattttta caacatcatt agcgcctgtt gcatcattta
     2761 gtttcactgt aataagctta actgagcctg catctgccgc agtaaaatta attacttggt
     2821 ttttatttat agttaaagtc gtatcagcaa cctctttagt agttatgatg atatttttaa
     2881 acgcagaaga gctaaggtca gccgtagcca ccgcgtcgct aatagcaaca ttctctatgt
     2941 ttttgatcat agtgaaattt gcactagtca aagcagctga tttcatagct atagtatcat
     3001 tacccgcgcc gccatcgatt actgaacctt cagttaaagt tgtgcctaca aactctattt
     3061 tatcatcgcc tgtacctgtt tttacgctaa atttgccgcc ttgaccagct ttgccgaagc
     3121 taacatctgc agcgccattg aacgcagtag tgtctatatt aactagagtt tctacttcag
     3181 cacctttgat aaccaaagtt tttccactac cactagcagt gactgacgta gtttttgcag
     3241 ttgcgctatc aaattcaaga ctattgtctg tggcattagc tttaagagtc acagtttgat
     3301 ccgtagcagc agttgtgttt aatttaacct tagcagcagc tccgcttaaa tttacagtaa
     3361 cgtcttttgc tgctgtagag atgttttgtc cgttaacact tgaatttatt aaatttagtg
     3421 tgcttgcaga ttttatatct attgcagcag ttaaagcagc attgtcaaga gtaactgttg
     3481 caagtttatc catgtcacca tttagcgcta cgttagttgc atgtttaact gtcaaattct
     3541 ctacagccgt agctgaagtt atagttgcaa ctcctgttgc gtctattgtt atattttttg
     3601 ctgcatttgc ggatgttatt gtagcgtctt tggctgctcc gcttgttttt aaattcacac
     3661 tagtagcagc gtttgcactg gttaatgtga tagtgtcgtt tgtagcagtt aaatttacgc
     3721 ttgttgccga atcggccgta agggcagaga ttttaccggc gacaacatcg actttgcctg
     3781 ttccggctgc ggtgaaagca gttatcgttc ctgttgtttc tacatttacg cttttagatg
     3841 cgtcggtagc aaagctagct atatcgccaa gtacgttaaa tcctactttt tcataaccgt
     3901 tgaaaacgaa atcgccactt gtttctagat ctgaaattat attgatattt tctacgtttg
     3961 taacgccttt tactgattta tcaatttcag cttgatcaag tttagtagcg gcagctgcgt
     4021 tgttatttgc agtaaatatc gcattcaacg tatctctccc agcaccacca tctatcttat
     4081 caaatgcact aagagtactc ttattagtac cattacctac atatgt
//
LOCUS       DAPPKW010000122         4109 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.122, whole genome shotgun sequence.
ACCESSION   DAPPKW010000122 DAPPKW010000000
VERSION     DAPPKW010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4109)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4109)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4109
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.122"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..1160
                     /locus_tag="RPW04_001855"
     CDS             <1..1160
                     /locus_tag="RPW04_001855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295931.1"
                     /translation="IDKKALFLNLKTNFNSAKPAFLAIIFFIIYVAVVSFFPYDPRFN
                     SFKEAFSEFGRGSVFLIVILCWFDGSKDKIKFMFYSVILAFIFVTISYSKPLFFNFND
                     IDAETFESGRIISRAYADYVDRFLAFGLISMLFFRSNSIRFLSLILCIILPIIMDVLA
                     GARGSYLAGFVCIVLFFIISYQNGFKEIYKKNLKYIVVFAAICFSAIFLILFDSSIAK
                     YKLSQGSYSSGRDLILKERLPLLLNSPRAFVGLGYGKDQYDSFLRDENDKGANISMMQ
                     IHKDSGERFWWNDEPFFVGKYYYYGVFGTSMLVFIVLWLVLVSYSKFKTTRNLMYLAI
                     FLSVIAYFGVRGLFESINLRILYMFYMVGFVMMLNSYYKKDSDENFAYKKR"
     gene            1132..2052
                     /locus_tag="RPW04_001856"
     CDS             1132..2052
                     /locus_tag="RPW04_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDX6295932.1"
                     /translation="MKILLIRNDNIGDLICTTPAIEALRKHFRNDQIDIVVNSYNECV
                     IKNNPFINKIYSYTKPKHKKGILQKLKAVFGKAKMLFEIYKTGYDTAIIFRTGYSASA
                     ELFAITSRAKKIIGVGDKNGKSHVSDKILFSGEHEVMFCFECLKSFGICYNGEKTLFV
                     PDSMSEQYKDFVFFHISSRIPQNMLNDEQILGISGFLKSKFDNVVITAEDSDFGQNIS
                     KKSGIKYLKTSSFNELANFLSGAKLLLSCDGGVMHLGPALGVKTIGILGKTNINRWSP
                     WGAKCLQDESLVASNLNIQTVFDAVNEVIK"
     gene            2049..3104
                     /locus_tag="RPW04_001857"
     CDS             2049..3104
                     /locus_tag="RPW04_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012140209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HDX6295933.1"
                     /translation="MINILELESSLGFGGQEHRTMRLINALDESKFKVFYGLNRGSKS
                     LEKPIKCSFVEFNLKKVYNIFTVIKICWFVKKNGIKIISTHSGKDGNIGSIVGKICGV
                     KVVRTRHLQTPIKSPFSYNLSSKVVAVSNATKESLVRRGVKENLIEVIRTGVDTQKYT
                     KNFKLNLKKELGLSEETVLIGIVAVLRAAKNHKLLVEAFNELNLPKTALVIIGDGPQK
                     QNLENLIIGRNNIFMLGNRDNVSEFLGSLDIFVLPSNMEALGTAILEASSAGVACIGS
                     RVGGIPEAIKDAQTGLLFENGNLESLKTALKILIENTDLRAEFAKNGIKYVKDSFSTE
                     VMAKKTQQIYEELVNED"
     gene            3094..>4109
                     /locus_tag="RPW04_001858"
     CDS             3094..>4109
                     /locus_tag="RPW04_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDX6295934.1"
                     /translation="MKINFYELVVKFLLRNKKVIKTNLVSESFKTVCFFSNTAIGDTL
                     FNIPVFREFKKVYPDKKAIALLNPSNADLFINSPFIDEIILYNGKWSGFFKTLNILKS
                     KNIDIAFLLHSNEPQATPLAVLSGIKYIFKLPNSKNEFNHFHSNSTLAYGKLRYIVLN
                     RLEQLSFIGINSDNTRLELFLEDSCYKNVDKILKRSGGEKFIGFQMGASTVSRQWFLQ
                     RWKELGDLILKQTNAKIVLTGSPSEKHMCYALEKLLDSKNVLNLAGKFSIKEAAALID
                     RLDIFITPDTGPLHIAAALRTPTIALFIVAEPENSNPNFDTDIHKFIKKERTCEICVS
                     KRCK"
BASE COUNT         1398 a          566 c          789 g         1356 t
ORIGIN      
        1 tgatagataa aaaagcacta tttttaaatt taaaaacaaa tttcaatagt gcaaaaccag
       61 catttttggc tattatattt tttattatct acgttgccgt agtatcgttt tttccatatg
      121 atcctagatt taattcgttt aaagaggctt ttagcgagtt tggaagaggc tctgtatttt
      181 tgatagttat tttatgctgg tttgatggta gcaaagataa gataaaattt atgttttatt
      241 ctgttatttt agcttttatt tttgttacga tttcttactc taaacctctg ttttttaatt
      301 tcaatgatat cgatgcggag acgtttgaga gcggaaggat tattagcaga gcttacgctg
      361 attacgtaga tagattttta gcttttggac taatatctat gctgtttttt agatcaaatt
      421 cgatacggtt tttatcgctg attttatgta taattttacc tataattatg gacgttttag
      481 ccggagccag aggtagttat ttggctggat ttgtctgtat cgttctattt tttattatta
      541 gttatcaaaa tggatttaaa gagatttata agaaaaattt aaaatacata gtagtttttg
      601 cagccatctg cttttctgct atttttttga tactttttga ctcatctatc gctaaataca
      661 agctttcgca aggatcatat agttccggaa gagatcttat actaaaagag agacttccgc
      721 ttttgctaaa tagcccaaga gcttttgtcg gattagggta tggcaaagat cagtatgact
      781 catttttacg tgatgaaaat gacaaaggag caaatatctc tatgatgcaa attcataaag
      841 atagcgggga gagattttgg tggaacgatg aacctttttt tgtgggaaaa tactattatt
      901 acggtgtatt cggcacatca atgttggttt ttatagtgct ttggcttgtt ttggtatctt
      961 actctaaatt taaaacaaca agaaatctta tgtatctagc tatatttttg tcggtgattg
     1021 catattttgg agtgagaggg ctatttgaat caattaactt acgaatatta tatatgtttt
     1081 atatggttgg atttgtgatg atgcttaact catactataa aaaggatagt gatgaaaatt
     1141 ttgcttataa gaaacgataa tataggtgat cttatctgca cgactcctgc tatagaggcg
     1201 cttagaaaac attttcgtaa cgatcaaatc gatatagtag taaatagtta taatgaatgc
     1261 gttataaaaa ataatccatt tataaataaa atttatagtt atacaaaacc aaagcataaa
     1321 aaaggaatcc tccagaagct aaaagccgtt tttggtaaag ctaaaatgct gtttgaaatt
     1381 tataaaaccg gttatgacac tgcgattata tttcgcaccg gctactccgc ttctgccgaa
     1441 ttattcgcta taactagtag agcaaaaaaa ataatcggag taggcgacaa aaatggtaaa
     1501 tcacacgtta gtgataaaat attattttca ggtgagcatg aagttatgtt ctgttttgag
     1561 tgtttaaagt cgtttggaat atgctataac ggtgaaaaaa cactttttgt accagatagt
     1621 atgagtgagc aatataaaga ttttgtattt tttcatatta gttcaaggat ccctcaaaat
     1681 atgctaaatg acgagcagat tttgggcata tctgggttct taaaatccaa attcgataat
     1741 gttgttataa cggctgaaga ttctgatttt ggacaaaata tatccaagaa aagcggtata
     1801 aaatacctaa aaacatcaag ttttaacgag cttgcgaact ttttaagcgg cgcaaagctg
     1861 cttttgtcgt gcgatggcgg tgttatgcat cttggaccgg cgctcggtgt aaaaactata
     1921 ggaatactcg gaaaaacaaa tataaatcgt tggtcgccgt ggggagcaaa atgtcttcaa
     1981 gatgagagcc tagtagcttc aaatttaaat atacaaacgg tatttgacgc agttaacgag
     2041 gtgataaaat gataaatata ttagagcttg aaagctcact tggatttggt gggcaagagc
     2101 atagaactat gcgtcttatc aacgcgcttg atgagagtaa atttaaagta ttttacggat
     2161 taaacagagg gtcaaaatct cttgaaaaac ctataaaatg cagcttcgtg gagtttaatc
     2221 tgaaaaaagt ttataatatt tttactgtta ttaaaatttg ctggtttgtt aagaaaaacg
     2281 gcattaagat tatttctaca cattctggaa aagatggaaa tatcggctct atcgttggta
     2341 aaatttgcgg cgtaaaagtc gtgcgtacaa gacacttgca aactcctata aaatcaccgt
     2401 ttagttataa tcttagctca aaagtagtag ccgtttcaaa tgctactaaa gagtctctag
     2461 taagacgtgg tgtaaaagag aatttgatag aagttatccg cacaggtgtt gatactcaaa
     2521 aatatactaa aaattttaaa ttgaatttaa aaaaagagtt agggttgagt gaagaaactg
     2581 tattgatagg catagtagca gttctaagag cggctaaaaa tcataaactt ttagtagaag
     2641 cttttaacga gttaaactta cctaaaacag ctttggttat tatcggcgac gggcctcaaa
     2701 aacagaactt agaaaatctt ataatcggta gaaataacat atttatgctt ggaaatagag
     2761 ataacgtgag cgagttttta ggttcgcttg atatctttgt gttgccatca aatatggagg
     2821 ctctgggcac tgctatctta gaagcaagta gcgcaggagt tgcttgcata ggaagtagag
     2881 tcggaggcat accagaagct atcaaagacg ctcaaacagg acttttgttt gaaaacggaa
     2941 atttagaaag tctaaaaacg gctttgaaaa ttttgataga aaacacagat cttagagctg
     3001 agtttgcaaa aaacggtata aaatatgtaa aagatagctt ttctactgaa gttatggcaa
     3061 aaaagacgca acaaatttat gaagagctgg taaatgaaga ttaattttta tgagttggtc
     3121 gttaaatttt tacttagaaa taaaaaagtt ataaaaacca acttggtaag cgaatctttt
     3181 aaaaccgtct gtttttttag taataccgcc ataggagaca cgctttttaa cattcctgtt
     3241 tttagggaat ttaaaaaggt atatccagat aaaaaagcca tagctctttt aaacccatca
     3301 aacgcggatc tgtttataaa tagtccgttt atagatgaaa taattttata caatggtaaa
     3361 tggagcggtt ttttcaagac tttaaatata ttgaaatcca aaaatataga tatagctttt
     3421 ttgcttcatt caaatgagcc tcaagctacg ccattagcgg ttcttagcgg tataaaatat
     3481 atttttaaat tgccaaattc taaaaatgaa ttcaaccatt tccactcaaa ctctaccttg
     3541 gcttatggca aacttaggta tattgttcta aatagactgg agcagcttag ttttatagga
     3601 attaactctg ataatacgag acttgagcta tttttggaag atagttgtta taaaaacgta
     3661 gataaaatct taaaaagaag cggcggcgag aaatttatcg gttttcaaat gggtgctagt
     3721 acggtttcta gacagtggtt tttacagcgt tggaaagagc ttggagattt gattttaaaa
     3781 cagactaatg caaaaatagt tttaaccgga agtcccagtg aaaagcatat gtgctacgct
     3841 cttgagaaat tgcttgatag taaaaatgtt ttgaatttag ctggcaaatt tagtataaaa
     3901 gaagcagcag cgttgataga taggcttgat atttttatca ctccagacac gggaccgcta
     3961 catatagcag ctgcacttag aacgcctact atagcattat ttatcgtagc agagcctgaa
     4021 aattcaaatc caaattttga caccgatata cataaattta taaaaaaaga aagaacttgt
     4081 gaaatttgcg tttcaaaaag gtgtaaata
//
LOCUS       DAPPKW010000123         4071 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.123, whole genome shotgun sequence.
ACCESSION   DAPPKW010000123 DAPPKW010000000
VERSION     DAPPKW010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4071
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.123"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..2239
                     /locus_tag="RPW04_001859"
     CDS             <1..2239
                     /locus_tag="RPW04_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HDX6295935.1"
                     /translation="EGTNAVTIDSENLATINYKAGTDAKAAAEASGKVNASEATNLTI
                     NLEANTKTTNTNAEVIAEKATSITLNVAEVKEAQAISIAAPKAVSLSINNKSAAGLQT
                     NLDGTDNIVENLTISTDGAFKFVANNHFEKANVVTLSGDNAKSAVTLGNIGSNGAEHD
                     IQITASGLKSGLTVGSVLAVARYIKENNVNVDVSGVTGRVALGNMSGSNVSVNANSSA
                     SLKLGNIDVIRTATVNAGAIDGAVDIGDVYAKTANIDLSKTLGNVYVNNITADTISYN
                     GSTLKSNGYHGELNLASAKGKAFTAVVNGSLTNDHIIVKASDATESIKVSGNLDIGND
                     MATIRSGKKTNSINISELKATNLFETIYLDNTTESNVAVKLGNFISNVVWKLDSSLTT
                     AKLSGDMGTGSQNTVMIDTSKAKYLTAIDISELAGEFNSIIMMAGANTEITEVKGSEK
                     GNDILYFNAINSGADFIKLTDIDHNIDKIAIGGTHSVTVAYAAIADKTVDMTNTDLLM
                     LPHIEQSEIVPHNNTLSIIAGDTYSSINLSHIYGQTTDQVITTLNTATKTVTLGNQVL
                     VDGTGNKVTDIIKADAGKGMVTINGFDKTADKINFTTAVTDKGGLTTATVVTGVKSSD
                     DTNDVHIKVAAGATGVVSFFKGKSGAEADSNFVATDANILNIAKALNSAQDSTTKDAT
                     KTAPNGVYIVNVATDGYREAYSYIINIGATNADTDDTIIKIAGVADIAIAQVTQIGRA
                     LSEQA"
     gene            2484..3872
                     /locus_tag="RPW04_001860"
     CDS             2484..3872
                     /locus_tag="RPW04_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDX6295936.1"
                     /translation="MQNIIINQNKHWSEPYKNLYDRQVMPKLINSLKLRHIMVLQGIR
                     RSGKSTVFKLLINHLSKSVDSKEILYINLDDPFFSTKSKDARVINDIVSLSQRLTNKR
                     VKYLFLDEISAVNNWEKYVKSAYDSELFDKIFITGSNSALLNTQYATLLSGRYLSTQI
                     YPLSFKEILKINNINDYFELIKEKNHVLNLVQDMAKFGSFVEVYESNSEFKRDIISSY
                     YDAILLKDCVANNQIRDIAGFRELGFYSLTNFGALYSYNSLSNAVKLNPKSVQEYIGY
                     LQECYLCDELKMFSYSLKEQMNNKKKLYLCDNGFLSLAFSFSDNKGRALENLVFCELK
                     KLGFELFFYKTNDSECDFIARKNDKSIALQVCYELNEKNIKREIAGLNKLPFGVNEKY
                     LITFDDRWETELSQFNLRDLGLNLDNYKHRDFPGGDENSETREKSNEKKLKIMPFYEF
                     FSEFNETTNLAL"
BASE COUNT         1534 a          623 c          732 g         1182 t
ORIGIN      
        1 tgaaggtaca aatgcagtaa ctatagatag cgaaaactta gctactataa attataaagc
       61 aggtaccgat gcaaaagctg cagctgaagc aagcggtaaa gtaaatgcta gcgaagctac
      121 aaatcttact ataaatttag aagccaacac aaaaacaaca aatacgaatg cagaagttat
      181 cgcagaaaaa gccacaagta taacattaaa cgtggctgaa gtaaaagagg ctcaagccat
      241 aagcatagct gctccaaaag ctgtctcatt aagcataaat aacaaatcag cggccgggct
      301 tcaaacaaat ttagacggaa cagataatat agtagaaaat cttactatat ctactgatgg
      361 agcattcaaa tttgtagcaa ataatcattt tgaaaaagca aacgtagtaa ctttaagcgg
      421 agacaatgcc aaatcggccg tgactctagg caacatagga agcaatggag ctgaacatga
      481 tattcaaatc acagctagcg gactaaaaag cggattgact gtaggaagcg tattagctgt
      541 tgcacgctat attaaagaaa acaatgtaaa cgtagatgtt agtggagtta cgggaagggt
      601 tgctttagga aatatgtcag gaagcaacgt atctgtaaat gcaaactcta gcgcttcact
      661 aaaattagga aatatcgatg tcataaggac cgcgaccgtg aatgcaggtg ccatcgatgg
      721 agcagtagat ataggagatg tttatgcaaa aaccgcaaac atagatctat caaaaacact
      781 tggcaacgta tatgtaaata atataacagc agacacaatc agctataatg gttcaacact
      841 aaaatcaaac ggatatcatg gcgaactaaa tcttgcttct gctaagggca aagcattcac
      901 agctgtagta aacggcagtt taactaatga tcacataata gttaaagctt ctgatgctac
      961 tgaaagtata aaagtatcgg gaaatctaga tataggcaat gatatggcaa ctatacgctc
     1021 aggcaaaaaa acaaatagta taaatattag cgaattaaaa gctacaaatt tatttgaaac
     1081 tatatattta gataacacaa cagagtctaa cgtagccgta aaactaggta attttatttc
     1141 taatgtagtt tggaaattag attcatcttt aacaactgct aaactaagcg gcgatatggg
     1201 tacaggatca caaaataccg taatgataga taccagtaaa gctaaatatc ttacagctat
     1261 cgatatcagt gagcttgcgg gggaattcaa ttctataatt atgatggcgg gtgccaacac
     1321 tgaaattacc gaagtaaaag gtagtgaaaa aggtaatgat atactatatt ttaatgcaat
     1381 taattctgga gcggacttta ttaagcttac agatatagat cataatatag ataagatagc
     1441 cataggagga actcactcag ttaccgtagc ttacgcagct atagcagata aaacagtaga
     1501 tatgacaaat acagatttgc taatgttacc gcatatagag cagtcggaga tagttccgca
     1561 taataacaca ctcagtataa ttgcgggtga tacttactca tctataaatt tatctcatat
     1621 atacggacaa actaccgatc aagtaataac tacgcttaac actgctacta aaaccgttac
     1681 attaggaaac caagtacttg tcgatggtac gggcaacaaa gtaaccgata tcataaaagc
     1741 agatgccggc aaaggtatgg ttactataaa cggttttgat aaaacagctg ataagatcaa
     1801 ttttactaca gccgttaccg ataaaggtgg tttaacaaca gctacagtag ttaccggcgt
     1861 caagagtagc gatgacacaa acgacgtgca tataaaagtt gccgctggcg caacaggcgt
     1921 ggtttcgttc tttaaaggaa agtctggtgc tgaagcagat agcaatttcg ttgctacgga
     1981 cgcaaatatc ttaaatatag caaaagcttt aaatagtgca caagatagca caacaaaaga
     2041 tgcaacaaaa acagcgccta acggtgttta tatagtaaat gttgcgactg atggttatag
     2101 agaagcatat tcttatatca ttaacattgg tgctactaat gccgataccg atgatactat
     2161 aattaagata gcaggcgtcg ctgatatagc tatagctcaa gtgacacaaa taggaagagc
     2221 actaagcgaa caagcttaat ttctaaatta agctccttaa tagatagtat atggtttttt
     2281 gctaaaagaa gtcggaaaat ccgacttctt gagttatttt ataaatttat attttttaaa
     2341 tttaattaaa tttcgttaat taaatttagc ggttctattt ttttaaattt accaattatc
     2401 tattttattt taaatttaaa ctacaaataa gcataaacta tgtattatac tacttaaaaa
     2461 tataaaatat caggcagtat aatatgcaaa atatcattat aaaccaaaac aaacattgga
     2521 gcgaaccgta caaaaatcta tatgataggc aagtaatgcc taagcttata aactctctta
     2581 aactcaggca tattatggtt ttgcaaggta taaggcgtag cggaaaatcc actgtattta
     2641 aacttctaat aaatcatttg agtaagagcg tagatagcaa ggaaatactg tatatcaatc
     2701 tcgacgatcc gttttttagc acaaaaagta aagatgctag agtcataaac gatatagtaa
     2761 gtctttcgca aaggcttaca aataaacgcg taaaatatct atttttagat gaaataagcg
     2821 cggtaaataa ctgggaaaaa tatgtaaaaa gtgcgtacga ttctgaattg ttcgataaaa
     2881 tttttataac aggttcaaac tcggcacttt taaatacaca atacgctacg cttctgagcg
     2941 gacgctactt aagcacgcaa atttatccgc ttagttttaa agaaatttta aaaattaata
     3001 atataaacga ctatttcgag cttataaaag aaaaaaatca tgttttaaat ttagtacaag
     3061 atatggcgaa attcggatca tttgtcgaag tgtatgagag caacagtgaa tttaaacgcg
     3121 atattataag tagttattat gatgctattt tacttaaaga ttgcgtggca aataatcaga
     3181 taagagatat agctggattt agagaacttg gattttattc gcttactaat tttggagctt
     3241 tgtattcgta taattcgctt tcaaatgcag taaaactcaa tccaaaaagc gttcaagagt
     3301 atatagggta tttgcaagag tgctatcttt gtgacgaact aaagatgttt tcgtactcac
     3361 tcaaagagca gatgaataat aagaaaaagt tatatttgtg tgataacggc tttctgagtt
     3421 tagcatttag ttttagcgat aacaaaggac gagctttaga aaatttagta ttttgtgagt
     3481 tgaaaaaact aggttttgag ctattttttt acaaaactaa tgacagtgaa tgcgatttta
     3541 tcgcaagaaa aaatgacaaa agcatagcgt tacaagtctg ctatgagcta aatgaaaaaa
     3601 atataaaaag agagatagct ggtttaaata aacttccctt tggcgtgaat gaaaaatatc
     3661 tgataacatt tgatgataga tgggaaactg aattatcgca gttcaatctg cgtgatttgg
     3721 ggctaaattt ggataattat aagcatcggg attttccggg cggcgatgaa aatagcgaga
     3781 cgagagagaa atccaatgag aaaaagctaa aaattatgcc gttttatgag tttttcagcg
     3841 aatttaacga aacaacaaat ttagctttat agtttaaatt caaaacaatc tcttaataat
     3901 ctcttttaat gtttatcgtc ttatatattt atcaatttgt tttatcaatg attaatttat
     3961 caatttattt aacccattta tccttttata taattctttt aatcatctaa ttatattaat
     4021 actcctcttt ttcattccac cattataatt taaaataata ctttatttaa c
//
LOCUS       DAPPKW010000124         4028 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.124, whole genome shotgun sequence.
ACCESSION   DAPPKW010000124 DAPPKW010000000
VERSION     DAPPKW010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4028)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4028)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4028
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.124"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..635
                     /locus_tag="RPW04_001861"
     CDS             <1..635
                     /locus_tag="RPW04_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDX6295937.1"
                     /translation="VADIGAGSGNLSLMLDEIGLKVTAVEPNDAMRSIGEQRLPNVTW
                     VRANGTDTTLMEDKFDWVTFGSSFNVMDRNIALKEAHRILKKDGVMSAMWNHRDLNDP
                     IQKIAQDIIKSFIKDYSGGVRREDQRPILEAHSKLFKDIFYIEQDFYFHQSIENYILA
                     WKSVKNSFWDLETKEGSELFERICSKLRSELPKEFDIRYTTRAWSVTKVR"
     gene            632..2896
                     /locus_tag="RPW04_001862"
     CDS             632..2896
                     /locus_tag="RPW04_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295938.1"
                     /translation="MKFQTKARNLEILKPILKSAKILPLIIYKKKYIMSNLDFVMNEI
                     LSKFNTKLIVRSSSCLEDSSSSSHAGEFETLQSVTASNLKTALLDVASYLNDDDEIFI
                     QPMLENIEFFAVCMSALNYANYITISYDESGDSKNLTNGNGLFRTAVILKSHVSKNPK
                     FKKIICLINELENLYNNAFIDIEIAFSKNELYLLQVRPIVKNESKNLHDLTLIHDMIA
                     KKFEKLSLKRPHLLGDKTIFGIMPDWNPAEILGLRPKRLAISLYKELITDNIWAYGRD
                     NYGYKNLRSFPLMIDFAGLCYIDTRVSFNSFLPKSIDDKLGEKLVNHWLKKLENSPQN
                     HDKIEFEVILSSYEFDIDEKLKDMDNFSADEKTKIKNSLKNLTIDIISPKSRFYKDLE
                     RINELDKRVKELKSSNLASIDKIYWLIEECKRYGTLSFAGIARAAFIATSVLNSIARV
                     GAISQCEKNEFLNSLSTVSSSLARDINLLTKDDFLKIYGHLRVNTYDITSPRYDESFD
                     EYFTKNSKITNQNVSKKKPFKLKNTKPLNTLLKEHGFNIDAKELFEFLALAITSRESS
                     KFIFTKALSLALNEIKQYALKLGISNDDAAFLDIKTLLGFYTTLESLSAKELILSNIA
                     KNKAEFEITKSLNLPPLICNKDDIYEFILGENEPNFITQKSVQAMTASINDSDLNGKI
                     VCINSADPGYDFIFSKGIAGLITAYGGANSHMAVRSNEFGLPAAIGVGEDRFNIYKKA
                     KIITLDCLNKRIIV"
     gene            2893..3477
                     /locus_tag="RPW04_001863"
     CDS             2893..3477
                     /locus_tag="RPW04_001863"
                     /inference="COORDINATES: protein motif:HMM:NF012345.1"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HDX6295939.1"
                     /translation="MKVGVISKLIKSSYGETMQAIDLRFCPILEQNGFKTNLLIYGKT
                     PNLKELDAVIISGGNDLNSLISNDINAARDEFETIVLNECLKLNLPILGICKGAQSLA
                     NILGAKFKKIDNHVGVHEILWRNGKKFEVNSYHNWAIEYNLNGEILATSSDNTVEAFI
                     NNDKKIIGAMWHFEREETLSAASKEIFKIFKELK"
     gene            3474..>4028
                     /locus_tag="RPW04_001864"
     CDS             3474..>4028
                     /locus_tag="RPW04_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocholine cytidylyltransferase family
                     protein"
                     /protein_id="HDX6295940.1"
                     /translation="MKAIILAAGLGSRLEELTKDRPKCLVEYKNMPLISYQLNAFLKA
                     GINDIAVVGGYKFEVLKNYLNANFKKVKLYENTDFASSNMTYTMFCAREFMDDDTIIS
                     YSDIIYDYEFIELLKACKNELSVMVDKNWLELWKQRFSDPLSDAESMEIQDGFIKELG
                     KKVTHIDKIDAQYIGLFKFNKSFLS"
BASE COUNT         1558 a          601 c          740 g         1129 t
ORIGIN      
        1 gcgtagctga tatcggtgct ggaagcggaa atttaagtct tatgttagat gaaataggac
       61 taaaagtgac tgcagtagaa ccaaatgacg ccatgagaag tataggcgaa caacgtctgc
      121 caaatgtaac gtgggtaaga gcaaacggca ccgatacgac gctaatggaa gataaatttg
      181 attgggttac ttttggatct agctttaatg ttatggacag aaacatagca ctaaaagaag
      241 cacacagaat cctaaaaaaa gacggagtta tgagcgccat gtggaatcac agagatctaa
      301 atgaccctat acaaaaaata gcgcaagata ttataaaaag ctttatcaaa gattatagcg
      361 gcggagttag gcgtgaagat caaagaccga ttttagaagc ccattctaag ctttttaaag
      421 atatatttta catagagcaa gacttctact ttcatcaaag catagaaaac tatatcttag
      481 catggaaaag cgtaaaaaat agcttttggg atttagaaac aaaagaagga agcgaactat
      541 ttgaacgcat ctgctctaaa cttagaagcg aacttccaaa agagtttgac atacgctata
      601 ctacaagagc ttggagcgta acaaaagtaa gatgaaattt caaaccaaag ctagaaattt
      661 agagatccta aaaccgattt taaaatcagc taaaatactt ccgcttataa tctacaagaa
      721 gaaatatata atgtcaaatt tagattttgt tatgaatgaa attttatcta aatttaacac
      781 aaaattgatc gtaagaagtt catcttgttt agaagatagc agcagctcgt ctcacgcagg
      841 agagtttgaa actctccaaa gcgttactgc ttcaaattta aaaactgctc ttttagacgt
      901 agctagctat ttaaatgatg atgatgaaat ttttatccag ccgatgctag aaaatataga
      961 attttttgca gtttgcatga gcgctttaaa ctatgcaaat tacatcacta taagctatga
     1021 tgagagcggc gatagtaaaa atttaacaaa cggcaacgga ctttttagaa cggccgttat
     1081 attaaaatcc cacgtaagca aaaatcctaa atttaaaaaa ataatctgtt tgataaacga
     1141 acttgaaaat ctatataata acgcttttat agatatcgaa attgctttta gcaaaaacga
     1201 gctttatctt ttgcaagtac gtcctatagt caaaaatgaa agcaaaaatt tgcatgattt
     1261 aaccttgatc catgatatga tagctaaaaa atttgaaaaa cttagcttaa aacgccctca
     1321 tttgctagga gataaaacta tttttggcat tatgccagat tggaatccgg ccgaaatcct
     1381 aggactccgc ccaaaacgcc ttgctatcag cctttataag gagcttatca ctgataatat
     1441 ctgggcatac ggtagagaca attacggcta taaaaatcta cgttcatttc cgttaatgat
     1501 agattttgcg ggactttgct atatagatac aagagttagc tttaactcat ttttaccaaa
     1561 aagtatagac gataaactag gcgaaaaact agtaaatcac tggttaaaaa agttagaaaa
     1621 cagtccgcaa aaccatgata aaatcgaatt tgaggttatt ttaagctcat acgaattcga
     1681 tatagatgaa aaacttaaag atatggataa tttctcggca gatgaaaaga caaaaatcaa
     1741 aaactctcta aaaaatctta cgattgatat aataagccca aaaagtagat tttacaaaga
     1801 tttagagcgc ataaatgaac tagacaaaag agtaaaagag cttaaaagct caaatttagc
     1861 aagtatagat aaaatttatt ggcttattga agaatgcaaa agatacggca ctcttagttt
     1921 tgccggtata gcgcgcgctg catttatagc aacttctgtt ttgaactcca tagctagagt
     1981 aggagctata tcgcaatgtg aaaaaaacga gttcttgaac tcgcttagca cggtaagcag
     2041 cagtctagca agagatataa atttacttac aaaagatgat tttttaaaaa tctacgggca
     2101 tcttagagta aatacgtatg atataacgag ccctagatat gatgagagtt ttgatgagta
     2161 ttttacaaaa aacagtaaaa taacaaacca aaatgtctca aagaaaaaac cgtttaaatt
     2221 aaaaaataca aagccgctaa ataccttgct taaagagcat ggatttaaca tagacgccaa
     2281 agaacttttt gagttcttag ctcttgctat aacaagcaga gagagttcta agtttatatt
     2341 tactaaagca ctcagccttg cactaaatga gataaagcag tacgctttaa aactaggaat
     2401 tagcaatgat gatgctgcat ttttagatat aaaaacactg cttggatttt atacgactct
     2461 tgagagtttg tctgcaaaag agctaatact atcaaacatc gctaaaaaca aagccgaatt
     2521 tgaaataaca aaatcactta acttgcctcc gctcatttgc aataaagatg atatttatga
     2581 atttattcta ggtgaaaatg agccaaattt tataactcaa aagagcgtac aagcaatgac
     2641 cgcttcaata aatgatagtg atctaaacgg taaaatcgtc tgtataaatt cagccgatcc
     2701 cggatatgac tttatattta gtaaaggaat agccggcctg attacagctt atggaggagc
     2761 aaactcgcat atggcggtac gatcaaatga attcgggtta cccgcggcga taggagtcgg
     2821 cgaggataga tttaacatat ataaaaaagc aaaaattata acgctagatt gtctgaataa
     2881 aaggataata gtatgaaagt aggcgtaatt tcaaaactta taaaaagcag ttacggcgaa
     2941 actatgcaag ctatagattt aagattttgc cctattttgg aacaaaacgg ttttaaaact
     3001 aatttgctta tatatggaaa aactccgaat ttaaaagagc ttgacgcagt tataataagt
     3061 ggcggaaatg acttaaatag cttgatatca aacgatataa acgccgctag agatgagttt
     3121 gaaacaatag ttttaaatga gtgtttgaaa ctaaatttac ctattttagg catttgcaaa
     3181 ggtgctcaaa gtttagcaaa tatattagga gctaaattta aaaaaataga taatcacgta
     3241 ggagtccatg aaattttatg gcgaaacgga aaaaaatttg aagtaaattc atatcacaac
     3301 tgggctatag aatataactt aaacggtgaa atactcgcaa caagtagcga caatacggta
     3361 gaagcattta taaataacga taaaaaaata atcggcgcca tgtggcattt tgagagagaa
     3421 gagactctaa gtgcggctag taaggaaatt tttaaaatat ttaaggagct taaatgaaag
     3481 cgattattct tgcagcagga ctcggtagca gattagaaga actaacaaaa gataggccaa
     3541 aatgtttggt agaatataaa aatatgcctc ttataagcta tcaactaaac gcgtttttaa
     3601 aagccggaat aaacgatata gctgttgttg gagggtataa atttgaagtt ttgaaaaact
     3661 atttaaatgc aaattttaaa aaagtaaaac tctatgaaaa tacggatttt gctagttcaa
     3721 atatgaccta tacaatgttt tgcgctaggg aatttatgga tgatgataca atcataagct
     3781 actcggatat aatttatgat tatgagttta tagagctttt aaaagcatgc aaaaacgaac
     3841 tttctgttat ggtggataaa aattggctgg aactttggaa acagagattt agcgaccctt
     3901 taagcgacgc tgaaagtatg gaaatacaag atggatttat aaaagagctt ggtaaaaaag
     3961 taacgcatat agataaaata gatgctcagt acataggact ttttaaattt aacaaaagtt
     4021 ttttgagc
//
LOCUS       DAPPKW010000125         4025 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.125, whole genome shotgun sequence.
ACCESSION   DAPPKW010000125 DAPPKW010000000
VERSION     DAPPKW010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 4025)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4025)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4025
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.125"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            106..741
                     /locus_tag="RPW04_001865"
     CDS             106..741
                     /locus_tag="RPW04_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HDX6295941.1"
                     /translation="MKKIAILAANGKAGQAIVYEALSRGFNISAFIRNGLKQQFKDDI
                     KIVQKDIFSLNSENLEGFDYIIDAFGEWGDLNLHKKHIEHLCKILHNNRAKLVIVGGA
                     GSLYMDKNHSTMLIDMPNFPNEYKPLGKAMAEGLEFLRSENKINWLYVSPPADFIPDA
                     PKSGKYKIISEEFEVNDKGESKGSYKDYAAALLDAMLNYKLNRTRIGVIGL"
     gene            complement(845..1828)
                     /locus_tag="RPW04_001866"
     CDS             complement(845..1828)
                     /locus_tag="RPW04_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HDX6295942.1"
                     /translation="MQFGKAAVNYGKKIRDNKLQDIEFTKENISHKEQFVLKVSMYCA
                     LILAIFGIGFGLFVKSLTIVFDGIIALVSVGLGLLSVVTARYIYKEDDDIFQYGYIRF
                     EPMVNLFKSLILLVVCLYAFFSAIKSIFGGGYTLELGAAVIYTIVAFALCFIIFTYTS
                     FYSKYLGSELIYVDRAEWLIDCVLYCGGIIAFGLIYIFDPAQEKWFSPYIDPILLVLF
                     SIFLSVTPLKIFISNLKDLIMVAPKDLDDKITEIMQSLSLKYGFRDYDTHVAKSGRFF
                     IIEVNILSTSSNDILSVRELDCIRNEIEQRLEIPSYKIWLLVSLTANPKWL"
     gene            complement(2002..3663)
                     /locus_tag="RPW04_001867"
     CDS             complement(2002..3663)
                     /locus_tag="RPW04_001867"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012245.1,HMM:NF024140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCP four helix bundle domain-containing protein"
                     /protein_id="HDX6295943.1"
                     /translation="MSNLTTNLTTKTKLVVLSAILLLFTIISGTTAFMGFKKSNESIA
                     FIKEKNIDSVTHLEKLNIELLTLRIEVYKYIANIIDYDKLKQSANKYANVVDQFEKDY
                     PNTFSTADDEANFKIVLENAKIYKNTLMQAMGGGKDELLNKLLGLGSKISKGIVDTKS
                     VNEQSMQHTIEYMKNYLSLLTKTIIIIIAVSIIIGVILSIIITKSIKKSIDAILDGLT
                     SFFKFISGETDKPQIIPLVSKDEFGTMANIINNNIQSIKEGLLQDNRTIEESNLVIDS
                     LKKGTLSKTVTTKPHNAQLKELTNLLNEMIKEWHSMISTMQATLTSFSNKDFRARIEI
                     HGIQNDMLGLINGINYLGNEISGMLSSSLKNGQSLEQKSIQLKEYMQDLANQTKNQST
                     NVNESAAAIEQMSSSMNSVSNMANDVIRHSDDIKNIIVVIKDIADQTNLLALNAAIEA
                     ARAGEHGRGFAVVADEVRKLAERTQRSLSEIEANVNILSQSVNEVNQSINEQADAIRQ
                     INEAVTNIDETTKSNLEATNSTNDLANEISQMATTSVKEAKNSKW"
BASE COUNT         1380 a          615 c          562 g         1468 t
ORIGIN      
        1 aattataaaa aaatatctac ttgtttttta gaacttaaat ttattataat tctagcatta
       61 attttagtat gcaagttaaa aatacaaatt tatttaggtg atcatatgaa aaagatagct
      121 atattagccg caaacggtaa agcaggacaa gcaatcgttt atgaagcgtt aagtagaggt
      181 tttaacataa gcgcttttat acgaaatggt ttaaaacagc aattcaaaga cgatataaaa
      241 atcgtgcaaa aagatatttt ttctttaaat tcagaaaatt tggaaggatt tgattatata
      301 attgatgctt ttggagagtg gggagattta aatttgcata aaaaacacat agaacattta
      361 tgtaaaattt tacataataa tagggcaaag cttgttatag taggcggcgc aggaagttta
      421 tatatggata aaaatcattc aactatgctt atagatatgc caaatttccc aaacgaatac
      481 aaacctttag gaaaagctat ggctgaaggt ttagagtttt tacgcagtga aaacaagatt
      541 aattggttat atgtaagtcc tcctgccgat tttattccag atgccccaaa aagtggtaaa
      601 tacaaaatta taagcgaaga atttgaggta aatgacaaag gagagagcaa aggaagctac
      661 aaagattacg cagcagcttt acttgatgct atgttaaatt ataaactaaa tcgaacgcgc
      721 ataggcgtaa taggcttata aaatatacta tttatatatt aaataaaatc gcttcagcaa
      781 aacaagtcag attggagcga tttaaattta taaaacagca taaatttaaa tcaaaaacta
      841 tatcttataa ccattttgga ttagccgtta gactcactaa aagccaaatt ttatagctag
      901 gtatctcaag tctctgctct atctcattgc ggatacaatc taactctctt acgctaagta
      961 tatcattgct gctagtgctt aaaatattaa cttctataat aaaaaatcta ccgctttttg
     1021 caacgtgagt atcataatcc ctaaagccgt attttagact taaactctgc ataatttctg
     1081 ttattttatc atcaagatct ttaggagcca ccataattaa atctttaaga ttagatataa
     1141 aaatttttag cggcgtcaca gaaagaaaaa tcgaaaataa aacaagcaaa ataggatcta
     1201 tataaggact aaaccacttt tcttgggcag gatcaaagat atagatcaaa ccaaaagcta
     1261 taatgcctcc acagtataaa acgcaatcta taagccactc tgctctatct acgtaaataa
     1321 gttcggaacc taaatattta gaataaaaac ttgtataagt aaaaattata aagcacaagg
     1381 caaaagcaac tatagtataa atcacagccg cgccaagctc caaagtataa cctccgccaa
     1441 aaatgctttt aattgcacta aaaaatgcat acaaacatac aacaagcaaa ataagacttt
     1501 taaataaatt taccataggc tcaaaacgaa tatatccgta ttgaaaaata tcatcgtctt
     1561 ctttataaat ataacgagca gtaaccacgc taagaagtcc aagcccaacg cttacaagag
     1621 ctataattcc atcaaaaact atggtcaaac tctttacgaa tagtccaaaa cctataccaa
     1681 aaattgctaa aataagtgcg caatacatag aaactttgag cacaaactgc tctttatggc
     1741 taatattttc ttttgtaaat tcaatatctt gaagtttatt atctcttatc tttttaccgt
     1801 aatttaccgc agctttgcca aattgcatca actctccttt atgagtactt ttaacattgt
     1861 agcaaattta gcattagtat tttttaaaaa gatttaaata cgattttaaa tatatttatt
     1921 ttatatattt taaatttttc caatgtagcg tatagattgt tttaaattta aagcctcata
     1981 aaaaggcttt aaatcttaaa tttaccattt gctgttttta gcttctttta ccgaagtagt
     2041 tgccatttga cttatttcat ttgcaagatc atttgtgcta tttgtagctt ctaagtttga
     2101 tttggtagtt tcatctatat ttgtaacggc ttcatttatc tgccttatag catctgcttg
     2161 ttcgtttatg ctttgattta cttcatttac gctttgagat agtatattaa catttgcttc
     2221 tatctcactt agtgagcgtt gagttctttc agctagtttt cttacttcat ctgcaacaac
     2281 tgcaaatcct cttccgtgtt ctccggctct agctgcttct atagctgcat ttaatgctag
     2341 taagtttgtt tgatctgcta tatcttttat tactactatg atatttttta tatcatcact
     2401 atgtcttata acatcatttg ccatatttga tacagagttc atagagctac tcatctgttc
     2461 tatagctgca gcactctcat ttacattagt agattgattt ttagtttgat ttgctaagtc
     2521 ttgcatatac tcttttaact gaattgattt ttgctctaga ctttggccgt tttttaagct
     2581 actacttaac ataccagata tttcatttcc taaatagttt ataccgttta taagtcctaa
     2641 catatcgttt tgtataccgt gtatctctat tctagctcta aagtctttat ttgaaaaact
     2701 agttagagta gcttgcatag tagatatcat agagtgccac tcttttatca tctcatttaa
     2761 taaattcgta agctctttta gctgagcatt gtgaggtttg gttgtaactg ttttactaag
     2821 agtacctttt ttaagagagt ctattacaag attgctctct tctattgttc tattatcttg
     2881 caagagtcct tctttgatgc tttgtatgtt gttgttgatt atatttgcca tagttccaaa
     2941 ctcgtctttt gagacgaggg gaataatttg aggtttatcc gtctctcctg agataaattt
     3001 aaaaaacgat gttaaaccat ctaatatagc gtctatagat tttttgatag atttagttat
     3061 gattatagat aatatcacac ctattattat agacacagct ataataataa ttattgtttt
     3121 ggttagtaaa gatagatagt ttttcatata ttcgatagta tgctgcatag attgctcgtt
     3181 aacgcttttg gtatcaacta tgcctttaga tattttactt ccgagtccaa gaagcttgtt
     3241 taataattcg tccttacccc cccccatagc ttgcataagt gtatttttat atattttagc
     3301 attttctaaa actattttaa aattagcctc atcatctgct gttgaaaacg tatttgggta
     3361 atctttttca aactgatcaa cgacatttgc atacttattt gccgattgct ttaatttgtc
     3421 ataatctatt atattagcaa tgtatttata cacttcaatt cttaatgtaa gtagttcgat
     3481 atttaacttt tctaaatgcg ttacggaatc aatatttttt tctttgataa aagctataga
     3541 ctcatttgat ttcttaaatc ccataaatgc cgtagttccg gatattatag taaataaaag
     3601 aagaatagcc gatagcacca caagtttagt tttggtagtt aagttagtag ttaaatttga
     3661 catattttac ctttcaattt tattttctgt ttatcatatt acgtactaaa tttaatgtag
     3721 atatatttaa attttgtata ttttataaaa atatatctta taatttaatt aatatattat
     3781 aataataatt catatttact atgattttac aaatttctaa catctaaatt aaatttgttt
     3841 aaagatttta taattgattg atatataaaa tttaatattt gacagcaaat ttgtaagtgc
     3901 aaatgaaaga aaataaaata ggccaattaa gataataaaa aaataccgat tgatgctaaa
     3961 aatggagata tattaaagat tatatttaaa aatatgcagt ggtgggttca ccaggactat
     4021 caaat
//
LOCUS       DAPPKW010000126         3993 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.126, whole genome shotgun sequence.
ACCESSION   DAPPKW010000126 DAPPKW010000000
VERSION     DAPPKW010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3993)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3993)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3993
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.126"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..707
                     /gene="lnt"
                     /locus_tag="RPW04_001868"
     CDS             <1..707
                     /gene="lnt"
                     /locus_tag="RPW04_001868"
                     /inference="COORDINATES: protein motif:HMM:TIGR00546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HDX6295944.1"
                     /translation="ILLFLNLNSKTSPNLLPFNVELVHTNVPQSKKWERSLRSKFIDE
                     NLLLIDKAIEKNASLIVFPESAFPLFLDHQPELLDILKQKSNNIAIVAGALGYENNMS
                     YNAAYVLQNGNVQRLDKVVLVPFGEEIPLPEFFKNLINNIFFGGKKDFERATSVSDYE
                     ILGVKIRSAICYEASRDELYENSPKFMIAITNNGWFVPSTEPKLQEKLLKYYSFKHKT
                     TIYHSVNGSKSEIITP"
     gene            complement(694..1509)
                     /locus_tag="RPW04_001869"
     CDS             complement(694..1509)
                     /locus_tag="RPW04_001869"
                     /inference="COORDINATES: protein motif:HMM:NF013143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDX6295945.1"
                     /translation="MIEFLLEPLRYDFMQIALFMAFGVSIVCAVLSCFLVLKSYSLLG
                     DALSHSVMPGMILSYAAGLPLGVGAFISSLGCLWIIEFLKQRSGLKNDAIIGMSFTGF
                     FAFGLLLYSKVESPLHVNEILFGNLLGVSASSMQNSLVVFAMVLIVILLFFRRFFTVF
                     FDEVNARLVGLNPKNYYYLMLLILSFVVVFGFSAVGIILVVAMLILPGAAAFLVTSKF
                     WMMQICAVSFAIFSSLFGIIVSFHMDSSTQALIVLAQTLIFVFCLAYSKIKAL"
     gene            complement(1490..2314)
                     /locus_tag="RPW04_001870"
     CDS             complement(1490..2314)
                     /locus_tag="RPW04_001870"
                     /inference="COORDINATES: protein motif:HMM:NF013143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDX6295946.1"
                     /translation="MEWLIEPFNYSYIVKAHIVSLFLCAFCGFLSCFLILKSYSLLAD
                     ALSHSVTPGVVIAYMMSFSYTISSFICGLFALCSMGLVSRSSKLKTDTIIGVTFSSFF
                     ALSLFLVSIYPVSIKLETVFLGDVLSLNDSEVYELIFLIFILFLFLIFSYQKIKFIFF
                     DELGASSVGINVKFYKILFFMLLCFCTVASLKTVGAILVTAMLITPAASASMISFKFN
                     QRVILATLFAGFSGFFGVYISYFLDTYASAMIVLTQILIFIVCFLYKRIVYDRVFA"
     gene            complement(2289..3131)
                     /locus_tag="RPW04_001871"
     CDS             complement(2289..3131)
                     /locus_tag="RPW04_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HDX6295947.1"
                     /translation="MKKISLDVSNLNVRYADVVALEDINFSLEGGNICALIGTNGSGK
                     STLFKSIMGVIKPKGSVIKICGLSLNDAIKNSLITYVPQNEEIDFDFPISVWELVMMG
                     RYAHMGFFKNPKQSDKIAVEDALKKVDMYEFKDRQISKLSGGQKKRIFIARSLASDAK
                     IILLDEPFNGVDAKTESMILDLLIKLRSSGNLILISTHNLGMAAQYCNRAILLKHKIL
                     AYGFTNDVLTPENLSQVFGGSLRHFKIEVDDMSCNIALISDDEKPLIVVDEKVQDGMV
                     NRAF"
     gene            complement(3118..3990)
                     /locus_tag="RPW04_001872"
     CDS             complement(3118..3990)
                     /locus_tag="RPW04_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HDX6295948.1"
                     /translation="MKKISIFIFVIAMIGSLNAQKLEVLTSFTILADIAKNVAKDSAN
                     VNSLTKMGTEIHGYEATPKDILKAKKADIILYNGLNLELWMDKFLSNAKKPSYNLSDG
                     VTPIFISDGGYKGKPNPHAWMSIKNVQIYIKNIVEIFSRHDPKNADIYAKNADEYIKI
                     LNDLDSKFKAEFAKVPLEQRYLITSEGAFSYLTKEYDLKELYIWSVNSDEQGTTKQIK
                     NLVDKIKNSEAKVIFSESTISPKPAMTIANESGIRYGGVLYVDSLSKEIPTYVDLMKT
                     TVSTIINGLNNEKN"
BASE COUNT         1477 a          737 c          544 g         1235 t
ORIGIN      
        1 ttatacttct ttttttaaat ttaaatagca aaactagtcc aaatttactg ccttttaatg
       61 tagaactagt acatacgaat gttcctcaaa gtaaaaaatg ggagcgaagt ttaagatcta
      121 aatttataga tgaaaatctg ctgttaatag acaaagctat agaaaaaaac gctagtttaa
      181 tcgtatttcc agaaagtgcg tttcctctat ttttggatca tcagcccgag ctactagata
      241 ttttaaaaca aaaatcaaat aatatagcca tagtagcagg agctctagga tatgaaaata
      301 atatgtcgta taatgcagct tacgtgcttc aaaacgggaa tgtacaaaga cttgataaag
      361 tagttttagt gccttttggt gaggaaattc cacttcctga gtttttcaaa aatttaataa
      421 ataatatatt ttttggaggc aaaaaagact tcgaaagagc tactagcgta agcgactacg
      481 agatattggg agtgaaaata agaagcgcaa tatgttatga ggctagtaga gatgaattat
      541 acgaaaactc gcctaaattt atgatagcaa ttacgaataa cggttggttt gtcccctcaa
      601 cagagccaaa actgcaggaa aaactactaa aatactattc ttttaagcat aaaactacta
      661 tttatcacag tgtaaatggt agcaaaagtg aaatcataac gccttaatct ttgaatacgc
      721 aagacaaaat acaaatatca aagtctgagc taaaactata agagcttgag tactagagtc
      781 catatgaaag ctcactataa taccaaaaag tgaactaaaa atagcaaaac taaccgcaca
      841 aatttgcatc atccaaaatt tactagttac taaaaatgca gcagctccag gtaaaatcag
      901 catagccaca actagtataa ttccaaccgc actaaaacca aaaacaacta caaagctaag
      961 tatcaaaagc attaaatagt agtaattttt tggatttaat ccaactaatc tcgcatttac
     1021 ttcatcaaaa aaaacagtaa aaaatcttct aaaaaataga agaatcacaa tcaaaaccat
     1081 tgcaaaaact acaagtgaat tttgcatact actagcacta actccgagca aatttccaaa
     1141 taaaatctca tttacatgca aaggactctc tactttacta taaagcaaaa gtccaaaagc
     1201 aaaaaatccg gtaaaactca tacctatgat agcatcattt ttaagaccgc ttctttgttt
     1261 taaaaactca attatccaca agcagccaag gctagatata aatgccccta ctccaagagg
     1321 aagaccagca gcgtaagata gtatcattcc tggcattaca gagtgagaga gtgcatctcc
     1381 tagtaaggag taggacttta aaaccaagaa acaagacaaa actgcgcata caatgcttac
     1441 tccaaatgcc ataaaaaggg ctatttgcat aaaatcatat cttaaaggtt caagcaaaaa
     1501 ctctatcata aactatcctt ttatataaaa aacagacgat aaaaatcaaa atctgagtta
     1561 aaactatcat agcagaggcg taagtatcta aaaaatagct gatataaact ccaaaaaatc
     1621 cactaaatcc ggcaaataat gtagctaaaa tcactctttg gttaaattta aaactaatca
     1681 tagaagcgct cgcagcagga gtgattaaca tagcagttac caaaatagct ccaaccgttt
     1741 ttaaactagc aacggtacaa aaacagagta acataaaaaa taaaatctta taaaatttaa
     1801 catttatacc aacactacta gcacctagct catcaaaaaa tataaattta atcttttgat
     1861 aactaaaaat aagaaataaa aatagtataa atataagaaa tataagctca taaacttcgc
     1921 tatcatttaa actcaaaaca tcgcctaaaa atacggtttc gagctttata gaaaccggat
     1981 aaatcgaaac caaaaacaga ctaagagcaa aaaacgatga gaaagtcact cctattatcg
     2041 tatctgtttt tagctttgaa ctgcgcgaca ctaaacccat actacaaagt gcaaacaaac
     2101 cacatataaa gctagaaata gtataagaaa aactcatcat atatgctata actactcctg
     2161 gtgttacgct gtgagagaga gcgtcagcta atagagaata ggactttaag atcaaaaaac
     2221 aagataaaaa cccacaaaaa gcgcataaaa acagacttac gatgtgcgct tttactatat
     2281 atgagtaatt aaaaggctct attaaccatt ccatcttgca ccttttcatc taccactata
     2341 agcggttttt catcgtcgct tataagcgct atattacaac tcatatcgtc gacttctatc
     2401 ttaaaatgtc ttaaacttcc gccaaaaacc tgactgagat tttcaggagt taaaacatcg
     2461 ttcgtaaatc cgtaagccaa gatcttatgt ttaagaagta tcgctctatt gcaatactga
     2521 gcagccattc caagattatg agtagatata agaataagat ttccacttga acgaagtttt
     2581 ataagaagat ctagtatcat actctcggtt tttgcatcaa ctccattaaa aggttcgtct
     2641 aaaagtatga ttttagcatc gctggccaaa gatcttgcta taaatatacg ctttttttga
     2701 ccaccgctta atttagaaat ttgacgatct ttaaactcat acatatctac tttttttaaa
     2761 gcatcttcta ctgctatttt atcactctgt tttggatttt taaaaaatcc catatgagca
     2821 tatctgccca tcattacaag ctcccatacg cttataggaa agtcaaagtc tatctcttca
     2881 ttttgaggaa cgtatgttat gagactattt tttatcgcat cattaagact taaaccgcat
     2941 atttttataa ctgagccttt tggctttatt actcccatta tagacttaaa aagagttgat
     3001 ttaccgcttc cgtttgtacc gataagagcg catatgtttc caccttctaa actaaagttt
     3061 atatcttcta aagccactac atcagcatat ctgacattca aatttgaaac atctaagcta
     3121 atttttttca ttatttaatc cgtttataat agtcgaaacc gtagttttca taagatctac
     3181 ataagtagga atttctttac ttagactatc tacataaagc actccgccgt atctaattcc
     3241 actctcgttt gctatagtca tagcaggttt tggactaata gtgctctcac taaaaatcac
     3301 cttcgcttca gaatttttta tcttatcaac taagtttttt atctgtttag tagtgccttg
     3361 ctcatcgcta tttacactcc atatataaag ttcttttaga tcatactcct tagttaaata
     3421 actaaaagcg ccttcacttg ttataagata tctttgttca agcggaactt tggcaaactc
     3481 ggctttaaat ttagagtcta aatcatttaa aatttttata tactcatctg cgtttttagc
     3541 atagatatca gcattttttg gatcatgcct actaaaaatt tctacgatat ttttaatgta
     3601 aatttgaaca tttttgatac tcatccacgc atgagggttt ggtttgcctt tgtatcctcc
     3661 atcgcttata aaaataggag tgacaccatc acttagatta taactaggtt tttttgcatt
     3721 gctcaaaaac ttatccatcc aaagctctaa atttaaacca ttataaagaa tgatatcagc
     3781 ttttttagct tttaaaatat cttttggagt tgcttcatat ccatgtatct ctgtgcccat
     3841 ttttgtcaaa ctatttacat tagcactatc ttttgcaaca ttttttgcga tatctgctag
     3901 tatcgtaaaa ctagttaaaa cctcaagctt ttgtgcattt aaagaaccaa tcattgctat
     3961 tacaaatata aaaatagata tttttttcat att
//
LOCUS       DAPPKW010000127         3880 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.127, whole genome shotgun sequence.
ACCESSION   DAPPKW010000127 DAPPKW010000000
VERSION     DAPPKW010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3880)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3880)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3880
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.127"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            159..665
                     /gene="petA"
                     /locus_tag="RPW04_001873"
     CDS             159..665
                     /gene="petA"
                     /locus_tag="RPW04_001873"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HDX6295949.1"
                     /translation="MSVDKQERRDFIGMAFGAVAAVGGVFALVGMKKTWDPLPSVKAA
                     GFTIVDLSPMQAGEFRQVEWRKKPIFIIKKDAQMKANPARDVVIGEDKYMLAIGLCTH
                     LGCIPSWSASDKIFKCACHGGEFDSSGVNTFGPPPRPLDIPPFKIDGTKLVLGEEGPE
                     YKKLVGIA"
     gene            676..1923
                     /locus_tag="RPW04_001874"
     CDS             676..1923
                     /locus_tag="RPW04_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HDX6295950.1"
                     /translation="MAHITKATSVRDWFDQRIAITKLWNVLAGQYWIPKNINFLWAMG
                     VILTVLFTILFITGLLLVMYYKPDANLAFDSVNYTIMKEVEYGWLWRHMHAVAASVIF
                     LILYIHAFVGIYYGSYKKGREMIWISGMLLFLIFSAEAFSGYMLPWGQMSYWAAQVIT
                     QLFGGIPIIGDAVVEWIRGDYAVSDPTLTRFFMLHVCLLPIVIIMVIAIHFYTLRIPH
                     VNNLEGEEIDFELEAEKYLNGNKKESKVIAFWPDFLSKDFMYISFFMIFFFYLVSFHF
                     GFAMDPINFDPANAAKTPPHIYPEWYFLWQYEILRGFFFDIGPLKAADIGLLAFSFAG
                     ISLFFMPLYDRSDVVAPAHKRKGFFIWFWLLIIDLIILTVYGKLPPTGFNAWIGFFSS
                     IAYLLLLLVVLPIVTIMERKGNK"
     gene            1920..2945
                     /locus_tag="RPW04_001875"
     CDS             1920..2945
                     /locus_tag="RPW04_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HDX6295951.1"
                     /translation="MKELKAFIVVVIVTGVIYWGVEPYAHSVMNPHVEPANFDFAAED
                     IGLAKVDVAKAEAALETAKSRNNPEAIESAQKVLDSAKANLEKYSNFWADINSIDLAK
                     GSAKTGEELIAAAGCNACHGIKSANMPAPMDDKTASESFGVAPPDLSDIGYLYDGKFL
                     AALIKDPVLALKLSHKFSDEQPFPMTPFMGAGGDLNQEIADLVAYFKSIAPKEMSDRD
                     VFVNACARCHDMKYTNIFANGNKQSIQTYLGTTPPDLSMYIRSRSVDYLNNFINDTQK
                     MLPGTSMPRVGLNKEAQQQVMAYMNEAGDSKKAERESIGIYIMIYFLILGGFALLWKK
                     KIWSKLH"
     gene            complement(3037..3744)
                     /locus_tag="RPW04_001876"
     CDS             complement(3037..3744)
                     /locus_tag="RPW04_001876"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295952.1"
                     /translation="MIVLKILLQLKSGFHLRKMPDFLFKNVNLPLLNNDEIPKFTYNE
                     EINPYSFGFLYPLKFKTKLYEAGDLYNLNIKCNSDSVANHIKQVLTKNLNNGFVLIDI
                     EKKFINRSSYIHSIYTASPAVFAFSNLENQFWTMKNSNLDTLKTLCIDDLVKKLKHFE
                     SKNITANLNDILSIEILSNKPLVFEHEKHTVFSHKMKIYFSQSSSAGELSKAAMKYSI
                     GDKNYLGFGYCVRGMSD"
BASE COUNT         1290 a          618 c          716 g         1256 t
ORIGIN      
        1 taaaatgata aaattacaag ttgtcaagtg gttttcgctt ctttatttag caaactatta
       61 tgctaaataa aaaacttaaa tttaagctct ccacttactc atcaaatatt tttaaatttg
      121 attaaaaaat atatatcaat caaattgaaa ggaaagaaat gtctgtagac aagcaagaaa
      181 gacgggattt catcggcatg gcatttggtg ccgttgctgc agtaggcggt gtctttgctc
      241 ttgttggtat gaaaaagact tgggatccgc ttcctagcgt aaaagcagct ggatttacga
      301 ttgtagattt aagccctatg caagccggag agttccgtca agtcgagtgg cgtaaaaaac
      361 cgattttcat catcaaaaaa gatgcacaga tgaaagcaaa cccggctaga gatgtagtta
      421 tcggggaaga taaatatatg ttggctatag ggctttgcac acaccttggc tgtattccta
      481 gctggagcgc gagcgataag atatttaaat gtgcgtgcca cggtggagag tttgactcaa
      541 gcggagttaa tacttttgga ccgccacctc gtccattaga tatcccgcca tttaaaatag
      601 acggcacaaa acttgtttta ggcgaagaag gtcctgaata caagaaactt gtcggcatag
      661 cgtaaggggg ataaaatggc acatattaca aaagctacaa gcgttcgcga ttggtttgat
      721 caaagaatcg caattacgaa attatggaat gttcttgctg gtcagtattg gattccgaaa
      781 aatataaatt ttctttgggc tatgggtgtt atactcacgg tactatttac tatattattt
      841 ataaccggac ttctgctagt tatgtactat aaaccagatg caaatttagc atttgatagc
      901 gtaaattata ctatcatgaa agaagttgag tatggttggc tatggcgtca tatgcacgca
      961 gtagcggctt cggttatatt tttaattctt tatatccacg catttgttgg aatttattac
     1021 ggttcttata aaaaagggcg tgagatgata tggataagcg gaatgttgct tttccttata
     1081 ttctcagctg aagcatttag cggatatatg cttccttggg gtcaaatgag ttactgggct
     1141 gcgcaagtta tcactcagct atttggcggt attccgatca ttggagacgc tgttgtagaa
     1201 tggataagag gcgattacgc ggttagcgat cctacgctta ctagattttt tatgctgcac
     1261 gtatgtttgc ttcctatagt catcataatg gttatagcta tccactttta tactttaaga
     1321 atacctcacg taaataactt agaaggcgaa gagatagatt ttgaacttga agcagaaaaa
     1381 tatctaaatg gaaataaaaa agaatcaaaa gttatagcat tttggccaga ttttttaagt
     1441 aaagatttta tgtatatatc attttttatg atattctttt tctacttagt aagcttccac
     1501 ttcggctttg ctatggatcc tataaatttc gatccggcaa acgctgcaaa aactccacct
     1561 catatatatc ctgagtggta tttcttatgg caatatgaaa ttttacgtgg gtttttcttt
     1621 gatattggac ctttaaaagc tgctgatata ggattgcttg cattttcatt tgctggtatt
     1681 tcactatttt ttatgcctct ttatgataga agcgatgttg ttgctccagc acataaaaga
     1741 aaaggctttt ttatatggtt ttggctgcta ataatcgacc taataatcct aacagtatac
     1801 ggaaaacttc ctccaacggg atttaatgct tggataggat ttttctcttc tatagcgtat
     1861 ttactattgc ttttagtagt acttcctatt gttactatta tggaaagaaa ggggaataaa
     1921 tgaaagagtt aaaggcgttt attgtagtag ttatagtcac tggcgtaatc tactggggag
     1981 ttgagcctta tgcacattca gttatgaacc cgcatgtaga acctgcaaat ttcgattttg
     2041 ctgctgaaga tataggatta gcaaaagttg atgttgctaa agctgaggct gcactagaaa
     2101 ctgcaaaatc aagaaataat ccagaagcca tagaatcagc gcaaaaagta ctagactctg
     2161 ctaaagcaaa tttagaaaaa tacagcaact tctgggcgga tataaactct attgatctag
     2221 caaaaggcag tgctaaaaca ggagaagaac taatcgctgc tgccgggtgt aatgcatgtc
     2281 acgggataaa atccgcaaat atgccggctc ctatggatga caaaacagct agtgaaagtt
     2341 ttggagtagc gcctccagat cttagcgata taggatatct atatgatgga aaattcctag
     2401 ccgcacttat aaaagatccg gtattagcac tgaaactaag ccataaattt agcgatgagc
     2461 aaccatttcc tatgactccg tttatgggtg ctggcggcga tctgaatcaa gaaatagccg
     2521 accttgtggc ttactttaaa agtatagctc caaaagagat gagcgataga gatgtatttg
     2581 taaatgcttg tgcaagatgt catgatatga aatatacaaa catatttgca aatggcaata
     2641 aacagagcat acaaacatat ttaggtacaa cccctcctga tctttctatg tatataagat
     2701 caagaagcgt ggattatcta aataacttta ttaatgacac tcaaaagatg ttgcctggta
     2761 cttcaatgcc tcgtgtagga ctaaataaag aagctcaaca gcaagttatg gcatatatga
     2821 acgaagctgg agatagcaaa aaagcagaac gcgaaagtat aggtatatat ataatgatat
     2881 atttcttgat actaggtgga tttgctctac tttggaaaaa gaaaatttgg tctaaactcc
     2941 attaagaatt ttgcccctaa aaagggcaaa attcactctt aaatttaaca ctaccgaaaa
     3001 ttaatttatc taatctataa atttaaaata tcaaaatcaa tcactcatac ctcgtacgca
     3061 atacccaaat ccaagatagt ttttgtctcc tattgagtat ttcatagcag cttttgaaag
     3121 ctcgccggcg ctactacttt gcgaaaaata tatcttcatc ttgtgagaaa aaacagtatg
     3181 tttttcatgt tcaaagacaa gaggtttatt tgataaaatt tctatcgata atatatcatt
     3241 taaattagcg gttatatttt ttgactcaaa atgttttaac ttcttgacca aatcatcgat
     3301 acaaagagtt ttaagggtat ctaaatttga atttttcata gtccaaaact gattttctaa
     3361 atttgaaaat gcaaaaaccg caggactagc cgtatagata ctatgtatat aagatgatct
     3421 atttataaac tttttttcta tatctatgag aacaaaaccg ttattaagat tttttgtaag
     3481 cacctgcttt atatggtttg caacgctatc tgaattgcat tttatattta aattatacaa
     3541 atctccagct tcatagagtt ttgttttaaa ttttaaagga tataaaaaac caaaactata
     3601 tggatttatc tcttcgttat aagtaaattt tggaatctcg tcattattta aaagaggcaa
     3661 attaacattt ttaaataaaa aatcaggcat ttttcttaga tgaaaaccgc tcttaagttg
     3721 caataaaatt tttaacacaa tcatcataaa tcctttatga ttttttacat agtagcagat
     3781 aattagaaaa aaaagtgttt atttaacata aaagttataa tattataata aaatgtgtat
     3841 ttacgtaact aattaaattt aaatttataa attgctatcc
//
LOCUS       DAPPKW010000128         3871 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.128, whole genome shotgun sequence.
ACCESSION   DAPPKW010000128 DAPPKW010000000
VERSION     DAPPKW010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3871
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.128"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..1362
                     /locus_tag="RPW04_001877"
     CDS             <1..1362
                     /locus_tag="RPW04_001877"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295953.1"
                     /translation="KKKYGFQCYQIAIHRDEGHKNENGEIVPNLHAHLEFITLDRETG
                     KQNFKMRDFTKQVMREIQSETAEILQMQRGQDKRLSGAKRIKPREYARQKEAEKKTIK
                     EATQDLKKQIKKKEQELEAERLTSKEALQELEAIRKEMKRQGFTKEQFAHINELKKGI
                     KEKTAEPMTRQDIEQLKEQVKNQSGIFSKKNNVIDALTKKLTEAENDKAVLNQIVIFT
                     EQNEAKIIETIRQELENENKAVLERLKYEQETQLKTENEKFKSNLRYELVQETNKLAV
                     SRTSYESKTNDLATAEAKAKEAEISYTRKRQELTQSSIIQELTNSYEARLKAEQEKQA
                     KLEEQNENLKLDNERLRMLNEFAMEMKEKAEQELKEIKKRLQNITEAVERAVKGSWQI
                     VYDRSAYGFKSAHIKLKEFFNKEPQEQERIINSNIQAHKDIEQEKQEKNIEREKKSRS
                     FKM"
     gene            1743..2819
                     /locus_tag="RPW04_001878"
     CDS             1743..2819
                     /locus_tag="RPW04_001878"
                     /inference="COORDINATES: protein motif:HMM:NF013235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HDX6295954.1"
                     /translation="MKEIVKYHNDFNKISLPSFSSQEQNILMGILCKIKERKSDENII
                     FYSDELLEYSTENLTKKSLMSVINILSDKFFKADFKILLKDEEKKIYKNIRFNLFTEF
                     CIKSYDEEVTDIISIELGVNPRFAYLIGELTANFTSFELKEFIGISGKYSKTLYRLLK
                     QFRNSGKCIIYSKKWDEFRDFMDIPESYLPHHIDQRVLNPAVKELSAERDLFNNKKSI
                     FKNLTYKKIKDPKGRGRGGKVIGIEFYFTPEPNRSELQEQIKDLKSLNTEPKETKNQE
                     PKKLKTRTDLFGNQVNDLDSYINRHFKVKNKFDGGYDSCKIKELYQNSNGKIQGIAIN
                     QENNKTFDLNFESLEHLKNSLRIK"
     gene            3038..3313
                     /locus_tag="RPW04_001879"
     CDS             3038..3313
                     /locus_tag="RPW04_001879"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295955.1"
                     /translation="MATAITYEKYEYMTKRQIFTALLNAEKKFEKMKSDLESQKDLVN
                     FLKAKSKKKIDEKEISIPALDEAIAEYQSGKVEKFKTFDEFERSLDA"
     gene            3306..3578
                     /locus_tag="RPW04_001880"
     CDS             3306..3578
                     /locus_tag="RPW04_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system YafQ family
                     toxin"
                     /protein_id="HDX6295956.1"
                     /translation="MLELSYATAFKKAYKKLNLEDQTLTKEVIKKISNGEKLEKKHCD
                     HDLKGKYVGYRECHIKPDLLLIYKINKDILELYLSAVGSHSELFGK"
     gene            3581..>3871
                     /locus_tag="RPW04_001881"
     CDS             3581..>3871
                     /locus_tag="RPW04_001881"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
                     /protein_id="HDX6295957.1"
                     /translation="MGYISSINFEKSIAINTEHNDRTLAPSYLIDTEKGAECNRTAES
                     ARALKNQIIAKAKENYTQNTGQKFQAKSYEWSAVCNIKPETTMQDLEKLAEHF"
BASE COUNT         1722 a          547 c          658 g          944 t
ORIGIN      
        1 aaaaaaaaat atggatttca atgctatcaa atcgccatac atagggatga aggacacaaa
       61 aacgaaaacg gcgaaatagt gccaaattta cacgcacact tagaattcat aacacttgac
      121 agagaaacgg gcaaacagaa ttttaaaatg cgagatttca caaagcaagt aatgcgagaa
      181 atccaaagcg aaacagccga aattttgcaa atgcaaaggg ggcaagataa gagattaagt
      241 ggagcaaaac gcataaagcc aagagaatac gcaaggcaaa aggaagccga gaaaaaaacc
      301 ataaaagaag ccacgcaaga tttaaaaaaa caaattaaaa aaaaagaaca agaactagaa
      361 gccgagcgac tgacaagcaa agaagcatta caagagctag aagcgattag aaaagaaatg
      421 aaaaggcaag gatttacaaa agagcaattc gcacatataa acgaactaaa aaaggggata
      481 aaagaaaaaa ccgcagagcc tatgacacgc caagacatag agcagttaaa agagcaagta
      541 aaaaatcaga gtggaatttt tagcaaaaaa aacaatgtta tagacgcttt aaccaaaaaa
      601 ttaaccgaag ccgaaaacga taaagccgtt ttaaatcaaa ttgtgatctt tacagagcaa
      661 aacgaagcta aaatcataga aactataagg caagagctag aaaacgaaaa taaagccgtt
      721 ttagagcgtt taaaatatga acaagaaaca cagctaaaaa cagaaaacga aaaatttaaa
      781 tcaaatttgc gatatgaact agtgcaagaa acaaataaat tagcagtaag tagaacaagt
      841 tacgagagta aaacaaacga tttggcaaca gcagaagcca aagccaaaga agcagaaata
      901 agctatacac gcaaaagaca agagctaaca caaagcagta taatacaaga gcttacaaac
      961 tcatacgaag caagactaaa agcagaacaa gaaaaacaag ctaagctaga agaacaaaac
     1021 gaaaatctaa aattagataa tgaaagacta agaatgctta acgaattcgc tatggagatg
     1081 aaagaaaaag cagaacaaga attaaaagaa attaaaaagc gattacaaaa cattaccgaa
     1141 gcagtagaaa gagccgtaaa aggaagttgg caaattgtgt atgatagaag tgcttacgga
     1201 tttaaatcag cacatataaa gctaaaagag ttttttaaca aagagccaca agaacaagaa
     1261 agaataatta actcaaacat acaagcacat aaagacatag aacaagagaa acaagagaaa
     1321 aatatagaac gagaaaaaaa atctcgtagt tttaaaatgt aagaaatatt tgctaaatat
     1381 ggctttcctt tcccttttta ctggtaaatt taaaagagct tatgagttta aaagaatctt
     1441 aaaaaagaga gttttaaaac ttaaaatttt cttaaaatct ttaatttttt tttggctttt
     1501 ccctttttat cttttttaat aaattctttt atcttatctt ttaggggggg ggctaagctc
     1561 ggtggcgtgg gcatttgcta aggtattaaa aacacaaatt aggagtatta aaaacacaaa
     1621 ttaggagtat taaaaacaca aattaggagt attaaaaaca caaattagga gtattaaaaa
     1681 cactattgac aaaaatgtgt gtttatatta taatcacaca tttaaaaaat aaggtgttta
     1741 aaatgaaaga aatagttaaa tatcacaacg attttaataa aataagctta cctagttttt
     1801 catctcaaga gcaaaatatc ctaatgggta ttttatgcaa aataaaagag cgaaaatcgg
     1861 acgaaaacat aatcttttat tcagatgaat tgctagaata tagcactgaa aatttaacta
     1921 aaaagtcttt aatgagcgta ataaacatac taagcgataa attctttaag gcagacttta
     1981 aaattttact aaaagacgaa gagaaaaaaa tatataaaaa tatcagattt aatcttttta
     2041 cagagttttg catcaagagc tatgatgaag aagttactga tataattagc atagaactag
     2101 gagtaaatcc tagatttgct tatttaattg gcgaattaac agctaatttt acaagttttg
     2161 agcttaaaga gtttatagga attagtggca aatattctaa aactctttat aggcttctaa
     2221 aacagtttag aaacagtggt aaatgcatta tatattctaa aaaatgggat gaatttagag
     2281 attttatgga tataccagaa agttatttgc cacaccatat agaccaaaga gttttaaacc
     2341 ctgcagttaa agaactatca gccgagcgtg atttatttaa caacaaaaag tctattttta
     2401 aaaacctaac atataaaaaa atcaaagatc ctaaaggcag aggtagaggc ggtaaagtaa
     2461 tcggcattga attttatttc acgccagagc caaacagaag cgaattacaa gaacagataa
     2521 aagatttaaa aagcttaaac acagagccaa aagaaacaaa aaatcaagag ccgaaaaaac
     2581 taaaaactag aacagattta tttggtaatc aagtaaacga tttagatagc tacataaata
     2641 gacactttaa agtaaaaaat aaatttgatg gtggttatga tagttgtaaa atcaaagagc
     2701 tatatcaaaa ttcaaatgga aaaattcaag gaatagcaat caatcaagaa aacaataaaa
     2761 cctttgattt aaattttgag agcttagagc atttgaaaaa ttcattaaga ataaaataga
     2821 tttttctttt tttgctaatg tgattttagc cccatgcagt ggcaaattac acccaaaaag
     2881 agtagtgagc ttgcgaatac tcttttaagg gtggtaattt gcaaattacc acccttttac
     2941 aagttcaagg gtggtaattt gttttttaca cttgaattat actcacaagt tcgctataat
     3001 gtcaagtgta aaaaatcaat ccattaaagg ggaaaaaatg gcaacagcaa tcacatacga
     3061 aaaatacgaa tatatgacaa agcgacaaat ttttacagca cttttaaacg ctgaaaaaaa
     3121 atttgaaaaa atgaaatctg atttagagag ccaaaaagat ttagtcaatt ttttaaaggc
     3181 aaaaagcaaa aagaaaattg atgaaaaaga aatttcaatt ccagcacttg atgaagcaat
     3241 cgcagaatat caaagtggaa aagtagaaaa atttaaaact tttgatgagt ttgaaagaag
     3301 tttagatgct tgaattatcg tatgcaacag cttttaaaaa agcttataag aagttaaatt
     3361 tagaagacca aacgcttaca aaggaagtaa ttaaaaaaat atctaatggc gaaaaattag
     3421 aaaaaaagca ttgcgaccac gacctaaaag gcaaatatgt aggctaccga gaatgccaca
     3481 taaagcctga tttgttattg atttataaaa tcaacaaaga tattttagag ctttatttgt
     3541 ccgccgttgg ctcacatagt gagctttttg gtaaatagca atgggctaca tttcaagcat
     3601 aaattttgaa aaatccattg ctataaatac agagcataac gacagaacac tagcaccgag
     3661 ctatttaatc gacacagaaa aaggggcgga gtgcaatcgc accgcagaga gtgcaagagc
     3721 cttaaaaaat caaatcatcg ccaaagcaaa agaaaattac actcaaaaca ccgggcaaaa
     3781 attccaagct aaaagttatg agtggtcggc agtttgcaac attaagcccg aaaccactat
     3841 gcaagattta gaaaaattag ccgaacactt t
//
LOCUS       DAPPKW010000129         3632 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.129, whole genome shotgun sequence.
ACCESSION   DAPPKW010000129 DAPPKW010000000
VERSION     DAPPKW010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3632)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3632)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3632
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.129"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            59..1036
                     /gene="hemB"
                     /locus_tag="RPW04_001882"
     CDS             59..1036
                     /gene="hemB"
                     /locus_tag="RPW04_001882"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDX6295958.1"
                     /translation="MFKRYRRLRINPAIRDMVRENKLNIEDFIYPLFVVEGSGVKKEI
                     SSMPGVFQLSIDEILKECEEVVNLGIKSILLFGIPNLKDSIGSDALDENGLIARSLRA
                     IKAKFPNLVIVTDLCFCEYTDHGHCGILDHVHETVDNDATLEISARQALIHARAGADM
                     IAPSGMMDGIIETLRNALDENGYENLPIMAYSTKFASAYYGPFRDVAQSSPSFGDRRS
                     YQMDCANRFEAINESLEDEAQGADILMVKPALAYLDIIRDIKERTLLPLCVYNVSGEY
                     AMLKASAKAGVIDYERVMIETMMSFKRAGADLIISYHAKEVAEFLKREK"
     gene            1045..1974
                     /gene="argF"
                     /locus_tag="RPW04_001883"
     CDS             1045..1974
                     /gene="argF"
                     /locus_tag="RPW04_001883"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDX6295959.1"
                     /translation="MRHFLTLNDLDKNEILDILSLAKDIKKEAKSRNYISYLKDQTLA
                     MIFEKSSTRTRVSFEVGIHQLGGKGLFLSSRDIQLGRGEPVKDTARVLGRMVDMIMAR
                     VYKQSDLEELAKFSGVPVINGLSDDFHPVQLMSDLLTLSELGLNLQTMKVAYVGDGNN
                     MTNSWLMAASKLGFELRVATPKGYEVPQWVLDIAKQNSKISCANLIITDNPKAAISGA
                     DVVTTDTWVSMGQEDEKEKRINDFAGYCVDDDMMSLAAKDAKFLHCLPAYRGYEVSEA
                     VFEAHAGEIFSEAENRLHAQKAVMVWCDRKRYE"
     gene            1967..2404
                     /locus_tag="RPW04_001884"
     CDS             1967..2404
                     /locus_tag="RPW04_001884"
                     /inference="COORDINATES: protein motif:HMM:NF022245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2603 domain-containing protein"
                     /protein_id="HDX6295960.1"
                     /translation="MNNERLDNISNSLGISKRKRTLFELEQISDNEMKLIIKNGKLNL
                     SVPWFGMSGNTPCTLVPAGLFEAIINTLKNAQKENFELKLEKSIWQHIPVDFGDVWSV
                     AIDEIKKSKFKKEPNLDRVVKKIKKEHPNLFVDMQSLIQSKEN"
     gene            2404..>3632
                     /gene="hemN"
                     /locus_tag="RPW04_001885"
     CDS             2404..>3632
                     /gene="hemN"
                     /locus_tag="RPW04_001885"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDX6295961.1"
                     /translation="MVDFEAFVQYSKPGPRYTSYPTALEFSDNFNYDEYIKRLKNGDK
                     NRKLSLYFHLPFCRSACYFCGCNVIYTSKSDKMSRYLDYLSKELEILSEVLDTKRQVT
                     QMHFGGGTPTFYSADELDRLIKEIKKHFKNWSDDAEISCEIDPRFLNEDQLDVLVGHG
                     FNRVSFGVQDFDEKVQTEIHRIQPFEMTKNAVDMARSKGITSINTDLIYGLPYQSLES
                     FKKTLELGVSLNPDRFAVFNYAHVPWIKKSMRKFDEATLPNPKIKLEILKYTMEFLTS
                     NGYKMIGMDHYAKEDDELFKALENGSLHRNFQGYTTKGGADLIGIGLTSIGEGDDYYA
                     QNYKDMVSYEKAIDDNKLPNSKGVLLNNEDKLRKAVIMDLMANFALDIKKIESKFNIK
                     FFEHFKNELNDLEELKD"
BASE COUNT         1278 a          508 c          779 g         1067 t
ORIGIN      
        1 tagatatatt tttaattaac ttaaatttag atataattgc tcaaaataag gagttaatat
       61 gtttaaaaga tatagaagac ttaggataaa tccggctatt cgtgatatgg taagagaaaa
      121 taaattaaat atagaagatt ttatatatcc actttttgta gttgagggaa gcggtgtaaa
      181 aaaagagata agctcgatgc caggcgtatt tcagctaagt attgatgaaa ttttaaaaga
      241 gtgtgaagaa gtcgtaaact taggtatcaa atccatactt ttgttcggca ttccaaattt
      301 aaaagatagt ataggtagtg acgcgcttga tgaaaatgga cttatagcaa gatctttaag
      361 agctataaaa gctaaatttc cgaatttagt tattgtgact gatctttgct tttgcgaata
      421 tacggatcac ggacattgtg gtatacttga tcatgttcat gaaacagtcg ataatgacgc
      481 tacgcttgag atctccgcta gacaagcttt aattcatgca agagcaggcg cagatatgat
      541 agctccaagc ggtatgatgg acggcatcat agaaacttta agaaacgcgc ttgatgaaaa
      601 tggatacgaa aatcttccga ttatggcgta ttcgactaaa tttgcttctg cgtattacgg
      661 accgtttcgc gacgtagccc agagttcgcc aagctttgga gatagaagaa gttaccaaat
      721 ggattgtgca aaccgctttg aagccataaa cgaaagtctt gaagatgaag cacaaggtgc
      781 agatattttg atggtaaaac cggctttggc ttatcttgat atcattagag atataaaaga
      841 aagaactctt cttcctcttt gcgtttataa tgtaagtggt gagtacgcta tgttaaaagc
      901 atccgcaaaa gctggagtaa tagactatga aagagttatg atagaaacta tgatgagctt
      961 taaaagagcc ggtgcggatt tgatcattag ctatcacgca aaagaggtag cagagttttt
     1021 aaaaagagaa aaataaggat ttatatgaga cattttttga cacttaacga cttagataaa
     1081 aatgaaatct tagatatttt aagtttagca aaagatataa aaaaagaggc aaaaagtaga
     1141 aattatatct catatctcaa agaccaaact ttagccatga tatttgaaaa aagctcgaca
     1201 aggacgagag ttagctttga agtaggcatt catcaattag gcggcaaagg attatttcta
     1261 agcagtcgcg atatacagtt agggcgcgga gaacctgtca aagatacggc tagagttctt
     1321 gggagaatgg tagatatgat aatggctaga gtttataagc aaagcgatct cgaagaactt
     1381 gctaaattta gcggagtgcc tgttataaac ggtcttagcg atgattttca tcctgttcag
     1441 cttatgtctg atctgcttac tttaagcgag cttggattaa atttacaaac tatgaaagta
     1501 gcgtatgtgg gagatggaaa taatatgacc aactcatggc tcatggctgc atctaagctt
     1561 ggatttgagc ttagagtagc aactccaaaa ggctatgaag tgccacagtg ggttttagac
     1621 atcgctaaac aaaactccaa aataagctgt gcgaatttga ttatcacaga taatcctaaa
     1681 gcagcaatta gcggcgcaga cgtcgtcacg accgatactt gggtctctat gggacaagag
     1741 gatgaaaaag aaaagcgcat taatgatttt gcaggatact gcgttgatga tgatatgatg
     1801 agcttagcgg ccaaagatgc taaattttta cactgtttgc ctgcttaccg cggatatgaa
     1861 gttagtgaag cggttttcga agctcacgcg ggggaaattt ttagcgaggc tgaaaaccgt
     1921 ttgcacgccc aaaaagctgt tatggtctgg tgtgatagga agagatatga ataatgagcg
     1981 tttagataac ataagcaact ctcttggtat ctcaaaaagg aaaagaacgc ttttcgagtt
     2041 agaacagata agcgataatg agatgaagtt gattattaaa aacggtaagt taaatttatc
     2101 tgttccttgg tttggtatga gtggaaatac tccttgtact cttgttccag caggactttt
     2161 cgaggccatc ataaatacgc ttaaaaatgc gcaaaaagaa aatttcgagc taaaactaga
     2221 aaaatctatt tggcagcata ttccagttga tttcggtgat gtttggagcg tggccataga
     2281 tgagataaaa aagtctaaat ttaaaaaaga gccaaattta gatagagttg taaaaaagat
     2341 taaaaaagag catccaaatt tatttgtaga tatgcaaagt ttgatacaaa gtaaggaaaa
     2401 ttgatggtag attttgaagc gtttgtgcag tattcaaagc ctggacctag atatactagc
     2461 tatccaacag cacttgagtt tagcgataat ttcaactatg atgaatatat taaacgttta
     2521 aaaaacggtg ataaaaatag aaaattatct ttgtattttc atcttccgtt ttgtcgctca
     2581 gcctgttatt tttgtggttg taacgtaatt tatacgagta aaagtgataa aatgagcaga
     2641 tatcttgatt atttaagtaa agagttagag atattaagcg aagttttaga tactaagcgt
     2701 caagtaactc agatgcattt tggcggcgga acgcctactt tttacagtgc agatgagctt
     2761 gatagactta taaaagagat aaaaaaacat tttaagaatt ggagtgatga tgctgagata
     2821 agctgtgaga ttgatccgag atttttaaat gaagatcaac tcgatgtttt agtgggtcat
     2881 ggatttaaca gagtgagttt cggcgtgcaa gattttgatg aaaaagttca aaccgaaatc
     2941 catagaatcc agccatttga aatgactaaa aatgctgtag atatggcaag atccaaaggt
     3001 attaccagta taaataccga tttgatttac ggtcttcctt atcagagttt agagagtttt
     3061 aaaaagactt tagagcttgg tgttagtcta aatcccgata ggtttgcggt atttaactat
     3121 gctcacgtac cttggattaa aaaaagtatg agaaaatttg atgaagctac tcttccaaat
     3181 ccaaaaataa aactagaaat tttaaaatat acgatggagt ttctaacttc aaacggatat
     3241 aaaatgatag gtatggatca ttacgcaaaa gaggatgatg agttgtttaa ggctttagaa
     3301 aacggcagtt tacataggaa ttttcaagga tatacaacta aaggcggagc agatcttatc
     3361 ggtataggtt tgactagcat aggcgagggc gatgattatt acgcgcaaaa ttataaagat
     3421 atggtttctt acgaaaaagc catagacgac aacaaacttc caaattcaaa aggagttttg
     3481 ttaaataacg aagataagct taggaaagcc gttataatgg atttgatggc aaattttgca
     3541 cttgatataa aaaagatcga atctaaattt aatattaaat tctttgagca tttcaaaaat
     3601 gagttgaacg atcttgaaga gttaaaagac tt
//
LOCUS       DAPPKW010000130         3599 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.130, whole genome shotgun sequence.
ACCESSION   DAPPKW010000130 DAPPKW010000000
VERSION     DAPPKW010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3599)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3599)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3599
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.130"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..400)
                     /locus_tag="RPW04_001886"
     CDS             complement(<1..400)
                     /locus_tag="RPW04_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDX6295962.1"
                     /translation="MKVLFIISTLRAGGAERVASLLASEFAIGNDVSLARFDNEKPFY
                     EMHDKVKLLSLDLGTGDCGFFGNFKKRFSKIFTIRKLIKNGEFDCVISFMDSTNLLVL
                     LATLFLKTKIIISEHSYHKFLSFKWRVLKRF"
     gene            complement(417..1931)
                     /locus_tag="RPW04_001887"
     CDS             complement(417..1931)
                     /locus_tag="RPW04_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide flippase family protein"
                     /protein_id="HDX6295963.1"
                     /translation="MALNLIASIVVFSLQMLINFFLTPFILKVLGDEAYGFLGLANSF
                     VNYGYILTLVINSVAGRFVAYEYHRGNLLQASKYYSSVLAVNFIFCIFICVVCSAFIL
                     NLKEFINVSEALVDDVKLTMAFYFINFCLGLFNAVLTISAFVKNKLYMISVRNAVSTA
                     IFAFVLVVLFYIFKPMIYYTAISALLASIFVFISAIYITKKLQTGLKFRLKYFRLNLI
                     KKLISSGTWNSFNMLSHTLINGIDLLLCNIFINAASMGILSVSKAAILIAESFIGTVG
                     ATFMPKFIELYSKQSINDLINEVKFCLKTLSFISISPVAVFAVLGSEFYTLWLPFKTD
                     YEISFIYNLSLIALMPVIFIAAMQPLLSLNTVTNKLKRPAVANLIMSFSVVAFQLILI
                     KDFGLYSIAICASAGYLARIILFDIPNAGVNLNQKMSLFYPVFLRNVFVFAVVLVSIL
                     LLKDFVEIKGWLSFVLAGTIFLLLGYVISFLIVFNKNEKLLLKRKILAIIYKFK"
     gene            complement(2086..3414)
                     /locus_tag="RPW04_001888"
     CDS             complement(2086..3414)
                     /locus_tag="RPW04_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HDX6295964.1"
                     /translation="MKIAVVGTGYVGLVSGACFAKMGNDVICIDVAEEKIQNLKQGII
                     PIYEPGLKEIVIEYYEKQNLRFSTDIKEALSFANVVFIAVGTPMGGDGQADLRYVLQV
                     AKSIGEHMQHPLVVVDKSTVPVGTAHKVSEVISKEQQNRGVEIKFEVVSNPEFLKEGA
                     AVEDFLKPDRVVVGASSEFGFNALRELYAPFMKNHNRLIEMDVKSAEMTKYAANSMLA
                     TKISFINEMATICEKVGADINMVRRGIGSDSRIGYSFIYPGCGYGGSCFPKDVEALIY
                     TAKQNGIDPLVLKAVEDRNKAQKRVIFDKINAYFNGNLKGKTIAIWGLAFKPNTDDMR
                     EATSITIINLLIKNGAKVQVFDPKAYAEAKIYFKDLDVIYAPNKYDALNGADCLALLT
                     EWSEFRSPDFIEMKNRLKTPTIFDGRNQYDRNILKELGFIYFEIGVSDEF"
BASE COUNT         1254 a          712 c          514 g         1119 t
ORIGIN      
        1 taaagcgctt taaaactctc catttaaaac ttaaaaattt atgataacta tgctcagaga
       61 tgattatttt ggtcttcaga aaaagagttg caagcaaaac aagtaaattc gtactatcca
      121 taaaagatat cacgcagtca aactcaccat tttttataag ctttctaatc gtaaaaatct
      181 tgctaaaacg ctttttaaaa ttcccaaaaa atccacaatc cccagtacct aaatcaagac
      241 ttaaaagttt tactttatca tgcatctcat aaaaaggttt ttcattatca aacctagcta
      301 agctaacatc attaccaatg gcaaactcgc tagcaagcag actagccact ctttcggcgc
      361 cgcctgctct aagagttgag atgataaata aaactttcat taaaatcctt gattgcttat
      421 ttaaatttat aaattatagc caaaatttta cgctttaaaa gcagtttctc atttttatta
      481 aaaacgatta agaaactaat tacataacca agaagtaaaa aaatagttcc cgctaaaaca
      541 aaacttaacc aaccttttat ctctacaaaa tcttttagca ataatataga taccaaaaca
      601 acggcaaaaa caaaaacatt tcttaaaaat accggataaa atagactcat tttttgattt
      661 aaatttactc cggcatttgg tatatcaaac aaaattattc tagccaaata tccagcgctt
      721 gcgcaaatcg cgatagagta aagcccgaaa tcttttatta aaatcagctg aaaagcaaca
      781 acgctaaaag acatgatgag atttgcaacg gccgggcgtt taagcttgtt tgtgaccgtg
      841 tttaaactaa gaagaggctg catagccgct ataaaaatca cgggcattag agcgatgaga
      901 gaaagattat aaataaaact tatctcataa tcagttttaa aaggcaacca aagagtgtaa
      961 aactcacttc caagcactgc aaatacagcc actggagaga tacttataaa agacaacgtt
     1021 tttaagcaaa acttcacttc gtttatgaga tcatttatac tttgttttga gtatagctct
     1081 ataaatttag gcataaaagt cgcgcccacg gtacctataa atgactccgc tatcaaaatg
     1141 gcggcttttg aaaccgagag aattcccata gaagctgcgt ttataaagat attgcaaagt
     1201 agcaagtcaa taccgttgat caaagtatga cttagcatat taaaactatt ccaagttccg
     1261 gagcttatga gttttttgat aagatttagc ctaaaatact ttagcctaaa cttaagcccg
     1321 gtttgcagtt ttttcgttat ataaatcgcg ctaataaata cgaaaatcga cgctaacagc
     1381 gcagaaatcg cggtgtaata gatcatcggt ttaaaaatat aaaaaagtac caccaaaaca
     1441 aacgcaaaaa tcgcagttga aacggcattt ctaacagata tcatataaag cttgtttttc
     1501 acaaaagcac ttatagttaa aaccgcgtta aaaagcccca aacaaaaatt tataaaataa
     1561 aacgccatag taagcttaac atcgtccact aaggcttctg aaacgtttat aaactctttt
     1621 aaatttagta taaaagcaga gcaaaccacg catataaaaa tgcaaaatat aaaatttacc
     1681 gcgagcacgg acgaataata tttacttgct tgtaagagat ttcctctgtg gtattcatac
     1741 gccacaaagc gtcccgcgac tgagtttata accaaagtta agatataacc gtaatttacg
     1801 aatgagtttg caagacctaa aaatccgtac gcttcatctc ctaaaacctt taagataaaa
     1861 ggagttaaaa agaaatttat aagcatctga aggctgaaaa ctacgatact tgctataaga
     1921 tttaaagcca ttgcaaacag atcactttat tttaccgacg aataaattcg tctttaaggc
     1981 aaaagacttc gcactttcaa aatccataga attatgtatt ttatattgca aatgaaactt
     2041 atgtttatga gtaaataaac tcatctttta gacgcttttt taaattcaaa actcatcgga
     2101 aacacctatc tcaaaatata taaatcccaa ctcttttaaa atatttctat catactgatt
     2161 tcgcccatca aatatagtag gagttttaag gcgatttttc atctctataa aatcaggaga
     2221 tctaaactca ctccactcag tcagtaaagc caaacaatca gctccgttta gcgcgtcgta
     2281 tttgtttgga gcataaatca catccaaatc tttaaaataa attttagctt cagcgtaagc
     2341 ttttggatca aaaacttgta ctttagctcc gttttttata agcaaattta taatagttat
     2401 agaagtcgct tctctcatat catcggtatt tggtttaaac gcaagccccc aaatcgctat
     2461 agttttacct tttaaattac cgttaaaata tgcatttatc ttatcaaaaa tcactctttt
     2521 ttgagctttg tttctatctt ccacagcttt taaaactagc ggatctatac cgttttgttt
     2581 agcggtgtag ataagtgctt caacgtcttt tggaaaacag cttccgccat aaccgcatcc
     2641 aggatagata aaactatacc ctatgcgaga gtcgcttccg attccgcgcc taaccatatt
     2701 tatatcggct ccgacttttt cgcagattgt agccatctcg tttataaaac ttattttggt
     2761 agcaagcata gagtttgcgg cgtatttcgt catctcagca ctttttacgt ccatctctat
     2821 aagacgatta tgatttttca taaacggcgc gtaaagctct cttaaggcgt taaatccaaa
     2881 ctcgctacta gctcctacca caacacgatc aggctttaaa aaatcctcaa cggcagctcc
     2941 ttcttttaga aactcaggat tgctaactac ttcaaatttg atctccacgc ctctattttg
     3001 ctgctctttt gatataactt cgcttacttt atgtgctgtt cctactggaa cagtgctttt
     3061 atcgaccacg acaaggggat gctgcatatg ttcgcctatg ctttttgcaa cttgtaaaac
     3121 atatcttaaa tccgcttgtc catctccgcc cataggcgta ccgactgcta taaaaacaac
     3181 attagcaaag cttaaagctt ctttgatatc cgtgctaaat cttaaatttt gcttctcata
     3241 atactcgatt actatctctt taagacctgg ttcgtaaata ggaataatac cttgttttag
     3301 attttgtatt ttttcttctg cgacgtctat acaaataaca tcattaccca tcttcgcaaa
     3361 acaagctcca ctgactaacc caacatatcc tgtgcctact actgctattt tcatgcaaaa
     3421 tttcctaaaa atttatttga taattatagc aaaatatttt catataaggt ataataaaca
     3481 aaaagcttta aggttgattt taatgaaaca tattaaaaca agcaataaga aagagtgcga
     3541 aataccttgc cgttttttag ataaaggcag tgtgtctatt gtggttcctt gttacaatg
//
LOCUS       DAPPKW010000131         3572 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.131, whole genome shotgun sequence.
ACCESSION   DAPPKW010000131 DAPPKW010000000
VERSION     DAPPKW010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3572
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.131"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(225..371)
                     /locus_tag="RPW04_001889"
     CDS             complement(225..371)
                     /locus_tag="RPW04_001889"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295965.1"
                     /translation="MARDLYLYLREIETINGSKKRRRDKTDANEYIKLSKIDDTIRYQ
                     LIFF"
     gene            complement(486..719)
                     /locus_tag="RPW04_001890"
     CDS             complement(486..719)
                     /locus_tag="RPW04_001890"
                     /inference="COORDINATES: protein motif:HMM:NF018755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1353 domain-containing protein"
                     /protein_id="HDX6295966.1"
                     /translation="MKQSFLVCCSQQVSGINIPKGYKNGADIPHIFLVIASTFKPKYL
                     DAIVLHGYLCDNAKSKAEYRTADILLKSSMENL"
     gene            complement(844..2412)
                     /locus_tag="RPW04_001891"
     CDS             complement(844..2412)
                     /locus_tag="RPW04_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase family protein"
                     /protein_id="HDX6295967.1"
                     /translation="MNRRTFLKLNALGLVSFCNAYANHINHFGMHHEMMNVNDSILNI
                     DTSFINFSSNNLKLLDEKYFPQNQNLKALPLLKNESKTKNTFKATLQITQSQLEIVKG
                     KKTKVYTYNGTIPAPKIEVFEGDNVEILVKNRLSEPTTIHWHGLLVAPEQDGNPHDHI
                     LAGEERVYRFNLPMGSAGTYWYHPHPHHIASKQVFMGLAGAFVVKSKQDALSDLVEKD
                     LMISDLRLDENAQIPNNNLTDWLNGREGEFILINGQYKPKIRLATNERIRIYNATSAR
                     YLRLKIHGANFILVGTDGGLIQKPIYKDEIFLTPASRVEVLIQSSKSGEFKLESLYYN
                     RDKMMVQEEPKTLFLADIILENKDISIPDKLRELPRLEEPKSFKKIIMSENHSKMMQI
                     MNSKDDNEIKAALASMFLMNSKTYDLNRTDLISEVGVVEEWVVNNNSHMDHPFHIHGT
                     QFEVISSKLNNVVSKPEFRALRDTINVRPNEEIRLRMKQDFVGTRMFHCHILEHEDLG
                     MMGNLEVKEYHLKH"
     gene            2634..>3572
                     /locus_tag="RPW04_001892"
     CDS             2634..>3572
                     /locus_tag="RPW04_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HDX6295968.1"
                     /translation="MQQRGLATKVSIGVSILFMILLIVLTYINYSNSKVNTTQLLSSE
                     RAKSIQAGKMLLDTQFKKAIVGIENLSKLFSSNNYDYKEVENILKNINSSMDFEAMYI
                     AYQDNGMIVASDGNSGLPTDEYDPRKQNWYQEAANLRKTLITEPYIDNVTKKQIITAA
                     TPFYKDNKLLYVVGADFTIDGIQKEFNELGNAEGAYMLLMDKNAKLIMHPNSDFIGKT
                     LNATKEILKNYKANNVDEYGRLPYTHEDGSKKLGRCVSFGINDWIICSNVDIDFFSKK
                     TDNILYKNIIISITFIILATLIIYILVKRFLKPIQII"
BASE COUNT         1238 a          574 c          494 g         1266 t
ORIGIN      
        1 aaattataga cttgaactaa cttttgctat agcttttata ttttcagaca aaacagcttc
       61 tatatcatct gtaatattaa aaagatttca aagagattat tgaatacaat gaaataaatg
      121 atcaagataa tatattgaaa caatataatt tattaacaaa ctacagaagt aaaaacaata
      181 cagttagttt tgcaaataaa tttagtgaat atctaccaaa tcgattaaaa aaagataagc
      241 tgatatctta tggtatcgtc tatctttgat aatttgatat attcatttgc atccgtttta
      301 tctctccttc tttttttgct tccgttgatc gtctctatct cgcgcagata tagatacaaa
      361 tcccgcgcca taatagcccg attctctttg gctagttgcc ctcctgtcaa aatccgtatc
      421 aagtagatca aaaatctccg cattaaaatc aatttgtaga aataaaaaac tgttaattta
      481 tttgctcata gattttccat agatgatttg agcagtatat ccgctgttct atactctgcc
      541 ttgcttttcg cattatcaca taagtagccg tgcaagacta tcgcatcgag atattttggc
      601 ttaaaggtgg atgcaataac caaaaatata tgcggtatat cagcaccgtt tttatatcct
      661 tttggtatat taataccact aacttgctga gaacagcata ctaaaaagct ttgcttcatt
      721 ttaatgataa aaaataaagc actaaaatat tatgacacat atacgtcata atatttacat
      781 taaaaatcag acgatattga gttacaaagt atatcaaatt tgataacaat tcatttcatt
      841 aaattaatgc ttaagatgat attctttcac ttctaaattt cccatcattc ctaaatcctc
      901 gtgctctagt atatggcaat gaaacattct agttccaaca aaatcctgtt tcattctaag
      961 tcttatctct tcatttggtc tgacattgat tgtatctctt aatgctctaa actccggttt
     1021 tgatacaacg ttatttagtt ttgagctaat aacttcaaat tgagttccat gtatgtgaaa
     1081 tggatggtcc atatgcgagt tgttatttac tacccactct tccactactc caacttcaga
     1141 aattaaatca gtcctattta aatcataagt ctttgaattc atcaaaaaca ttgatgcaag
     1201 ggctgcttta atctcattgt catctttaga attcattatt tgcatcattt ttgagtgatt
     1261 ttcactcata attatttttt taaagctttt aggctcttct aatcttggta attctcttaa
     1321 tttatctgga atactaatat ctttattctc taggatgata tcagctaaaa ataatgtttt
     1381 tggctcttct tgtaccatca ttttatctct attataatat aagctttcaa gcttaaactc
     1441 accgctttta ctactttgta ttaatacttc aactcttgaa gcaggagtta aaaatatctc
     1501 atctttataa atcggttttt gaatcagccc accgtcggtt cctactagta taaaatttgc
     1561 tccgtgtatt tttaatctca aatatcttgc agaagtagca ttatatattc ttatacgttc
     1621 atttgtggct aagcgtattt taggtttata ctgcccattt attaaaataa attctccctc
     1681 tcttccattt agccaatcgg ttaaattgtt atttggaatt tgagcattct catcaagtct
     1741 taaatcgctt atcatcaaat ctttttctac taaatcgctt aaggcatctt gcttagactt
     1801 aacgacaaaa gctccagcta aacccataaa aacctgtttt gaagcaatat ggtgaggatg
     1861 tggatgatac cagtatgttc cagcgctacc cataggcaag ttaaagcgat atactctttc
     1921 ttcgccagct aaaatatgat catgcggatt accgtcttgc tctggagcta ccagtagtcc
     1981 gtgccaatga atggttgtag gctcacttaa tctattttta actaaaattt ctacgttatc
     2041 gccttcaaaa acctcaattt ttggtgctgg tattgtaccg ttatatgtat atactttagt
     2101 ctttttacct ttaactatct ctagttggct ttgagtaatt tgtaaagttg ctttaaacgt
     2161 attttttgtt ttgctttcat ttttaagcaa aggcaaggct tttagatttt gattttgcgg
     2221 aaaatatttt tcatcaagaa gctttaaatt gtttgaagaa aagttaataa aagatgtatc
     2281 aatatttaat atactatcat tgacgttcat catttcatgg tgcataccaa aatgattaat
     2341 gtgatttgca tatgcattac aaaaactaac taatcctaag gcatttagct ttaaaaatgt
     2401 tcttctattc attataactc ctattattaa gttttgcatc gtttggtatt ttaactaaca
     2461 aatttttata aaactaaaac aaaaaataat ctttatcgac ttccaaagct tttgatttta
     2521 taggagatta tattactctg aaatttgatt taaatgatac tatatatcat ttaataataa
     2581 attaaaaatc aatctagtat aatttcaaaa tagaaatatt ttaaggagca tatatgcaac
     2641 aaagagggct tgccacaaaa gtatcgattg gagtatccat attatttatg attctgctta
     2701 tagttttaac atatataaac tattcaaatt caaaagtaaa tacgactcaa ctcttatcaa
     2761 gtgaaagagc aaaatccata caagctggta agatgttatt agatacacag tttaaaaaag
     2821 ccattgtagg tattgaaaat ttatcaaagc tatttagctc aaataactat gattataaag
     2881 aagttgaaaa tatactcaaa aatatcaata gctcaatgga ttttgaagca atgtatatag
     2941 catatcaaga taacggaatg attgtagctt cggatggaaa ttctgggctc ccgactgatg
     3001 agtacgatcc tagaaaacaa aactggtatc aagaagcagc aaatttaaga aaaacgttaa
     3061 ttacagaacc gtatatcgat aacgtaacaa aaaaacagat aataacggca gcgactcctt
     3121 tttataagga taataaacta ctatacgtag taggtgcgga ttttacgatt gatgggatac
     3181 aaaaagagtt taatgaacta ggaaacgccg aaggagcata tatgcttttg atggataaaa
     3241 atgcaaaact aataatgcat ccaaatagcg attttatagg aaaaacatta aatgctacaa
     3301 aagaaattct caaaaattac aaagctaaca atgtagatga atacggtagg cttccataca
     3361 cacatgaaga cggatctaaa aaacttggca gatgtgtttc gtttggaata aacgattgga
     3421 ttatttgtag caatgtagat atagattttt ttagcaaaaa gactgataat atactttaca
     3481 aaaatattat catatctata acatttatta tattggcaac actaataata tatattttag
     3541 taaaaagatt tttaaaacct atacagatta tc
//
LOCUS       DAPPKW010000132         3549 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.132, whole genome shotgun sequence.
ACCESSION   DAPPKW010000132 DAPPKW010000000
VERSION     DAPPKW010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3549
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.132"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..942
                     /locus_tag="RPW04_001893"
     CDS             <1..942
                     /locus_tag="RPW04_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HDX6295969.1"
                     /translation="KWSLWAYGGLLVIVISLVLQTRLNVAINDWYKNFYDILQNVKEH
                     SIDEFWAGIWKFLFIAMPYVIIATLTNFFASHWVFRWREAMTFSYVDIWRKCEQDIEG
                     SSQRMQEDVYRFAKITETLGLQVLRAIMILIAFIPVLWGLSKGVDVPIIKDIPGSLVW
                     VALIVSVGGLVISWFVGIKLPKLEYNIQRSEAAFRKELVYAEDDKINYAKNESVVELF
                     TGLRINFYRLFLHYGYFNIWLISFSQFMVIVPFMIMGAGLFTGLITLGILVQVSNAFD
                     QVRSSFSVFIDNWTTITELRSIHKRLDEFEKNIKFKG"
     gene            950..1756
                     /locus_tag="RPW04_001894"
     CDS             950..1756
                     /locus_tag="RPW04_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDX6295970.1"
                     /translation="MKSNFVAILAFSLVILGGCFYSSTKPTVSQASHSQLFLVSKEQM
                     DVGAKDAYNEVLIAAKNKNKLNANTKETKRVRDISSRLISQVGAFRSDARSWDWQVNV
                     INESTVNAWCMPGGKIVVYSGIMEKLNLNDNELAAIIGHEISHALREHSRENASIDLA
                     KNAAITIGGKLLGLDEASMNLANLATKYTITLPFSRSNETEADAMGAELMARAGFDPS
                     SAITLWEKMSKLSSSSALQITSTHPSHSTRINDLKNIIKKVEPLYLNSQK"
     gene            complement(1847..3442)
                     /locus_tag="RPW04_001895"
     CDS             complement(1847..3442)
                     /locus_tag="RPW04_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002825552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate permease LctP family transporter"
                     /protein_id="HDX6295971.1"
                     /translation="MTNEVNWLHAAISGLPIILFFTALVWLKLKGWVAAAATVTLSFI
                     IAITLNDMSVIKALASFAGGFLKGLWPIAWIIIAAIFLYKLSDKSGYFNVLKHSVMSI
                     TPDHRIQVILIAFCFGSFLEGAIGFGGPVAITAALLVGLGLRPLYAAGLCLIANTAPV
                     AFGAVGIPIIAMAQAVNVDQNVISAMVGRMLPPVSLFVPFFIVFLMDGFKGVRETFPA
                     IFVATISFAATQFYSSNHIGPELPDIISAIVSIIVTSAFLKIWKPKNIFRVDRSEYKD
                     DGQLIPLKDIWLAWAPFIILVVAVIIWQIPSFKALFKTGGMFEFTGMTFVIYEDIKFR
                     LDLILTAGTAILLAGIVSIFILSVNAKTVALAAKDTLKEMKIPVLTIGLVVAYAVLAE
                     KSGQASLMGTALAQTGDAFAFFSPIIGWLGVFLTGSDTSSNLLFGSLQVAAANALMSA
                     PDATIKQGLDVLFLAANTFGGVVGKMISPQSIAIACAAVGLVGKESDLFRFTVKYSIG
                     FIIACGAITYIIAHWLPFIIPTA"
BASE COUNT         1172 a          621 c          662 g         1094 t
ORIGIN      
        1 aagtggtctc tttgggctta tggcggactt cttgtgatag tcatttcgct agttcttcaa
       61 acaagattaa atgtagcaat taatgattgg tacaaaaatt tttacgatat tttacaaaat
      121 gtcaaagaac attccataga tgagttttgg gccggaattt ggaaattttt atttattgct
      181 atgccttatg ttattatcgc tactcttact aatttttttg ctagtcattg ggtatttcgt
      241 tggcgtgaag ctatgacttt ttcatatgtg gatatctgga gaaagtgtga acaagatata
      301 gaaggatcta gccagcgtat gcaagaagat gtttatagat ttgctaagat aacagagact
      361 ttaggacttc aagttcttag agctattatg attcttatag cttttatacc tgttttgtgg
      421 ggacttagca aaggtgttga cgtgcctatt ataaaagata tcccaggatc tttggtatgg
      481 gtagcgctta tagttagcgt cggaggactc gtaatatcat ggtttgtcgg tatcaagcta
      541 ccaaaactag agtataacat acaaagaagc gaagctgcat ttagaaaaga gcttgtatat
      601 gccgaagatg ataagataaa ttatgccaaa aatgagagcg ttgtagagct atttaccgga
      661 cttaggataa atttttacag actgtttttg cattatggct actttaatat ctggttaatc
      721 tcattttctc aatttatggt tatagtacct tttatgataa tgggagcagg gctttttacg
      781 ggtctcatca ctcttggtat tttagtgcaa gttagcaacg catttgatca agtaagaagc
      841 agctttagtg tatttataga taattggact actataactg agcttagaag tattcataaa
      901 cgtttggatg aatttgagaa gaatatcaaa tttaaaggat aaatttataa tgaagagtaa
      961 ttttgttgct attttggctt ttagcttagt gattttaggc ggatgttttt acagctcaac
     1021 aaagccgacg gtttctcaag ctagccattc tcagctattt ttagtaagca aagagcagat
     1081 ggatgtcggt gctaaagatg cttataatga agttttaata gcagctaaaa acaaaaacaa
     1141 gctaaatgcc aacaccaaag aaaccaaacg agtaagagat atatcaagca gacttatatc
     1201 gcaagtcggt gcttttagaa gtgatgctag gagttgggat tggcaagtaa atgtgataaa
     1261 tgaaagcacg gtaaatgcgt ggtgtatgcc aggaggtaaa atagtagttt atagcggaat
     1321 aatggaaaaa ttaaatttaa atgacaatga actagctgct ataataggtc acgagatctc
     1381 tcacgcctta agagaacata gcagagaaaa tgctagtata gatttagcta aaaatgcagc
     1441 tatcacgatc ggaggtaagc ttttagggct tgatgaggct agtatgaatt tagcaaattt
     1501 agctacaaaa tatacgataa ctcttccatt ttctagatca aatgagactg aagcagatgc
     1561 tatgggagcc gaattgatgg caagagctgg atttgatcca agctctgcga taactctttg
     1621 ggaaaagatg tcaaaactaa gttcatcatc tgctttacag ataacttcca ctcacccatc
     1681 tcattctact agaataaacg acttaaaaaa tatcattaaa aaagtagaac ctttatatct
     1741 aaattcacaa aagtagtttt tatatcggtt ttattttaaa tttaaaattt aggtaaatta
     1801 acctatctaa atttgcagct tttatactgc aaatttatag ctaagatcaa gcagtcggga
     1861 ttataaatgg tagccagtga gctattatat aagttatagc gccacaagct attatgaatc
     1921 ctatcgagta ttttactgta aatctaaata gatcgctttc ttttcctacc aaaccaacag
     1981 ctgcacacgc tatagcgata ctctgcggac ttatcatttt acctactacg cccccaaacg
     2041 tatttgctgc taaaaacagt acatcaagac cttgcttgat tgtcgcatca ggtgcactca
     2101 taagtgcgtt tgcagctgct acttgaagtg atccaaatag taaatttgag ctagtatccg
     2161 agcctgttag aaatactcct aaccaaccta taataggtga gaaaaatgca aacgcgtcgc
     2221 ccgtttgagc aagagccgtt cccataagac ttgcttgacc gcttttttcg gctaaaactg
     2281 cgtaagcgac caccagacct atcgtaagta ccggaatttt catctctttt aaagtatctt
     2341 tggctgctaa agcgactgtt tttgcattta cgcttagtat aaatatgctc actatgccgg
     2401 ctaaaagtat agccgtacct gctgtaagta ttaagtctag tctaaatttt atatcttcat
     2461 atatgacaaa tgtcataccg gtaaactcaa acatccctcc ggttttaaat agtgctttga
     2521 aactaggaat ctgccagatt attacggcta ctactagtat aataaaaggc gcccatgcta
     2581 accaaatatc ttttaaaggt attaattgcc catcatcttt atattcgctt ctgtcaactc
     2641 tgaatatatt ttttggtttc caaattttta aaaatgcaga tgtaactatg atggatacta
     2701 tcgccgaaat aatatctgga agttccggtc ctatatggtt tgaactataa aactgtgtcg
     2761 ccgcaaaact gatagtagct acaaatatag caggaaacgt ctccctaact cctttaaatc
     2821 catccattaa aaatacgatg aaaaacggaa caaaaagact aacaggcgga agcattcttc
     2881 ctaccattgc ggagataacg ttttgatcga catttacagc ttgagccata gctataatag
     2941 gaattccaac agcgccaaat gcaactggag cggtatttgc tatcaaacaa agaccagcag
     3001 cgtataaagg gcgaaggcca agtccaacta acaaagccgc agttatagca acaggtccgc
     3061 caaatccgat agcgccttct aaaaacgagc caaaacaaaa cgcgatcaat ataacttgaa
     3121 ttctgtgatc cggagttata ctcattacac tatgttttaa tacgttaaag tatccgctct
     3181 tatcagaaag tttgtacaaa aatattgcgg cgattataat ccacgcaata ggccataagc
     3241 cttttaaaaa tccgcctgca aacgacgcta aagccttgat cacggacata tcattgagtg
     3301 tgatagctat gataaaactt agagtaaccg tagctgctgc ggccacccaa ccttttagct
     3361 tcagccatac taaggctgta aaaaatagaa taataggcag cccgctaata gcggcatgta
     3421 gccaatttac ttcattagtc attaagtctc cttataattt ttttataaag ctatggtgtt
     3481 actatatcaa aaaaattaag ttttataaag aatacttatt caatttatca aaaaaatagt
     3541 taatatgtt
//
LOCUS       DAPPKW010000133         3540 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.133, whole genome shotgun sequence.
ACCESSION   DAPPKW010000133 DAPPKW010000000
VERSION     DAPPKW010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3540)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3540)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3540
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.133"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..1935
                     /locus_tag="RPW04_001896"
     CDS             <1..1935
                     /locus_tag="RPW04_001896"
                     /inference="COORDINATES: protein motif:HMM:NF014075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility associated factor glycosyltransferase
                     family protein"
                     /protein_id="HDX6295972.1"
                     /translation="EELGLQIAQRKEITIFDRNIAAIMTYSWRLAKMLFDLKENKKFG
                     VFMGKDPLDINIINLETKKYLYESPAKEVEEKIISFEEEYSRHKALYFYGIGNGIFIK
                     SLLSNESHSRIIVFEPELEILYIALSLIDFSVDIYNERLVILYPDLVRFIELYTISLF
                     PDVMISSRLYNMHVVNDFYNQKEYQAGMVDINQKILKAIKQVFLEAGNDSKDTLIGIK
                     HSTKNLPIVFDSYPIERVFKKRKNAVKNAVIVATGPSLFKQLKTLKKIAPYVTIISID
                     ASYPILKKHGIKPDYVSSIERVELTSKFFKDPVSEFDDGILFVTASLTHEKTIENLKD
                     RQTSYVLRPLHYERGFNDNEFGYIGGGPSAAHMAFDIALKLEHENIILVGQDLAFGDD
                     GTSHSKGHIFKKTEIDPSQTNVELAPKYGGIGEIATTTIWNLFRNYFEHYIQSTSQAA
                     KFTVYNCTEGGARIQGTIEKPFKEIADLILDKPIKKRFIPIAKINQASKERHLNKARK
                     HILKIIKYGENLQKKCEKLFLKIAKEVEKAKKLKAKNQADKINYTKMQNLSFALDDLK
                     TNLNDEIFLSTFYGCCGQVLLHQELELAVIAARKIDTEEEKKDKLFEWISSQSYWLFS
                     LAGNINLELEEIKKSAKEWL"
     gene            1949..3514
                     /locus_tag="RPW04_001897"
     CDS             1949..3514
                     /locus_tag="RPW04_001897"
                     /inference="COORDINATES: protein
                     motif:HMM:NF021624.1,HMM:NF024880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HDX6295973.1"
                     /translation="MINDLIKASYDEVLYRSNSYNMTCIDRLYEVAKMHGLSPRNPDN
                     ARVLEIGCASGGNIMGQAINHPNSHFIGIDLSDEQVKIGKEAICSIGIKNIELITMDI
                     CDLISIYKDKLSFDYIIVHGVYSWVPNEVRAAILESSRELLDDDGVALISYNTYPGWK
                     INEITRDFMRFSAVNSDKQDKLQAALNALKFEKAAYASTKISPEQTYQILTRELKLDT
                     INQIEETKDKAYLYHEYLEIFNQPFYLSDFVADLEDFSLCYIADMQFHFSYDEFVNQS
                     VKEYAKLAYPDRISKDQMFDFLNSTKFRSSLITKKQNEQKLVFDDDSILKNISDFHLV
                     FSKHLDELKQQVKDLDIEPLVNSLYDAFPASISIKDACKLINKDELVSKIYYLMDTTN
                     AVILPHKELVDIQYKPKFSKLKPVYKPYLEYFLNKPNSVISCSTPMNLLFIGNHIEIM
                     TLLMLDGQNSLEDISKFLEEEFKKQKLIPNAIINGKQIPIKDAKSKKEFFKNAVATVA
                     YSARINYLLERMN"
BASE COUNT         1336 a          497 c          604 g         1103 t
ORIGIN      
        1 gaagaattgg gtctgcaaat agcccaaaga aaagagataa ctattttcga tagaaatata
       61 gcagctataa tgacttatag ttggcgatta gctaagatgt tgtttgattt aaaagagaat
      121 aaaaaattcg gcgtatttat gggaaaagat cctcttgata taaatatcat aaatttggaa
      181 accaaaaaat atctttatga aagtccagca aaagaggttg aagagaaaat tattagtttt
      241 gaagaggagt atagtagaca taaggcgctg tatttttatg gcataggaaa cggtatattt
      301 ataaaatctc ttttgtctaa tgaatctcac agtagaataa tagtatttga gcctgagctt
      361 gagatacttt atatagcgct tagtttgatc gacttttcgg ttgatatata taatgaaaga
      421 cttgttatac tttatccaga tcttgtacga tttatcgagc tttatactat aagtttattt
      481 ccagatgtaa tgattagctc aagactatat aatatgcatg tagtaaatga tttttataac
      541 caaaaagagt accaagcagg tatggtagat ataaatcaaa aaatattaaa agcaataaaa
      601 caggtatttt tagaagccgg aaacgactca aaagatactc taataggtat aaaacatagc
      661 acgaaaaacc ttccgattgt ttttgatagt tatcctatag aacgtgtctt taaaaaacga
      721 aaaaatgctg taaaaaatgc tgttatagta gctaccggtc cgtctctttt taaacagctc
      781 aaaactctta aaaaaatcgc tccatacgta actatcatat ctatagatgc ttcttatcct
      841 atacttaaaa agcatggcat aaagccggat tacgtttctt ctatagaacg cgtagagctt
      901 acatctaaat tttttaaaga tccagtaagt gaatttgatg atggaatttt atttgttact
      961 gcatctttaa cgcatgaaaa aacaattgaa aatttaaaag ataggcagac atcttatgtt
     1021 cttagaccgc tgcattatga gcgtggcttt aacgataatg aatttggata tataggcgga
     1081 ggtccaagtg ctgctcatat ggcttttgat attgctttaa aattagagca tgaaaatata
     1141 attcttgtag gtcaagattt agcttttgga gatgatggaa ctagccattc aaaaggtcat
     1201 atttttaaaa aaacagaaat tgatccaagt caaacaaacg tagaactagc tccaaaatac
     1261 ggtggaatcg gagagatcgc tactactact atttggaatt tatttagaaa ttattttgaa
     1321 cactatatcc aaagtacttc acaagctgct aaattcactg tttataactg cactgagggt
     1381 ggtgctagaa tacaaggtac tatagaaaaa ccttttaaag agatcgcaga tttgatacta
     1441 gataaaccga ttaaaaaacg atttatccct attgctaaaa taaatcaagc ctctaaagaa
     1501 cgtcatttga ataaagcaag aaagcacatt ttaaagatta ttaaatatgg tgaaaattta
     1561 caaaagaaat gtgaaaaact atttttaaag atagctaaag aagtagaaaa agcaaaaaaa
     1621 ttaaaagcaa aaaatcaagc agataagata aactatacaa aaatgcaaaa tctctctttt
     1681 gctttagatg atttgaaaac aaatctcaat gatgagatat ttttatcgac attttatgga
     1741 tgctgcggtc aggtactttt acatcaagag ttagaattgg cagttatagc tgctagaaaa
     1801 atcgacaccg aagaagaaaa aaaagataag ctttttgaat ggatttcatc tcaaagctac
     1861 tggttattta gtttagcagg aaatatcaac ttagagttag aagagattaa aaaatcagcc
     1921 aaagagtggc tataaccaaa ggaatttaat gataaacgat cttataaaag catcttatga
     1981 tgaggtttta taccgttcaa attcatacaa tatgacttgc atagataggc tttatgaagt
     2041 agccaaaatg catggactct cacctagaaa tccagacaat gctagagttt tggagatcgg
     2101 ctgcgcatct ggaggaaata tcatgggtca agctataaat catcctaatt cgcactttat
     2161 aggtatcgat ctaagcgatg agcaagtaaa gataggcaaa gaggctattt gctcaatagg
     2221 cataaaaaat atcgagctta tcactatgga tatctgtgat cttataagta tttataaaga
     2281 caaattgagt tttgattata ttatagttca tggggtttat agttgggtgc caaatgaggt
     2341 aagagctgct attttagaga gttcgcgcga acttttagat gatgatggcg ttgcgcttat
     2401 tagttataat acatatcctg gttggaagat aaatgagata acaagagatt ttatgcgttt
     2461 ttcagctgta aattcagata aacaagataa acttcaagct gctttaaacg ctcttaaatt
     2521 tgaaaaagca gcatatgcta gtactaaaat atctcccgaa caaacttatc agattctaac
     2581 aagagagttg aaattagaca ctataaacca aatagaagaa actaaagaca aagcctattt
     2641 ataccacgaa tatcttgaga ttttcaatca gccgttttat cttagtgatt ttgtggctga
     2701 tttagaggat ttttcgctct gttatatagc agatatgcag tttcacttct catatgatga
     2761 atttgtaaac caaagcgtaa aggagtatgc taaattggca tatcccgatc gtatatcaaa
     2821 agatcagatg tttgattttc taaattcaac caaatttcgc tcatctctta tcacaaagaa
     2881 gcaaaatgag caaaaacttg tatttgacga tgatagtatt ttgaaaaata tatctgattt
     2941 tcatttggtg ttcagcaagc atttagatga gctcaagcaa caagtcaaag atctggatat
     3001 tgaaccactg gtaaattcac tttacgatgc ttttccagct agcattagta tcaaggatgc
     3061 ttgtaagtta ataaacaaag atgaactggt ttctaaaatt tattatttaa tggatactac
     3121 taatgcagtg attttacctc ataaagagct tgtagatata cagtataaac ctaaattctc
     3181 aaaacttaaa cctgtatata aaccttattt ggaatacttt ttaaataaac caaactcagt
     3241 tatatcttgt tcaactccta tgaatttact atttatagga aatcatatag agataatgac
     3301 tcttttgatg ttagatggac aaaattccct tgaagatata agcaaatttt tagaagaaga
     3361 gttcaaaaaa caaaaattaa ttccaaatgc tattataaat ggcaaacaaa ttccaataaa
     3421 agacgcaaaa tctaaaaaag agtttttcaa aaatgcggtt gcgacagtag cgtactctgc
     3481 tagaataaat tatttattag aaagaatgaa ttaattccaa aataatgcta taagatttat
//
LOCUS       DAPPKW010000134         3465 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.134, whole genome shotgun sequence.
ACCESSION   DAPPKW010000134 DAPPKW010000000
VERSION     DAPPKW010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3465
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.134"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            146..>3465
                     /locus_tag="RPW04_001898"
     CDS             146..>3465
                     /locus_tag="RPW04_001898"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295974.1"
                     /translation="MKIQIPITTIVGAKITLSTLLLCIPISSVAELNVNNNGNAISKG
                     QGNTYKPTDQSNNNVTITGNEPQGAEIYGGYSDSEETKSNTINVDPGTFIGNRYPNSQ
                     KNGGKVIGGKGTSSSNNKVEIKSSNTNSVTTIAGGVKNAELMGGYATTSESKNNTVLI
                     DNKTVFYGGYEQGYIAQHLKSNIYGGQSKSTATSNKVEIKKDIELTATSDNQHQFKIA
                     GGFVEAPNKNNGKAISSNNSVIITDAKLTAGLRFGNKLQHHTHIIGGEASVFWNFDYG
                     SAEAIGNMVNLTNVTIATHSSLKNPIIDIFGGLSKDATTDNVVTIKGNTKINWDGSGS
                     ASSTKIYIKGGNGYHQSNRNKVYIQDNSKIKAVEIIGGGSSQVASENLVIISGGTINV
                     PTIGGGSATNATNNQVTISGGKVTSSTIYGGNANKSANENKVTITEGTANIADIYGGK
                     SISNNSIANKNSITISDGTLQVTNIYGGHSAKDANENSIQISNGGNINNIVGGHAQDH
                     TNLNTINITGGTIQSVTGGNSGVVASQNYVNVSGGVVENYIIGGKSYSGSATKNSVIV
                     STDTSAIIIGGQGTNANAIENSVTISGGKVTNSIYGGKSTNSNANKNSVIISGDNTSI
                     TDKIYGGEGISASENRIEISNGKISGEIYGGYGTTVSKNSVTISGGTVTSNIYGGKSL
                     NGNSTENSVNISNGTITGNIYGGYAKVASKNVVAISGGTIVGNIYGGYSSGGGSSTGN
                     KIIISGSPDLSNATLYGADGKIAAPPPIEQNLAPKRVRRALADPADIQPLNDPPSDYK
                     SGNTLATQDSLNLKIKSIKNFSNLNLNIPRDMTTNDYILILGEDMDLSDLIITPQFNA
                     NNLNLNEGDTITLIGGFDDAKITGGDDANSIIPIPIPAPQPAPIPVIPAPIPVIPAPA
                     VPIVTPIIDPVIPAPIIPAPVVLVSEPKKTLFGVSQIITYTSVGNSKFVLGKKEPNPG
                     MKSFLESGVASIVSTNQAGDLASNEGIKNMVSQASSSNSFAALSNGRFRYKTGSHIDI
                     NGFSLIVGVSKEIESFTYGIFMEAGNANYNSYNDFAPNSIPNTNSIKGSGDTNYFGIG
                     VLLNTKLANNFYLDGSLRG"
BASE COUNT         1274 a          575 c          655 g          961 t
ORIGIN      
        1 gatttgagaa aaggaaggta tgacactttt tacacagatt tatttaaaat ttaaaagata
       61 attataaaaa tatttgaatt ttatgttaaa tttagctatg atggctgtag atttttaatc
      121 tagtaaatct taaaaaggca tacaaatgaa aattcagatt ccaatcacaa ccattgtcgg
      181 tgcaaagatt accttatcaa cactgttgtt atgcatacct atttcttccg tagccgagct
      241 taatgtaaat aataatggga atgcgatatc caaaggacaa ggtaatacat ataaaccaac
      301 agatcaatcc aataataatg tcacgattac aggaaatgag ccacaaggag cagaaatata
      361 tggtgggtat agtgatagtg aggaaactaa atcaaatact attaatgtag atcccggtac
      421 ttttataggc aatcgttatc cgaacagtca aaaaaacggt ggaaaagtta taggcggtaa
      481 aggcacctcc tcatcaaata acaaagttga gataaaaagt agcaatacta attccgttac
      541 tacaattgct ggtggagtga aaaatgcaga gcttatggga ggatatgcta cgacaagcga
      601 gtctaagaac aatacggtat taatagataa taaaaccgta ttttatggag gatatgaaca
      661 agggtatata gcccagcatt taaaaagcaa tatttatgga ggacagtcta aaagtactgc
      721 tactagtaac aaggtagaga taaaaaaaga tatagaatta actgctacaa gtgataacca
      781 gcatcaattt aaaatagcag gaggatttgt tgaagcacca aataaaaaca atggaaaagc
      841 aatatcatca aacaatagcg taattataac ggatgctaaa ttaactgccg ggcttcgatt
      901 tggtaataaa ttgcaacatc acacccatat cataggaggc gaggcaagcg tattttggaa
      961 ctttgattat ggtagcgctg aagcgatcgg caatatggta aatttaacaa acgttactat
     1021 agcaacacat tctagtctta agaatccgat cattgatatc tttggaggtt taagcaaaga
     1081 tgccacaaca gataatgtcg tcactataaa aggcaacaca aagataaatt gggatggaag
     1141 cggttcggca tcaagtacaa aaatatatat caaagggggc aacggttatc atcagtctaa
     1201 tagaaacaaa gtatatatac aagacaatag caaaataaaa gctgtagaaa tcataggtgg
     1261 cggaagctct caagtcgctt ctgaaaattt agttattata tctggaggca ctatcaacgt
     1321 tcctactata ggcggcggaa gtgctactaa tgcaacaaat aaccaagtta caatatctgg
     1381 tggaaaggtt acttctagca caatctatgg tggtaatgca aataaatctg ctaacgagaa
     1441 taaagtaact atcacagaag gtacggccaa tattgcagat atctatggag gaaaatctat
     1501 aagcaataat agtatagcta ataaaaactc gatcacaatc tctgatggaa cattgcaagt
     1561 tactaatatc tacggaggtc attcagctaa agacgctaat gaaaattcaa ttcaaatctc
     1621 taacgggggc aatataaaca atattgtagg cggtcatgct caagaccata ccaacttaaa
     1681 tacgattaat attaccggcg gtactatcca aagcgttact ggtggaaact ctggtgttgt
     1741 tgcatctcaa aactacgtaa atgtatctgg cggagtagtt gaaaattata ttatcggagg
     1801 taagtcatat agcggttctg caaccaagaa ttccgtaata gtatctacag atacttctgc
     1861 tatcattata ggcggacaag gcacaaatgc aaatgctatt gaaaattcgg ttacaatatc
     1921 tggcggaaag gttactaata gtatatacgg cggtaaatcc acaaacagca atgccaataa
     1981 aaactcggtt attatatctg gagataacac ttcaattacc gataaaatct atggcggtga
     2041 aggtataagt gcatctgaaa atagaataga aatctctaac ggaaaaatat cgggagaaat
     2101 ttacggtgga tatggaacaa cggtatctaa aaactcagtt acgatatctg gcggaacagt
     2161 tactagtaat atatacggcg gtaaatcact aaatggtaat tctactgaaa actcggttaa
     2221 tatatctaat ggaacaatca cgggaaatat ttatggagga tacgcaaaag tagcttctaa
     2281 gaatgtagta gcaatatcgg gcggaacaat agtaggaaat atttatggag gatatagcag
     2341 tggcggcggt agttctactg gaaataaaat catcatctca ggtagtccgg atctatcaaa
     2401 tgctacttta tacggcgccg atgggaagat agctgcaccc ccccccatag agcaaaattt
     2461 agcacccaaa agagttagga gggcacttgc agatccggca gatatccaac ctttaaatga
     2521 tcctccttct gattataaat caggaaacac tctagctact caagattcat taaatttaaa
     2581 aataaaatct ataaaaaact tttcaaattt aaatctgaat attccaagag atatgactac
     2641 aaatgattat atattaattt taggtgaaga tatggattta agcgacttaa taatcacacc
     2701 tcaatttaac gcaaataatc taaatttaaa tgaaggagat acaataactc ttataggagg
     2761 gtttgatgat gcaaagataa caggtggaga tgatgcaaac tctattattc ctattcctat
     2821 tccagcccct cagcctgctc ccattccagt aattcctgct cccattccag taattcctgc
     2881 tcctgcagtt cctattgtta ctccaattat agatcctgtt attcctgctc ccattattcc
     2941 tgctccggta gttcttgtta gcgaacctaa aaagactcta tttggagttt ctcaaatcat
     3001 tacttatact tcagtcggta atagtaagtt tgtattagga aaaaaagagc caaatccagg
     3061 aatgaaatct ttcttagaat caggcgttgc atctatagta tctacaaatc aagcaggtga
     3121 tctagcatca aatgaaggta taaaaaatat ggttagtcaa gctagcagtt caaactcatt
     3181 tgccgcactt agcaatggtc gctttcgtta taaaacggga tctcatatag atataaatgg
     3241 tttctcgctt atagttggtg tttctaaaga gatagagtct tttacgtacg gtatatttat
     3301 ggaagcagga aatgcaaatt ataatagcta taacgacttt gctcctaata gtattccaaa
     3361 taccaatagc ataaaaggaa gcggtgatac taattacttt ggtatcggag ttttactaaa
     3421 tactaaatta gcaaataact tctatttaga tggatcgctt agagg
//
LOCUS       DAPPKW010000135         3426 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.135, whole genome shotgun sequence.
ACCESSION   DAPPKW010000135 DAPPKW010000000
VERSION     DAPPKW010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3426)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3426)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3426
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.135"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            170..955
                     /locus_tag="RPW04_001899"
     CDS             170..955
                     /locus_tag="RPW04_001899"
                     /inference="COORDINATES: protein motif:HMM:NF025033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDX6295975.1"
                     /translation="MSNANAWDDMSNSYPRYNDSAMKKDVNFVLNWCEEIGVRFEGKS
                     IIDIGCGTGTVAIPLASKGAKVCGIDLSPGMLEVLENDAKTLGIDSLITTFISDWDSY
                     EIKDKFDIVLTSLTPALHSDENVIKAFSAAKDIGIYVGWGDYKKSKFLDILIDSHKQT
                     PQKPVRGCIKAAQFKDILDKNGILFKTTSFESSWENKLSMDQAINYSNAILKRCELIP
                     DSKIIDEVLAKFQQNDKVIISTDAQKSIILYAISDSAKKKYFS"
     gene            complement(1025..3064)
                     /locus_tag="RPW04_001900"
     CDS             complement(1025..3064)
                     /locus_tag="RPW04_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HDX6295976.1"
                     /translation="MALSKLNREQYTAATAPTGYNLVIASAGTGKTSTIVARIAHLLN
                     LGMKPERILLLTFTNKAASEMIDRLSNYFSAKTVGSIMAGTFHSVSNSLLKKLNKGVI
                     LKQPSELKTLLKSLVERREFHRIGEVKAYSGAYLYDVYSLFCNSCVNDESFAQWFSEN
                     YSDQTVYAEVYEDILREFEEQKSRFNYADFNDLLIKMRNELKKGAKVFYDEILVDEYQ
                     DTNSLQGSLIDSFNAKSLFCVGDFDQSIYAFNGANIDIIGSFTQRYKDAKVYSLNVNY
                     RSSAKILSLANKVIAQNPRLYPKELTVSRIGNFKSPSLLIYDELFLQYENISEIILNS
                     HYKKDDIAIIFRNNSSADGLEVALKEQGISCKRKGGVSFFESREIKALIDLIGIYINP
                     KDIMAFIHVFEYARGVGNASAKEIFDTLLALGDRSIVKGLLNPDKSVKVFERSKKNHQ
                     LGLFDDFSEFMDSARFTSLGLSKEFMENPVLNYSNLNTNGAIFLYELYKLLMQIQGKT
                     NSYEVVNSVINSGVYSIIVDFLATKRATLKNGNVDANLKDEAKDRIYAKSKVLLEMSK
                     RHNYCDVFYNFLTLGRTEMSEGEGVSLLTVHASKGLEFSLVFVVDLAQNRFPNLKLMG
                     MGGSLEEERRLFYVAVTRAKDELYLSYAKYDKIRKIDYKPSCFLEEAGIVKRFGI"
     gene            3213..3397
                     /locus_tag="RPW04_001901"
                     /pseudo
     CDS             3213..3397
                     /locus_tag="RPW04_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732019.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1179 a          615 c          501 g         1131 t
ORIGIN      
        1 aaaataaatt tatatatcta aatttttaga atttattgtg atataatatg atttttagtg
       61 cttcttatag tatataaatt tacagaaaat tatatgcata aattatttta atatataaaa
      121 ctatagttta atatatttta aattatacaa tacaacaaca aggagattta tgagtaacgc
      181 aaacgcatgg gacgatatgt caaattctta ccctcgctac aatgactcag caatgaaaaa
      241 agacgtaaat tttgtactta actggtgtga agaaataggt gtaagatttg aaggaaaaag
      301 tatcatagat ataggttgcg gaacaggaac agtagcaatt cctcttgcaa gcaaaggcgc
      361 taaagtatgc ggcatagatc tgtcgcccgg tatgcttgaa gtgttagaaa acgacgctaa
      421 aacactaggt atagactctt tgataacaac ttttataagc gactgggata gttacgaaat
      481 aaaagataaa tttgatatag ttttgacctc tttaactccg gctttgcata gtgatgaaaa
      541 tgttataaaa gcatttagcg cagctaaaga tataggaatt tacgtaggat ggggagatta
      601 taaaaaaagt aaatttcttg atattttgat agattcgcac aagcaaactc cgcaaaaacc
      661 agtacgcggc tgtataaaag cggctcaatt taaagatatt ttagataaaa acggtatttt
      721 gtttaaaact acatcttttg aaagttcatg ggaaaataag ctaagtatgg atcaagctat
      781 aaattattca aatgcgatac taaaaagatg tgagctaatt ccagatagca aaattataga
      841 tgaagtttta gcaaagtttc agcaaaacga caaagtaatt ataagcacag acgctcaaaa
      901 aagcataatt ttatatgcta tttcggactc tgctaagaaa aaatatttca gctaaaatcc
      961 aaaaaaactt tgccggctaa actctgttgg caaagctatt tttttatact tttgttacta
     1021 aatattaaat tccaaaacgt ttcacaatcc cggcttcttc taaaaaacag cttggcttgt
     1081 agtctatttt tctgattttg tcgtactttg catagcttag atatagctca tctttggccc
     1141 tagtaaccgc aacataaaaa agtcttcttt cttcttcaag actcccgccc atccccataa
     1201 gttttaaatt tggaaaacga ttttgagcta gatctactac aaaaaccaag ctaaactcaa
     1261 gacctttgct agcatgcact gttaataaac ttacgccctc accttcactc atttcagttc
     1321 ttccaagagt taaaaaatta taaaatacat cacagtaatt atgacgtttg ctcatctcta
     1381 aaagcacttt tgattttgca taaattctat cctttgcttc atcttttaaa tttgcatcga
     1441 catttccgtt ttttaaagta gctcttttag tagctaaaaa atcaacaata atagaataca
     1501 ctcctgagtt tatcaccgaa ttaaccactt cgtatgaatt tgtttttcct tgtatctgca
     1561 tcaataattt ataaagttcg tataaaaaaa tcgctccgtt ggtatttaaa ttcgagtaat
     1621 tcaaaaccgg attttccata aattctttac ttagaccaag actagtaaat ctagcgctat
     1681 ccataaactc actaaaatca tcaaaaagtc ctagctgatg attctttttt gaacgttcaa
     1741 aaaccttaac tgatttatcc ggatttaaaa gaccttttac aatgctccta tcacccaaag
     1801 ccaaaagagt atcaaatatc tcctttgcag aggcgtttcc gactccccta gcatattcaa
     1861 aaacatggat aaacgccata atatcttttg gatttatata aattccgatc aaatctataa
     1921 gtgcttttat ctcgcgtgat tcaaaaaagc taacgccgcc ttttctttta caactaattc
     1981 cttgctcttt caaagcgact tcaagtccgt ccgcgctcga attattgcga aaaattatcg
     2041 cgatatcgtc ttttttataa tgagaattta aaataatctc agatatattt tcatactgca
     2101 aaaacaactc atcataaatg agcaaacttg gagatttaaa atttccgatt ctgctaaccg
     2161 taagctcttt tggatatagt ctaggatttt gcgctattac tttatttgcc aaagataata
     2221 tctttgcgct acttctataa tttacattta aagaataaac tttcgcatct ttatatctct
     2281 gagtgaaact tcctattata tcaatatttg caccattaaa agcataaata ctctgatcaa
     2341 agtctcccac gcaaaataag ctttttgcat taaaagaatc tataagagag ccttgaagcg
     2401 agtttgtatc ttgatactca tctactaaaa tttcatcata aaataccttt gcgccctttt
     2461 ttagctcgtt tctcatttta ataagcaaat cattaaaatc cgcataatta aaacgtgatt
     2521 tttgctcctc aaattctctt aaaatatcct cataaacctc agcataaaca gtctgatcgc
     2581 tataattttc actaaaccac tgggcaaaac tttcatcatt cacacatgaa ttgcaaaaaa
     2641 gagaataaac atcataaaga tatgcgccgc tgtaagcttt tacttcacct atcctatgaa
     2701 attcgcgtct ttctaccaag ctttttaaaa gagttttcag ctcgcttggt tgttttaaga
     2761 taacgccttt atttaacttt tttaaaagcg aatttgaaac agaatgaaaa gtccctgcca
     2821 tgatagaacc gaccgttttt gcactaaaat aatttgataa tctatctatc atttcacttg
     2881 cggctttatt tgtaaaagta agtagcagta tccgctctgg tttcatacct aaatttaaaa
     2941 gatgagctat gcgagccaca atcgtactag tttttccggt gcctgcgcta gctattacta
     3001 gattataccc cgttggagcg gttgcggctg tgtattgttc gcggtttagt ttgctaagcg
     3061 ccattttatt ccttaaattt caaaagtagc aattgtatca aactagttct taaatttcag
     3121 tcaaagagat agaaaataca gcacccaact aatcaaattt aaataaatta tgatatcctt
     3181 gattttttta tttaaattta taaaggagaa aaatgcatta ctttgtctat ccaaatggcg
     3241 gacactcgca tatactagct tataatctaa acttactagg tcatacatgc tcgtttttag
     3301 acgattttaa aaccggtgct aagctagaag aaaacttaga aaaaatagta gggggggggt
     3361 acggcggttc tttagccacg gatacttgca cttataagtc tagagaaata agagctaaac
     3421 ttatat
//
LOCUS       DAPPKW010000136         3420 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.136, whole genome shotgun sequence.
ACCESSION   DAPPKW010000136 DAPPKW010000000
VERSION     DAPPKW010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3420)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3420)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3420
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.136"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..1384
                     /locus_tag="RPW04_001902"
     CDS             <1..1384
                     /locus_tag="RPW04_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDX6295977.1"
                     /translation="NTFNIGAKFNYLVDDRNSIILDIDYSKNHYNNKNSEIGTLTKKN
                     PNGSLTGGYTPTMDISKIVTYLAHEGIYDAFTLNSAVQYNRVTNDGREVVGQPTQAFL
                     GQNRDIKAEDFMLDTKAVVPIGNRNILSVGAEYRLEKMHDKIANPTSFDQYMLAVYAE
                     DEITILENLLLTLGGRYNHHEIFGNNISPRAYLVYNATDNLTLKGGVSTGFKAPYANR
                     LIAGEYNFSGQGKYPVYGNPNLKEETSVNYEFGAIYDTGIFSTSLTGFLTTFEDKISS
                     KTYKTGQSVPSIGVCGAARCLQAINHGEVEYKGLEFAAGVKPIKDLNIDLSWTYTDSE
                     VKDSIDSTSIGKPEINSLKHNIVAKASYMIFNKFTPWIKGEYQIDRYMGDSNLNREYY
                     KNIFLASAGMRYDINKNWNVNLGIYNLLDKDFTDSYESYTSANTQTWVNTYNRIEEGR
                     RFYLSLNGNF"
     gene            1558..1722
                     /locus_tag="RPW04_001903"
     CDS             1558..1722
                     /locus_tag="RPW04_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000394826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295978.1"
                     /translation="MEFLGLILAFIAVFLIYKKPQKEKFAFGIFVVAWAMAAIMYIAH
                     VSSILPNINL"
     gene            1733..3232
                     /locus_tag="RPW04_001904"
     CDS             1733..3232
                     /locus_tag="RPW04_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HDX6295979.1"
                     /translation="MRNTKTFYLLFSLAAIGILALPVGIANFIFGYILGDSPCTLCWG
                     QRQSMIYISVAALFVLRYGFKPKYLAMILIITAVGLWESFYHLGNHALEDVGQGFGVA
                     ILGLHTQFWAEVVFWAVVFLLGVILFFAPNLKEFEDEAYKFRKLTSANIVAFWVFFIV
                     IVSNIVQAFISTGPPPFLGQGDPVRYSWNSKYTIWSADGWKDMRFPTNFLGKRDVNFP
                     DLALDASEDFEFDSDYSNSPLVVEEELEIIDKKISSLNLNSPISDLNYQNDNMLVSTE
                     EYGLYITDKDLANISSHLVLDKYFSATVEKFAGANFVGDNIRIMGINKTSVDVKPNPS
                     ANKVANFRYFLEGADKFDEISRYRLKTSRAKNYYVLTSRSDKKHTYMITVPNNKYKEL
                     IVVSALNSDKGLSAEFIPELGDNVKLKDARSLGELYISALAIKDDMLYAASKAYNTLL
                     LIDPKDQIITKAYGFPKDILNIRAMTFVDDKILISSYENGKDVLYTLEF"
BASE COUNT         1185 a          483 c          636 g         1116 t
ORIGIN      
        1 aaatacattt aatataggag ctaaatttaa ctatttagtg gacgatagaa atagtattat
       61 attggatata gactactcta aaaatcacta taataataaa aatagtgaaa taggaactct
      121 cacgaaaaaa aatccaaacg gaagccttac tggcggatat acgcctacta tggatatatc
      181 aaagatagtt acatatcttg ctcacgaagg catatatgat gcatttactt taaattcggc
      241 tgtgcagtat aatcgcgtta caaatgacgg aagagaggtt gtgggtcagc caactcaagc
      301 gtttctcggt caaaatagag atataaaagc cgaagatttt atgctagata ctaaagcagt
      361 tgttcctata ggaaatagaa atatattaag tgtcggcgcc gagtatcgcc ttgaaaaaat
      421 gcatgataaa atagcaaatc caacgagttt tgatcaatat atgctcgctg tttatgcaga
      481 agatgagata acaatcttag aaaatttgct tttaacttta ggcggtagat ataaccatca
      541 tgaaatattt ggcaataaca tatctccaag agcatatcta gtttataacg ctactgataa
      601 tttaacgtta aaaggcggcg tttctactgg ttttaaagct ccatatgcaa atagactaat
      661 tgccggagag tataacttta gcggtcaagg aaaatatccc gtatatggaa atccgaattt
      721 aaaagaggaa acttctgtaa attatgaatt tggtgcaatt tatgatactg gaatattcag
      781 cacgtcttta accggatttt taaccacgtt tgaagataaa atttcaagta aaacttataa
      841 aacaggtcaa tccgttccta gtataggagt gtgtggcgcg gctcgctgct tacaagctat
      901 aaatcacggt gaagtagagt acaaaggttt agagtttgca gcaggagtaa agccgataaa
      961 agatttaaac attgatcttt catggacata tacagacagc gaagttaaag atagcataga
     1021 tagtaccagc ataggaaaac cagagatcaa cagtctaaaa cacaatatag tcgcaaaagc
     1081 atcttatatg atatttaata aatttacgcc ttggataaaa ggcgaatatc aaatagacag
     1141 atatatggga gattcaaatt taaatcgaga atattataaa aatatatttt tagcttcggc
     1201 aggtatgcgt tatgatataa ataaaaattg gaatgtaaat ttaggtattt ataatctgct
     1261 agataaagat tttacggata gttacgagtc ttatactagt gcaaatacgc aaacgtgggt
     1321 aaatacttat aatagaatag aagaaggcag aagattttat ctatctttaa acggtaattt
     1381 ctagattttg cgttattaaa attatattaa atcagacatg tttggcttgt tgttaaattt
     1441 aagccaaact tttattgaat ttatatttta tatcaaaaaa tagattgtaa ccgagataaa
     1501 atttgattga atttaaaaag tgtaattatg ataatatcta aacataagga gaaagtaatg
     1561 gaatttctag gactcattct agcatttatt gctgtatttt tgatctacaa aaaaccgcaa
     1621 aaagagaaat tcgcttttgg aatttttgtt gttgcttggg ctatggctgc tattatgtat
     1681 atagctcatg tttcgagtat tttaccaaat attaatctct aaaggagcaa ctatgcgaaa
     1741 tacaaaaaca ttttatctgc tattttcatt agcggcaata ggtattttag cgcttccggt
     1801 cgggattgct aattttattt tcggatatat tcttggcgat tcgccttgca cactttgttg
     1861 gggtcagcgt caaagcatga tatatatctc ggttgcggct ttgtttgttt tgagatatgg
     1921 atttaagcca aaatatttag ctatgatact tattatcact gcagttggtt tatgggagag
     1981 tttttatcat ttaggaaatc acgcattaga agatgttgga cagggatttg gcgtagcgat
     2041 tttaggtttg catacgcagt tttgggctga agttgtattt tgggctgtag tgtttttgtt
     2101 gggagttata ttatttttcg ctccaaattt aaaagaattt gaagatgaag cctataaatt
     2161 tagaaaatta acaagtgcaa acatagtcgc cttttgggta ttttttatag ttatcgtttc
     2221 aaatatcgtg caagcattta tttctacagg accgccgccg tttttaggtc aaggagatcc
     2281 ggttcgatat agttggaata gcaaatatac aatttggtct gccgatggat ggaaagatat
     2341 gagattcccg actaattttc ttggaaaaag agatgtcaat tttcctgatc tcgctcttga
     2401 cgcatctgag gattttgaat ttgatagcga ctactcaaat tcgcctcttg ttgtagaaga
     2461 ggagttagaa atcatcgata aaaaaatcag ctctttaaat ttaaactcac ctataagtga
     2521 tttaaattat caaaatgata atatgctcgt atctacagaa gaatacggtt tatatataac
     2581 agataaagat cttgcgaata taagctcgca tttagttcta gataaatatt tttctgctac
     2641 tgttgagaaa tttgccggag caaatttcgt aggcgataat atacgcatta tgggaataaa
     2701 caaaaccagc gttgatgtca agccaaatcc atctgcaaat aaagtagcaa attttcgata
     2761 ttttttagaa ggagcagata aatttgatga aatcagtaga tatagactca aaactagcag
     2821 agctaaaaac tactatgtgt taacatctag aagtgataaa aaacatacgt acatgataac
     2881 tgtgccaaat aacaagtata aagaactaat agttgtttcc gctttaaata gcgataaagg
     2941 attatctgct gagttcattc ccgagcttgg agataatgtg aaattaaaag atgcaagaag
     3001 cttaggtgag ctctatattt cggcattagc cataaaagac gatatgcttt acgccgcaag
     3061 taaagcttac aatactttgt tgttaataga cccaaaagat cagatcataa ctaaagctta
     3121 tggttttcca aaagatattt taaatatccg tgctatgacg tttgtagatg ataaaatttt
     3181 gatttcaagt tatgaaaacg gtaaagatgt tctttatacg ttggagtttt gatctctgat
     3241 aagattaaga gataaaaccg gataataaat ttgagcttaa taaaagctca aatttaaccc
     3301 ggttagaatt tctttttatt gacttcgtta aatacttcgt ttgctatact ctctacctca
     3361 ttagttatct tattactatt ttgagctata gtgacatttt gtttagtctg ctcatctacc
//
LOCUS       DAPPKW010000137         3392 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.137, whole genome shotgun sequence.
ACCESSION   DAPPKW010000137 DAPPKW010000000
VERSION     DAPPKW010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3392
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.137"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(162..347)
                     /locus_tag="RPW04_001905"
     CDS             complement(162..347)
                     /locus_tag="RPW04_001905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295980.1"
                     /translation="MNNIDIIGFAMIEESNKTIEQIAREGLHSLEVAIENFAPFCFWP
                     LVIIGIVTALIWSATKN"
     gene            complement(628..882)
                     /locus_tag="RPW04_001906"
     CDS             complement(628..882)
                     /locus_tag="RPW04_001906"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295981.1"
                     /translation="MGTIDELKSELRLFKIVITAIFSICLFYLTFHSEQGIFDKVCFL
                     SFFGYLQYHFIMGYFETKRAIKFYQELIDKYKKERNIIYE"
     gene            complement(1005..2033)
                     /locus_tag="RPW04_001907"
     CDS             complement(1005..2033)
                     /locus_tag="RPW04_001907"
                     /inference="COORDINATES: protein motif:HMM:NF024872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDX6295982.1"
                     /translation="MKSAAHLQNDDILSKYILNIKGLKLLDTKNTKFEWLIPNFISKQ
                     SLNMIYAGAGSGKTMFALHLCNYLIKNNAKIDEILYFDADNGVDMLQNRQADKIVDDS
                     NGKLKYILSNSLSRFGLFKNINKKAKFGDLKNKLVIIDSVRNFIKGSLSKDENITKFM
                     ADLQSIRDKGATIIFLHHQPKQGMDKNDENYKGATAFMDSVDEAYYLQNETDNAIVAD
                     NTMILSLKPKKRRSHTKEAVVQIDTKNLSLEFIKDDFFGLNEKEKISLQLAKEIVDQK
                     SEISQSDLANAIQKLANKNYLEIVGRNTLWKLFDKFDGKLFKIKRLKGYGNCNKKIFC
                     NIENVEEK"
     gene            complement(2065..2304)
                     /locus_tag="RPW04_001908"
     CDS             complement(2065..2304)
                     /locus_tag="RPW04_001908"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295983.1"
                     /translation="MIEIVDNQEIKMQGDFISPEQFEEMFGISKSKQNRLRFRRNYTE
                     KYSSKIPPLPYIRIGKKILYSIASVNEWLKKQEIK"
     gene            2435..3124
                     /locus_tag="RPW04_001909"
     CDS             2435..3124
                     /locus_tag="RPW04_001909"
                     /inference="COORDINATES: protein motif:HMM:NF024252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDX6295984.1"
                     /translation="MKTNGYGDKLRKLRNAYGLTQSEFGDKIGISRVRVNSYENNITP
                     LPMQVKYKIAEATGINIEYFDNDIDLATAISKYGISSENGKLQIKTNKETICTIYDDL
                     YDFANGRYSIDPYLQKVQILTKLFNLSKPYDYNFVVATNKKAIPFASDGDILVIVKDN
                     IPKDNALLILKVNDEILVKYCRINPFNQNIKLFSTNDDFSNIELSQKELYGVEFLGYI
                     VNIFRNYQPEV"
BASE COUNT         1119 a          568 c          417 g         1288 t
ORIGIN      
        1 aatcatttat gaaaagcaat taacaaagac gcaagcactc caaaaaataa taagaaaaca
       61 ataacgttca ttgcaaaacc tattatgtct atattattca tctgttttat cctttaaact
      121 gaatatctct aagttcaata tctcttatat tgtcgcaaca ttcaattctt tgttgcagac
      181 catatgagag ctgtaactat tcctattatc acaagtggcc aaaagcaaaa gggagcaaaa
      241 ttttcaattg ccacttctaa agaatgcaaa ccttctcttg ctatttgctc tatggtttta
      301 ttgctttctt ctatcattgc aaaacctatt atgtctatat tattcatctg ttttatcctt
      361 taaactgaat atctctaagt tcaatatctc ttatattgtc gcaacattca attctctgct
      421 gcagacaata ttagtggctt ttaacacaaa attacctttc tcaaaataga aagaaatttc
      481 acccatattt atactcctca gtttagattt ttaaaccgga tagtaagata cttttaatgt
      541 gttgtagctt aaatttataa atttccaact cctgactatt aaagtaaagt ggcaaaattt
      601 cggttaaaag tatttttaac ttctatatta ttcatagatg atatttctct ctttcttata
      661 tttatctatc aattcttggt aaaatttgat tgctcttttt gtttcaaaat accccattat
      721 aaaatgatac tggagatatc caaaaaatga taaaaagcaa actttatcaa aaataccttg
      781 ttctgaatga aacgtcagat aaaataagca tatactaaaa atcgccgtaa ttactatttt
      841 aaacaatcta agctcacttt ttaactcatc tatagttccc attggataca tcctaaattt
      901 taatcaattt tcattgctct aactttgttt tttagctctt cttattttac tttctctctt
      961 gcgcttacac tatcttttgt tctttatttt gttccataat ttcctcattt ttcttccaca
     1021 ttttcaatat tacaaaatat ctttttattg caattgccat atccttttag acgtttgatc
     1081 ttaaaaagct tgccatcaaa tttatcaaac aacttccata gtgtattgcg accgactatc
     1141 tcaagatagt ttttgtttgc taacttttgt atagcattag caagatcgct ttgagaaatt
     1201 tcgctttttt gatctacaat ctcttttgct agttgtaatg aaattttttc cttttcattt
     1261 aatccaaaaa aatcatcttt gataaattct aggctcaaat ttttagtatc tatttgaact
     1321 actgcttctt ttgtatggct tcgacgcttc tttggcttta agcttaaaat cattgtattg
     1381 tcggcaacta ttgcattgtc ggtttcattt tgcagataat acgcttcatc cacactatcc
     1441 ataaaagcag ttgcaccttt gtagttttca tcatttttat ccataccttg cttcggttga
     1501 tggtgtaaga aaataatagt agccccttta tccctaatgc tttgcagatc cgccataaat
     1561 ttggtaatat tttcatcttt acttagactg cccttgatga aatttctaac actatcaata
     1621 atgacaagtt tattttttaa atcgccaaat ttagcttttt tatttatatt tttaaaaaga
     1681 ccaaacctac ttaggctatt tgatagaatg tattttaact tgccattact atcatcaaca
     1741 atcttatcgg cttgcctatt ttgtaacata tcgacgccat tatcggcatc aaaatataaa
     1801 atttcatcga ttttggcatt attttttatc agataattac aaagatgtag tgcgaacatt
     1861 gtttttccac taccagcacc agcatagatc atatttaggc tttgctttga tataaaattt
     1921 ggtattagcc actcaaattt tgtatttttt gtatccaaaa gttttaaacc cttgatattt
     1981 aagatatatt ttgataaaat atcgtcgttc tgtaggtggg ctgctgactt catattgtag
     2041 cccccttaaa ttctaacttc tccattattt aatctcttgt tttttaagcc actcatttac
     2101 actagctata ctatataaga tttttttgcc tattctaata tatggcaacg gtggaatttt
     2161 agaactatat ttttcagtat agtttcttct aaacctaagt ctattttgct ttgatttgct
     2221 tataccaaac atctcttcaa actgctccgg cgatataaaa tctccttgca ttttgatttc
     2281 ttggttatcc actatttcaa tcattttgaa acctttatat aaaattataa aaatcaaaaa
     2341 tcattttaaa tcattaatgc ttatttttta cttaatatat taaaatattg cctagttttt
     2401 gatataatat tattaaaaac tatggaaaaa taatatgaaa acaaacggat acggcgataa
     2461 attaagaaaa ttacgcaatg cttacggact tacacaaagt gaatttggtg acaagatagg
     2521 aataagtaga gttagggtta attcctatga aaacaacatt accccacttc ctatgcaagt
     2581 aaaatacaaa atagctgagg ctactggtat taatattgaa tattttgata acgatataga
     2641 tttggctact gcaatcagta aatacggaat aagttccgaa aatggcaaac tgcaaataaa
     2701 aaccaataaa gagacaattt gcaccatata cgatgactta tacgactttg caaatggtag
     2761 gtatagcatt gatccatatc tgcaaaaggt tcaaatttta acaaagctct ttaatttatc
     2821 aaagccatat gactataatt ttgtagtcgc cactaacaaa aaagctatcc catttgcaag
     2881 cgatggagat attttagtga tcgtaaaaga caatatacca aaagacaatg ctcttttgat
     2941 cttaaaagta aatgatgaaa ttctagttaa gtattgcaga ataaatccct tcaatcaaaa
     3001 tattaagctt ttttcaacca atgatgattt ttcaaatatt gagttatcac aaaaagaact
     3061 ttacggagtt gaatttttag gatatattgt aaatatcttt agaaattatc aacctgaagt
     3121 ctaattttaa acataatttt ttctttattg gtatgggggt ttgggggctt gcccccatgt
     3181 ttcaagtaaa agttcaaaat ttggctttgc caaattttga tttacctatt gtcctggttt
     3241 tgtttctttt tcaaaagaca atagttcccc ttcctttata ctttcgtaag tgtataagtg
     3301 tattagtaga tttttgacaa taaaaaacaa ctaattataa cttgtaaaaa ataaataaat
     3361 tataaacaat acaaataagc taatatggta at
//
LOCUS       DAPPKW010000138         3345 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.138, whole genome shotgun sequence.
ACCESSION   DAPPKW010000138 DAPPKW010000000
VERSION     DAPPKW010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3345)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3345)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3345
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.138"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            225..650
                     /locus_tag="RPW04_001910"
     CDS             225..650
                     /locus_tag="RPW04_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1924 domain-containing protein"
                     /protein_id="HDX6295985.1"
                     /translation="MKKIVYALACACMMSGTAIGAELNTQMKAYIESLKAEILKNDRN
                     FKDFDADRGEAIFKTKSIGKNGQNISCESCHGSDLTKSANNVFTNKILEPLSPNANSS
                     RLTDVKDVQRWLKRNFKDVYQREGTALEKGDVLYYILSK"
     gene            660..1166
                     /locus_tag="RPW04_001911"
     CDS             660..1166
                     /locus_tag="RPW04_001911"
                     /inference="COORDINATES: protein motif:HMM:NF021165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diheme cytochrome c"
                     /protein_id="HDX6295986.1"
                     /translation="MRILIVVCLAFIMLYAKGPKGPEVRPVDNDLYKKECASCHFGYQ
                     PGLMSSKSWIWIMQNLENHYGSDASIDEQSSKDILAYLLSNASEKALMYKRSVKLTKS
                     MQNGVLYKSITEIPYHIKKHKKLEKWMINQKEVKTLSNCSACHKYADKGMYGKKGIDI
                     PNYGQWRE"
     gene            1159..2256
                     /locus_tag="RPW04_001912"
     CDS             1159..2256
                     /locus_tag="RPW04_001912"
                     /inference="COORDINATES: protein
                     motif:HMM:NF013460.1,HMM:NF021165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HDX6295987.1"
                     /translation="MNKSYIWGFGSRFCHITLIISFILSYLFIETETSLYYHAVFGIV
                     FGVAIAFRVIWGFIGTKYSKFSDFKFKGIMEYLLPTYSQKKHYTGHNPASSIAAVVIM
                     VLGTIVLVSGLMMYGLSENSGIFAFLYTHYSKFRFVQNIHFISSNLLLWVVIIHICGA
                     TIDKFIDKNDAVDSMISGYKKTSINVSISMNNTQKAFCVFWVAAIVCTGAYLALYKSN
                     IVLQSRASKIDYTNLNKNFAKECGSCHIIYPPFLLPQKPWEIMMSNLENHFGDDASID
                     DETNRNILEFLVKNAAQNTDNKIAFNILQNTQDNEISITKYKYWIDSHKNIDEKVFKY
                     VDIKSKSNCGACHKNIENGIIQKSLINYKKL"
     gene            2270..2938
                     /locus_tag="RPW04_001913"
     CDS             2270..2938
                     /locus_tag="RPW04_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDX6295988.1"
                     /translation="MSNIMLIEDDLEMQELLKDYLENYGFKVHAFADPKIALEELKKG
                     EFVLVILDLMLPKIDGFEVCKMIRVFSTIAIIISSARGNLGDKVLAFEYGADDYLAKP
                     YEPKELIIRINAVLRRIVKSEEDAKKRFIGEFCIDEEKLEIQIDNHILELTKIEYEIL
                     LLMLNSKGKVVSRGEIAAHIKADLKDRSIDMHISNLRNKIFDDPKYPKYIKSVWGIGY
                     KFIG"
     gene            2943..3335
                     /locus_tag="RPW04_001914"
     CDS             2943..3335
                     /locus_tag="RPW04_001914"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295989.1"
                     /translation="MSIFKKLVILLVISFVLMSLLSYKTNDINDEKTILLYKERYKKN
                     ANDILSFLMLDDTKSLLERLKIMGFSIVDKPKDISKYKNIYEQNIDLGEMKIYKKGGI
                     LYLALEYMGNEIFICDETQISQNREKIY"
BASE COUNT         1308 a          434 c          604 g          999 t
ORIGIN      
        1 ttgtttttta taaatttaat atttttaaat ttactaatcc cctcttcttt tttctctctt
       61 tcttttttcc atcttactca cggtttaaat ttaatctttt attttgattt ttcaatttta
      121 tactattaaa tttgtcagca atgtgtcaat aaattgtatt tttaaatctg acaaaagttc
      181 tatataattt taaaataaaa atttaattta caaacggagt taaaatgaaa aaaatagttt
      241 atgcgttagc ctgtgcttgt atgatgagtg gcacggctat tggagctgag ctaaatacac
      301 agatgaaagc gtacatagag agtttaaaag ctgaaatttt gaaaaatgat aggaatttta
      361 aggattttga cgctgatcgc ggagaagcga tatttaaaac aaaaagcata gggaaaaacg
      421 gtcaaaatat atcttgtgaa agctgtcacg gaagcgatct tacaaaaagt gcaaacaacg
      481 tatttacgaa taaaatattg gagccgctat cgcctaatgc aaatagctca agacttacgg
      541 acgtaaaaga cgtgcaaaga tggcttaaaa gaaattttaa agacgtatat caaagagaag
      601 gaactgcgct agaaaaaggt gatgttcttt actatatctt atcaaagtaa gggtttaaaa
      661 tgagaatttt aatagtcgta tgtttggctt ttataatgtt gtatgcgaaa ggtcctaagg
      721 gtcccgaggt aagacccgtg gataatgatc tgtacaaaaa agagtgtgct agctgtcatt
      781 ttggctatca accaggatta atgtctagca agtcatggat atggataatg caaaacttgg
      841 aaaatcacta cggaagcgat gctagtatag atgagcaaag tagtaaagat atactagcat
      901 atcttttatc aaatgcaagc gaaaaagcac ttatgtataa aagaagcgtt aagctaacaa
      961 aatcaatgca aaacggagtt ttatacaaat ctatcacgga aattccatat cacataaaaa
     1021 aacataaaaa gctggaaaaa tggatgataa atcaaaaaga ggtaaaaact ctatcaaact
     1081 gtagtgcatg tcataaatac gccgataaag gtatgtatgg aaaaaaaggg atagatatac
     1141 caaattacgg acaatggcgt gaataaaagt tatatatggg gttttggctc gagattttgt
     1201 catataacac ttataataag ttttatttta tcatacctgt ttatagagac ggaaacttct
     1261 ttatactatc acgcggtgtt tggtattgtg tttggcgtgg caatagcttt tcgcgtgatt
     1321 tggggattta tcggtactaa atactcaaaa tttagtgatt ttaaatttaa aggaataatg
     1381 gaatatctac tacctacgta ttcacaaaaa aagcattata cggggcataa tccggcatca
     1441 agtatagctg ctgtcgtcat tatggttttg ggaactatcg ttttggtatc tggactaatg
     1501 atgtacggtt tgagcgaaaa tagcggaata tttgcgtttt tatacactca ttatagtaaa
     1561 tttcggtttg tacaaaacat acacttcatc tcttcaaatt tacttttatg ggtagttata
     1621 atacatatat gcggtgcaac tatagataaa tttatagata aaaacgacgc cgtggattcg
     1681 atgataagcg gatataaaaa aacttcaata aacgtaagta taagcatgaa caatacacaa
     1741 aaagcatttt gtgtattttg ggtagcggct atagtttgca caggtgcgta cttggcgctt
     1801 tacaaatcaa acatagtttt acaaagcaga gcttcaaaga tagactacac aaatttaaac
     1861 aaaaattttg ctaaagagtg cggaagctgc catatcatat atcctccgtt tttgctgcct
     1921 caaaagccgt gggaaataat gatgtcaaat ttagaaaatc attttggcga tgacgcgtct
     1981 atagatgatg aaacaaatag aaatatactc gagttcttag tgaaaaatgc ggctcaaaat
     2041 acagacaata aaatagcttt taatatctta caaaatactc aagacaatga aatatccata
     2101 acaaaatata aatactggat agatagtcat aaaaatatag atgaaaaagt atttaaatac
     2161 gtagatataa aatcaaaatc aaactgcggc gcatgtcata aaaacataga aaatggtata
     2221 attcaaaaga gcttgataaa ttataaaaaa ttatagctaa gaaggtaaaa tgagcaacat
     2281 aatgctaatt gaagacgacc ttgagatgca agaactctta aaagattact tagaaaatta
     2341 cggatttaaa gtgcatgctt ttgcagatcc taaaatcgca cttgaagagc tgaaaaaagg
     2401 cgaattcgta ctagttatac ttgatcttat gttaccaaaa atagatggat ttgaagtatg
     2461 caaaatgata agagtattta gcaccatagc tataataatc tcaagcgcga gaggaaattt
     2521 aggagataag gttttagctt ttgagtatgg agctgatgac tacttagcaa aaccgtatga
     2581 gccaaaagag ctaataataa gaataaacgc ggtattaaga cgaatagtaa agagtgaaga
     2641 agatgctaaa aagagattta taggcgagtt ttgtatagat gaagaaaagc ttgaaattca
     2701 gatcgacaat catattttag aacttactaa aatagagtat gaaatcttac ttttaatgct
     2761 aaatagcaaa ggaaaagtag tatcaagagg cgagatagcc gcacatataa aagcggatct
     2821 aaaagataga agtatagata tgcatataag caatctacga aataaaattt ttgatgatcc
     2881 aaaataccca aaatatatca aatccgtttg gggaatcggt tataagttta taggttaaaa
     2941 atatgtcaat atttaaaaaa ctagttatac ttcttgtcat cagctttgtg ttaatgagtc
     3001 ttttatcata taaaacaaat gatataaatg atgaaaaaac catacttttg tacaaagaac
     3061 gatataaaaa aaatgcaaat gacatactta gctttttaat gttagatgat acaaaaagcc
     3121 tcctagaaag actcaaaata atgggatttt cgatagtaga taaaccaaaa gatataagca
     3181 aatacaaaaa tatatatgaa caaaatattg acttaggaga gatgaaaata tacaaaaaag
     3241 gtggtatttt gtatttagct ttggagtata tgggtaatga gatatttata tgcgacgaaa
     3301 cgcaaatatc gcaaaatagg gaaaaaatat attaaatttt atgat
//
LOCUS       DAPPKW010000139         3318 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.139, whole genome shotgun sequence.
ACCESSION   DAPPKW010000139 DAPPKW010000000
VERSION     DAPPKW010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3318
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.139"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..994
                     /gene="pseB"
                     /locus_tag="RPW04_001915"
     CDS             <1..994
                     /gene="pseB"
                     /locus_tag="RPW04_001915"
                     /EC_number="4.2.1.115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002953858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 4,6-dehydratase
                     (inverting)"
                     /protein_id="HDX6295990.1"
                     /translation="FNGKNILITGGTGSFGKKYTQILLQNYKPNKIIIYSRDELKQYE
                     MASEFGQKCMRYFIGDVRDEKRLKTAMNGVDYVIHAAAMKHVPIAEYNPMECIKTNIS
                     GAQNVINSSLECGVQKVIALSTDKACNPVNLYGATKLASDKLFIAANNIAGSKPTRFS
                     VVRYGNVVGSRGSVVPLFKKLIKNGAKELPITDTRMTRFWITLENGVKFVLKNFERMQ
                     GGELFIPKIPSMKMIDLAKALAPNLDIKVIGIRPGEKLHETMISKDDAHLTYEFSDHY
                     VITPSIQFLTEPNFSQNLILEKGIKVDDEFEYSSDKNEAWLDANGLNTMLESVQ"
     gene            1029..1478
                     /gene="pseH"
                     /locus_tag="RPW04_001916"
     CDS             1029..1478
                     /gene="pseH"
                     /locus_tag="RPW04_001916"
                     /EC_number="2.3.1.202"
                     /inference="COORDINATES: protein motif:HMM:TIGR03585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4,
                     6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase"
                     /protein_id="HDX6295991.1"
                     /translation="MIWVKNFINLNNDEILAVFKARTDPRTTAFCIRNNFNFDEHLSF
                     VRSLKFRNDKAYFMIYDDESFIAVISFVDISANQAEFGLYKTPGTKSVGKVLMNQMIK
                     LAYSLNLKTIKAKVLKHNLKAINLYKEFGFEIYYEDKEIFYIKRIID"
     gene            complement(1675..3234)
                     /locus_tag="RPW04_001917"
     CDS             complement(1675..3234)
                     /locus_tag="RPW04_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin B"
                     /protein_id="HDX6295992.1"
                     /translation="MSFRINTNIAAMNAHANAVGNNRDLSGSLGKLSSGLRIQTAADD
                     ASGMTIADSLRSQANALGQSIKNGNDAIGIVQTADKAMDEQIKILDTIKTKAIQAAQD
                     GQNSDSRRALQNDITRLLEELDNIANTTAFNGQQLLNGSFSNKNFQIGAYSNETAKVS
                     IGATSSNTIGHTRFETSENVVYTKGMGLSANTGGVTITLKGIDGMPGGDYKFQTISSG
                     VYASQGLAAVADQINAVADKTGVKASVNNTQVFNGINGVGIQSASVQDLTINGVQIGN
                     ISVQNKDADNVLIAAINKVKDQTGVEASKENGKLTLATKDGRAIHIGGTGISRIGITQ
                     AKGGANVTFMGLISFTRQDARDIVMVMSVAGGGAATAGISAGLQNSRVNQASVSLKTI
                     NDSVISATVAAAMGFFKAGETPIDKRGVGGVNTYAGAQAMINVAEAARKTLDTIRSDL
                     GSVQNQLVSTINNISVTQVNVKSAESQIRDVDFAEESANFSKYNILAQSGSYAMSQAN
                     AVQQNVLKLLQ"
BASE COUNT         1091 a          599 c          559 g         1069 t
ORIGIN      
        1 gtttaatggc aaaaatattt tgataactgg cggaaccgga agttttggca aaaaatatac
       61 gcaaatattg ctacaaaatt acaaaccaaa taaaataata atctactcac gagacgaact
      121 aaaacagtac gaaatggcaa gtgaatttgg tcaaaaatgc atgcgctact ttatcggaga
      181 cgtaagagat gaaaaacgcc ttaaaactgc gatgaacggt gtggattacg ttattcacgc
      241 tgctgctatg aaacatgttc ctatagctga gtacaatcct atggaatgta tcaaaacaaa
      301 cataagcgga gcgcaaaacg ttataaactc gagccttgaa tgcggtgttc aaaaagtcat
      361 cgctcttagt acagataaag cttgcaatcc agtaaattta tacggagcga caaaacttgc
      421 aagtgacaaa ctatttatcg ctgcaaataa catagcagga agcaaaccga ctcgttttag
      481 tgtcgttcgt tacggaaatg tggttggatc acgcggctca gtcgtgccgt tatttaaaaa
      541 actgataaag aacggcgcaa aagaactccc cataacagat acaagaatga ctagattttg
      601 gatcactctt gaaaatggcg taaaattcgt actgaaaaac tttgagagaa tgcaaggagg
      661 agaattattt atacctaaaa ttccatctat gaaaatgatc gatttagcta aagctttggc
      721 tccaaattta gacatcaaag ttatcgggat aaggcctggt gaaaagttac atgaaactat
      781 gataagcaaa gacgatgctc acttgactta tgaatttagc gatcattatg tgattactcc
      841 atctatacaa tttttaacag aaccgaattt cagtcaaaat ttaattcttg aaaaaggcat
      901 aaaagtcgat gatgagtttg agtatagttc agataaaaat gaagcgtggc tagatgctaa
      961 tgggctaaac acgatgttag aaagcgtaca atgaactttt tgtttaaaca tgcgcttaaa
     1021 gactatttat gatctgggtt aaaaacttta taaatttaaa taatgatgaa attttagctg
     1081 ttttcaaagc tcgcacagat ccacgaacta ctgctttttg cataagaaac aattttaatt
     1141 ttgatgaaca cttgagtttt gtgcgttctt tgaaattcag aaacgacaaa gcgtatttta
     1201 tgatatacga tgatgagagt tttatcgcag taatatcgtt tgtagatata agcgctaatc
     1261 aagcagagtt tggattatac aaaactccag gtacgaaaag cgtagggaaa gttctaatga
     1321 atcagatgat aaaactagct tattctttaa atttaaaaac cataaaagct aaagttttga
     1381 agcataatct taaagcgata aatttatata aagagtttgg ttttgaaatt tactacgaag
     1441 ataaagagat attttatata aagcgcatta tagattaaaa taccaaaata tccccataaa
     1501 atggggataa aaggacttta gaaattctaa atgagttttg taagtttaat atgctcaaac
     1561 cctaaaatga acttacatac cactttagag ttatatttac gagactacaa atgcgctata
     1621 cttcaaataa attactcaaa taacttaaaa aagtttctca aaaaacgact tatattattg
     1681 taataattta agtacatttt gctgaacagc attagcttga ctcatagcgt aactaccgct
     1741 ttgagctaat atattatatt tagagaaatt cgcgctttct tcagcgaaat cgacatctct
     1801 gatttgactt tctgccgact taacatttac ttgagtaacg ctaatattat ttatcgtgct
     1861 aactagctga ttttgcacag aacccaggtc agatctaata gtatctagag tctttctagc
     1921 agcttcggct acatttatca tagcttgagc accagcgtaa gtattaacac cgccaactcc
     1981 tcttttatct attggagttt cacctgcttt gaaaaatccc atagcagcag caacggtagc
     2041 agagataaca ctatcattta tagtttttaa actaacacta gcttgattta cacgactatt
     2101 ttgaagccca gcagagatgc cagcagtagc agctccacct ccagcaacag acataaccat
     2161 tactatatct ctagcatctt gtctagtgaa tgatataaga cccataaaag ttacattagc
     2221 accgcctttt gcttgagtta tacctatcct agatatgcct gttccaccta tatggatagc
     2281 tctaccgtct tttgtagcaa gagttaattt accattttct ttactagctt ctactcctgt
     2341 ttgatctttt actttattta tagcggctat taaaacatta tctgcatctt tattttgaac
     2401 agatatatta cctatttgca caccatttat agttagatct tgcacactag cagattgaat
     2461 accaactcca tttataccgt taaaaacttg agtattatta acactagctt ttacgcctgt
     2521 tttatcggct acggcattta tctgatcagc tacggctgca agaccttgag aagcatatac
     2581 tccagagctt atagtttgga acttatagtc accaccaggc attccatcta taccttttaa
     2641 ggttatagtt acgcctcccg tatttgcact taatcccatt cccttagtat aaactacgtt
     2701 ttcacttgtt tcaaatctgg tatggcctat agtgtttgaa ctagttgcac ctatacttac
     2761 ttttgctgtc tcatttgagt aagcaccgat ttggaaattt ttgttgctaa aactaccgtt
     2821 tagtagttgt tgaccgttaa acgcagttgt gtttgctatg ttatctaact cttcaagaag
     2881 tctagttata tcgttttgaa gtgcacgtct tgagtcagag ttttgaccgt cttgagctgc
     2941 ttggatagct ttagttttga tagtatcaag aattttgatc tgctcatcca tagccttatc
     3001 tgctgtttga acgataccga tagcatcatt accatttttt atagattgac ctaatgcatt
     3061 agcttgactt cttagagaat cggcgatagt catacctgaa gcgtcatcag ccgcagtttg
     3121 aattcttaaa cctgaactaa gttttcctaa tgaacctgat aaatctctgt tgtttcctac
     3181 tgcattcgca tgggcattca tagcggcaat gttggtgtta attctaaaac tcatcttaaa
     3241 tccttttagt taaatatttt tagcatcctt gctaaaactt caataactat atcgcacttt
     3301 ggcttaaaaa gtttatat
//
LOCUS       DAPPKW010000140         3144 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.140, whole genome shotgun sequence.
ACCESSION   DAPPKW010000140 DAPPKW010000000
VERSION     DAPPKW010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3144
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.140"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            12..659
                     /gene="bamD"
                     /locus_tag="RPW04_001918"
     CDS             12..659
                     /gene="bamD"
                     /locus_tag="RPW04_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HDX6295993.1"
                     /translation="MKINLKSVIFAVSLLVFVGCSDKNDNELFNLTPDGWYSQIIEDI
                     KSNDLDSADKHYVSFASEHVASPLLEQMLLILAQAHVDEEQYILANFYLDEYIKRYGT
                     KQSIEFAQYLKIKANFDSFTKPNRNQKLMQDSIYEIEKFLNAYPNTQYRPLIETMLVK
                     FRLAKQYLDTQIYDLYERTDRGESAEIYKDKLESSPLNNVDSIKPKLPWYMRPFE"
     gene            668..3064
                     /gene="lon"
                     /locus_tag="RPW04_001919"
     CDS             668..3064
                     /gene="lon"
                     /locus_tag="RPW04_001919"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HDX6295994.1"
                     /translation="MQINSIRTFPANLPVIVEDELFLYPFMITPLFLNDEKNIKALDL
                     ALRDNTPILVVSSKPQNEGMREFDTCYSAGVIGSVMRRISLPDGRVKILFQGSQKGKI
                     IANISSDPLIALVDTIDIERPSNQKVDALLSVLREKVKSLSLLNHFFPPDLLKTIDES
                     IEATRVCDLISSALRLKKGVAYDFFIEENLENRVLKIIDYLIEEIEANKLQKEIKSKV
                     HSKIDKVNKEYFLKEQLKEIQKELGSDVGREEEISEYKNKLEAKKPYMGEDAYKEINK
                     QILKLSRMHPDGSEASMTGSYLDWALDVPFGNFSKKKLGVKDVANQLDSDHYGLQKPK
                     KRIVEYFGLRELLELRGLDSKTNNGVILCFAGPPGVGKTSLANSISKALKRELVRIAL
                     GGLEDVNELRGHRRTYIGAMPGRIVQGLIEAKTMNPVVVLDEIDKLARSYKGDPTAVL
                     LEVLDPEQNSKFRDYYLNFNVDLSKVIFIATANDIGLIPAPLRDRMEFISLNSYTPQE
                     KFQIAKKYLIPSELKKHGLKPSEISITKEALSLIIEEYTRESGVRNLRRKIADILRKV
                     ALEILENKIQKVSITPKNLKNFLDKKVFEIDSVDSTDQVGIVNGLAWTSVGGDVLKIE
                     VVRIKGKGSMQITGQLGDVMKESAQISFSLVKTLIDTNKIKVPKSMLAKDDKGKEMAV
                     YNSFDLHIHVPEGATPKDGPSAGITMSTAIASILSDTPIKSDVAMTGEITLSGKVLPI
                     GGLKEKLIAAYKAKIKTALIPRKNYDRDLEEIPSEVKENMQIIPVDTIEDVLKLSFSK
                     "
BASE COUNT         1175 a          449 c          619 g          901 t
ORIGIN      
        1 aaaggaaaca gatgaaaata aatttaaaaa gtgtcatctt tgcagttagc ttacttgttt
       61 ttgtcggctg cagcgataaa aatgacaatg aactttttaa tctaacgcca gatggctggt
      121 attctcagat tatcgaagat ataaaaagta acgatttaga tagcgccgat aaacattatg
      181 tctcatttgc tagcgaacac gtagcttcac cgcttttaga gcagatgcta cttatattag
      241 ctcaagctca cgtagatgaa gagcagtata ttttagcgaa tttctatctt gatgaatata
      301 taaaaagata tggaacaaag caatctatag aatttgctca gtatctaaag ataaaggcaa
      361 atttcgattc ttttacaaaa ccgaatagaa atcaaaaact tatgcaagat agtatttatg
      421 agatagaaaa atttctaaac gcatacccaa atacgcaata cagacctctt atagaaacta
      481 tgttggttaa atttaggtta gcaaaacagt atttagatac ccaaatttat gatctttatg
      541 aaagaacaga cagaggcgag tcggctgaaa tttataaaga taaattagaa agttcgcctt
      601 taaataacgt agattctata aaaccaaaac ttccttggta tatgagacct tttgagtagg
      661 agatttgatg cagataaata gtataagaac ttttccggca aatttaccgg ttatcgtgga
      721 agatgagctg tttttgtacc cttttatgat aacacctctt tttttaaatg atgagaaaaa
      781 cataaaagca cttgacttgg ctcttagaga taatactcct attttggttg tatcatcaaa
      841 accgcaaaat gagggtatga gagagtttga tacttgctat agcgctggag ttataggaag
      901 tgttatgaga aggatatctc ttcctgatgg tagagtaaaa atactttttc aaggctcaca
      961 aaaaggcaaa atcatagcca acataagctc tgatccgctt atagcgctag tagatactat
     1021 agatatagaa agaccttcta atcaaaaagt ggatgcactt ttgagcgtgt taagagaaaa
     1081 ggtaaaaagc ttaagcttat taaatcactt ttttcctcca gatctcttaa aaactataga
     1141 tgaaagtata gaagctacta gggtttgcga tcttatttca agtgctttaa gacttaaaaa
     1201 aggtgtagct tacgactttt ttatagaaga aaatttagaa aatagagtac ttaaaataat
     1261 tgattattta atagaggaga tagaggctaa taaactccaa aaagagataa aatcaaaagt
     1321 tcattctaaa atagataaag taaataaaga gtatttctta aaagagcagt taaaagagat
     1381 acaaaaagag cttggtagtg atgttgggcg tgaagaagag ataagtgagt ataaaaataa
     1441 attagaagcc aaaaaaccgt atatgggaga agatgcttat aaagagataa ataagcaaat
     1501 tctaaaacta tcacgtatgc atcctgatgg ctcagaagct agcatgacag gaagctactt
     1561 ggattgggct ttagatgtgc cttttggaaa tttctctaaa aaaaagctag gtgtaaaaga
     1621 tgtggctaat cagcttgata gcgatcatta cggactgcaa aagccaaaaa aacgcatagt
     1681 cgaatatttt gggctaagag aacttttgga acttagagga cttgattcta aaacaaataa
     1741 tggagttata ctatgttttg cgggacctcc tggagtaggt aaaacaagtc ttgcaaactc
     1801 tatttcaaaa gctttaaaaa gagagcttgt gcgaatagcc ttgggcgggc ttgaagacgt
     1861 aaatgagtta agaggtcata gaagaactta tataggagct atgccggggc gaatagtgca
     1921 aggattgata gaagctaaaa ccatgaatcc agtcgttgtt ttagatgaga tagataagct
     1981 tgcaagatca tataaaggag atccaaccgc tgttttatta gaagttttag atcccgagca
     2041 gaactctaaa tttagggatt attatctgaa ttttaatgta gatttaagta aggttatatt
     2101 tatagccacc gcaaatgata taggacttat accagctccg cttagagata ggatggagtt
     2161 tatatcgtta aatagctaca ctccgcaaga aaagtttcag atagcaaaaa aatatctcat
     2221 tccttcagag cttaaaaaac atggattaaa accatctgaa atcagtataa caaaagaagc
     2281 tttaagcttg ataatagaag aatatacaag agagagcgga gtaagaaatt taagaagaaa
     2341 aatagccgat atcttaagaa aagtcgctct tgagattttg gaaaataaga tacaaaaagt
     2401 atccataact cctaaaaatt taaaaaactt tttggataaa aaagtatttg agatagatag
     2461 cgtagacagc acggatcaag taggtatagt taacgggctt gcgtggacga gtgtcggtgg
     2521 agatgtacta aaaatcgaag ttgtacgcat aaaaggcaaa ggatctatgc agatcacggg
     2581 acagcttgga gatgtgatga aagagtctgc ccagatatct tttagcctag ttaagactct
     2641 tattgataca aataagataa aagttccaaa atctatgctt gcaaaagacg ataaaggcaa
     2701 agaaatggcg gtttataact catttgatct tcatatccac gttcctgagg gagccactcc
     2761 aaaagacggt cctagcgcag gtataactat gagtaccgcc atagcgtcta tacttagcga
     2821 tactcctata aaaagcgatg ttgctatgac aggagagatc actttgagtg gaaaagttct
     2881 tcctataggg ggattaaagg agaagctcat agcagcttat aaagctaaaa taaaaactgc
     2941 tttgattccg cgtaaaaatt atgatcgcga tcttgaggag ataccaagcg aggtcaaaga
     3001 aaatatgcag ataattcctg tagatacgat agaagatgtc ctaaagttat cgttttcaaa
     3061 gtaaattcat actcaatttt attttattat tatttttatt ttattaaatt taaacgcctt
     3121 taaaaggcgt ttaatattat atta
//
LOCUS       DAPPKW010000141         3141 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.141, whole genome shotgun sequence.
ACCESSION   DAPPKW010000141 DAPPKW010000000
VERSION     DAPPKW010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 3141)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3141)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3141
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.141"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..237
                     /locus_tag="RPW04_001920"
     CDS             <1..237
                     /locus_tag="RPW04_001920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295995.1"
                     /translation="RTNMAKLTAAEKLLKNEEQLKRLSEQRKQILNEIKEENEQKFKD
                     IGIKITDAIKTNEQFKLDFLNLVAEHKIAIEFLD"
     gene            379..771
                     /locus_tag="RPW04_001921"
     CDS             379..771
                     /locus_tag="RPW04_001921"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295996.1"
                     /translation="MPFFNQHLELKAEFDRNIDILGLSKFRSALDELSKKFYALYYTD
                     SLVHFLNIDSEALEFFDTNFSKLSKFIKEIKPIECEALSIDISSKNEMIISSSSSVTF
                     QNKESKFIFLRSSIYKSKIYKKTIILSL"
     gene            942..1817
                     /locus_tag="RPW04_001922"
     CDS             942..1817
                     /locus_tag="RPW04_001922"
                     /inference="COORDINATES: protein motif:HMM:NF025642.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PcfJ domain-containing protein"
                     /protein_id="HDX6295997.1"
                     /translation="MYIKSPFKFSSLENFINKKELFVKKYPKENFLNATNKSTLSASY
                     LVLKTKKHIPQSHYQEIINFILRTSPKISTNHQASLLVGKILKSYLCFKIQSDEKSKN
                     QIIYDYVNMALEQGENVNLKIKSFKRIKAEHDRLMLNIELERAPEVRLNKDNPFLRLK
                     LPSDIKMLTTKQEMVEEGVINHNCVASYIENVNANRCFICSLRRDNERYTIEIRRSKN
                     KFCLAQIKGFSNSEAPSEIIEYVNSAILANNKTVIYERERYKIATQLGLGVVEMKDGN
                     KAEKEIKDLCKEILK"
     gene            1895..2062
                     /locus_tag="RPW04_001923"
     CDS             1895..2062
                     /locus_tag="RPW04_001923"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295998.1"
                     /translation="MDKYASYDDAKKQELEKLDNELEALEEEIDEKLEFFKYLMTKYS
                     SIIKLTPKEQQ"
     gene            2059..2319
                     /locus_tag="RPW04_001924"
     CDS             2059..2319
                     /locus_tag="RPW04_001924"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6295999.1"
                     /translation="MNKELFIKEIDDDLEKMRQESRRFFTEVDMMNLLKLLARYHREQ
                     EGSNVINIANRLDLLVKDLQKFGEKNAYAYIANFIRNNWEKR"
     gene            2333..2725
                     /locus_tag="RPW04_001925"
     CDS             2333..2725
                     /locus_tag="RPW04_001925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296000.1"
                     /translation="MKLIDGYYVDTNNNKWNTSLYNETQAKKASKSLINCEGCENCRN
                     CINCKGCSHCTNCAKCMYCYKCIDCENCEACSCCIECVDCYKCMDCEICDTCRLCDDC
                     VDCYRCVECLRCESCDDYYDNIGVENER"
     gene            2715..3098
                     /locus_tag="RPW04_001926"
     CDS             2715..3098
                     /locus_tag="RPW04_001926"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296001.1"
                     /translation="MKDKGYKITEFDYKGNFLEWATWNLESFMKIVNEDLRSKGRNEF
                     IVFVDDDYIDNELSNFDEDWDIDDEEYKINKDILIRNLNEVRGCYADYLKNNGVYIRL
                     GTTFEEVVKSYCERINISANLEIID"
BASE COUNT         1285 a          389 c          567 g          900 t
ORIGIN      
        1 agaaccaata tggctaaact aaccgcagcg gaaaagctac tcaaaaatga ggagcaacta
       61 aaaaggcttt cagagcaacg aaagcagatt ttaaatgaga tcaaagaaga gaacgaacaa
      121 aagtttaaag acatcggtat aaaaataact gatgccataa aaacaaatga gcagttcaag
      181 cttgattttt taaatttagt tgccgagcat aaaatcgcaa ttgaattttt ggactaaaca
      241 gttgcttgga ctaggagtat aaattgaaag ttttatcaac aataataatt ggattgattt
      301 tagctggatg tggcaacgag gcacaataca ctcaagcaca taagatttat aaaatatgtt
      361 ttgaagggcg tgagttaaat gccatttttt aatcaacact tagaacttaa agccgaattt
      421 gatagaaata ttgatatttt aggattatct aaatttagat cagcccttga tgaattatca
      481 aagaaatttt acgctctata ctataccgat agtcttgttc attttttgaa tatagacagt
      541 gaagctttgg aattttttga tacaaatttt agcaaactaa gcaagtttat aaaagaaatc
      601 aagcctattg aatgcgaagc attaagcata gatatttcga gtaaaaacga aatgataata
      661 tcatcatcat ctagcgttac ttttcaaaac aaagagagta aatttatttt ccttagatca
      721 tctatttata aatcaaaaat ttacaaaaag acaattatac tatctttata ggcggtgagt
      781 ataaaggtaa attttgcttc tatgaagcaa ccttaaataa catctcaacg atatgctata
      841 aatctgcgac aatgcgtgaa ttttttaata tttacttttc ttatttatca aaattacatc
      901 taccattaaa agatataaaa ctagactttg aaagagaccc attgtatata aaatctcctt
      961 ttaaatttag ctcacttgaa aattttataa ataaaaaaga gctttttgtt aaaaaatatc
     1021 caaaagagaa ttttctaaat gctaccaata aaagcacttt atctgcttca tatttggtac
     1081 taaaaacaaa gaaacatatt ccgcaatcac actatcaaga gatcataaat tttattctgc
     1141 gaactagtcc taaaatatca accaatcatc aagcttcact tttagtaggc aaaattttaa
     1201 aaagctatct atgctttaaa atacaatcag atgaaaaaag caagaaccaa ataatttacg
     1261 attatgtcaa tatggcttta gagcaaggag aaaatgtaaa tttaaaaatc aaatcattta
     1321 aaagaataaa agccgaacac gatagattaa tgttaaatat agagttagaa cgtgcgcctg
     1381 aagtaagatt aaacaaagac aatccttttt tacgtctaaa acttccaagc gatataaaaa
     1441 tgctaacaac caagcaagag atggttgaag aaggagtgat taatcacaat tgtgtagctt
     1501 catatataga aaacgtaaat gctaacagat gttttatttg ttctctaaga agagacaatg
     1561 agagatacac gattgagatt aggcgatcaa aaaacaaatt ttgcttggca cagattaagg
     1621 gcttttcaaa cagtgaagca ccaagcgaga taatagagta tgtaaatagt gcaatattag
     1681 cgaataataa aactgtaatc tacgagcgag aacgctacaa aatagcaacc cagcttgggc
     1741 ttggagtggt cgaaatgaag gacggcaaca aagcggaaaa agaaattaaa gatttatgca
     1801 aggaaatttt aaaatgaatt attttaaatt tctcttagca atgaattgca gagcctccgt
     1861 cgcgaggatt tagtgaaatt gaaaaggagc aaaaatggat aaatacgcat catatgatga
     1921 tgccaaaaag caagagctag aaaagcttga taatgagctt gaagccttag aagaagagat
     1981 agatgaaaaa ttagagtttt ttaaatattt gatgactaaa tatagctcaa taataaaatt
     2041 gacaccaaag gagcaacaat gaataaagag ctatttataa aagaaattga tgatgatttg
     2101 gaaaaaatga gacaagagag taggcgattt tttaccgaag ttgatatgat gaatttatta
     2161 aaattattag caaggtatca tagggagcaa gaaggctcta atgtaataaa tatagcaaat
     2221 agactagatt tattagttaa ggatttgcag aaatttggcg agaaaaatgc ctatgcgtat
     2281 atagcaaatt tcatcagaaa taactgggag aaaagatgag aaaggagtaa caatgaaatt
     2341 aattgacggc tattatgttg atactaacaa caacaagtgg aatacctcat tatacaatga
     2401 aactcaagcc aaaaaagcct caaaatcttt aataaattgt gagggttgtg aaaattgtag
     2461 gaattgtata aattgtaaag gttgctcaca ctgcactaat tgtgctaaat gtatgtattg
     2521 ttataaatgt atagactgcg aaaattgtga agcgtgttcg tgttgcatcg agtgtgtaga
     2581 ttgctacaaa tgtatggact gcgaaatttg tgacacgtgt aggctttgcg acgactgcgt
     2641 agattgttac agatgcgtag aatgccttag atgtgaaagt tgcgatgatt attacgacaa
     2701 tataggagta gaaaatgaaa gataaaggat acaagataac agagttcgat tacaaaggga
     2761 attttttaga atgggcaact tggaacttag aaagctttat gaagatagta aatgaagatt
     2821 tgagaagtaa aggtcgaaac gaatttatag tttttgttga tgatgattat attgataatg
     2881 aattatcaaa cttcgatgag gattgggata tagacgatga agaatataag ataaataaag
     2941 atattttgat aagaaattta aatgaagtca gaggttgcta tgcagattac ttaaaaaaca
     3001 acggagtata tataaggcta ggaactactt tcgaagaagt agtaaaaagc tattgtgaaa
     3061 gaataaatat atctgctaac cttgaaataa tagattaaat aaaagaaaaa aaggagaaaa
     3121 atgaaaaatg aatcataaaa a
//
LOCUS       DAPPKW010000142         2922 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.142, whole genome shotgun sequence.
ACCESSION   DAPPKW010000142 DAPPKW010000000
VERSION     DAPPKW010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2922)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2922)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2922
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.142"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            106..2679
                     /locus_tag="RPW04_001927"
     CDS             106..2679
                     /locus_tag="RPW04_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDX6296002.1"
                     /translation="MANIFEELTDQTRSLVENSLSLAIGNKNPEALSLHMLWALVADS
                     NSILNQIFNKTNVSKDAVLLDIKSRASKLLTSSNVSRENIKVSSELVNSLENAKAVMI
                     SLGDSYIAVDTWILGNLDKEPLKEILSKYINLIELKKELEAIRGGRNVDSQTSDETLD
                     SLSKFGVDLTKKASEGELDPVIGRDEEITRMMQILIRKTKNNPILLGEPGVGKTAIVE
                     GLAQLIIKKAVPTSLANKRVIALDMSALIAGAKYRGEFEDRLKAVIDEVKKARNIILF
                     IDEIHTIVGAGASEGSMDAANILKPALARGELHAVGATTLKEYRKYFEKDAALQRRFQ
                     PVNVAEPSVNEALQILRGIKDKLEVHHNVNITDSALVAAAKLSDRYISGRFLPDKAID
                     LIDEAAAELKMQIESEPYELSKAKREIETLIVEKEALKMENSDKNSERLNEIEKEVAN
                     LNEKKSGLEAKFKNEKAVFNGISEAKKQIESLKNEAELAKRNNAYEKAAEIEYGKIPE
                     ASAKIKELEAKWEEMKKGGVLLKNEVDEDMVAGILSKWTGISVKRMLTSEKEKFLQVE
                     EHLKRNVVGQDAALHALSRAIKRNKAGLSSQNRPIGSFLFLGPTGVGKTESAKALARF
                     LFDDEKALVRFDMSEYMEKHSVSRLLGAPPGYVGYDEGGQLTEAVRRKPYSVILFDEV
                     EKAHKDVFNVLLGILDDGRATDNKGVTVDFKNTIIILTSNIGSSAIANLSGDERENAV
                     KDALKDYFKPEFLNRLDDTIIFNPLGANELSGIVSIMFKELEATLQNRGIKAVLDENA
                     KEFIAKAGFDPVYGARPLRRALYELVEDKLAEMILRDELKSGDSIKISALNDEIVVNL
                     I"
BASE COUNT         1047 a          458 c          628 g          789 t
ORIGIN      
        1 tttagcctat gaaaataata tgaattttaa aaattatttt atgaaccttg acaaagatag
       61 actaaagttg tataatgctc ctcatataaa gtttaaggag caaaaatggc aaatatattt
      121 gaagaattaa ccgatcaaac tagaagtttg gttgaaaatt cactgagcct tgctataggc
      181 aataaaaacc cagaagcctt gagcttgcac atgctttggg cattagtcgc agatagtaac
      241 tctatactaa atcaaatttt taataaaaca aacgtaagca aggacgcggt tttgcttgac
      301 ataaaaagtc gcgcttctaa actccttact agctcaaacg ttagtagaga aaatatcaaa
      361 gtttcaagcg aactcgtaaa tagcttagaa aatgcaaaag ccgttatgat aagcttagga
      421 gatagttata tcgctgttga tacttggatt ttaggtaacc ttgataaaga gcctttgaaa
      481 gaaattttaa gtaaatacat aaatttaata gagcttaaaa aagagctaga agccattcgc
      541 ggtggtcgca atgtagatag tcaaactagc gatgaaactc ttgatagcct ttctaaattt
      601 ggagtggatc ttactaaaaa agcaagcgaa ggagagcttg atcctgttat cggaagagat
      661 gaagagataa ctaggatgat gcaaattctc atacgtaaaa ctaaaaataa ccctatcttg
      721 ctaggtgagc caggagtagg aaaaactgct atagtagaag gtttggctca gcttatcatc
      781 aaaaaagctg ttcctactag tcttgcaaac aaacgcgtca tcgctcttga tatgagtgcc
      841 ctcatcgccg gagcaaaata ccgtggtgag tttgaagacc gtctcaaagc agtcatcgac
      901 gaagtaaaaa aagcaaggaa tatcatactt tttatagacg aaattcacac tatcgtagga
      961 gctggagcta gtgagggcag tatggacgcc gcaaatatcc taaaaccggc tcttgctaga
     1021 ggcgagcttc acgccgtggg agctactact cttaaagagt atcgtaagta ttttgaaaaa
     1081 gacgcagccc ttcagcgtcg tttccagcca gtaaatgttg ccgagccgag cgtaaatgaa
     1141 gctttgcaaa ttttacgtgg tatcaaagac aagctagaag ttcatcataa cgtaaatatc
     1201 acagatagcg ctcttgtggc tgctgcaaag ctaagcgata gatatataag cggtagattt
     1261 ttaccggata aagctataga cttgatcgat gaagccgcag ccgagcttaa aatgcagatc
     1321 gaaagcgaac cttatgagct ttcaaaggct aaaagagaga tcgaaactct aatagtcgaa
     1381 aaagaagctt taaaaatgga aaatagtgat aaaaatagcg aacgtcttaa tgagatagaa
     1441 aaagaggttg caaatttaaa tgagaaaaaa tccggactag aagctaaatt taaaaatgaa
     1501 aaagcggtat ttaacggtat aagcgaagcc aaaaaacaga tagaaagtct taaaaatgaa
     1561 gccgaacttg caaaaagaaa taacgcttat gaaaaagccg cagagataga gtacggtaag
     1621 atcccagaag caagcgctaa gataaaagag ttagaagcta aatgggaaga gatgaaaaaa
     1681 ggcggggttt tgcttaaaaa cgaagttgat gaggatatgg tagcgggtat tcttagtaaa
     1741 tggactggaa tttcagtaaa acgtatgcta actagcgaaa aagagaaatt cttgcaagta
     1801 gaagagcatc taaagcgtaa cgtagtagga caagacgctg cgcttcacgc tctttcacgc
     1861 gccataaaac gaaacaaagc agggctcagc agtcaaaata gaccgatcgg tagctttttg
     1921 tttttaggac cgactggagt tggtaaaaca gagagcgcaa aggcgttagc tagattttta
     1981 tttgatgatg aaaaggctct tgttcgtttt gatatgagtg aatatatgga aaaacacagc
     2041 gtttcaaggc tgcttggagc gcctcctgga tacgttgggt atgatgaggg cggacaatta
     2101 accgaagcag ttcgtagaaa accttatagc gtgatacttt ttgatgaagt tgaaaaggct
     2161 cataaagacg tgtttaatgt actgcttggg attttagatg atggaagggc gacagataac
     2221 aaaggcgtta ccgtggattt taaaaatact atcatcattt tgactagcaa tatcggttcg
     2281 tctgcgatag caaatttaag tggagatgag agagaaaatg cggtaaaaga cgcgttaaaa
     2341 gactatttta aacctgagtt tttaaataga ctagatgata cgatcatctt taatcctctt
     2401 ggtgcaaacg agcttagcgg catagtttct ataatgttta aagaactaga ggccactctt
     2461 caaaacagag gcattaaagc agttcttgat gaaaatgcta aagagtttat cgctaaagcg
     2521 ggatttgatc cggtgtatgg tgcgcgtccg cttagaaggg ctctttatga gttagtcgaa
     2581 gataaacttg ctgaaatgat actacgcgat gagttaaaaa gcggcgacag tataaaaata
     2641 tctgcactta atgatgaaat agtcgtaaat cttatataaa atatttggag cggagttttt
     2701 acttcgctcc aaattcaccc ttaaaatata attaaaaatt atttttattt ataatgattt
     2761 atttttaact ataattaact aaatttaaag tataaaattt gtataatctg caaatttaat
     2821 tacggaaaac aaattttgtc taaatttgaa atattcaaat ctactatccc agttatgatg
     2881 ggatatatcc cgcttggttt agccttcgga ctttatggag tt
//
LOCUS       DAPPKW010000143         2900 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.143, whole genome shotgun sequence.
ACCESSION   DAPPKW010000143 DAPPKW010000000
VERSION     DAPPKW010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2900)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2900)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2900
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.143"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..566
                     /locus_tag="RPW04_001928"
     CDS             <1..566
                     /locus_tag="RPW04_001928"
                     /inference="COORDINATES: protein motif:HMM:NF012936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="asparagine synthetase B"
                     /protein_id="HDX6296003.1"
                     /translation="KDSFKTNKFMELYALEFRHFKNDEAKLLGISNEPNLSEFELENE
                     YESMSFSDISTYLSDDIFVKTDRAAMSVSLEVREPLLSYKFVDFMIKADPNLRKNKAL
                     FKAYLLKHLPKELVMRPKMGFALPIEEWFHTDLGYLLDEYLTNQDFFDKQYILNLVQD
                     FRDKKRVNFAKIWHILLFLMWKKRWNI"
     gene            563..1669
                     /locus_tag="RPW04_001929"
     CDS             563..1669
                     /locus_tag="RPW04_001929"
                     /inference="COORDINATES: protein motif:HMM:NF012744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDX6296004.1"
                     /translation="MIKNGKKVLFVIDLIKGGGGAQKVLKIAMQTLKKNGFETELIVL
                     KRSNEELDFSEFRVHYVLNEDDKLLPNSFIILEKLRNLMREFDIVCTFIDFITTYYAA
                     LAIELNCFCVSKNANAKQALESRELVTHKTDQKLICFVRSKLSFLSQSFALKELNLDL
                     AKLSLSRADKVVANSIECQKELLEFGIKNPLLLNNPIILPKHIENNLNLNKNYALAVG
                     RLSKEKDYETMIKAFKKANCKDLKLIILGEGDLKNSLLELAKGANIEFLGYKKNVITY
                     LANAKFFIQTSLFEGSSNSVLESYALGVPAILSDIPQNREIYNLDACYVPCKDITSLS
                     NSIRKLNENSTKFNPNLTKFSIENFEKTLLGIFK"
     gene            1666..>2900
                     /locus_tag="RPW04_001930"
     CDS             1666..>2900
                     /locus_tag="RPW04_001930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296005.1"
                     /translation="MIYIYPNGYYTKKLISMLKEFEFEFTAIDDSDPKTSLISMQKNI
                     KDNLLLICNGEIYDILEKNVKKCGITNYENAFLYFAKFIANNLKNTKLEFIEEQNIIK
                     LKPNPVITLFDEFYITYSMFLNNQILTILHTSFDSKFKSFKSPLPKRKLSINLCFSKK
                     NKHLGNIDNKFIDILYIFNSQKDYETNKDSIKNGLIVPSVLTELVSNSDFILTLNYPS
                     FRTYKSTVAFLPHSFHPFLVATRFFRSNDSYKQYIQNVYFRDLDYIFISSNLENEILK
                     DNLNDSFDQLQKVVKAGYPSLDFNIANKKTSKNADIVLFAYSFLDDLLNHSDLEWILN
                     DLKKRNLKVALRYHAYYKNHNMMQKLNKLKLKFNLLIDDMTNYDILNKTKVLVSDLSS
                     ISHTFSLTYLRKSVIFAPF"
BASE COUNT         1152 a          404 c          420 g          924 t
ORIGIN      
        1 ttaaagatag ttttaaaacc aataaattca tggaattata tgctcttgaa tttagacatt
       61 ttaaaaatga cgaagcaaaa cttttaggaa tttcaaatga acccaaccta agtgagtttg
      121 aactagaaaa tgaatatgaa agtatgagtt ttagtgatat ttcaacatat ttaagtgatg
      181 atatttttgt taaaaccgat cgcgcggcaa tgagcgtgag cttagaagtg agagagccgc
      241 ttttgagcta taaatttgtg gattttatga taaaagcaga tcctaattta cgtaaaaata
      301 aagctttatt taaagcatat cttttaaaac atcttccaaa agagcttgta atgagaccaa
      361 aaatgggatt tgctcttcct attgaagagt ggtttcatac tgatttggga tatcttttag
      421 atgaatattt aacaaatcaa gatttttttg ataagcaata tattttaaat ttagttcaag
      481 attttagaga taaaaagaga gtaaattttg ctaaaatttg gcatatttta ctatttttga
      541 tgtggaaaaa aaggtggaac atatgataaa aaacggcaaa aaagtgctat ttgtaatcga
      601 ccttataaaa ggtggaggcg gcgctcaaaa agtactaaaa atcgctatgc aaacacttaa
      661 aaaaaatgga tttgaaactg aactaatagt actcaaacga tcaaatgaag agcttgattt
      721 tagcgagttt agagtgcatt acgtattaaa tgaagatgat aaactacttc cgaactcatt
      781 tattatatta gaaaaattaa gaaatttgat gcgtgaattt gatatagttt gtacatttat
      841 agattttatc acaacttatt atgctgcatt ggctattgaa ctaaactgtt tttgcgttag
      901 caaaaacgca aatgcgaagc aagctcttga gtcaagagag cttgttacgc acaaaacaga
      961 ccaaaaactg atctgttttg tgcgaagcaa gctctctttc ctatctcaaa gctttgcttt
     1021 gaaagagcta aatttagact tagctaaact cagcctttct agagcagata aagtagtagc
     1081 aaacagtatc gaatgtcaaa aagaactact tgaatttggg ataaaaaacc cattattact
     1141 caataatcct ataatattac caaaacatat agaaaacaat ctaaatttaa ataaaaatta
     1201 cgctttagca gtaggaagat taagcaaaga aaaagactac gaaactatga taaaagcatt
     1261 taaaaaagca aactgtaaag acctaaaatt gataattctt ggagaaggcg atctgaaaaa
     1321 ttctctatta gaactagcca aaggagcgaa tatagaattt ttaggataca aaaaaaacgt
     1381 aataacatat cttgcaaatg caaaattttt cattcaaaca agtctatttg aaggctcatc
     1441 aaactccgtt ttagaaagct acgcgcttgg tgttccagct attcttagcg atatcccgca
     1501 aaatagagaa atttacaatt tagatgcctg ctatgtgccg tgtaaagata taacatctct
     1561 tagcaactct ataagaaaat taaatgaaaa ctctactaaa tttaatccta atttaactaa
     1621 atttagtata gaaaactttg aaaaaacact gctaggaata tttaaatgat ctatatatat
     1681 cccaacggtt actacactaa aaaattaatt tcaatgctga aagaatttga gtttgagttt
     1741 acagctattg atgatagcga tccaaaaact agcttaatat ctatgcaaaa aaatataaaa
     1801 gataatcttt tattaatttg caatggtgaa atatatgata ttttagaaaa aaatgtaaaa
     1861 aaatgtggta taacaaacta cgaaaacgct tttttgtatt ttgccaaatt tatagcaaat
     1921 aatcttaaaa atacgaagct tgagtttata gaagagcaaa acattatcaa actcaagcca
     1981 aatcctgtta taacgctatt tgacgagttt tacataactt actcaatgtt tttaaataat
     2041 caaatattga cgattttaca tacaagtttt gactccaaat ttaaatcttt caaatctcct
     2101 ttaccaaaaa gaaaactaag tataaattta tgctttagca aaaaaaacaa gcatctagga
     2161 aatattgata ataaattcat agatatttta tatattttta actcgcaaaa agattacgaa
     2221 acaaataaag actccataaa aaacggtcta atagtgccta gcgtacttac tgaactagta
     2281 tcaaatagcg actttatact tactctcaac taccctagtt ttcgcactta taaaagtact
     2341 gtagcatttt taccacactc ttttcaccca tttttagtag caactagatt tttcagaagt
     2401 aacgatagct ataaacagta tatacaaaac gtatatttta gagatttgga ttatatattt
     2461 attagctcaa atttggaaaa tgagatttta aaagataatt taaatgatag ttttgaccaa
     2521 ttacaaaaag tagtaaaagc cggatatcct agtcttgatt ttaatattgc aaataaaaaa
     2581 acaagcaaaa atgcagatat agttctattc gcttatagtt ttttagatga tttattaaat
     2641 catagcgacc tggaatggat tttaaatgat ctcaaaaagc gaaatttaaa agttgcgctc
     2701 cgatatcacg catactataa aaatcataat atgatgcaaa agctgaataa attaaaatta
     2761 aaatttaatc tgttaataga cgatatgaca aattacgata ttctaaacaa aacaaaagtt
     2821 ttagtaagcg atctatctag catatctcac actttttctc taacatatct tagaaaaagt
     2881 gttatttttg ctccatttga
//
LOCUS       DAPPKW010000144         2752 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.144, whole genome shotgun sequence.
ACCESSION   DAPPKW010000144 DAPPKW010000000
VERSION     DAPPKW010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2752)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2752)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2752
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.144"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            295..1197
                     /locus_tag="RPW04_001931"
     CDS             295..1197
                     /locus_tag="RPW04_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296006.1"
                     /translation="MGLSNILIPTNSLKYYKFKIVLSSVNLSYQNVCFTHKNSFAMVF
                     SHHLTMLRSFIFTHKICDISKQESIDTFGSAVDCYYVAMMKSDHKYFNALNSKAKLLN
                     LGYPSIDEQIKSYIPNNPQKCVLVLFRHSKAYEKIIEVMDKLLNLGYEVIFRPVPTFE
                     NNSDNLEIKNHFLGRKNFTYDTDPKISNQTLQKSMCAIGDYSSTIFSFPFTTLRPCLL
                     FYPTDIMGDKFEIETINGKTLSLADKNLHIVSRTADELIQNIENLNLDEWKERILNYR
                     NSEIYNLGHSSEAIAQFILDKIKP"
     gene            1224..1736
                     /locus_tag="RPW04_001932"
     CDS             1224..1736
                     /locus_tag="RPW04_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HDX6296007.1"
                     /translation="MIIWIMGLAGSGKTTLAKELRNRLQNSIYIDGDEFREVFGSVNY
                     DKDSRIKIAMQKARLANALSKQGFTVICTAISMFEQNYNFNRRLDEKYIEIYLKCEFE
                     ELVKRDQKGLYTGALSKQIKNVVGVDIKYDEPNADITLDSSDFSNLQANLDKILTLLK
                     RQKSEKLQNN"
     gene            1759..2520
                     /locus_tag="RPW04_001933"
     CDS             1759..2520
                     /locus_tag="RPW04_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011116266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HDX6296008.1"
                     /translation="MKQGDFSEVAKFYHNRPAYNYELIKNILKCANFKDDFCIAEVGA
                     GTGKLTAILKELAPKAKIVAVEPNDEMRDIGQKTVENVTWIKGSGEDTKLQNDSADIL
                     FMASSFHWTDPTLSLPEFKRVLKKDGYFCALWNPREIEKGTVFDEIECEIKNILPNLN
                     RVSSGTQNSKNWIEVIQSTKDFKDCMYMAMPYIENMSKERYIGAWQSVNDIQAQAGGG
                     SKWNEILKMIEDKISGLDELKVKYTIKAYLAKSTK"
     gene            2646..>2752
                     /locus_tag="RPW04_001934"
     CDS             2646..>2752
                     /locus_tag="RPW04_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDX6296009.1"
                     /translation="MQKDLIEQNWDYTKHAEFYSYRPNYAKQAIDILAF"
BASE COUNT         1088 a          414 c          488 g          762 t
ORIGIN      
        1 agccctgttc ttttggcttg cgatagttgc tcacataaga ctagagccgt tagaaaaaaa
       61 ctcatttcaa atttagaaaa tctaaatata aaatgggctg acggatttga gtttatagca
      121 gatgaacttt taaaatttga aaatataaac ttagaaaata gcgtggcgat ccttactaca
      181 gcgctattta aaaatagaca ctacggcagt atttttgata ttttgttaaa aaataaagta
      241 aatatcttca tagtaaatag ctacatacaa aattataaaa acgacaaagg atttatgggg
      301 ctttcaaaca ttttgatacc gaccaactct ctaaaatact ataaatttaa aatcgttctt
      361 tcaagcgtaa atctaagcta tcaaaacgta tgttttactc ataaaaactc atttgcaatg
      421 gtattttcgc atcatcttac catgcttaga agttttattt tcacgcataa aatttgcgat
      481 atctcaaaac aagagagtat agatactttt ggcagtgcag tggattgcta ctacgtggcg
      541 atgatgaaaa gcgatcacaa atactttaat gccctaaata gcaaagctaa acttttaaac
      601 ttaggctatc cgagtattga tgaacagata aaatcataca ttccgaataa tcctcaaaag
      661 tgtgttttgg tgctatttag acattctaaa gcgtacgaaa aaatcattga agttatggac
      721 aaacttttaa atttaggata tgaagttata tttcgccctg tcccgacctt tgaaaacaat
      781 agcgacaatt tagaaataaa aaaccacttt ttaggtcgca aaaactttac ctacgatacc
      841 gatccaaaaa tatccaacca aactctacaa aaatctatgt gcgctatagg ggactattca
      901 tcaaccatat ttagttttcc gtttaccacg cttagacctt gtttgttatt ttatccaaca
      961 gatataatgg gagataaatt tgaaatagaa accataaatg gtaaaacact gagtttggca
     1021 gataaaaact tgcatatagt atctagaacc gcagatgaac tgatacaaaa catagaaaat
     1081 ctaaatttag atgaatggaa ggagcgtatt ttaaactaca gaaatagtga aatttacaac
     1141 cttgggcact caagtgaagc tattgctcag tttatacttg ataaaataaa accataaaat
     1201 agtataaaaa caaaggagaa ccggtgatta tctggataat gggattagca ggcagcggaa
     1261 aaacgacttt ggcaaaagag ttgcgtaatc gactgcaaaa ctccatttat atagacggtg
     1321 acgaatttag agaggtattt ggaagcgtta attatgataa agattctcgt atcaaaatcg
     1381 caatgcaaaa agcaagactc gcaaatgcgc tatcaaaaca aggatttacg gtaatctgca
     1441 ctgctatttc tatgtttgag caaaattata atttcaaccg acgcttagat gaaaaatata
     1501 tcgaaattta tttaaaatgt gaatttgagg aactagtaaa acgcgatcaa aaagggcttt
     1561 ataccggtgc gcttagcaaa cagataaaaa acgtagtcgg cgtagatatc aagtatgatg
     1621 agccaaatgc cgatattacg ctggacagtt cagatttttc aaatttgcag gcgaatttag
     1681 ataaaatatt aactttacta aaacgtcaaa aaagtgaaaa attacaaaat aattaaccgt
     1741 taaattaaag gattagtatt gaaacaagga gattttagcg aagtagcaaa gttctatcac
     1801 aatagaccgg cttacaacta tgaacttatc aaaaatatat taaaatgtgc gaatttcaaa
     1861 gatgattttt gtatcgcaga agtaggagcc ggaacaggaa aattaactgc tattttaaaa
     1921 gagttagcgc caaaagcaaa aatagtcgca gtagagccaa acgatgagat gagagatata
     1981 ggacaaaaaa ccgtagaaaa cgtaacttgg ataaaaggaa gcggtgaaga tacaaagcta
     2041 caaaacgata gcgcagatat actatttatg gctagcagtt ttcactggac cgaccctact
     2101 cttagtcttc ctgagtttaa acgcgtactt aaaaaagatg gatatttttg tgcgctatgg
     2161 aatcctagag agatagaaaa aggaaccgtt tttgatgaga tagagtgcga gataaaaaat
     2221 atactaccaa atctaaatcg tgttagctca ggcactcaaa acagtaaaaa ttggatagaa
     2281 gttatacaaa gcacaaaaga tttcaaagat tgtatgtaca tggcgatgcc ttatatagaa
     2341 aatatgagta aagaacgcta tataggagct tggcaaagtg taaatgatat acaagcgcaa
     2401 gctggggggg ggtctaagtg gaatgagata ttaaaaatga tagaagataa aatctcaggc
     2461 ttagatgaat taaaagtaaa atacactatc aaagcctatc tagcaaaaag tactaaatag
     2521 cggaattaat gaaaatttag gcaaatttgc ccttggtatt atgttccgca tatatcaaaa
     2581 cagtctgctt tggacgagtt taaaatatag tttaaagcaa ataaaaataa aaaaaaggaa
     2641 aaaatatgca aaaagatcta atagaacaaa attgggatta tacaaaacac gcagaattct
     2701 actcatatag accaaattac gcaaaacaag caattgatat tttagcattt ta
//
LOCUS       DAPPKW010000145         2723 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.145, whole genome shotgun sequence.
ACCESSION   DAPPKW010000145 DAPPKW010000000
VERSION     DAPPKW010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2723)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2723)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.145"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..2708
                     /locus_tag="RPW04_001935"
     CDS             <1..2708
                     /locus_tag="RPW04_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HDX6296010.1"
                     /translation="TAAESTLNPGDKIDGGAGNDVLKVDLKNNFKGLKDDGYIKNIEK
                     LSLTNSSVSNRTFDAKGIDGLQTVALSGEKGISVTNLANIVDVELTNLKADKFNVDSI
                     YADKVLDGSADVQNLKVNGVGAKGASVAITADKIETLNLNTTGSQSFVSADVASISVK
                     GNANLSLATGAKTTTLDASSFGGALDADLSTSASVTSIKGGNGNDKITIKDVAVNVAI
                     DGGAGNDELVIKGSTATTLQPTLTNIEKVTIDGNTKDLTLSLKKAQSVTELSFKNIVE
                     TVTESNGNVETVNILANNATDKAVTINDESLKTINFSDVDDKGASVAAKGKIVADKAT
                     ELTINSNKVTAAADAVVQAANATKIDINAAKDTVGLTLGGVAKLTDLTVNNKGAFALT
                     GSAATDLDSVKNLSVNTEGAFSIATATSLKNLNNLSLNGVSADLSTTVTSIGSSTLSS
                     LEINSNLSGDLKLAATIAAKGDIDINIENGANITAGSTSITSSTGNASVIISSATGNV
                     TLGAVSATQGNLTLNAGNTLGNITIGALKGDIVSVDLGGVLGTINTGNKVSITSNEVT
                     YVGSEISKNVVEITAAAGGTDLNAQVIGGAAADDALTIKGIADTQTITASGDLSGGTL
                     TLTLTDATKLSSLDISGVKGITGNVAIELGKAVQGNKTDVSVQGSDAAEQITYTSAAS
                     LTDIKISGDLGAGANTITVTPDTAAADLKTIDLSGLSATGGTLASTITLVAANTAITT
                     IKGSAGNDTITIGKLNDGLTVTGGAGNDVFNVTAAKTTVGGGEHTTITDFSAGDSIVF
                     NATAANVAAYANVGTVQGANIAAAIAAALAITVGDITSADKEKSVYGFTWSNNGTTET
                     YLYYNSTNGETTTVATDILVKLSGNVDLDSISLNADTVTGDITIA"
BASE COUNT          971 a          436 c          577 g          739 t
ORIGIN      
        1 gtactgctgc tgagagtact ttaaatcctg gggataagat agatggtggt gctggtaatg
       61 atgtgcttaa ggtagatttg aagaataact tcaaaggcct aaaagatgac ggctacatca
      121 aaaatataga aaaactatct ttaactaata gtagtgtttc aaacagaaca ttcgacgcta
      181 aaggtataga tggattgcaa acagttgcgt taagtggcga aaaaggaatt agcgttacta
      241 atcttgctaa tatagtagat gttgagctta ctaacctaaa agctgataaa ttcaatgtag
      301 attctatata tgcggataaa gtgcttgatg gttcagctga tgtgcaaaat ttaaaagtaa
      361 atggtgttgg tgctaaaggt gctagcgtag caataactgc cgataagata gaaactctaa
      421 atttaaatac tacaggaagc caaagctttg taagtgctga tgtggcaagt atatctgtaa
      481 aaggaaacgc aaatctatct ttagcaacag gagcaaaaac tactacttta gatgcttcta
      541 gcttcggtgg agctttggat gcagatttaa gcacatcagc tagtgttact agtattaaag
      601 gtggaaatgg taatgataag ataactataa aagatgttgc agtaaacgta gcaattgatg
      661 gtggcgctgg aaatgacgag ctagttatca aaggaagtac tgctacaaca cttcaaccga
      721 ctttaacaaa tatagaaaaa gttactatag acggtaatac taaagattta actctatcat
      781 tgaaaaaagc tcagagcgta acagagttaa gctttaaaaa tatagttgaa actgttactg
      841 agtcaaacgg aaacgtagag acagttaata tcttggcaaa taatgctact gataaagcag
      901 taactatcaa tgacgagagt ttaaaaacaa ttaacttttc agatgttgat gataagggag
      961 ctagcgtagc agcaaaaggt aaaatagtag ccgataaagc aaccgagctt acaattaact
     1021 caaataaagt aacagctgct gctgatgccg tagttcaagc cgcaaatgct acaaaaatag
     1081 atataaatgc agctaaagat actgttggtt taactcttgg cggtgtagct aaattaactg
     1141 atttaaccgt aaataataaa ggtgcgtttg cattaacagg ctcagctgct acagatcttg
     1201 attcggtaaa aaatcttagc gtaaataccg aaggagcatt tagcatagct actgctacaa
     1261 gcttgaaaaa cttaaataac ttaagcttaa acggagtttc tgctgattta tctactacag
     1321 ttacaagtat aggtagttca acactttctt ctttagaaat aaattctaat ttaagcggag
     1381 atcttaaatt agctgcaact atagccgcaa aaggcgatat cgatatcaat atagaaaacg
     1441 gagctaatat tacagcagga agtactagca taacttcatc aacaggaaat gctagtgtga
     1501 tcatctcttc agctactgga aacgttactt taggagccgt atcagcaact caaggtaatc
     1561 taactctaaa tgcaggaaat actctaggaa acattactat aggagctctt aaaggtgata
     1621 tagtaagcgt agatctaggt ggtgttttag ggactataaa tactggtaat aaagtatcaa
     1681 ttacttcaaa cgaagttact tatgtaggtt cagagatcag taaaaacgta gtagagataa
     1741 ctgccgcagc cggcggtact gatttaaatg ctcaagtaat aggtggagcc gctgcagatg
     1801 atgcattaac aataaaaggt atagcagata ctcaaactat aaccgctagc ggagatttaa
     1861 gtggtggaac tttaactctt actttaacgg atgctactaa actaagtagt ttggatataa
     1921 gcggggttaa gggtataaca ggtaatgttg caatcgaact aggtaaagca gtacaaggta
     1981 ataaaacaga tgtaagcgta caaggtagcg acgctgctga acagataaca tatacttcag
     2041 ctgcgagtct tacagatata aaaatatctg gcgatctagg agcaggagct aacactataa
     2101 ccgttactcc agacactgct gctgcagatt taaaaactat agatctaagc ggattaagtg
     2161 ctactggcgg aactcttgct agtacgatta ctcttgttgc tgcaaatacg gctattacaa
     2221 caatcaaagg tagtgccgga aatgacacta taactatcgg taaattaaat gacggtttaa
     2281 ccgtaacagg tggagcagga aatgacgtat ttaacgttac tgctgctaaa acaactgttg
     2341 gtggtggcga acatactact atcactgact ttagtgccgg ggatagcatc gtatttaatg
     2401 ctacagctgc aaatgttgct gcttatgcaa atgttggtac tgtacagggt gccaatatcg
     2461 cagcggctat agcagcagct cttgctatta ctgtaggtga tattacatca gcagataagg
     2521 aaaaatctgt atatggcttc acatggagca acaatggcac tacagaaact tacttatact
     2581 ataacagtac taacggagaa actacaacag tagccacaga tattttagta aaacttagcg
     2641 gaaatgtaga tcttgatagc atatcgctaa atgcggatac agtaacagga gatattacta
     2701 ttgcataacg tatgattata gtg
//
LOCUS       DAPPKW010000146         2629 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.146, whole genome shotgun sequence.
ACCESSION   DAPPKW010000146 DAPPKW010000000
VERSION     DAPPKW010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2629
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.146"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..390
                     /locus_tag="RPW04_001936"
     CDS             <1..390
                     /locus_tag="RPW04_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDX6296011.1"
                     /translation="YILIGCYFCIAVPFVYRTIDNNIAALNLKEIVYSNYILGNGIFR
                     AIFRVIIPNLKDSILIAVFLSFSFLIGEFLYANILAGTQFETLQVYLYNIKNRSGHVS
                     SAAIVSYLLLIFIANFISSYISHRKKV"
     gene            392..1393
                     /locus_tag="RPW04_001937"
     CDS             392..1393
                     /locus_tag="RPW04_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002776579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDX6296012.1"
                     /translation="MSYLQVKNLKKSYKEKFVFDNINFSAKRGELITLLGPSGCGKST
                     LLRCICGLSTPQSGKIILDDKDITKISIKKRNIGMVFQNYALFPNLNVYENIAYGLKI
                     KKIDKKDIEKRVKKMLETVGLEKEIKSYPHQLSGGQAQRVALARSLVTKPSMLLLDEP
                     LSALDAKIRKHLREQIKLITKKMSLTTIFVTHDQEEALAMSDRIILMQDGKIAQNSDA
                     LELYHKPKNKFVASFIGSYNILSSEALLNLVKHDFKRDLAIRPETIEITKNGSIQAVV
                     KEKIFLGNIIRYSIDAKGISLKVDTLNHSLNSLYEVGDSVFLEIHLEMIKELDDLPV"
     gene            1377..2012
                     /locus_tag="RPW04_001938"
     CDS             1377..2012
                     /locus_tag="RPW04_001938"
                     /inference="COORDINATES: protein motif:HMM:TIGR01490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IB family hydrolase"
                     /protein_id="HDX6296013.1"
                     /translation="MIYLYDLDKTIIKEDSAKLWVDFMYENSFVGYDFVLKQAIFEED
                     YAKGVLDMNAYQEHFLMPLKGMKNSDLKPLLDRYIKDKIEPIIYKDALNLIDQNGGRK
                     IVISATNDFIVKAICRFICIDEFLATNSEIINGVYSARMSGIPAFKEGKVKRIKELLS
                     QDEFKDTVFYSDSINDLPLLKAAKIGVLVNPDDMLLEENKKLKFGVLKFKK"
     gene            complement(2060..2626)
                     /locus_tag="RPW04_001939"
     CDS             complement(2060..2626)
                     /locus_tag="RPW04_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009649887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HDX6296014.1"
                     /translation="MFLFETIKIIDKEICNLNFHIKRAENSTINGLKFDFKDILQPSF
                     NGTIRAKVIYDINGNLKNVEYFPYEIRNFYEFKLVNIDFDYDKKYLDRSKIEAVKSNF
                     NEIIMIKNGLITDTSIANIAVFDSYNDTWLTPKTPLLKGTTRDRLLQNRFLKQKDIDL
                     NDLLKTKRFAIMNAMIGFLELKLFKFSY"
BASE COUNT          947 a          342 c          447 g          893 t
ORIGIN      
        1 tatatactta taggctgtta tttttgtatc gcagtacctt ttgtatatag aactattgat
       61 aataatatcg cggctttaaa tttaaaagag atagtttact caaattatat tcttggaaac
      121 ggtatattta gagctatttt tagagtaata attccaaatt taaaagattc gatacttata
      181 gcagtatttt tatcgttttc atttttgata ggcgagtttt tatatgcaaa tatacttgcc
      241 ggtacgcagt ttgaaactct tcaagtatat ctttacaata taaaaaacag aagcggtcac
      301 gtttcaagcg cagctatcgt tagttatctg cttttgatat ttatagcaaa ttttataagt
      361 tcatatataa gtcacagaaa aaaggtttaa aatgtcatac ttgcaagtca aaaatttaaa
      421 aaaatcatat aaagagaagt ttgttttcga taatattaat tttagcgcaa aaagaggtga
      481 gctgataact ctcttaggtc cgtctggatg cggtaaatcc actcttctta gatgcatttg
      541 cggacttagt actccgcaaa gcggaaagat aattttagat gataaagata taacaaaaat
      601 tagcattaaa aagcgaaata tcggtatggt atttcaaaac tacgctcttt ttccgaattt
      661 aaatgtttat gaaaatatcg cttatggatt aaaaataaaa aaaatagata aaaaagatat
      721 agaaaaaaga gttaaaaaga tgcttgagac ggttggactt gaaaaagaga taaaatcata
      781 tccgcatcaa ctctccggcg gtcaggctca aagagtggcc cttgctagat ctcttgttac
      841 taaaccaagt atgttgttgc tagatgaacc tctttcggct cttgatgcaa agataagaaa
      901 acatctaaga gaacagataa aactgataac taaaaagatg agtttaacta cgattttcgt
      961 aactcacgat caagaagaag ctcttgccat gagcgataga ataattctta tgcaagatgg
     1021 taaaatagct caaaatagcg acgctttaga gttgtatcac aaaccaaaaa ataaatttgt
     1081 agctagtttt ataggaagtt ataatatact aagctccgag gcgcttttaa atttagtaaa
     1141 acatgatttt aaaagagatc ttgcgatcag accagaaact atagaaataa caaaaaacgg
     1201 atctatacaa gcagtggtaa aagagaagat atttttagga aatatcataa gatattccat
     1261 agatgctaaa ggtataagct taaaagtaga tactttgaat cactctctaa actctttgta
     1321 tgaagtgggc gatagtgtat ttttagaaat tcatttagaa atgataaagg agttggatga
     1381 tttacctgta tgatctcgat aaaactatta taaaagaaga tagtgctaaa ctttgggttg
     1441 attttatgta tgaaaactct tttgtagggt atgattttgt tttaaaacaa gctatttttg
     1501 aagaggatta tgcaaaagga gttcttgata tgaatgcata tcaagaacat tttttgatgc
     1561 ctttaaaagg tatgaaaaat agtgatttaa aaccgctttt agatagatat ataaaagata
     1621 aaatagaacc gattatttac aaagatgctc taaatttgat agatcaaaac ggcggcagaa
     1681 agatagttat ctcagctaca aacgatttta tagtgaaagc aatttgtcgg tttatttgta
     1741 tagatgagtt tttagccaca aacagcgaga taataaatgg agtttatagc gcgcggatga
     1801 gcggaattcc cgcatttaaa gagggaaaag tgaagcgtat aaaagagttg ttatcgcaag
     1861 acgagtttaa agatactgtt ttttatagcg acagtataaa tgatcttccg cttttaaaag
     1921 cggcgaaaat cggagttttg gtcaatcctg atgatatgct tttagaagag aataaaaagt
     1981 taaaatttgg tgttttgaaa tttaaaaaat agaacgaact tatctcgtaa agatataaat
     2041 ttgatctatt tatttaaatt tagtagctaa atttaaataa ttttagctct aaaaaaccta
     2101 tcatagcatt cataatggca aatctttttg tttttaaaag atcatttaag tctatatctt
     2161 tttgttttaa aaatcgattt tgaagcaatc tatctcttgt cgtacctttt agcagcggag
     2221 ttttcggcgt taaccatgta tcgttgtagc tatcaaatac ggcgatattt gctatacttg
     2281 tatctgtgat gagaccgttt tttatcatta ttatttcatt gaagttggat tttactgctt
     2341 ctatcttgct tctatcgaga tattttttat cgtagtcaaa gtctatattt actagtttga
     2401 actcataaaa attacgtatt tcatatggaa aatactccac attttttaaa ttcccattta
     2461 tatcataaat cacttttgct ctaatagttc cgttaaaaga aggctgcaaa atatccttaa
     2521 aatcaaattt aagaccgttt attgtagagt tttcggctct ttttatatga aaatttaagt
     2581 tacaaatctc tttatcgatg atttttatcg tttcaaaaag gaaaataga
//
LOCUS       DAPPKW010000147         2589 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.147, whole genome shotgun sequence.
ACCESSION   DAPPKW010000147 DAPPKW010000000
VERSION     DAPPKW010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2589
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.147"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            21..1418
                     /gene="fumC"
                     /locus_tag="RPW04_001940"
     CDS             21..1418
                     /gene="fumC"
                     /locus_tag="RPW04_001940"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDX6296015.1"
                     /translation="MEYRIEKDTMGEIKVPNDKYWGAQTERSLENFKIGKGTMPSEVI
                     EGFAYLKKACAIVNNKLGRLDDSKTKAIGEACDEILSGKLDGNFPLVVWQTGSGTQSN
                     MNLNEVIANRSTELLGEDFRTKKLVHPNDDVNKGQSSNDTYPTAMRIAFVLELQKQLF
                     PAIDKLLATLEAKSREFKNIVKIGRTHLQDATPLTLGQEFSGYAHMLKASKAQVLATL
                     PFLEELAIGGTAVGTGLNSHPDFSPMVSEVLNDLTKTEFKFKSHPNKFHGLTSHDAEV
                     FLSGALNGLASNLMKIANDIRWLASGPRCGIGEINIPENEPGSSIMPGKVNPTQCEAV
                     TMVAVQVAGNHVSVAMAASQGNFELNVFKPVLTHNLLESIRLLSDAMVSFNDHCALGI
                     TANEAKIDKLLHESLMLVTALNPHIGYENAAKIAKTAHKHGTTLKEEAINLGLLTAAQ
                     FDEWVKPEDMTAPKK"
     gene            complement(1485..>2589)
                     /locus_tag="RPW04_001941"
     CDS             complement(1485..>2589)
                     /locus_tag="RPW04_001941"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296016.1"
                     /translation="IWADGFEFIAEDLLKFENINLKNSIAILTYGIYGNRHFGDIFDI
                     LIKNNQNLFIVNTTIENYEKDRNFMGLKNILIPMNCLKYYNFKVLLSSVNISYQDECF
                     AHQNTFAMVFSHHMTMLRSYLIAHKFCDITKQESIDTFGTAIGCYYIAAMKSDEIYFN
                     ALNSKAKLLKLGYPNIDKQIKNYTPKKPQKSVLVMFHHFKSYKKVMEAIDKLLNLKYE
                     IIFRPNPHFHNQKENVEITKFFQGKKGFVYDDSPKLTNETLQKAICSIGDYSSTIFSF
                     PLTTLKPCMLFYPSDIMGDDFEKENINGKMLSFADENLHIISRSVDELVNHIENLNLK
                     EWNDKILKYRNEEIYNLGNSSQVISDLIMQKAK"
BASE COUNT          867 a          430 c          455 g          837 t
ORIGIN      
        1 aaaaattgaa aggaatagtt atggagtatc gtatcgaaaa agacacaatg ggtgagatca
       61 aagttccaaa cgacaagtac tggggcgctc aaacagaaag aagtttggag aactttaaaa
      121 tcggcaaagg aactatgcca agcgaggtta tagaaggttt tgcttatctt aaaaaagctt
      181 gcgctatcgt aaataataaa ttaggtcgct tagacgactc aaaaacaaaa gctatcggag
      241 aagcttgcga cgagatatta agcggcaaac tagatggaaa ttttcctctt gtagtatggc
      301 aaacaggaag cggaactcag tcaaatatga atttaaatga agttatcgct aatcgctcta
      361 ccgagctttt aggcgaggat tttagaacaa aaaaattagt tcatccaaac gacgacgtaa
      421 ataaaggtca aagttcaaac gatacctatc cgacagctat gagaatcgcc tttgttttag
      481 agctgcaaaa acaacttttt ccggcgatcg ataaactttt agctacactt gaggcaaaaa
      541 gtagagagtt taaaaatatc gtaaagatcg gtagaactca cttacaagac gctactcctt
      601 taactttagg tcaagagttt agtggatatg ctcatatgtt aaaagctagc aaagctcaag
      661 ttttagctac tcttccgttt ttagaagagc ttgctatcgg cggaactgct gttggtacgg
      721 gtctaaattc tcatcctgat tttagtccta tggtgagcga agttttgaac gatttaacaa
      781 aaacagagtt taagtttaaa tctcatccaa acaagttcca cggcttaaca agtcatgatg
      841 cagaagtttt cttaagcggt gcattaaacg gacttgcatc aaatttaatg aaaatagcaa
      901 acgacattcg ttggttagca agtggtccaa gatgtggtat cggtgagata aatatccctg
      961 aaaacgaacc cggaagctct atcatgccag gtaaagtaaa tcctactcaa tgcgaagccg
     1021 taaccatggt agccgtccaa gtagcaggaa atcacgtaag cgttgcgatg gctgcgtctc
     1081 aaggtaactt tgagctaaac gtatttaaac ctgtacttac tcataacttg cttgagagta
     1141 ttcgtctttt aagcgacgct atggttagct tcaacgatca ttgcgcttta ggaatcactg
     1201 caaatgaagc caaaatagat aaacttcttc atgaaagcct tatgctagta actgcgctaa
     1261 atccgcatat cggatatgaa aatgcggcaa aaatagcaaa aactgctcat aagcacggta
     1321 cgactttaaa agaagaagct ataaatttag gtcttctaac agctgctcag tttgatgagt
     1381 gggtaaaacc tgaagatatg actgctccta agaagtaata ttataagtaa catttatgtt
     1441 aagctcggaa ttaatcgagc ttaacttcct aatatctttt ttatctattt agctttttgc
     1501 ataattagat ctgaaataac ctgacttgag tttccaagat tatatatttc ttcatttcta
     1561 tatttaagta ttttatcgtt ccactctttt aaatttaaat tttctatatg atttactaat
     1621 tcatcaacac tcctagaaat aatatgcaag ttttcatctg caaaacttag cattttaccg
     1681 tttatattct ctttttcaaa atcatctccc ataatatcag atgggtaaaa tagcatgcaa
     1741 ggcttaagtg tagtaagcgg aaagctaaaa atcgtagaag agtagtcccc tatagaacaa
     1801 atagcttttt gcagagtttc attcgtaagc tttggggagt cgtcatagac aaatcctttt
     1861 ttgccttgaa aaaacttagt tatttctaca ttttcttttt ggttgtgaaa gtgaggattt
     1921 ggtctaaaaa ttatttcata ttttaaattt agaagtttat cgatagcttc cataaccttt
     1981 ttgtatgatt taaaatgatg aaacattact aagacagatt tttgcggctt ttttggagta
     2041 taatttttaa tctgcttatc gatatttgga taacctagct ttaagagttt agccttgcta
     2101 tttaaagcgt taaaatagat ctcatcgctt ttcatagcag ctatatagta acaccctata
     2161 gccgttccaa aagtatctat gctctcttgt tttgttatat cgcaaaattt atgtgctata
     2221 agatagcttc ttaacatggt catatgatga gaaaatacca tggcaaatgt attttgatgt
     2281 gcgaaacact catcttgata gctaatattt acactagaaa gtagaacctt gaaattgtaa
     2341 tattttaagc aattcatagg tatcaagata ttttttaatc ccataaaatt tctatctttt
     2401 tcataatttt ctattgttgt atttactata aaaagatttt gattattttt tataagaata
     2461 tcgaaaatat cgccaaaatg tctatttcca tagataccgt aagtgagaat ggcaatgctg
     2521 ttttttaaat ttatattctc aaatttaagt aaatcttcag ctataaattc aaatccgtca
     2581 gcccagatt
//
LOCUS       DAPPKW010000148         2373 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.148, whole genome shotgun sequence.
ACCESSION   DAPPKW010000148 DAPPKW010000000
VERSION     DAPPKW010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2373
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.148"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            102..1796
                     /locus_tag="RPW04_001942"
     CDS             102..1796
                     /locus_tag="RPW04_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014474671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDX6296017.1"
                     /translation="MLFSDFDLSSAILEALKELNYDAPTQIQQVAIPAIMQGKDILAG
                     ARTGTGKTAAFALPILEKLSSKERNKKRPQTRVLVLVPTRELANQVTQNIKSYAKKLP
                     FKTLPVFGGVSSYPQIQALKSGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRM
                     FDMGFIHDIKQIVKMLPEKRQNLLFSATYPSEVMSLCNSMLKDPLRIQIEEQNSTALN
                     IIQRVILVDRDKKMELLNEVFGVESIDQALVFTRTKRSADKCSSYLHTLGFSVAALHG
                     DKSQSVRSKTLEKFKNGKTKILVATDIAARGLDIKELPFVINLELPNVPEDYVHRIGR
                     TGRAGNDGVAISLVCVDEFKFLIDIEKLIDKKLIRESFSGFEADLRVKPQPIRRGQNM
                     NKSSERDDRNGNKIDKKERKPREFNSDKKDESKREYRRDGVKSEFSKDKKEFSKNSRA
                     KDSNSSFDGEAKREFKFKKDDKKFGEKKKSFGDKKSFDDKDKKFSGEKKFSSDKKPRS
                     SDKSSDEKYSGNKFSPKKKFGSDKPDRGDKFTKDAPKPRASSRPRKPQSDKKSTTK"
     gene            2003..2155
                     /locus_tag="RPW04_001943"
     CDS             2003..2155
                     /locus_tag="RPW04_001943"
                     /inference="COORDINATES: protein motif:HMM:NF033894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EexN family lipoprotein"
                     /protein_id="HDX6296018.1"
                     /translation="MRILTPVIGSLLFAGFLVGCGEGPKAKTVEYYKQNIPEAEARSK
                     ECKAAK"
BASE COUNT          914 a          347 c          435 g          677 t
ORIGIN      
        1 ttgctttttg atattctctt tatattttag ttttataaga tcaaacttat ttttacaaat
       61 ttttaaggct ttagccttta acacaaaagg aataaatttt tatgttattt tcagatttcg
      121 atctcagctc tgctatatta gaagcattaa aagagctaaa ttacgacgct cctacgcaga
      181 tccaacaagt cgcgatacct gctataatgc aaggaaaaga tatcttagca ggagctagga
      241 caggcacggg aaaaactgct gcatttgcgc tacctatatt agaaaaatta tcgtcaaaag
      301 aacgcaacaa aaagcgtcct caaactcgtg ttttagtgct tgttcctaca agagaacttg
      361 caaatcaagt cacgcaaaac atcaaatctt acgcgaaaaa gttaccgttt aaaactttgc
      421 cagtatttgg cggagttagc tcttacccac aaattcaagc tttaaaaagt ggtatagata
      481 tcgtggtggc gactcctggc agacttttgg atcttgcttt gcaaaatgct ttaagcttag
      541 agcatatcga tacgctagta tttgacgagg ctgatcgtat gtttgatatg ggatttatcc
      601 acgatatcaa acaaatagta aaaatgcttc ctgaaaaaag acaaaattta ctattttccg
      661 cgacgtatcc aagtgaggtt atgtcgcttt gtaactctat gctaaaagat cctttgcgta
      721 tccaaataga agagcaaaac agcactgctt taaatatcat acaacgcgtg attttagtag
      781 atcgagataa aaaaatggag cttttaaacg aggtttttgg agtggagagt atagatcaag
      841 ctttggtttt tactcgtacc aaaagaagtg cggataaatg ttcatcttat ctacatactt
      901 taggctttag cgtagctgct ttgcatggag ataaaagtca aagcgtgcgt tcaaaaacac
      961 ttgagaaatt taaaaacggt aaaacaaaaa ttcttgtagc aacggatata gcagcgcgcg
     1021 gattagacat aaaagaactt ccgtttgtta taaatttaga gcttccaaat gtgcctgagg
     1081 attatgttca taggataggt agaacaggac gcgccggaaa tgatggcgtt gcgatatctt
     1141 tggtttgcgt tgatgagttt aagtttttaa tcgatattga aaaattgatc gataaaaaac
     1201 taataagaga aagctttagc ggatttgaag ccgatctaag agtaaaacct cagcctatca
     1261 gacgtggaca aaatatgaac aaaagctcag aacgagatga cagaaacgga aataaaatag
     1321 ataaaaaaga gagaaagcca agagagttta atagcgataa aaaagacgag tcaaaacgcg
     1381 aatacagaag agatggtgtc aagagtgaat tttcaaaaga caaaaaggaa ttttctaaaa
     1441 atagtcgcgc aaaagattca aatagtagtt ttgatggcga agcaaaaaga gaattcaaat
     1501 ttaaaaaaga cgataaaaaa tttggcgaga aaaagaaatc tttcggcgat aaaaaatctt
     1561 ttgatgacaa agacaaaaaa tttagcggcg aaaagaaatt tagctctgat aaaaagccta
     1621 gaagtagtga caaaagttct gatgaaaaat attctggtaa taaatttagc ccgaaaaaga
     1681 aatttggaag tgacaaacca gacagaggcg ataaatttac taaagacgct ccaaagccaa
     1741 gagcttcaag cagaccacgc aaaccacaat ctgataaaaa atccactaca aaatagatat
     1801 tttatagcta tttaaccaaa tttagcatta tgaaaatagt gctaaattta tctgtattga
     1861 aaaataaaaa ttaatattaa gggtatataa atattgtata atttttattt gtaattaatt
     1921 tactaagatc acttctattt tgtttattct tatattttga aaataaatat ttcaaaaaat
     1981 attaaaactt taggagagaa aaatgagaat tttaacacct gtaattggtt ctttattgtt
     2041 tgctggattt ttagttggat gtggtgaagg gccaaaggct aaaacagtag aatactataa
     2101 acaaaatata cctgaagcag aagctagatc taaggaatgt aaagcagcta aataattaac
     2161 tcaaattcaa atagaagatt gtaaaaatgc aggagctgct ttatacgctg aataatttaa
     2221 aaaaggtaca ggtggtggat acggcagaaa atttgatcca aaaacacata caataacacc
     2281 tatagagtaa aaaaatgaat aatgactttt ttcaacaact tggtaattta acaacaaaga
     2341 ggatttatcc tctttgccta ctaaattaat tta
//
LOCUS       DAPPKW010000149         2372 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.149, whole genome shotgun sequence.
ACCESSION   DAPPKW010000149 DAPPKW010000000
VERSION     DAPPKW010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2372
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.149"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..918
                     /locus_tag="RPW04_001944"
     CDS             <1..918
                     /locus_tag="RPW04_001944"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296019.1"
                     /translation="DLDIFGKLYKTSSINTKTFNINYPGFSVSYNANCDSRSFYFKDK
                     IDFEKLQNRDKKLIVLFGNSFIRHDWLKTDKGGISDFIKVNLKNQIVINAAIHGATLY
                     EQLLVYNALFYKLKPDVVMSFFGGTDYFHAMLGDEILLKNHSIIYNTSISEVDTKELF
                     KSSLPLYLDYTYSLKKLVKEPPNLKEICNALYDRYVQFYSVVNANGGLFLGFLQPFLS
                     KKKYLTSSEQELNKPHSIENEILKTTNNFIDEFNKTSLNLKNYTDLNEIIKDESEICF
                     YDHWLHCTKYANEKISKVIIKRLKTSEIN"
     gene            915..1634
                     /locus_tag="RPW04_001945"
     CDS             915..1634
                     /locus_tag="RPW04_001945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296020.1"
                     /translation="MSKIFIYPSGINAKILAFHIEKLYNKQPIFIDDSDYETSLENRK
                     KIIKKDDIILLASKTHEQNLISNLEKFDIANYCDGISLIAKKLNEIYKNKFGYSIGVI
                     LEKNINDKYLNIPYNGYELNSQIVYFTQNQTAYKEAKKRFKNVVMASSWWLSYFDFVT
                     CYISSDYQLGYNMPDVKTFVLGNYYYVGAFHDFYHSKEDIYEKIGFMASRMDSFTLAH
                     AKEFYETLKPAFSKFNNGGGC"
     gene            1628..2260
                     /locus_tag="RPW04_001946"
     CDS             1628..2260
                     /locus_tag="RPW04_001946"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296021.1"
                     /translation="MLKLGYKSIENDMKNYSCTQHTDTIIIPITENKRYGFKDMLVKF
                     AKILLENGFRVLFKAHYQHKELLNTYEKDIQNLSEYQNFVLYTKPHLSLDELKRSITL
                     VEFRSSLNYTYALITKKPSILLIPPSITKNRTNLKNNFYNKNLHIELTDLNSALQMVK
                     ILQNDSNVQKLHKKMIEYYIQNEMYSYDDILEFIQNYHLKQLKLRKNLLD"
BASE COUNT          967 a          315 c          345 g          745 t
ORIGIN      
        1 gatctagata tatttggaaa actctacaaa acatcatcta taaatacaaa aacttttaat
       61 ataaattatc cgggatttag cgtatcttat aatgctaatt gtgatagcag aagcttttat
      121 tttaaggata aaatagactt tgaaaagctg caaaatagag ataaaaaact aattgtgctg
      181 tttggaaata gctttataag acatgactgg ctaaaaacgg acaaaggtgg aattagtgat
      241 tttataaaag taaatttaaa aaaccaaata gtgatcaacg ctgcgataca tggtgcaact
      301 ttatacgaac aactgcttgt ttataatgct ctattttata agctcaaacc tgatgtggtc
      361 atgagttttt ttggaggtac ggactacttt catgctatgt taggagatga aatactgtta
      421 aaaaatcatt ctatcatcta caacacaagt atcagcgaag tagatactaa agaactattt
      481 aaaagtagct tacctctata tctggattat acttatagtc ttaaaaaatt agttaaagag
      541 ccaccaaatt taaaagaaat ttgcaatgcg ctttatgata gatatgttca attttatagt
      601 gtggtaaatg caaatggtgg attattttta ggatttttac aaccgttttt aagtaagaaa
      661 aagtatttaa cgtctagtga gcaagagcta aataaaccac atagcataga aaatgaaatt
      721 ttaaaaacaa caaataattt tatagatgag tttaacaaaa caagtttaaa tttaaaaaat
      781 tatacggatc taaatgagat tataaaagat gagtctgaaa tctgttttta tgaccattgg
      841 ctgcactgca caaagtatgc aaatgaaaaa atttctaaag taataataaa acgcttaaaa
      901 acatcggaga taaattgagt aaaattttta tctatccaag cggcataaac gctaaaattc
      961 tagcattcca tatagaaaaa ttatataata aacagcctat ttttatagat gacagtgatt
     1021 atgaaactag tctagaaaat agaaaaaaaa ttattaaaaa agatgatatt attttgctag
     1081 ctagtaaaac tcatgagcaa aaccttatat caaatttaga aaaatttgat atcgcaaact
     1141 actgtgatgg tatatctctt atagccaaaa agctaaatga aatttataaa aataagtttg
     1201 gatactctat aggagtaatt cttgaaaaaa atatcaatga taaataccta aatatcccat
     1261 ataacggata tgagctaaac tcgcaaatag tatattttac ccaaaatcaa acagcatata
     1321 aagaagctaa aaagcgattt aaaaatgtag ttatggctag ctcttggtgg ctttcatatt
     1381 ttgattttgt aacatgctat atatctagtg attatcaact tggatacaat atgccagatg
     1441 ttaaaacatt tgttcttgga aactattatt atgttggagc atttcatgat ttttatcata
     1501 gcaaagaaga tatttatgaa aaaataggat ttatggctag tagaatggac agctttacgc
     1561 tagctcacgc taaagaattt tacgaaactc taaagcctgc tttttctaaa tttaataatg
     1621 gggggggttg ctgaaattag ggtataaaag tatagaaaac gatatgaaaa attactcttg
     1681 tacgcaacat acagatacaa tcatcattcc tattactgaa aataaacgtt atggttttaa
     1741 agatatgtta gtaaaatttg ccaaaatact tttagaaaac ggatttagag ttctttttaa
     1801 agctcactat cagcataaag aacttttaaa tacatatgaa aaagatatac aaaatcttag
     1861 cgaatatcaa aacttcgttc tatacacaaa accgcatcta agtcttgatg agcttaaacg
     1921 aagtataact ttagttgaat ttagaagcag cttgaattac acatacgcgc tgataactaa
     1981 aaaacctagt atattattga ttccgcctag tataactaaa aatagaacaa acttaaaaaa
     2041 caacttttat aataaaaacc tacatatcga attaaccgat ctaaacagcg ctttacaaat
     2101 ggtaaaaatt ttacaaaatg atagcaatgt tcaaaaatta cataaaaaaa tgatagaata
     2161 ctacatacaa aatgaaatgt actcttatga tgatatacta gaattcatac aaaactatca
     2221 tctaaagcag ttaaaactaa gaaaaaattt attagattaa aggagacaaa tgcactattt
     2281 catataccca aacggtggac attcaaaaat gctcgctcac aatcttgatc tgttaggtca
     2341 ttcatatact tttttggatg attttaaaga tt
//
LOCUS       DAPPKW010000150         2285 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.150, whole genome shotgun sequence.
ACCESSION   DAPPKW010000150 DAPPKW010000000
VERSION     DAPPKW010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2285)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2285)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.150"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(315..390)
                     /locus_tag="RPW04_001947"
     tRNA            complement(315..390)
                     /locus_tag="RPW04_001947"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(355..357),aa:Ala,seq:tgc)
     gene            complement(482..1996)
                     /locus_tag="RPW04_001948"
     rRNA            complement(482..1996)
                     /locus_tag="RPW04_001948"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          639 a          519 c          429 g          698 t
ORIGIN      
        1 atttaaatat agatttataa gacggaaagc attaactact attaagtaag ttttaaaagc
       61 tcaatagctt gtgatgttaa atttaataat taatctattg tagttattgg gataacagat
      121 ttggtgatta attacttgct aaaattagtc tatatttaaa gcttcaacaa gtcctgtaaa
      181 attgttttat tttattaaaa cttgattgtg acttttaaca atgatatttt aaataacgtt
      241 tagactaaag tctaatgaga aagtttaaat ataaaaatca agctttctaa ttaaactttt
      301 ataatattaa actatggtgg agaatagcgg gatcgaaccg ctgacctcct gcgtgcaaag
      361 caggcgctct cccagctgag ctaattcccc atgtcaatcc ctcaaaccta aacaagtgtg
      421 attgagctat cgtatctttc ttttactagt agctgtgaga cttactagta ttgtactcta
      481 gaaaggaggt gatccaaccg caggttctcc tacggttacc ttgttacgac ttcaccccag
      541 tcgctgattc cactgtgggc ggtagctagt ttagcattcc gacttcgagt gaaatcaact
      601 cccatggtgt gacgggcggt gagtacaaga cccgggaacg tattcaccgt agcatggctg
      661 atctacgatt actagcgatt ccggcttcat ggagtcgagt tgcagactcc aatccgaact
      721 gggacatatt ttatagattt gctccatctc gcgatattgc atctcattgt atatgccatt
      781 gtagcacgtg tgtcgccctg ggcataaggg ccatgatgac ttgacgtcgt ccacaccttc
      841 ctcctccttg cgaaggcagt ctatttagag tgctcagccg aactgttagc aactaaatac
      901 gtgggttgcg ctcgttgcgg gacttaaccc aacatctcac gacacgagct gacgacagcc
      961 gtgcagcacc tgtctcaact ttctagcaag ctagcactct cttatctcta agagattagt
     1021 tggatatcaa gcccaggtaa ggttcttcgc gtatcttcga attaaaccac atgctccacc
     1081 gcttgtgcgg gtccccgtct attcctttga gttttaatct tgcgaccgta ctccccaggc
     1141 ggtatactta atccgttagg tgcattactg ccgtgactag cacagcaaca actagtatac
     1201 atcgtttagg gcgtggacta ccagggtatc taatcctgtt tgctccccac gctttcacgc
     1261 attagcgtca gttgagttcc agcagatcgc cttcgcaatg ggtattcctg gtgatctcta
     1321 cggattttac ccctacacca ccaattccat ctgcctctcc ctcactctag attatcagtt
     1381 tctcaagcag tttaacagtt aagctgttag atttcacaaa agacttgata atccgcctac
     1441 gcgtccttta cgcccagtga ttccgagtaa cgcttgcacc ctccgtatta ccgcggctgc
     1501 tggcacggag ttagccggtg cttattcgtt aggtaccgtc atggttcttc cctaacaaaa
     1561 ggagtttacg ctccgaaaag tgtcatcctc cacgcggcgt tgctgcttca gggtttcccc
     1621 cattgagcaa tattccctac tgctgcctcc cgtaggagtc tggaccgtgt ctcagttcca
     1681 gtgtgactga tcatcctctc agaccagtta tgcgtcaaag ccttggtaag ccattacctt
     1741 accaactagc tgatacaata tagtctcatc ctacaccgaa aaactttccc gacttaactt
     1801 atgttaagaa ggagtatgga gtattagcag tcatttctaa ctgttgtcct ccagtgtagg
     1861 gcagattaac tatacattac tcacccgtgc gccactaagt attaaaagag caagctctct
     1921 taatactccg ttcgacttgc atgtattagg cacgccgcca gcgttcactc tgagccagga
     1981 tcaaactctc cataaaaaaa tcttctctag cagtttagca agctaaactt aagaagtaat
     2041 actaaagaca aagattgcaa aagcaatcta aatttaatgt tttagcttag agctaaaaca
     2101 gatctttaga taattaatga ttatgaagtt tttaatctaa aaaacttttt aatgttttta
     2161 tatattaata agtataaaga taatataatt actctatact aatatagaac taactttaaa
     2221 attagttctg gctcaatcga tcacttgttt agatttcaaa gattgactat aaaaatagtt
     2281 taaca
//
LOCUS       DAPPKW010000151         2248 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.151, whole genome shotgun sequence.
ACCESSION   DAPPKW010000151 DAPPKW010000000
VERSION     DAPPKW010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2248)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2248)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2248
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.151"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            105..761
                     /locus_tag="RPW04_001949"
     CDS             105..761
                     /locus_tag="RPW04_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012662254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDX6296022.1"
                     /translation="MIISICNEKGGSGKSTLALNIAISQSISKKELPLLIDTDPQKSI
                     ATFLNIRNEENHPKIFDFAYKYGENLKDFLQNYTGNKDIIIDTGGRDSREMRIAIALS
                     DMVIIPTIPSQFDVSVLDKMVDIVKMAKEQNEKLMANIVINRASTNPFLQKKIESLKS
                     FIEEIKQDYIKLAETIIYERERYKVATQIGLGVVEIKDGHKTENEIKKLCLELFNTNK
                     "
     gene            777..1352
                     /locus_tag="RPW04_001950"
     CDS             777..1352
                     /locus_tag="RPW04_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009495784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296023.1"
                     /translation="MDFKRTTNSTANLDEFINGAETQNESIKKNETYLYVHAGFSKEI
                     GDRIKQKYSKMSLTKWIEQALIQEIPHIKENVLPFIYQKAEWHNMTIQNFVKFKMGLL
                     DTPQSKTPKDKKENIRYIGIKTQNKENKEAIKRNAENLGLSVRSYSKIKILATYELKD
                     MFTFEELMQFKAEAMNYDLELDEYITMRIKG"
     gene            complement(1382..2188)
                     /locus_tag="RPW04_001951"
     CDS             complement(1382..2188)
                     /locus_tag="RPW04_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HDX6296024.1"
                     /translation="MCNFSFYFEKGNFVLEATKKNSKKYDSSLVFKNKMNSILFPINF
                     TARDYDIFFTICWYAKQQGYAENKGFIEMPYSEIARFFDKNINKTRFNDEVKSFSNKV
                     LGFKGSAVYRTEYIDVDNDEVTAVGVFFIEMEAFRNKQSLRFKINPKALDILFGVLNF
                     MKINLYDFVSIKGKFAKTLYRLLLQYENIKSDQNGFKCVKFNRNDFENLMAVPDYYES
                     SNIDTRVIVPSINELNKNYFKELLFEKQYSSNDNKKIIGYSFKFVLKDAS"
BASE COUNT          956 a          307 c          326 g          659 t
ORIGIN      
        1 tatatacaag ctttaaataa gcaattatat aagctaaaaa caagctataa ttaagctaat
       61 tttttgtata atataaccac aataaataaa aaaggaattt ataaatgatt atatcaattt
      121 gtaatgaaaa agggggaagt ggaaaaagta ctttggcttt aaacatagct ataagtcaga
      181 gcatatctaa aaaagaatta ccactattaa tagatactga cccacaaaaa tcaatagcta
      241 catttttaaa catacgaaat gaagaaaacc atccaaagat atttgatttt gcgtataaat
      301 acggcgaaaa tttaaaagat tttttacaaa actatacagg aaacaaagac ataatcattg
      361 acacaggtgg aagagacagc agagaaatga gaatagctat agctctaagc gatatggtta
      421 taataccaac aatcccaagc caatttgatg taagtgttct agataaaatg gtagatattg
      481 taaaaatggc aaaagagcaa aacgagaaat tgatggccaa catagtaatc aacagagcct
      541 ctacaaatcc ttttttgcaa aagaaaatag agagtttaaa aagttttata gaagaaataa
      601 aacaggacta cataaaactg gcagaaacaa ttatatacga gcgggaacgc tacaaagtag
      661 caactcaaat tggacttgga gtagtagaga taaaagacgg ccataaaaca gaaaatgaaa
      721 ttaaaaaatt gtgccttgag ctttttaata caaacaaata gattacggag attaaaatgg
      781 attttaaaag aaccacgaat tcaacggcaa atttagatga atttataaac ggagcagaaa
      841 cgcaaaatga atcaataaaa aaaaatgaaa catatttata tgtgcatgca ggattttcaa
      901 aagaaatagg agatagaata aagcaaaaat actcaaaaat gtcattaaca aaatggatag
      961 aacaggcgtt gatacaagaa ataccacaca taaaagagaa tgtattacct tttatttatc
     1021 aaaaagctga gtggcacaat atgaccatac aaaattttgt taaatttaaa atgggcttat
     1081 tagatacacc tcagtcaaaa acaccaaaag ataaaaaaga aaatataaga tacattggaa
     1141 taaaaactca aaacaaagag aataaagaag caataaaaag aaatgcggaa aatttaggtt
     1201 taagtgtaag aagttactcg aaaattaaaa ttttagctac atatgaatta aaagatatgt
     1261 ttacatttga agagctgatg cagtttaaag cagaagcgat gaattacgac ttagaattag
     1321 acgaatacat cacaatgaga ataaagggat gaaaaactac tgaaacaaca tatttgcttt
     1381 tttatgaagc atcttttaaa acaaatttga aagaataacc gattattttt ttattatcgt
     1441 tgctagaata ttgtttttca aatagaagct ctttaaaata gtttttattt aattcattta
     1501 tggatggcac aatcactctc gtgtctatat tactagactc ataataatca ggcacagcca
     1561 tcaaattttc aaagtcattt cgattaaatt taacacattt aaagccattt tggtcggact
     1621 ttatattttc atattgaagt aaaagacgat aaagagtttt tgcaaattta ccctttatag
     1681 acacaaaatc atatagatta attttcataa aattaagaac accaaaaaga atgtcaagag
     1741 cttttgggtt tattttaaat ctcaagcttt gtttatttct aaaagcctcc atttcaataa
     1801 agaaaacgcc aactgctgta acttcatcat tatcaacatc aatgtattcg gttctataaa
     1861 cagcacttcc cttaaagcca agaactttgt ttgaaaaact cttaacttca tcgttaaacc
     1921 tagttttatt tatattttta tcaaaaaaac gagcaatctc tgaataaggc atttctatga
     1981 agcctttatt ctcagcatag ccttgctgtt ttgcatacca gcaaattgta aaaaaaatgt
     2041 cataatctct agctgtaaaa ttaataggaa ataaaataga gttcatcttg tttttaaaaa
     2101 caagagagct gtcatatttt tttgaattct tttttgtagc ctctaacacg aaattgcctt
     2161 tctcaaaata gaaagaaaaa ttacacatat ttatacctca caatatttaa atttactgca
     2221 aagtataaga taagtttaat gtgttgaa
//
LOCUS       DAPPKW010000152         2247 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.152, whole genome shotgun sequence.
ACCESSION   DAPPKW010000152 DAPPKW010000000
VERSION     DAPPKW010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2247
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.152"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            132..2120
                     /locus_tag="RPW04_001952"
     CDS             132..2120
                     /locus_tag="RPW04_001952"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012801.1,HMM:NF019335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDX6296025.1"
                     /translation="MRFSSVIASSLLCATVLNASSDTPSKNSVVVLDKISVSSKIEKN
                     ILDEPTKVEIAGKETILESPDLAKSLLNVSGFSMTRKGGGGSEILYRSQGAGRLPIFI
                     DNSLLHGGCGGRMDTAVTYISPENYRSVRIIKGPQDVRFGALISGAVLFDRDMLRLSE
                     TTFNGNLNALYGSFDRRETSVNLLGGNDLGSLQATGGIYKSGDYKDGDGNNVHSKYSK
                     KTGALIATFTPLDDTALSFSADFGSGKAAYADRAMDGVKFDRTSFGFGLEQGFGEHQL
                     NMQAFYHEIDHVMDNFSLRPNINKGNSYNYSNPKREIKGIRAEGVLNFGDLTGFIGAS
                     YSTDEHSSRNGMGSSGGIVTNLVSSMPYRKNAVIDYTSGFAQGEYIEGDYGIFSGVRI
                     DHVSIDKYNAGQLATTKDQNPVSAFVRYERYLNDLTLYAGLGHAQRVADFWEFSKVGG
                     MDLNKEKNSQIDLGSVLKNDNSEVSFNLFASKIDDYIILRYGTATSAFNTDVMMLGGE
                     LDAEILLQDLFKIGGGASYTYGKNLKNTNGLRDGDPLPQISPLAFKFLVGLEQKSWFA
                     NAQFYANAAQHRYKEGYGNAIGKDLGYSDDFWTVGLYGGYKYKNYQFLVAAENLNNAL
                     YSYHNSKNGAAISTLDIPATTRVYEPGRSFWIKFKAHF"
BASE COUNT          764 a          324 c          454 g          705 t
ORIGIN      
        1 tagacttcgt ttatttgcag tttaaaacta aaatatagtg caagttccta tatttatttt
       61 taacaataaa atttaattta ataataaaaa tatctattta ctaatagtta taaattcata
      121 aaaggatcaa aatgcgtttt tcatctgtca ttgcaagctc tttgctatgt gctactgttt
      181 taaatgctag ttcagacact cctagcaaaa attcagtcgt ggtgttagat aaaatcagtg
      241 ttagctcgaa gatagaaaaa aatatcttag atgagcctac aaaagtagaa attgcaggaa
      301 aagagactat tttggaatct ccggatctag caaagtcgct tttaaacgtt agcggatttt
      361 ctatgactag aaaaggtggc ggaggaagtg aaattttata tcgttctcaa ggcgccggaa
      421 ggcttcctat attcatagat aactctttat tgcatggagg ttgcggcggt agaatggaca
      481 ctgccgttac ttatatatct cctgaaaatt atagatcagt taggatcatt aaaggacctc
      541 aagacgtaag attcggagct cttataagcg gcgcggtgtt atttgataga gatatgcttc
      601 gtcttagcga aactactttt aatggaaatt taaatgcgct ttatggtagt tttgatagaa
      661 gagaaacaag cgtaaattta ttaggcggaa atgatctagg aagcttgcaa gcaaccggcg
      721 gaatttataa aagtggtgat tataaagatg gcgatggtaa caatgttcat tctaaatatt
      781 caaaaaagac aggcgctctt atagctacat ttactccttt agatgatact gctttaagct
      841 ttagtgctga ttttggaagc ggaaaagccg cttacgcaga tagagctatg gatggagtaa
      901 agtttgaccg cacgtctttt ggttttggat tggagcaggg ctttggcgag catcagctaa
      961 atatgcaagc tttttatcat gagatagatc acgttatgga taatttttct ctacgaccaa
     1021 atatcaacaa aggaaatagt tataattata gcaacccaaa aagagagata aaaggtatca
     1081 gagccgaggg agttttaaat ttcggtgatt taacaggatt tataggtgct tcatatagta
     1141 cagacgaaca tagctcaaga aacggcatgg ggtcaagcgg cggaatagta acaaatttag
     1201 ttagtagtat gccttataga aaaaatgcag taatagacta tacttctgga tttgctcaag
     1261 gcgaatatat agaaggcgat tatggaatat ttagcggcgt taggatagat cacgttagca
     1321 tagataaata taacgcaggg caattagcca ctacaaaaga tcaaaatccg gtatctgcgt
     1381 ttgttaggta tgagcgttat ttaaatgatt tgactttata tgcgggttta ggacatgctc
     1441 aaagagttgc tgatttttgg gagttttcaa aagtaggcgg tatggattta aataaagaaa
     1501 aaaatagcca aatcgactta ggaagcgtac ttaaaaatga taattccgag gtgagtttca
     1561 atctttttgc ttctaaaata gatgattata taatacttcg atacggtact gctacgagcg
     1621 cgtttaatac cgatgttatg atgcttggcg gagagcttga tgcagagata ttgctacaag
     1681 atctatttaa aataggcggt ggcgcttcat atacatacgg aaaaaattta aaaaatacaa
     1741 acggtttaag agacggcgat cctctacctc aaatttcacc gcttgcattt aaatttttag
     1801 ttggacttga gcaaaaatca tggtttgcaa atgcacaatt ttatgctaat gcagctcaac
     1861 atcgctataa agaaggttat ggaaatgcca taggaaagga tttaggatat agtgatgatt
     1921 tttggacggt tggactgtat ggcggatata aatataaaaa ttatcaattc ttggttgcgg
     1981 ctgaaaattt aaataacgca ctttatagtt accataactc caaaaacgga gcagcaattt
     2041 ctactttaga tatccctgct actactagag tttatgaacc gggacgaagc ttttggataa
     2101 aatttaaagc gcatttttaa tcaatataaa tttaattaat acaaaattcc atactctata
     2161 taccaaatat ttatctagag tatggaattt atttctattt agacttttaa atttcctgta
     2221 tttaagctat aataacctta atatata
//
LOCUS       DAPPKW010000153         2238 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.153, whole genome shotgun sequence.
ACCESSION   DAPPKW010000153 DAPPKW010000000
VERSION     DAPPKW010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2238)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2238)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2238
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.153"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(160..2205)
                     /locus_tag="RPW04_001953"
     CDS             complement(160..2205)
                     /locus_tag="RPW04_001953"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296026.1"
                     /translation="MTAFDTVDGAAGNDTINISFGLNSNSNVTDLKTSDLNSALLGVT
                     NVEKLNIISEVKAADGGGLTINGYKSVSLNIVGETKIADTDATKLDIKASGNVTVTKA
                     EAVKDLSINAANSEVSIAANATKALENLTIKNASKLTATNAFDGDTLKSVTLSNVTLG
                     DTNAAAAFDFKGVSTLNFDNVVSAQTTDSKIAHITSSAETLNLNLSGKTATVALATNS
                     VTKVANINANADVNAFLITKANGDMNPGHADLQNDSFTTFIVKGNGKELTLNAGDLDL
                     VKDIDTTGFSGNAKVSFGDTDSADGSQLSVKTGAGNDTLNLEAKKLKAGSLIDGGEGN
                     DTIIMKASALADAATLGMIKNIENVTVSDALSANTDVSASSFVNIGLLADKTDAPFEL
                     TVNKNQTIDIQSKEMAKSQILTIKMNDMSGSDDTVNIVLNAKAIINQRDKNVAAGAAT
                     KGLKIDDGIESVNITSVAKDNTTANTLWIDTSSDGTKGANKIVISGDGDITVAASTVA
                     TGLKSIKDLDASALTGKLTFDASVNKLASGATIKGGSGDDSITVKGGLANLTLGEGSD
                     TVTLKKGGTSIDYITINDFSKDDKIVLDGTDFASAKAIEKLTLANTTGFSDYVNQAAS
                     GDGNTNPIVKYFHYQNDTYIVVDKGAGATLANTDTVIKLAGIHELTGTQNITIADSQ"
BASE COUNT          606 a          467 c          359 g          806 t
ORIGIN      
        1 gtcgcatcga aaaacaaaaa aaactaagtc gttgtatatt taaatataca tatgttaaac
       61 ttaattcatt catacaacaa atcattgcta atatatttac gacaacaaag ctcaaagcct
      121 agctaattaa ttctagtagg ctttgaaagt tagctctact tattgagagt ctgcaattgt
      181 gatattttgt gttccagtta gctcgtggat gccagctagc ttaatcactg tatcagtgtt
      241 tgccaaagta gctcctgctc ccttatcaac tactatatag gtatcgtttt gataatggaa
      301 gtatttaact ataggatttg tatttccatc accgctcgct gcttgattta cgtaatcact
      361 aaatcctgtt gtatttgcca aagtaagttt ttctatggct tttgcactag caaaatcggt
      421 accgtctaag actattttat catctttgct aaagtcatta attgttatat agtctataga
      481 tgtgcctcct ttttttagtg taacggtatc agatccttct ccaagagtta aattagctaa
      541 tccgccttta acagttatac tatcatctcc actaccgcct ttaatcgtag ctccgctagc
      601 taatttattt acacttgcat cgaatgtaag cttacctgtc aatgcgctag cgtctaaatc
      661 ttttatgctt ttaagcccag ttgccacagt agaggctgca actgtaatat ctccatcgcc
      721 gcttataact attttattag caccttttgt tccgtcgcta cttgtatcaa tccacaaagt
      781 atttgcagta gtattatcct tagctactga agttatatta acagactcta taccgtcatc
      841 tatctttaag cctttagttg cagctccggc tgctacgttt ttgtctctct gatttataat
      901 agccttagca ttaagaacta tatttacagt atcatcacta ccagacatat cgttcatctt
      961 aatagtaaga atttgtgatt ttgccatctc ttttgattga atatctattg tttgattctt
     1021 atttactgtt agctcaaatg gcgcgtctgt cttatcagcc aataacccaa tattcacaaa
     1081 tgagctcgcg cttacgtctg tatttgcact taaagcatcg ctgacagtca cgttttctat
     1141 attcttaatc atacctaaag tagcagcgtc ggctaatgcg ctagctttca tgataattgt
     1201 atcatttcct tcaccgccat ctatcagcga tcctgctttt agctttttag cttctaaatt
     1261 taaagtatca tttcctgcgc ctgttttaac gctaagttgt gatccatcgg ctgagtcagt
     1321 gtctccgaaa ctcactttgg catttccgct aaatcctgta gtatctatat cttttaccaa
     1381 atcaagatct ccggcattta aagtaagctc cttaccatta ccttttacga taaacgtagt
     1441 aaatgaatcg ttttgtaaat cagcatgacc tggattcata tcaccgttag ctttagtaat
     1501 taagaaggcg ttaacatctg cgtttgcatt tatatttgct actttagtta cgctattagt
     1561 tgccaaagca acagtagcag tttttccgct taagtttaaa tttaaagtct cagcactaga
     1621 tgtaatgtga gctattttac tatctgtagt ttgagccgat acgacattat caaaatttaa
     1681 agtagatacg cctttgaaat caaatgcggc agcagcgtta gtatcgccta aagttacatt
     1741 acttaaagtt acgctcttta aagtatctcc atcgaatgca tttgtagccg ttagcttact
     1801 agcatttttt atagttaggt tttctaaggc tttagttgcg tttgccgcta tgcttacttc
     1861 actgtttgct gcatttatgc ttaggtcttt cacggcctcg gctttagtca cggttacatt
     1921 accgctagct tttatatcaa gcttagtagc gtcagtatct gctatcttag tctcaccgac
     1981 tatatttaac gaaacactct tatatccgtt tatagtaaga ccgccgccgt ctgcagcttt
     2041 aacctcagat ataatattta atttctcaac attagttacg ccaagaagag ctgagtttaa
     2101 atcgctagtt tttagatcgg tcacgttcga gttgctattt agaccaaatg atatatttat
     2161 agtgtcgttg cccgctgcgc cgtctacggt gtcaaacgcg gtcaatgtcg atttattaat
     2221 acctgttccc aaataaac
//
LOCUS       DAPPKW010000154         2040 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.154, whole genome shotgun sequence.
ACCESSION   DAPPKW010000154 DAPPKW010000000
VERSION     DAPPKW010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2040)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2040)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2040
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.154"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            244..558
                     /locus_tag="RPW04_001954"
     CDS             244..558
                     /locus_tag="RPW04_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296027.1"
                     /translation="MKKILKNFKKLYWLLACSPVFLFGAGGQNVLKTLEQNVNQQITE
                     AGGSFASVLNTIVLVIGILWIIVLMLGALFNVEAIKNHIKFVIIASIVLGVTYGLTAA
                     AM"
     gene            572..814
                     /locus_tag="RPW04_001955"
     CDS             572..814
                     /locus_tag="RPW04_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296028.1"
                     /translation="MVVTDCYMDLTKKTKIMGLTTTSLLIIFVVGFVAWFILILYSLA
                     VVAVLYCFFFVLEFFDEDIYEIIGSKMKISQNKFYA"
     gene            823..>2040
                     /locus_tag="RPW04_001956"
     CDS             823..>2040
                     /locus_tag="RPW04_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDX6296029.1"
                     /translation="MARGLIDVFKDWKQNKQNAKMKKELGIETRNAKNESQNNDVLSK
                     INKINQKVDTILTLSEPQIYTLAKENNIACKYGDNAIITKDGNISIAVELKGVSYAGI
                     SLDNEMDYLLSRVMFFTTLKDDVEINLIIKKTKEKSKGYTQREINPYAKDIIEKWEIN
                     QDIYAIRYLLIISTTTKNITGMLENFKTKMTSEQSEESSESTNLKQKLELLNNTFLNI
                     KNYLSTYQPRQMSGDEIINFYATYSNAQETNLSYTNELITDCYISSYVEFKKDYIEFY
                     RNDGTTKYARFISVKAYETEQIKSVITSNLIKSNNEFMVMVYFKAYEKRKAIKKIKDT
                     RVFSVELVKQELDHLMELIQADRENLVETSFSIYCLADDLKELDVRSNELKNILENQG
                     LNVVRETINQKALY"
BASE COUNT          846 a          284 c          321 g          589 t
ORIGIN      
        1 attaaatatt tttacgaaat tttaaaaaac gaaattttgt aaagcaaaaa ttttataaaa
       61 aattatcgag agatacgaaa aaatcattaa tacaaaaaat caaaaaagta aatgaaattt
      121 ttaaaaaaat cttacgactt attttttagc ccctaaaaat cgtgctttaa aaaaatcatt
      181 ttacaaaatg tccttttttt gattttgata tagttctaaa taaattcata aaaaggtaat
      241 acaatgaaaa aaatcttaaa aaacttcaaa aaactttact ggctcttagc atgttcgcca
      301 gtctttttat tcggagctgg tggtcaaaat gttttaaaaa cattggagca aaatgtcaat
      361 cagcaaatca ctgaagctgg cggaagcttt gctagtgttt taaatactat tgtgttagtc
      421 attggtatcc tttggataat agttttaatg cttggtgcat tgtttaacgt tgaagcgatt
      481 aaaaatcata ttaaatttgt aatcatcgct tcaattgttc taggtgtaac atacggactt
      541 actgcagccg caatgtaaaa aggatagaac aatggtagta actgactgtt atatggattt
      601 aaccaaaaaa accaaaatca tgggattaac cacgacaagc cttttaataa tatttgtagt
      661 aggttttgtt gcgtggttta ttttgatttt atattcattg gcagtcgttg cagttttata
      721 ttgcttcttt tttgttttag aatttttcga tgaagatata tatgaaatca tcggatcgaa
      781 aatgaaaatt tcgcaaaata aattttatgc ataaggtaaa aaatggctcg tggattaatt
      841 gatgtattta aagattggaa acagaacaag caaaatgcaa agatgaaaaa agagcttggc
      901 attgagacaa gaaacgcaaa aaatgaatca caaaataacg atgtactatc gaaaataaat
      961 aaaatcaacc aaaaagtaga tacaatctta accttaagtg agccacaaat ttatacacta
     1021 gcaaaagaaa ataatattgc atgtaaatac ggcgacaatg caatcatcac aaaagatggc
     1081 aatattagta ttgctgtaga gttaaaaggg gtgagctatg caggaattag cctagataat
     1141 gaaatggatt atcttttaag ccgtgttatg ttttttacga cattaaaaga tgatgtagag
     1201 ataaatctaa ttatcaaaaa gacaaaggaa aaatccaaag gctatacaca aagagaaatt
     1261 aatccttacg caaaagatat catagaaaaa tgggaaatca atcaagacat atatgccata
     1321 agatatcttt tgatcatctc gacgactacc aaaaatataa ctggaatgct tgaaaacttt
     1381 aaaacaaaaa tgacaagtga acagagcgaa gaaagtagcg agagcacaaa tttaaaacaa
     1441 aaactggagc ttttaaataa tacattttta aatatcaaaa actacttatc aacatatcag
     1501 ccacgacaaa tgagtggcga tgaaattata aatttttacg ccacatattc aaatgcacaa
     1561 gagacaaatc tatcatatac aaacgaacta atcacagatt gctatataag ctcatacgtt
     1621 gaatttaaaa aggactatat agaattttac cgaaacgatg gcacaacaaa atacgcaaga
     1681 tttatcagcg tcaaagccta tgaaactgag cagataaaat ctgtcatcac atcaaattta
     1741 atcaaaagca ataacgaatt tatggtaatg gtttatttta aagcctacga aaaacgcaaa
     1801 gccattaaaa aaataaaaga tacaagagta ttttcagtgg aattagtcaa acaagaacta
     1861 gaccatttaa tggagctaat ccaagccgat agagaaaact tagtagagac aagcttttca
     1921 atttactgcc tagccgatga tttaaaggag ctagatgtcc gctcaaatga gctaaaaaat
     1981 attctcgaaa atcaagggct aaatgtagta agagaaacaa ttaatcaaaa agccttatat
//
LOCUS       DAPPKW010000155         2008 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.155, whole genome shotgun sequence.
ACCESSION   DAPPKW010000155 DAPPKW010000000
VERSION     DAPPKW010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 2008)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2008)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2008
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.155"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            38..565
                     /locus_tag="RPW04_001957"
     CDS             38..565
                     /locus_tag="RPW04_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008350145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HDX6296030.1"
                     /translation="MEKFISYLLIKFSNHICIRYRRWIAMHYPNKDVRLHFWKISRVQ
                     IGDNSEAAMGMHVIDDSDNEKCQLIIGKNVSIAAGATFVCCSEPSFSVNLKEISYVKE
                     NLIKKSTITIGDDTWIGANTTILPGVKIGKFCIIGAGSIVTKDVDDFSIAVGVPAKVI
                     RKLKLTSSNKMYNYE"
     gene            592..1574
                     /locus_tag="RPW04_001958"
                     /pseudo
     CDS             592..1574
                     /locus_tag="RPW04_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850654.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
     gene            1668..>2008
                     /locus_tag="RPW04_001959"
     CDS             1668..>2008
                     /locus_tag="RPW04_001959"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296031.1"
                     /translation="MKYYIYPNGKVGQDIKRILEKTGFDKEFIEVNDEFVKNNHKEMQ
                     DGIVLISSQKYYFDIAKKCTKFDLKYTNGIKFAADILNKFILTISPMNKNIGVILAGP
                     AGNKHRGSVLN"
BASE COUNT          875 a          238 c          330 g          565 t
ORIGIN      
        1 actatagctc gaatttgtca aaaaaaggta tgatataatg gaaaaattta tatcatacct
       61 tttaataaaa tttagcaacc atatatgtat acgatataga agatggatag caatgcatta
      121 tcctaacaaa gatgtaaggt tgcatttttg gaaaatttca agagtgcaaa taggcgacaa
      181 ctcagaagcg gcaatgggaa tgcatgttat agacgactct gataatgaaa aatgccaact
      241 cataataggc aaaaatgtat caatagctgc tggagcaacg tttgtgtgct gcagcgaacc
      301 tagcttttct gtaaatttaa aagaaatttc atatgtaaaa gaaaatttga ttaaaaaatc
      361 aactatcaca atcggggatg acacatggat aggagctaat accactatat tacccggagt
      421 aaaaataggc aaattttgca ttataggagc aggatctata gtcacaaaag atgtagatga
      481 tttttctata gcagtaggag ttccggcaaa agtcattaga aaattaaagt taacatcaag
      541 taataaaatg tataattatg aataatacac atacaggaga tatctaaata tatgaaaata
      601 gacaataaag atttagatgc aaaaaaagaa attatcaaaa acagattttc actaaaaaat
      661 ttcaatgatt atatcaaatt tccaaaatat tttgaggtag aaaccgtcaa tgcatgtaat
      721 gctcattgta aaatgtgcag tatagaacat tgggaaggat atcgagataa aaataaattt
      781 aaaagaatta tgagtgatga tacatggagt aaatttgtac aatacataac accatactca
      841 caatggatag aaaaaatttc tttaactaaa ctgggagaac ctttgttgga ttttaaaatc
      901 caagatagaa ttaaagatct aaaaaagtta aatataaaaa atgtaagtat aactacaaat
      961 gcttctcttc taaatgaaaa catatcgaaa aaacttttag attctgggtt agatgaatta
     1021 aacgtatcca tagacgggct aagcaaagaa gtatatgaag gcataagaat aggtcttaaa
     1081 catgaaaatg tatataaaaa cactattcaa tttataaata tgagagatgg ggggggtatc
     1141 gcacatctat aagagtaagg ttaactcaac aagagcaaaa tcttcatgaa attgacgatt
     1201 ggataaattt ttggacaagc aaaacagata aaaatgataa agtatataca atgcctctgc
     1261 ttacatgggg aaatagacta tttaatgaaa cacaatcaaa aatagagttt atgagcaaca
     1321 aagcatgcag ctatctattt tccagtatgt cgatagacta tgatggaaga gtcgtattgt
     1381 gttgttctga tttcaattct atattcgatt taggcaatat aaatgagaaa acgataaatg
     1441 atatctggac tagcaaaaaa tatgaaacaa ttagagaaat gcatttaaat aatgaaagaa
     1501 ataaaataaa tatatgcaaa ggatgcatga tttgggacaa gagctacaca tcaaataata
     1561 caaataaaaa gtaaaattaa aaaatatttt atatagataa aaaactttac ataatttgat
     1621 ataattaaaa ctatatatac aattttatgt taaacaaagg tagatacttg aaatattaca
     1681 tatacccaaa cggtaaagtt ggacaagata taaaaagaat acttgaaaaa acaggttttg
     1741 ataaagaatt tatagaagta aatgatgaat ttgtaaagaa caaccataaa gaaatgcaag
     1801 atggaatagt tctcatatca tcgcaaaaat actactttga tatagcaaaa aaatgcacta
     1861 aatttgattt gaaatataca aatggaataa aatttgcggc tgatatttta aataaattta
     1921 tacttacaat tagccctatg aataaaaata tcggggtaat attagcaggt cctgccggaa
     1981 ataaacaccg aggaagcgta cttaataa
//
LOCUS       DAPPKW010000156         1996 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.156, whole genome shotgun sequence.
ACCESSION   DAPPKW010000156 DAPPKW010000000
VERSION     DAPPKW010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.156"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..1886
                     /locus_tag="RPW04_001960"
     CDS             <1..1886
                     /locus_tag="RPW04_001960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HDX6296032.1"
                     /translation="EVGNTVTKGSININLNAMSGDAKLGAANSETDNLSISVNGVEGK
                     FETQALKAAASTTVSLTNIKGASTIASLNGATTSLSIENTGDVTISNASSALEGDFSI
                     NANNANGLTTGVITANKGAISINANGVSAITVGNLSAKSSITLNAGDASTSVKAGDIA
                     ADSVNVDLSKVLGTTTVGKIKSDNIIYKASELSADTASKIALASKGNIQNFKAEVTGS
                     LGDDKIELTTAATTSSVTLSGDLGVGNDTVDINETSAVDALKTVNLSGLTNYATSTTK
                     LKAAASDTLTFNGGSGDDSVEVSGTAIASLKVIGDFGGGNLDKLTLGTNATAITGADS
                     AVIIDITKVTNVDSTEINFTNTATDMSDKALTINGSESNDQVTLKLAANTTKVKVDGD
                     LGDGNDTFVFDIGAATATSITDIDLIGLKGVEVGLHGADAATAFDFSTYTGLTTFNAT
                     TGADNIKLGKLTESAVVNLGSGDDKIETGAFTASKTLTIDSGIGSDYINISASKVATA
                     ADTKEMVIISDVAANLKGDTIKFGTTIANAGSITAADQSWDTDLKTTLKNAIATADAN
                     KLYVVNITDSAAGDSKGTYLFYNGNADQVISVDDIIVKLSGVSTTDNLTFTADSDGTL
                     TIA"
BASE COUNT          711 a          323 c          402 g          560 t
ORIGIN      
        1 tagaagtagg aaatacggtt actaaaggct ctataaatat caacctaaac gctatgagcg
       61 gagacgcaaa actaggcgct gctaattcag aaacagataa tctaagtata agcgtaaatg
      121 gcgtagaagg caaatttgaa acacaagctt taaaagctgc agcgtctact actgtatctc
      181 ttacaaacat aaaaggtgct tcaactatag cttctttaaa tggagccact actagtttat
      241 ctatagaaaa cactggagac gtgactatat ctaatgcttc ttctgcttta gaaggtgatt
      301 ttagtataaa tgcaaataat gcaaacggat taacaaccgg cgttataaca gctaataaag
      361 gagctatatc tataaatgca aatggtgtta gtgctataac agttggaaac ctaagcgcca
      421 aatcatcgat aaccctaaac gcaggagacg caagtacttc ggtaaaagca ggcgatatag
      481 ctgcagatag cgtaaatgta gatctttcta aagtattagg tactacaaca gtaggtaaaa
      541 taaaatctga taatataata tataaagctt cagagctttc agctgatact gcaagtaaga
      601 tagctttagc gtcaaaaggt aatattcaaa atttcaaagc agaagttact ggtagtttag
      661 gcgatgataa aatagaatta actaccgcag ctactacttc atcagtaact ctatcaggcg
      721 atttgggtgt aggaaacgat actgtagata taaatgaaac ttcagcagta gacgctctta
      781 aaacagtaaa tttaagtggc ttaactaatt acgctacttc tacaacaaaa ctaaaagcag
      841 ctgcgagcga tactcttacg tttaatggcg gaagcggtga tgatagcgta gaagtatcag
      901 gaactgctat agcatctctt aaggtaattg gtgattttgg tggagggaac ttagataagc
      961 ttactttagg tacaaatgct actgctataa ccggagccga ttctgcagta attatagata
     1021 tcactaaagt aactaatgta gatagtaccg agatcaactt tacaaacact gcaacagata
     1081 tgagtgataa agctcttact ataaatggta gtgagtcaaa tgaccaagtt actcttaaac
     1141 tagctgctaa tactactaag gttaaggtag atggggattt gggcgatgga aacgatacgt
     1201 ttgtatttga tataggcgct gctactgcta caagtataac agatatcgac cttataggat
     1261 taaaaggcgt tgaagtaggt cttcacggtg ctgacgcagc tacggcgttt gattttagca
     1321 catataccgg cttaactacg tttaatgcaa caacaggcgc ggataatatt aaattaggaa
     1381 aattaactga aagtgcagtc gtaaatcttg gttcaggaga tgacaagata gaaacaggcg
     1441 catttactgc aagtaagact cttacaatcg actctggaat cggtagcgat tatataaata
     1501 taagtgcgtc taaagttgct acggcagctg ataccaaaga aatggtaatt atatcagacg
     1561 tagctgcaaa tcttaaaggt gacactatca aatttggaac tacaatagca aatgccggaa
     1621 gtatcacagc tgctgatcaa tcatgggata cagatttaaa aactactttg aaaaatgcaa
     1681 ttgctacagc cgatgcaaat aagctttacg ttgtaaatat tactgattcg gctgctggag
     1741 atagcaaagg aacatatttg ttttataacg gaaatgccga tcaagtaatc agtgtagatg
     1801 atataatcgt taaattatct ggagtatcaa ctaccgataa cctaacattt acagcagata
     1861 gcgatggtac attaaccata gcttaagtat ttattgtagt tattgcgact aaatttttgt
     1921 agattgtttt aacccaaata gtctgagttt agcttggatt gttttaaatt tatatagtat
     1981 aacaacgatg ataaat
//
LOCUS       DAPPKW010000157         1980 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.157, whole genome shotgun sequence.
ACCESSION   DAPPKW010000157 DAPPKW010000000
VERSION     DAPPKW010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1980)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1980)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.157"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..820
                     /locus_tag="RPW04_001961"
     CDS             <1..820
                     /locus_tag="RPW04_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HDX6296033.1"
                     /translation="VIFGLVFFILLITYIFIIRKIKPLRKLKRQIDKFASGNLNIKNV
                     STGNDEISEVADAFYNAVMQIKSLNQSRQLFLRNIMHELKTPITKGRITAEMIEKTKN
                     QERLINVFERLESLINEFAALERVTSGIAIENSKLYKVVDIIDEAADIAMAEKSLITI
                     NAIDDVSINGDFKLLSIAFKNMIDNGIKYSDDKHINITITNKNIKFITKGDKLEQELN
                     YYIEPFTQGSNAKKSFGLGLYIVDNILKSHNLNLEYCYKNGLNIFIFNGLKPQI"
     gene            complement(827..>1980)
                     /locus_tag="RPW04_001962"
     CDS             complement(827..>1980)
                     /locus_tag="RPW04_001962"
                     /inference="COORDINATES: protein motif:HMM:NF015714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HDX6296034.1"
                     /translation="DAKYSFINAKIIQNYEKQGKNNSYFILKLKSNEFTFYTRTKNKI
                     DFTDARVGVISKNLKFKEYLKNSFFLPNFKIEPQKSSLSFTDNVQNSIENQHENPKLK
                     ELYSALYIASPINKDLRANVTNWGIAHIIAISGFHLSLIFAFIFFIVKPVVRPLQSRY
                     FPYVNINFHLSIFIFILMGFYLYILDFTPSFLRSYIMGVFGFLLLSRGLSIFKFGNLC
                     LTILIAVAFSPKLLFSIGFYFSCLGVFFIFLYIHHFGDKNDLKSRLKIALHTLYLEIF
                     VFGAMNIPVYYFFTSASLYQLSVIPLAYVFVVFYPLSIILHFFNLGGIFDSQMLAFLE
                     FANKQSDIFIPFWIFVFFNFLLIPAIKFKSIAIFLSAGGMVLFIFSLIF"
BASE COUNT          844 a          283 c          264 g          589 t
ORIGIN      
        1 agtaattttt gggcttgtat tttttatact tcttataaca tatatattta taataagaaa
       61 aataaaacct ttaagaaaat taaagcgtca aatagataaa tttgcaagtg gaaatctaaa
      121 tataaaaaac gtaagtacag gaaatgacga aatatctgaa gtcgcagatg cattttataa
      181 tgcagtaatg cagataaaat ctttaaatca atcgcgccag ttatttttaa gaaacattat
      241 gcacgaatta aaaacaccta tcacaaaagg caggataaca gccgaaatga tagaaaaaac
      301 taaaaatcaa gagaggctta taaacgtatt tgaacgccta gaaagtctta taaacgaatt
      361 tgcagcatta gaaagagtaa catctggaat agctatagaa aactcaaaac tatataaagt
      421 agtagatatc atagatgaag ccgcagatat agcaatggcg gaaaaatcat taatcacgat
      481 aaatgccata gacgatgtga gcataaacgg tgattttaaa ctattatcta tcgcttttaa
      541 aaatatgata gataacggta taaagtattc agacgataaa catataaata taactattac
      601 aaataaaaat atcaaattta taaccaaagg cgacaaactt gaacaagagc ttaactatta
      661 tatagagcca tttacgcaag gttcaaacgc taaaaaaagc tttggtcttg gtctttatat
      721 cgtagataat atattaaaaa gtcacaatct aaatttagag tactgctata aaaacggatt
      781 aaatatattt atatttaacg gattgaagcc tcaaatttaa tacaaattaa aatatcaatg
      841 aaaagataaa taaaaccata cctccagcag ataaaaatat ggctatactt ttaaatttaa
      901 tagcaggaat tagtaaaaaa ttaaaaaata caaatatcca aaacggtatg aaaatatcac
      961 tttgtttatt agcaaattct aaaaaagcaa gcatttgcga atcgaaaatt cctccgagat
     1021 taaaaaaatg aagaattata ctaagaggat aaaaaacaac aaaaacataa gccaaaggta
     1081 taacgcttaa ttggtacaaa cttgccgaag taaaaaaata atacaccgga atattcatcg
     1141 caccaaatac gaaaatctcc aaatataaag tatgcaaggc tatcttgagt ctacttttta
     1201 gatcgttttt atctccaaaa tgatggatat ataaaaatat aaaaaataca cctaaacaag
     1261 aaaaataaaa tccgatcgaa aacagaagtt tcggactaaa agcaacagca atcaaaatag
     1321 tcaaacacaa atttccaaat ttaaatatac ttagtcctct gctaagaagt aaaaatccaa
     1381 aaacccccat tatatatgaa cgcaaaaaac taggagtaaa atccaaaata taaagataaa
     1441 atcccattaa aataaatata aaaatactta gatgaaaatt tatatttaca tatggaaaat
     1501 atctactttg cagcggtcta acaaccggct ttacgataaa aaatataaaa gcaaatataa
     1561 gactaagatg aaatccgcta atagctataa tatgagctat accccaattt gtcacgttcg
     1621 ctcttagatc tttatttata ggtgaagcaa tataaagagc gctgtaaagc tcttttaatt
     1681 taggattttc atgctgattt tctatgctat tttgaacatt atccgtgaag cttagactgc
     1741 ttttttgagg ttcgatctta aaattaggta agaaaaaact attctttaaa tactctttaa
     1801 atttaagatt tttactgatt acgccgactc ttgcatctgt aaaatcgatc ttgttttttg
     1861 ttcttgtata aaacgtaaac tcgttagatt tgagctttaa aataaaataa ctgttatttt
     1921 ttccctgttt ttcataattt tgaataattt ttgcatttat aaacgaatat ttagcatctc
//
LOCUS       DAPPKW010000158         1950 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.158, whole genome shotgun sequence.
ACCESSION   DAPPKW010000158 DAPPKW010000000
VERSION     DAPPKW010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1950)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1950)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1950
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.158"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            188..1489
                     /locus_tag="RPW04_001963"
     CDS             188..1489
                     /locus_tag="RPW04_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002950204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDX6296035.1"
                     /translation="MIILAAVFIFLNGFFVLSEFCIVKVRKSRLEELVKDRVPNAKLA
                     YKMSNSLDTYLSATQLGITLSSLALGWIGEPAVANVIVSPLKNYFGIEGVAVHTISFI
                     IAFSIITFLHVVLGELVPKSVAIAKSEKAVLIIARPLYFFWIIFFPIIKMFDFMAGMF
                     LKLIGIKPAKDSELAHSEEEIKIIVGESLKGGVLDSMESEIIKNAVDFSDTVAKEIMT
                     PRKDVICLNKQKSFEENMQVIQNSKFTRFPYIDGSKDVVLGMIHIRDILQNDLIGQNT
                     NLDKIVRKFIIVPENSSISKILVMMNKDRISAALVVDEYGGTAGLLTMEDIIEEIVGD
                     INDEHDDKNQSYKKISEHSYEFNGRFDIESVEEIMEISFDEETEQLTIGGYVFNLFER
                     LPVVGDTIEDENCIYEVLKMDGTSILTVKATLKSEDSNNFI"
     gene            complement(1486..>1950)
                     /locus_tag="RPW04_001964"
     CDS             complement(1486..>1950)
                     /locus_tag="RPW04_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002860613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine permease"
                     /protein_id="HDX6296036.1"
                     /translation="TLPCNEFLDEYVLNYEIYKLANISSNAYLFWKNGVCASYQNSKA
                     VFLHKKSIPVKYQIYLKSCSNLNGFVLSSAFCSFTGLSSSHLTKSNGSNLYDKLEIRN
                     IAKFKFVNLKKLYDDLGLDYKTHIYIEKCKYFSPTPLEKRIKLTDTLCLGYY"
BASE COUNT          683 a          258 c          350 g          659 t
ORIGIN      
        1 atatagttta aatttaaatt tataattgtt taaatttgaa acatatcgta aaaataacac
       61 acatttactt tttataagtt tgaaatttga attatgaatt gtttaatata tttttgtaaa
      121 aaaatttgat ataatatgaa aaattttttc taaataagga tattaattgg acacggaacc
      181 cattcttatg attatacttg ccgctgtttt tatattttta aacggctttt tcgttttatc
      241 tgaattttgt attgttaaag tcagaaagtc aaggcttgaa gagcttgtaa aagacagagt
      301 cccaaatgca aaactcgcct acaaaatgtc aaattcacta gatacttatc ttagcgctac
      361 tcaacttggt attaccctta gttcgcttgc tcttggttgg ataggtgagc cggcggttgc
      421 aaatgttata gtatctcctc ttaaaaatta cttcggtata gaaggagtag ctgttcatac
      481 gatatcattc attatagctt ttagcattat tacttttttg catgtcgtgt taggtgagct
      541 tgtaccaaag tctgtagcta tagcaaaatc agaaaaagca gttcttatta tagctagacc
      601 gctatatttc ttttggatta tattttttcc tattataaag atgtttgatt ttatggctgg
      661 aatgttttta aagctcatag gtataaaacc agccaaagat agtgagcttg ctcactctga
      721 agaggagata aaaattatag tcggagagag tttaaaaggc ggcgttttag atagcatgga
      781 aagtgaaatt atcaaaaatg cggtagattt cagcgatacg gttgcaaaag agatcatgac
      841 tcctagaaaa gatgttatat gtctaaataa gcaaaagagt tttgaagaaa atatgcaagt
      901 tatccaaaat agtaaattta ctagatttcc atatatagat gggagcaagg acgttgtttt
      961 aggtatgata catataagag atattctcca aaatgattta atcgggcaaa acacaaatct
     1021 tgataaaatc gtacgtaaat ttataattgt tcctgaaaat agctctatct caaagatatt
     1081 ggtaatgatg aataaagata gaatttcagc agctctcgtc gtcgacgagt acggtggaac
     1141 cgcaggactt cttactatgg aagatatcat agaagagata gtaggtgaca taaacgatga
     1201 gcacgacgat aaaaatcaaa gttataaaaa aatctctgag catagttatg agtttaacgg
     1261 tagatttgat atagaaagcg ttgaagagat tatggagata agctttgatg aagaaacaga
     1321 acagcttact ataggcggat atgtatttaa tctttttgaa agacttccgg tggtcggtga
     1381 tacgattgaa gatgaaaact gtatttatga agttctgaaa atggatggaa ctagcatatt
     1441 aacagtaaaa gcaactctta aatccgaaga ttctaacaat tttatttaat aatacccaag
     1501 gcagagcgta tcagtaagtt tgatacgctt ttctaacgga gtaggcgaaa aatacttgca
     1561 cttttctata taaatatgcg ttttataatc aagccccaag tcatcatata gctttttcag
     1621 atttacaaat ttaaatttag ctatatttct aatctctaat ttatcatata aatttgaacc
     1681 gttcgatttt gttaagtgag aactagaaag tccggtaaat gagcaaaatg cactagaaag
     1741 aacaaatccg tttaaatttg agcagctttt taaataaatt tggtatttga ctggaattga
     1801 ttttttgtgt aaaaataccg cttttgaatt ttgatatgat gcgcaaactc cgtttttcca
     1861 aaatagataa gcatttgaac tgatgtttgc taatttatat atttcgtagt taagaacata
     1921 ttcatctaaa aattcattac agggcagtgt
//
LOCUS       DAPPKW010000159         1933 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.159, whole genome shotgun sequence.
ACCESSION   DAPPKW010000159 DAPPKW010000000
VERSION     DAPPKW010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1933)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1933)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1933
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.159"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            405..1052
                     /locus_tag="RPW04_001965"
     CDS             405..1052
                     /locus_tag="RPW04_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009495782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDX6296037.1"
                     /translation="MIVSICNEKGGSGKSTLATNIAINQSLSKNELPLLIDTDPQKSI
                     ATFLNIRNEENNPKVFDFTYKYGENLKEFLQNYNSNKDVIIDTGGRDSREMRIAIALS
                     DMVIIPTIPSQFDVSVLDKMVNIIKMAKEQNEKLVAYIVINRASTNPFLYKKIESLRN
                     FIEELEQDYIKLSQTIIYERERYKVATQLGLGVVEMKDGNKAEQEIRDLCNEICT"
     gene            1289..1855
                     /locus_tag="RPW04_001966"
     CDS             1289..1855
                     /locus_tag="RPW04_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009495784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296038.1"
                     /translation="MNFKKTTNSIENLDAFIDGADTQKDTSIDKKVSVVTKISKELSN
                     KIKLKYPKMPLTKYIEQALMVKIPHINEDILLTICQQAEWFNTSIADFVRYKMGLMEA
                     PEPNELNKNEEKLENKILYVSNDNKKIIKRNAENIGLSLYRYSEIKIKVTYELKDIFT
                     FEELMQFKAEAINYDLELDEYIAMRIRG"
BASE COUNT          834 a          226 c          304 g          569 t
ORIGIN      
        1 aataatttat tttttaaaaa agccgagcga aatagatgca attattaacg caagtccaat
       61 atttataaca ttatctgtta tttgctatat agtttttaat attatgttgt atacaatatt
      121 aaaaatcagg tttttaatat cgcaaaaata acttactttt aacttacaag caactcatta
      181 aaatagccgt tttttgaact ttaagcatta cgtaagtttt aatacataaa aaattaatct
      241 tatatatgtt ttttattgtt ttaatatatc taaattatac tttaaaatat atttttatta
      301 tttatatttt atatgtttat ttatattttt attatttgtt ttttatatgt ttttaaacta
      361 ataaatgata taattcataa aatttcaata cgcaaggaaa cgcaatgatt gtatcaattt
      421 gcaatgaaaa agggggaagc gggaaaagca ctctagcaac aaatattgcc attaatcaaa
      481 gtctatctaa aaacgaacta ccgctattaa tagatacgga tccacaaaaa tcaatagcta
      541 catttttaaa cataagaaat gaagaaaata acccaaaggt ttttgatttt acatataaat
      601 acggtgaaaa tttaaaggaa tttttacaaa attataatag caataaagac gtgataattg
      661 atacaggcgg aagagatagt agagagatga gaatagctat agctttaagc gatatggtta
      721 taattccaac aatcccaagt caatttgacg tcagcgtatt agataaaatg gtgaatataa
      781 tcaagatggc aaaggagcaa aacgaaaaac tcgtagccta tatagtaatc aatagagcct
      841 cgacaaatcc atttttatat aaaaaaattg aaagtctaag aaactttata gaagagttag
      901 aacaagatta tataaaactg tctcaaacaa tcatatacga gagagaaaga tataaagtag
      961 caacccaact aggtcttggt gtagttgaga tgaaagacgg caacaaagct gaacaggaga
     1021 taagagattt atgtaatgag atttgtacct gatatataaa ataacaaaag aggagcggta
     1081 atggcaactg tagaagtaac ttcagtagca ctgattttgc taacatattt aatgctttgg
     1141 gattaagtgg aggatacgtt cacaaagata aaataagaga acattgcttt gagatgagtg
     1201 atggagtata taaaatggat agagcactat cacgatttat cacaagcatc ttagtaaaaa
     1261 attaaaaata aaaaaaagga taataaagat gaattttaaa aaaactacaa attcaattga
     1321 aaatttagat gcgtttatag atggggcaga tacacaaaag gatacttcaa tagataaaaa
     1381 agtctcagtt gttacaaaaa tatctaaaga gttaagcaat aaaattaaac taaaatatcc
     1441 aaaaatgcca ttaacaaaat atatagaaca ggcattaatg gtaaaaattc cacatataaa
     1501 tgaagatata ctgctaacga tatgccaaca agcagaatgg tttaacacaa gcatagcgga
     1561 ctttgtgcga tataaaatgg gattaatgga ggcaccagag ccaaatgagc taaataaaaa
     1621 tgaagaaaaa cttgaaaata aaattttata tgttagcaat gataataaga aaattataaa
     1681 aagaaatgca gagaatatag gcttaagcct atataggtat tcagaaatta aaattaaggt
     1741 aacctatgaa ctaaaagata tttttacatt tgaagaattg atgcaattta aagcagaagc
     1801 gataaattac gacctagaat tagatgaata tattgcaatg agaataaggg gatgatataa
     1861 acaataaaaa atgcatgaat ggtagaaaac actaaagctc ctacaaagta gggtgactct
     1921 ctacaccctc aaa
//
LOCUS       DAPPKW010000160         1908 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.160, whole genome shotgun sequence.
ACCESSION   DAPPKW010000160 DAPPKW010000000
VERSION     DAPPKW010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1908)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1908)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1908
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.160"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..1599
                     /locus_tag="RPW04_001967"
     CDS             <1..1599
                     /locus_tag="RPW04_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011991605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HDX6296039.1"
                     /translation="DWDKFFNDLEVIRAGRTKFIKSEHKNVSFGSGAGFSRTNINFSN
                     NNFTKQSVVKMISNLPKTSIKRCIDYALKNSLDGYAINEKGERVSSDEVMAEWKKDFG
                     KNLNSKDAWHLMFSVKESCSDERTLKALQDSVKSVLGSNFSGHKYAFVLHTHQNNPHV
                     HVVLNKRNNFTNKKIHFDSKEEIRDFFDDTRTNFAYALSARGLKYENKNFLQKDLKRE
                     FNNIKSSIKLEVDSYTAKDKINDYYDKMQDKNKEKYNATANRIEAMNDELEKLKKANK
                     ELLDLFLQYSKKRNKKAFKLAKELKESNKIIKQESLKILSEIKKANKLSYEATRLNEM
                     KLENYKDRSNALTLLENFNCNYNQLHPKNKGASKADFENHKKVKRAIAVLRDKKDDDA
                     IKYFDDSLVITRMLGSNESLFKLGKKLDIIDKNLYILEHSGLGIDEAKEYKKRLNDNK
                     EFLAEVCHKRFDYVAKKLLKNENLKGDEFLFKEYFKGVEILNLKPNERLLKIKKEADL
                     KVNKSRGVKVKTKHLDKNMDKGRV"
     gene            complement(1614..>1908)
                     /locus_tag="RPW04_001968"
     CDS             complement(1614..>1908)
                     /locus_tag="RPW04_001968"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296040.1"
                     /translation="VDFDIIKNTIENFLPNFKKNIQQILKEIKKELCKNLEKNVDYFT
                     KKQDILMPQAKTDLIKTIEKEYKKLKENNITLDKPYSDKIKNIIKENSKENQK"
BASE COUNT          731 a          209 c          316 g          652 t
ORIGIN      
        1 gattgggata aattttttaa tgatttagaa gttattagag ctgggcgaac taaatttatt
       61 aaatctgagc ataaaaatgt ttcttttgga agtggtgcag gattttctag aactaatata
      121 aatttttcaa ataataattt tactaaacaa tctgtagtta aaatgatttc aaatttacca
      181 aagacttcta ttaaaagatg tattgattat gctcttaaaa attcacttga tggctatgcc
      241 atcaatgaaa aaggggaaag agtaagcagt gatgaagtga tggctgagtg gaagaaagat
      301 tttggtaaaa atttaaattc aaaggatgcg tggcatttga tgttttcagt taaggagtcg
      361 tgcagtgatg agagaacttt aaaagctttg caagatagtg tcaagagtgt gcttggatca
      421 aattttagcg gacataaata tgcgtttgtg cttcatactc accaaaacaa tccccatgtg
      481 catgtggtct taaataaaag aaataatttt acaaataaaa aaattcactt tgatagcaag
      541 gaagagataa gggatttctt tgatgatact aggacgaatt ttgcttatgc tttgtctgct
      601 cgtgggctta aatatgaaaa taaaaacttt ttacaaaaag atttaaagcg tgaatttaat
      661 aatataaaat caagtattaa gcttgaagtt gatagctaca ctgcaaagga taaaattaac
      721 gattactacg ataaaatgca agataagaat aaagaaaaat ataatgccac agctaatcgc
      781 attgaagcta tgaatgatga gcttgaaaaa ctaaaaaaag ctaacaaaga gcttttagat
      841 ttgtttttac aatactctaa aaaaagaaat aaaaaagcct ttaaactcgc taaggaatta
      901 aaagaaagta ataaaatcat aaagcaagaa agccttaaaa ttctatctga aattaaaaag
      961 gctaataaat tatcttatga agctactaga cttaatgaga tgaaattaga aaattataaa
     1021 gatagatcaa atgcccttac attgcttgaa aattttaact gcaactataa ccagcttcat
     1081 cctaaaaata aaggagctag taaggctgac tttgaaaatc ataaaaaagt taaaagagct
     1141 attgcagtac ttcgtgataa aaaagatgac gatgctataa aatactttga tgatagttta
     1201 gttataactc gtatgctagg ctctaatgaa agccttttta aacttggtaa aaagcttgac
     1261 ataatagata aaaatttata tattttagag cactctggtc ttgggattga tgaagcaaaa
     1321 gagtataaaa aaaggcttaa tgacaacaaa gaatttcttg ctgaagtgtg tcataaaagg
     1381 tttgattatg tggctaaaaa acttttaaaa aatgaaaatt taaaagggga tgagttttta
     1441 tttaaagagt attttaaagg cgtagaaatt ctaaatttaa agccaaatga aaggctttta
     1501 aaaatcaaaa aagaagcaga tttaaaggtt aataagagcc gtggtgtaaa agtaaaaaca
     1561 aagcacttgg ataaaaatat ggataagggc agagtttagg tttctttccc tttttatttt
     1621 tgattttctt ttgaattttc cttaattata ttttttattt tatcgctata tggtttatcc
     1681 aatgtgatat tgttttcttt cagtttttta tactcttttt ctatggtttt tataaggtct
     1741 gtttttgcct gtggcattaa aatatcttgt tttttagtaa aataatcaac atttttctct
     1801 aaatttttac atagttcttt tttgatttct tttaaaattt gttgtatatt cttcttaaaa
     1861 tttggtaaaa aattttctat tgtatttttt ataatatcaa aatcaact
//
LOCUS       DAPPKW010000161         1860 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.161, whole genome shotgun sequence.
ACCESSION   DAPPKW010000161 DAPPKW010000000
VERSION     DAPPKW010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1860)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1860)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1860
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.161"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(63..>1860)
                     /locus_tag="RPW04_001969"
     CDS             complement(63..>1860)
                     /locus_tag="RPW04_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009651211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDX6296041.1"
                     /translation="SVDYYLLDSMPSFGGFSLGANDMSLIPYERVEVVKGANGLLAGA
                     GNPAASINFIRKRADSRDFKAVLKTSGGSYDKYGISGDVLSPLNKDGSIRGRLSFSHD
                     KSRSFMDYYKRKNDVIYTVIDADVGDNSWVSLAGFYQDLQRNGIRWGGMPAFYTNKSR
                     TNFSKNQIFSQPWTRWDIKTLDFYADYKYFFRNDAVFNYSYSFRRANTDSNLLYYGGN
                     LPTNNIGNIDGLSVYANKREENIHNIDSYLTLPYAAFDKNHEFVFGAMYNNYKKSADN
                     VSSYWNSKNTPAGLKFTSDTILNFNNLYINDPRFPYIDQNNPDKTIQKAIYMANKFQI
                     TDYAKFLVGGRMSYWKYSIEGGNANRNFTREITPYIGIVYDLNENYSLYASYTSIFKP
                     QNKKDINGKYLDPIEGKDYEVGIKAEYFGGALQTSFGLFKIEQDKLATAYEPDIKIPG
                     TSQSAYIASKGVLSKGFEIDVMGDINSDLSLSFGLTHFKAEDAKGMKYNTEAARTTAN
                     LFAKYTIQNLRIGGGILYKSKIYVGSGDRRITQNDYALVNLMLGYKINKNFDIQLNID
                     NLFDKRYYEGIGANKMVYGDPRLFNLTFSYNF"
BASE COUNT          592 a          332 c          260 g          676 t
ORIGIN      
        1 taaagtataa atttaataag gtttttacat taaaatttaa atataaaaac cttaaatttc
       61 aattagaaat tataactaaa agttaagtta aatagccttg gatcgccata aaccatctta
      121 tttgctccta taccttcata atatcgttta tcaaataaat tatcgatatt tagctggata
      181 tcaaagtttt tattgatttt atatccaagc attaaattta ctaaagcata gtcattttga
      241 gttattcgcc tatcaccgct acctacgtaa attttacttt tatataaaat acctccgcct
      301 attctaagat tttgaatggt atatttagca aataaattag cagtagttct ggcggcttca
      361 gtgttgtatt tcataccttt tgcatcttct gctttaaaat gagtaagacc aaaacttaag
      421 ctcaaatcac tatttatatc gcccataaca tcaatttcaa atcccttgct caaaacacct
      481 tttgaagcga tataagcaga ttgtgacgta ccaggtatct ttatatctgg ttcataagcc
      541 gttgcaagct tatcttgttc tattttaaat agaccaaatg aagtttgaag agctcctcca
      601 aagtactctg ctttgatacc gacttcatag tctttacctt ctatgggatc aagatatttt
      661 ccatttatat cttttttatt ttgcggttta aatatacttg tataactagc ataaagagaa
      721 taattttcgt ttaaatcata tactattcct atgtacggag ttatttctct tgtaaaattt
      781 ctatttgcat ttccgccttc aatgctatat ttccagtaac tcattctacc gcctactaaa
      841 aatttagcat agtctgtaat ttgaaattta tttgccatat atattgcttt ttgaatagtt
      901 ttatcaggat tattttgatc tatatatgga aatctcggat cgtttatata taaattgttg
      961 aaatttaaaa tagtatcgga agtaaattta agtccggcag gcgtattttt tgaattccaa
     1021 tagctactta cgttatctgc gcttttttta tagttattat acatagcacc aaaaacaaat
     1081 tcatgatttt tatcaaaagc ggcgtaagga agcgttagat aactatcgat attgtgtata
     1141 ttttcttcac gtttgtttgc atagacggaa agcccgtcga tatttcctat gttattcgta
     1201 gggagatttc caccataata aagcaaattt gagtcagtgt ttgcgcgtct aaacgaatat
     1261 gaataattaa aaacggcatc gtttctaaaa aaatatttat aatcggcgta aaaatcaaga
     1321 gtttttatat cccatctagt ccaaggctga gaaaaaattt ggtttttact aaaatttgtt
     1381 ctgcttttat ttgtataaaa tgctggcata ccgccccaac gaattccgtt tctttgcaaa
     1441 tcttgataaa atccggctaa agaaacccaa gagttatcgc ctacatcggc atctataacg
     1501 gtataaatca cgtcattttt acgtttataa taatccataa aagatctaga tttatcatgt
     1561 gaaaacgaaa gtcttcctct tatgctgcca tctttgttta aaggggataa aacatcacct
     1621 gagataccgt atttatcata tgatcctccg cttgttttta ataccgcttt aaaatctcta
     1681 ctatctgctc tttttcttat aaaattgata ctagccgcag gatttccggc gcccgctaga
     1741 agtccgtttg ctcctttgac tacttcaact ctctcatatg gtatcaagct catatcgttt
     1801 gctccaagtg aaaaaccgcc gaaactcggc atagaatcaa gcagataata atcaacacta
//
LOCUS       DAPPKW010000162         1832 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.162, whole genome shotgun sequence.
ACCESSION   DAPPKW010000162 DAPPKW010000000
VERSION     DAPPKW010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1832)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1832
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.162"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..521)
                     /locus_tag="RPW04_001970"
     CDS             complement(<1..521)
                     /locus_tag="RPW04_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="portal protein"
                     /protein_id="HDX6296042.1"
                     /translation="MNRFFIEKDAKQSLQIGEETTSTSGIIEPFFSFNQLLEAYYANV
                     YHRRAIKIKAGLLSQIETEESDLEKFLPAGVSPKNFLNTFAFNLELYGNAAIEKAGGS
                     TSYLFYNLPANQMRLKKDRRLFQKVNEKIVELEGYHFFYYSPNSRYYGEPDYLAALQQ
                     ILINQKADLYNDK"
     gene            653..1390
                     /locus_tag="RPW04_001971"
     CDS             653..1390
                     /locus_tag="RPW04_001971"
                     /inference="COORDINATES: protein motif:HMM:NF025901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296043.1"
                     /translation="MAKRLKDIAITHISLVKEGANGKSVIYKSKDALEDYFRSVKIAK
                     NDTEKGIVYGIVYSPDEIDTQGDAASAAEIEKAAFSFMKGLNIKNVDRDHNFKPEGAY
                     ICESWIVKSGDPLFPNEKEGSWAVGIKLESDELKEAVKKGDLKALSMAGTAIKEEDDG
                     LLKSILKGFEAILKGFNAEKNIKEGEQLEREKEVAEVIKGLSSIKEKLDELDSLKKDM
                     NELKNELKKSKQENATQTNENDIGGLL"
     gene            1390..>1832
                     /locus_tag="RPW04_001972"
     CDS             1390..>1832
                     /locus_tag="RPW04_001972"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phage capsid protein"
                     /protein_id="HDX6296044.1"
                     /translation="MAKHLRELLKATGTINAVDMYSTSTLRPEVSNKIIKTIIDKSDF
                     LSKVTLDKTKKLSKSFDTWNLASGILVRVNSGDKPTNAQRQKIGVSSVLIENKVVQLF
                     AKITQDTLEDNAENPNFENETFDSFATAFSNDLQNLGMIGSKDDYA"
BASE COUNT          673 a          275 c          373 g          511 t
ORIGIN      
        1 aacttatcat tatacagatc tgctttttgg tttattagga tttgttgtaa agctgctagg
       61 tagtctggtt cgccataata cctgctattt ggactgtagt aaaaaaaatg gtatccctct
      121 agttccacaa tcttttcatt cactttttga aataggcgcc tatctttttt aagccgcatt
      181 tggtttgctg ggagattgta aaaaaggtag ctggtactcc cgcctgcttt ttctatggcg
      241 gcgtttccat agagttctaa gttaaaagca aatgtgttta ggaagttttt agggcttaca
      301 cctgcaggta agaacttttc taagtcgctt tcttctgttt ctatttggct taaaagacct
      361 gcttttatct ttatagcgcg cctatgataa acatttgcgt aatatgcttc taaaagttgg
      421 ttaaaactaa aaaatggctc tataatcccg cttgtggagg tagtctcttc tcctatttgc
      481 aaactttgtt ttgcgtcttt ttctataaaa aatctattca taatgtctcc tgcaaagtaa
      541 aaaagcaaag ttagcacaaa aaaagattta aaaatatcta tatatagcta tatagagtga
      601 ctaaatttat aaaaactttt aaaatgcacg caataatttt tggaggataa acatggctaa
      661 aaggcttaaa gatatagcta taacgcatat ttctttagta aaagaaggtg caaatggcaa
      721 gagtgtaatt tataagagca aagacgcgct agaagactat tttagaagcg taaaaatagc
      781 taaaaacgat acagaaaaag gtattgttta tggcattgtc tatagcccag acgagatcga
      841 cacgcaagga gacgcagcta gtgcagcgga gatagaaaaa gcagcatttt cttttatgaa
      901 ggggttaaat ataaaaaatg tagacagaga ccacaacttt aaaccagagg gcgcctacat
      961 ttgtgaaagc tggatagtta aaagcggtga tccgctattt ccaaacgaaa aagaaggaag
     1021 ctgggcagtg ggcataaagc tagaaagcga cgagcttaaa gaggcggtaa aaaaaggaga
     1081 tttaaaagca ctatctatgg ctgggacggc tataaaagaa gaagatgatg gtcttttaaa
     1141 aagcatatta aagggatttg aagctatttt aaaaggtttt aatgcagaaa aaaatataaa
     1201 agaaggagag cagttggaga gagaaaaaga agtagcagag gtgattaaag gtttaagcag
     1261 cataaaagaa aagctagatg aactagactc tttaaagaaa gacatgaatg agcttaaaaa
     1321 tgagcttaaa aaaagcaaac aagaaaatgc tacacaaaca aatgaaaacg atataggagg
     1381 actactttaa tggctaaaca cttaagagaa ttgctaaaag ctacaggaac tataaacgct
     1441 gtagatatgt attctacctc tactttgcgt ccagaggttt caaataagat aattaagacc
     1501 ataatcgaca aatcagactt tttaagcaag gtgactttgg ataaaacaaa gaagctaagt
     1561 aagagttttg atacttggaa tttagctagt gggatactag tccgcgtgaa ttctggtgac
     1621 aagccaacta acgcgcaacg ccaaaaaatc ggcgtaagct ccgttttaat agaaaataaa
     1681 gttgttcagc tttttgcaaa aattacgcaa gatacactag aagataacgc agaaaatcca
     1741 aatttcgaaa acgaaacatt tgatagtttt gcgaccgcat ttagtaacga tttgcaaaat
     1801 ctagggatga taggatcaaa agacgattac gc
//
LOCUS       DAPPKW010000163         1783 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.163, whole genome shotgun sequence.
ACCESSION   DAPPKW010000163 DAPPKW010000000
VERSION     DAPPKW010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.163"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..821
                     /locus_tag="RPW04_001973"
     CDS             <1..821
                     /locus_tag="RPW04_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009495778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="restriction endonuclease subunit M"
                     /protein_id="HDX6296045.1"
                     /translation="CPCNDGEKSNFYHYFNTNFKNLEIKKLITTTFNINDPNAKGRKI
                     EVTKDEKKETELQGRGDFRSDEVRELIRQADIVVTNPPFSLFRDIIKIVIEENKKFLI
                     VGGTYSITYKMIFELYEQGRIWLGNNQVQIFTRPNGSKKRFSNINWFTNLKSLKHLEP
                     IKLTKKYRNNEDKYPEYDNYKIIEVTSYKDIPMDYNGVIGVPLTFFLRYNPAQFKILG
                     CDFQIKEKYPELVKWDYKENNTKSCVLDGKELFTRIILQRKNELIPRLRLQNQI"
     gene            853..1125
                     /locus_tag="RPW04_001974"
     CDS             853..1125
                     /locus_tag="RPW04_001974"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296046.1"
                     /translation="MKFEELESEFSGLPDNFLCQTVCEIYKITNKELSDKLGIEIEVL
                     NSLQDNDERLAKSAKVALELMHIIDIMDNIIMDNIISILEKKDMNE"
     gene            1184..1378
                     /locus_tag="RPW04_001975"
     CDS             1184..1378
                     /locus_tag="RPW04_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004319235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296047.1"
                     /translation="MAFLIIHLVGIGLNIILYFLKIPSGIEKIINTNPLQITTAIICY
                     LVFNAMLYVVIKIRFMITGK"
BASE COUNT          798 a          206 c          257 g          522 t
ORIGIN      
        1 tctgcccttg caatgacggg gaaaagagca atttctatca ttattttaat acaaatttta
       61 aaaatctaga gataaaaaaa cttataacaa caacttttaa tataaatgac ccaaatgcaa
      121 aaggaagaaa aatagaagtt acaaaagatg aaaaaaaaga aacagagttg caagggcgtg
      181 gtgattttag aagtgatgaa gtaagagagc ttataagaca ggcagatatt gtagttacaa
      241 atccaccttt ctcgcttttt agagatataa tcaagatagt aattgaagaa aataagaaat
      301 ttctaatagt aggcggaaca tattcaatta cttataaaat gatatttgaa ctatatgagc
      361 aaggtagaat ttggctagga aataaccaag tacaaatttt tacaagacca aacggaagta
      421 aaaaaagatt ttcaaatatt aactggttta caaatttgaa gagtctaaag cacctagagc
      481 cgataaagct aactaaaaaa tacagaaata atgaagataa atatccagaa tatgataatt
      541 acaaaatcat agaagtaaca agttataagg atataccaat ggattataat ggagtaatag
      601 gtgtaccatt aactttcttt ttaaggtata atcctgcaca atttaaaatc ttaggatgcg
      661 actttcaaat aaaagaaaaa taccctgaac tagtaaaatg ggattataaa gaaaataaca
      721 ccaaatcttg cgttttagat ggaaaagagt tatttactag aataattttg caaagaaaaa
      781 acgagctaat accaagatta agactacaaa atcaaattta aaaaatagaa attaaaaata
      841 aggagacaaa aaatgaaatt tgaagaatta gagtcagagt tttcaggatt acctgataat
      901 tttttatgtc aaacagtttg cgaaatttat aaaattacaa ataaagaatt atctgataag
      961 ttaggaattg aaatagaagt gctaaattct ctacaagata atgatgaaag attggcaaaa
     1021 tcagctaaag tagctttaga attaatgcac ataatagaca taatggacaa tattataatg
     1081 gacaatatta tttcaattct agagaaaaaa gatatgaacg agtaattaga tgaagcaaaa
     1141 gaaaaaatta aaactattta ataacccatt aaagcagttt atattggcat ttttaataat
     1201 acacctagta ggaatagggc ttaatatcat actttatttt ttaaaaatac caagcggtat
     1261 agaaaaaatc ataaatacaa atccactgca aataacaacg gcaataattt gctatctagt
     1321 ttttaatgca atgttatatg tagtgataaa aataagattt atgataacag ggaaataatt
     1381 acaatcaaga gttataagta agcacagaca tatagcaaaa ttttaatgca atctccaaaa
     1441 taactatatt ataacttata attaactata ataataacta ttatttaatt tataaataac
     1501 ttccatatta actaacttat aactataatt taactaaaaa tataaaatta tccaaaaaaa
     1561 ataaatcaat gatttacaac aaaaaaggga gaagaaaagt aacgggaggt aaaataatgc
     1621 acaacaggga taaaagctcg ttttttagat tttaaggttt agttaagttt ttaaaaattg
     1681 gcttttaccc cctttttatc gtgccttagt gctattttat ggattacatt tttttacaaa
     1741 atgttccaca agaccaataa aaagcaagtg ataataacag tac
//
LOCUS       DAPPKW010000164         1767 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.164, whole genome shotgun sequence.
ACCESSION   DAPPKW010000164 DAPPKW010000000
VERSION     DAPPKW010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1767)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1767)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.164"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..524)
                     /locus_tag="RPW04_001976"
     CDS             complement(<1..524)
                     /locus_tag="RPW04_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="portal protein"
                     /protein_id="HDX6296048.1"
                     /translation="MSGKFIIEKGANDSLQWSSETTSINGLIEPFFSFNQLLDAYYAN
                     VYHRRAIKIKAGLLSQIELEDSDLYKFLPPNISSKTFLNIFALNLELYGNAAIEKSGS
                     NNSFFLYNLPANEMRVKKDRSLYQYSSSKITKLDGYHFCYYSPRSRYYGEPDYLAALQ
                     QILINKKADDYNDK"
     gene            844..1599
                     /locus_tag="RPW04_001977"
     CDS             844..1599
                     /locus_tag="RPW04_001977"
                     /inference="COORDINATES: protein motif:HMM:NF025901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296049.1"
                     /translation="MNKEEEVMPKRLSEIEITHISLVKEGANGKSVIYKSKEGANYQR
                     SIKIAKSDEEKGIIYGIVYSPDEVDTQGDSASAIEIEKAAYGFMKSLNINNVDKNHDF
                     KPEGAFVCESWIVKSGDPLFGDQKVGSWAVGIKLESDELRDAVKKGDLKALSMAGTAI
                     KEDEESGLLKSILKGFESVLKGFNKEQIEQKGEKLGEISKMEQITKGLGEISSRLERL
                     ENLEKEVGELKNELKKSKQDTQNTQDDKSKGVL"
     gene            1599..>1767
                     /locus_tag="RPW04_001978"
     CDS             1599..>1767
                     /locus_tag="RPW04_001978"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296050.1"
                     /translation="MSKKLSEILKSTGSINATDMYANDTLRAEQANEIIKTIIDKSDF
                     LSKVTLDRTKKL"
BASE COUNT          663 a          258 c          351 g          495 t
ORIGIN      
        1 aatttatcat tataatcatc tgctttttta tttataagta tttgctgaag tgctgctaaa
       61 tagtcaggct caccatagta tcttgagcgt gggctataat agcagaaatg ataaccatca
      121 agtttggtta ttttagagct agaatattga tataagcttc tatctttttt taccctcatt
      181 tcattggctg gtaaattata aagaaaaaat gaattattgc taccagattt ttctatggcc
      241 gcattgccat aaagctccaa atttagagca aagatattta aaaatgtctt tgagctgata
      301 tttggtggaa gaaatttata aaggtcgcta tcttctagct caatttggct tagaagtccg
      361 gcttttatct ttatagcacg tctgtgataa acgtttgcgt aatacgcatc tagaagctga
      421 ttaaagctga aaaatggctc aataagtcca tttatgctag ttgtttcact gctccactgc
      481 aaactatcgt tcgcgccttt ttctattata aatttaccgc tcacccttat ctcctttttt
      541 acttttatct acttttaacg cagagtaaaa ctctgctaaa gtagcaaata ctaaagcccc
      601 acaagtgggg taccccaaaa agcgaagcta caaaagataa aaacaacgaa ttagaagagc
      661 tatttaacgc cacaaatatc tttagtgggg actttagtag gcgtagagca acggatttta
      721 ttcgttgcga ctttacgcat gagctacttt gccactcatt ttaatgcaaa aaaatctttt
      781 aaaatatcca tatactcgta tttagagtga ttgtagataa aaaaagtatt aaaatggctg
      841 gaaatgaaca aggaggaaga agtcatgcca aaaaggctta gcgaaataga aataactcat
      901 atttctctag ttaaagaagg tgcgaacggc aaaagtgtaa tctataaaag caaagaaggt
      961 gccaactatc aaaggagcat caaaatagct aaaagcgatg aagaaaaagg aattatatat
     1021 ggaatagtat atagccctga tgaggtcgat acacaaggag atagtgctag tgctattgag
     1081 atagaaaagg ctgcttatgg ctttatgaaa agcctaaata tcaacaatgt ggataaaaac
     1141 catgacttca agccagaagg tgcttttgtc tgtgaaagct ggatagttaa gagtggagat
     1201 ccactatttg gcgaccaaaa agtaggaagc tgggctgtag gtatcaaact agaaagtgat
     1261 gagctaagag atgctgttaa aaaaggtgat ctcaaagcac tatcaatggc tggaacggct
     1321 ataaaagaag atgaagagag cggactttta aagtcaattt taaaaggctt tgaaagtgtt
     1381 ttaaaaggat ttaataaaga gcaaatagag caaaaaggag aaaaattggg agagattagc
     1441 aaaatggagc aaatcacaaa aggacttggc gagataagta gcaggcttga gaggcttgag
     1501 aacttagaaa aagaggttgg tgagcttaaa aatgagctta aaaaaagtaa acaagataca
     1561 caaaatacac aagacgataa atcaaaaggg gttctgtaat gagtaaaaaa ttaagtgaaa
     1621 ttttaaaatc aactggcagt ataaatgcca ctgatatgta tgcaaatgat actttaagag
     1681 ctgagcaagc aaatgagatt attaagacta ttatagacaa atcagacttt ttaagcaaag
     1741 ttacactaga tagaactaaa aaattaa
//
LOCUS       DAPPKW010000165         1745 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.165, whole genome shotgun sequence.
ACCESSION   DAPPKW010000165 DAPPKW010000000
VERSION     DAPPKW010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.165"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            13..366
                     /locus_tag="RPW04_001979"
     CDS             13..366
                     /locus_tag="RPW04_001979"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296051.1"
                     /translation="MKNTSPLSKDEVVKHIDKTGVERVWKKSNDHIAKKHKETTSANV
                     VKALNSINTTAKNKDNRYINAFSDNGYFIVFNGNEIVTCYKPNENKKRAFDYFKNVSV
                     YDKKEVIKWKIANLL"
     gene            342..641
                     /locus_tag="RPW04_001980"
     CDS             342..641
                     /locus_tag="RPW04_001980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296052.1"
                     /translation="MENRKFVIEFYGIEWFIDLPSHIDDGDSGLKIIQPITRIRDKRI
                     VRIFDIFTPSKENIDEAKEYKEFYEICDFEVLPNGHKFTGTFIDALEYIKANFGK"
     gene            682..888
                     /locus_tag="RPW04_001981"
     CDS             682..888
                     /locus_tag="RPW04_001981"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296053.1"
                     /translation="MTIIEAFSKTKTLQNQNRNAVVKIVKKNYSGYDVQIEPVELTVI
                     KNSLEMISQNANSFMANVNAKYGK"
     gene            869..1087
                     /locus_tag="RPW04_001982"
     CDS             869..1087
                     /locus_tag="RPW04_001982"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296054.1"
                     /translation="MQNMENNSAIIEPTIDDISSETLEKVGDVIAKIRELPQDEFGKR
                     NFSLTYRDMEYRDLIELKDRQEKILFTT"
     gene            complement(1216..1686)
                     /locus_tag="RPW04_001983"
     CDS             complement(1216..1686)
                     /locus_tag="RPW04_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010404290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDX6296055.1"
                     /translation="MNKIFKNFMFRVGAEVVNESKAIAPFKTGNLKKDIQVFKADQTS
                     VTIGNSKLAPYAKFVHFGTKPHMIKVKKAKALAWTRSGHPVSGALVGGGGRTGSRTAK
                     AFAKQVNHPGTKAQPYLEDGLNNYISSSGLAMAKEDLAKDIRNKVLNDIKKALK"
BASE COUNT          619 a          279 c          324 g          523 t
ORIGIN      
        1 gatggagtaa agatgaaaaa tacaagcccg cttagcaaag atgaagtagt aaagcatata
       61 gataaaacag gcgtggaaag agtttggaaa aagagtaacg accatatagc caaaaaacat
      121 aaagagacta ctagtgctaa tgttgtaaag gctttaaact ctataaatac aacggctaaa
      181 aataaggaca atagatatat aaacgctttt agcgataatg ggtattttat agtgtttaac
      241 ggcaatgaga tagtgacttg ttataagcct aatgaaaaca agaaaagagc atttgattac
      301 tttaaaaatg tttcagtata tgataaaaaa gaggtgataa aatggaaaat cgcaaatttg
      361 ttatagaatt ttatggtata gagtggttta tagaccttcc atctcacata gatgatggcg
      421 atagcggact aaagataatc cagcctatta caaggataag agataaaaga atagttcgta
      481 tatttgatat ctttactcct agcaaagaaa atatagatga agcaaaagag tataaagaat
      541 tctatgagat ctgcgacttt gaagtcttgc caaacggtca taaatttact ggtactttta
      601 tagacgcttt agaatatatc aaagcaaatt tcggcaagta aaatttataa gtttatttag
      661 actaaatatt aggggcgaaa tatgactata atagaagcat ttagcaaaac aaaaacattg
      721 caaaatcaaa atcgcaacgc agtagttaaa atagtgaaaa aaaattatag tggatatgat
      781 gttcaaatag agccagtaga gcttactgtt attaaaaact ctttagaaat gatatctcaa
      841 aatgcaaata gctttatggc gaatgtgaat gcaaaatatg gaaaataata gtgcgattat
      901 agaaccaacg atagatgata ttagttcaga aaccttagaa aaagttggtg atgtaatagc
      961 aaaaattcgc gaattgccgc aagatgaatt cggtaagcgg aatttttcgc tcacctacag
     1021 agatatggaa tatcgggatt taatagagtt gaaggatcga caagaaaaga tactttttac
     1081 aacctagccc gcgacggttt ttcacttatg gttacttagt tatgagcata tacaaagcct
     1141 agaagcagta ggaaatttct caaaagtaaa tctgtaggga tttgcggtta aaatttagaa
     1201 tgacagaaaa tagctttatt tcaaagcctt cttaatatcg tttaaaacct tatttcttat
     1261 atcttttgca aggtcttctt tagccattgc aagccccgag ctacttatat aattattcaa
     1321 accatcttct agatagggct gagccttagt gcctgggtga tttacttgct ttgcaaatgc
     1381 ttttgcggtg cgcgaacccg tccgccctcc gccgcctact aaagccccgc ttacggggtg
     1441 ccccgaccgg gtccatgcca aagcttttgc ttttttaacc ttaatcatat gtggttttgt
     1501 gccaaaatgt acgaatttag cgtaaggcgc aagtttagaa ttcccgatag ttacgcttgt
     1561 ttgatctgct ttaaatactt gtatatcttt ttttaaatta cctgttttaa acggcgctat
     1621 agccttgctc tcatttacaa cctctgcacc tactctaaac ataaagtttt taaaaatctt
     1681 attcatatta ttatcgctcc gccgcttttt ttagctcgca ccacgcctat atgagataac
     1741 gctaa
//
LOCUS       DAPPKW010000166         1651 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.166, whole genome shotgun sequence.
ACCESSION   DAPPKW010000166 DAPPKW010000000
VERSION     DAPPKW010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1651
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.166"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            90..545
                     /gene="tnpA"
                     /locus_tag="RPW04_001984"
     CDS             90..545
                     /gene="tnpA"
                     /locus_tag="RPW04_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008353586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HDX6296056.1"
                     /translation="MQKIKYKSNHNIVYSCKYHIIWCPKYRRKVLVGEVEKRLKEIII
                     QVANELNVEIIEMETDKDHIHILADIDPGFGVMKFIKTAKGRSSRILRDEFAFLKSRL
                     PTLWTNSCFISSVGGAPLEVIKQYIENQQISERPKQKQKWKNYVANIQI"
     gene            523..1623
                     /locus_tag="RPW04_001985"
     CDS             523..1623
                     /locus_tag="RPW04_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002846383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDX6296057.1"
                     /translation="MLLTYKYKLYKSKKTKHIDELIDIACSIYNHCIALHKRHYKLYH
                     KSLNKVKLQKHLTKLKKLNKYKKWNNLGSQAIQQITERIDNAYKKFFKKQGGLPSFKK
                     RIKYKSFTLKGSVGYKLEDNVISLNGYDYKFSKNQTINADDKIKTITIKRDNLGSFYI
                     CVSLETKDKAHTTTGKSVGIDFGLKTFLTLSDNTSFNSPLIYLKSLKELQSKQRKLSL
                     KKKGSNNRKKAKLELAKFHIKLANQRKDYFFKLSNELAKKYDNIFIEDLNLKAMAKIW
                     GRKINDLAFNEFINILATKTNVIKINKFYPSSKTCSCCGYIKEDLSLKDRIFDCPNCK
                     TKLDRDYNASLNIYRVGASTLRGEFVRPTKVG"
BASE COUNT          692 a          207 c          241 g          511 t
ORIGIN      
        1 cccctagctt tagctatggg gatataaggc tttctcaaaa aaattaaaat ctattgtatt
       61 atttaatcaa ttattgtata attcaattta tgcaaaaaat aaaatataaa tctaatcata
      121 atatagtcta ttcttgtaaa tatcacatta tttggtgtcc taaatatagg cgtaaagtat
      181 tagttggtga agttgagaaa agactaaaag agataattat acaagttgca aatgagttaa
      241 atgttgaaat tatagagatg gaaacagata aagaccatat tcacatttta gctgatattg
      301 atcctggttt tggagtgatg aaatttataa aaacagcaaa aggcagaagt agcagaattt
      361 taagagatga gtttgctttt ttaaagtcaa gattgcctac tttatggact aattcttgtt
      421 ttatatcatc agttggtgga gcaccacttg aagttattaa gcaatacatt gaaaatcaac
      481 aaattagcga acgccctaaa caaaaacaaa aatggaaaaa ctatgttgct aacatacaaa
      541 tataaacttt ataagtctaa aaaaacaaaa catatagatg aacttataga tatagcttgt
      601 agcatttata atcattgtat agccctacat aaaaggcact ataaacttta tcataaaagc
      661 ctaaacaaag ttaagcttca aaaacactta actaaattaa aaaagctaaa taaatataaa
      721 aaatggaata acttaggctc acaagcaatt caacaaataa ccgaaagaat agataatgct
      781 tataaaaaat tctttaaaaa acaaggcgga ctacctagct ttaaaaagcg tattaaatac
      841 aaatctttca ctttaaaagg aagtgtgggt tataaactag aagataatgt tatctctctt
      901 aatggctatg attataaatt tagcaaaaat caaacaataa atgctgatga taaaataaaa
      961 actataacca ttaagagaga taatttaggc tctttttata tctgtgttag tttagaaaca
     1021 aaggataaag ctcataccac aacaggtaaa agcgtgggta tagactttgg tcttaaaaca
     1081 tttctaacac ttagtgataa cactagcttt aactcgcccc taatttatct taaatcttta
     1141 aaagagcttc aatctaaaca aaggaagctt agtttaaaga aaaaaggctc aaacaataga
     1201 aaaaaagcta aattagaatt agctaaattt catataaaat tagctaatca aagaaaagat
     1261 tatttcttta aactctcaaa tgagttagct aaaaaatacg acaatatttt tattgaagat
     1321 ttaaatttaa aagctatggc taaaatttgg ggtagaaaga taaatgattt agcgtttaat
     1381 gaatttatta atatcttagc aactaaaaca aatgttatta agattaataa attttatcca
     1441 agttctaaga cttgcagttg ttgtggatat atcaaagagg atttaagtct taaagataga
     1501 atatttgatt gccctaattg caaaacaaaa ttagatagag attataatgc tagtttaaat
     1561 atttatagag ttggggcatc aactcttaga ggagaatttg taagacctac aaaagtaggc
     1621 tagatttgtt gatactagaa acccccgcat t
//
LOCUS       DAPPKW010000167         1578 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.167, whole genome shotgun sequence.
ACCESSION   DAPPKW010000167 DAPPKW010000000
VERSION     DAPPKW010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.167"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(159..1538)
                     /locus_tag="RPW04_001986"
     CDS             complement(159..1538)
                     /locus_tag="RPW04_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011139183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDX6296058.1"
                     /translation="MTIKSKTQKQISLGLIAAILPALLVAILSIAYFEASLQIGAFVG
                     ILTLLIILWTNQALPLGIVSLLPIILFPAFGILDVKSTTGNYANPIIFLFLGGFMLAT
                     AVEKIGLHRIIAKKVLSYFPSTPKGVITALGLISVMLGSALSNSTVALLLIPVAMSIS
                     NDPILKTRFLLSVAFGASISGITTPIGTPPNLIFIGFLETALFESIGFVTWIAMMLPL
                     TLCMLYAMVKILSYNIGDHTLQNDIFKDISINLEHKRLIVMIAALLIILLLNSPIKPI
                     YPGLGLNENVILLAFGLLMFIPKIGFLKWEDSKSIPYEINFLFGAGFCIAMAISEMQL
                     GNSFKVIFEFFGTLPILVFLLCVCMVVLFLTMFISSTALIAILLSIIFASTKGFLDPQ
                     MQSLVMLVATICVGFSFMFPISTPPNAIVFSKGEIKIWDMFRFGILLSLVGVTFIIIL
                     SMLYWRWFL"
BASE COUNT          605 a          253 c          230 g          490 t
ORIGIN      
        1 tcatttttct ctccttatga tttaatgata ttaaatttaa catagcataa taccagatat
       61 taaatttagc caaaatcata ttatagtacg ataaatatat tattaataat aaataaaaat
      121 ataataactc attatggtgt attaataaaa caaaatactt acaaaaacca tctccaataa
      181 agcatagaaa gtataattat aaatgtaact ccaactaaac taagcaaaat cccaaagcga
      241 aacatgtccc aaattttaat ctctccttta ctaaaaacga tagcatttgg tggagtcgat
      301 ataggaaaca taaaagaaaa accaacgcaa atagtcgcta caagcataac taaactttgc
      361 atttgaggat ctagaaatcc ttttgtagag gcaaatataa tagaaagcaa aattgctatt
      421 aatgcagttg agcttatgaa catagttaaa aatagcacaa ccatacagac gcaaagcaga
      481 aaaaccaata taggaagagt gccaaaaaat tcaaaaataa ctttaaacga atttccgagt
      541 tgcatttcag atatcgccat tgctatgcaa aatccagctc cgaataaaaa atttatttca
      601 taaggaatag actttgaatc ctcccatttt aaaaatccta tttttggtat aaacattaag
      661 agtccaaacg ccagtaaaat cacattttca ttcaatccaa gtccgggata aataggtttt
      721 ataggcgaat ttaaaagtaa aattataagt agagcggcta tcattacgat aagtcttttg
      781 tgttctaaat ttatgcttat atctttaaaa atatcatttt gtaaagtatg atctcctata
      841 ttataagata aaatttttac catagcatat aacatacata gcgttagtgg tagcatcata
      901 gctatccaag ttacaaatcc tatactttca aatagagccg tttctagaaa tcctataaaa
      961 attaggttcg gaggcgttcc gataggagta gtaattccgc ttatacttgc accaaaagct
     1021 actgatagca aaaaacgagt ttttaaaatc ggatcattag atatagacat tgccactggt
     1081 ataagaagta atgctaccgt ggagtttgaa agcgcacttc caagcatcac gctaataagt
     1141 cctaatgctg ttataactcc ttttggagtt gatggaaaat aacttaaaac ttttttagct
     1201 atgattcgat gcaggcctat tttttcaaca gcagttgcca acataaaacc gcctaaaaat
     1261 aagaatatta taggatttgc atagtttcca gttgtgcttt ttacatctaa aattccaaaa
     1321 gcaggaaaaa gtatgatagg tagcaatgat acgatgccta aaggtaaagc ttgatttgtc
     1381 cataatatga taagcaaggt caaaatacct acaaaagctc ctatctgtaa agaagcttca
     1441 aagtacgcta tactaagaat tgctactagt agagcaggga gtatagcggc tatcaagcct
     1501 aatgaaattt gtttttgtgt ttttgatttt attgtcatat aaattttact ttttaatttc
     1561 ataagtttac ctcgtatt
//
LOCUS       DAPPKW010000168         1556 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.168, whole genome shotgun sequence.
ACCESSION   DAPPKW010000168 DAPPKW010000000
VERSION     DAPPKW010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.168"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            150..1205
                     /locus_tag="RPW04_001987"
     CDS             150..1205
                     /locus_tag="RPW04_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HDX6296059.1"
                     /translation="MRKIFYRIHKYLAIIFFIPLIVIGFSGSVLVYKTEFDNLIMPNV
                     VSVTPGGQRVKFDDMTRNINNTYINHEIVGWLINTDNTKSDRVYLIEHNDTQWKSIYI
                     DQYTGKIMDKLKPHDSYLSDIILEIHDNLLLGQNGRIMVGILGLIMFFIGVSGFVIYN
                     RFWINLFKLRFKNIAVAMTDIHKFIGVWASALLFIIGLTGSWWALNFLFKQAGQIDEN
                     FRINEKIYNKNLSIDELFEKSQIDFDGFIPYYISYPFYIDRNITFYGMNKNQNFLHHQ
                     YSNQVSYDKQSGKLIEIKNIENAKISDRFLSTFRKAHFGYYNEVTKFIWFLVGLTPFM
                     LSITGIYLWLKRKKIRK"
     gene            1224..>1556
                     /locus_tag="RPW04_001988"
     CDS             1224..>1556
                     /locus_tag="RPW04_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDX6296060.1"
                     /translation="MKLSRILLSAVVAIFVLQENTKILANETNQVSLEAVDIAAPIRN
                     DDKNYNTQEIVKSTTRLDLNVREIPQSLSIITEAKLRDLDVNDYQELLRHIPGVTLNK
                     WDERVYPTI"
BASE COUNT          583 a          189 c          259 g          525 t
ORIGIN      
        1 aattttataa attttataac ggattatttt aataatcatt attattaagc aatatataag
       61 ctttagttat atataattac atcattttta tcttaatttt aatattttct aatatataaa
      121 attaaattac attatattta aggataaatt tgagaaaaat attttataga attcataaat
      181 acctggcaat tatatttttt attccgctta tcgttatagg atttagcgga tctgtgttgg
      241 tatataaaac agagtttgat aatctcataa tgccaaacgt agtgagcgta acacctggcg
      301 ggcaaagagt taaatttgat gatatgacta gaaatatcaa taatacttat atcaaccatg
      361 aaatagtagg ttggcttata aatacagata atacaaaatc agatagagtt tatctcattg
      421 aacacaatga tacacaatgg aagtcaatat atattgatca atacacaggc aaaattatgg
      481 ataaactaaa gccgcacgat agttatctta gcgatattat acttgagatt cacgacaatt
      541 tacttttggg gcaaaatggc aggataatgg ttggaatttt gggtttaata atgtttttta
      601 taggagttag cggatttgtt atttataacc ggttttggat aaatttattt aagttaagat
      661 ttaaaaatat agcagtcgct atgacggata tacataaatt tataggagtt tgggcgtctg
      721 cgcttttatt tataatcggt cttactggat cttggtgggc attaaatttt ttatttaaac
      781 aagctggtca aatagatgaa aattttagaa taaatgaaaa aatttataac aaaaatttat
      841 cgattgatga gctttttgaa aagtcccaaa ttgattttga cggatttata ccttattata
      901 taagttatcc gttttacatc gatagaaaca tcacgtttta cggaatgaat aagaatcaaa
      961 atttccttca tcatcagtac tcgaatcaag taagttacga caaacaaagc ggaaaattga
     1021 tagagataaa aaatatagaa aacgcaaaaa taagcgatcg atttttatct acatttagaa
     1081 aagcgcattt tggttattac aatgaggtga ctaaatttat ctggttttta gtgggtttga
     1141 cgccatttat gctaagcatt accggtattt atctttggtt aaaaagaaaa aaaataagaa
     1201 aataatgaaa ctaaggagac gatatgaagt taagtagaat tttactttcg gcagtagttg
     1261 ctatatttgt acttcaagaa aatactaaaa ttttagcaaa cgaaacaaat caggtatctt
     1321 tagaggctgt agatatagca gctcctataa gaaatgacga taaaaactat aatactcaag
     1381 agatcgttaa aagcactaca aggcttgatt tgaatgttcg agaaataccg cagtctttaa
     1441 gtattataac agaagcaaag ctaagagatc ttgacgtaaa tgactatcaa gagctgcttc
     1501 gtcatatacc aggagttact cttaacaaat gggatgagcg cgtttatccg actatt
//
LOCUS       DAPPKW010000169         1527 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.169, whole genome shotgun sequence.
ACCESSION   DAPPKW010000169 DAPPKW010000000
VERSION     DAPPKW010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.169"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..185
                     /locus_tag="RPW04_001989"
     CDS             <1..185
                     /locus_tag="RPW04_001989"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296061.1"
                     /translation="PDTSYQIECFTKESLVENIADLMQSSNEKSLEIYRDKSVYNLGH
                     SSEFIANFILEKLKEK"
     gene            185..>1527
                     /locus_tag="RPW04_001990"
     CDS             185..>1527
                     /locus_tag="RPW04_001990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296062.1"
                     /translation="MIYIYPYGNFGKSIEKCLKLFNLQYDIIDDSNNKISLNHTNIDS
                     KNDIVLICIAKNPNQIIDKLNLKGNFNHIDGVLYCLDILKTEFKFDKPNHSYEDILAE
                     LFGITNCLDQNSTSRSEFVKFFNQYGNFINNYYKNKFKNIKIWGGIDVSFSNMKHLYK
                     IPSILEQNGLNLIYIFQTKYYKEDPNKKFIIILNYYLWHFLDFLPNILSSANMKVSNN
                     TKLYFIEHAYCTPRVLPIISDNPKQELNGYLLKNKNNINLIGNKQDYEICEKIYNSII
                     VKAGYPSIDKNLENYSNDCKKEWVMIAFVDDAIDENSAFNLAKVLLENGYKVIARVHP
                     AFKENMKKLYSISNLNFIFDGSSSPIESFKNSFTVITNHSSLAHTYPLTTLRKAILFM
                     PNSILDKEIYGKTFFDENLHLKATNFDEILLNLKELEAKKDDLYEQEKIRSYRNN"
BASE COUNT          649 a          190 c          207 g          481 t
ORIGIN      
        1 ggccagatac ttcttatcaa atagaatgct ttactaaaga gagcttagtg gaaaatatag
       61 cggatcttat gcaaagtagc aatgaaaaaa gtttagaaat ttaccgtgat aaaagtgttt
      121 ataatctcgg gcattcaagt gagtttatag cgaattttat attagaaaag ttaaaggaaa
      181 agtagtgata tatatctatc catatggaaa ttttggcaaa agcatagaaa aatgcttaaa
      241 attatttaat ttacaatatg acattataga tgatagtaat aataaaattt ctttaaatca
      301 cactaatata gatagcaaaa acgatatagt attgatatgc atagcaaaaa acccaaatca
      361 aataatagac aaattaaatt taaaaggtaa ttttaatcac atagatggcg ttttatactg
      421 tttggatata ctaaaaactg agtttaaatt tgataaacca aatcatagtt atgaagacat
      481 tctagctgaa ttatttggaa taacaaactg tctagatcaa aatagtactt caagatccga
      541 atttgtcaaa ttttttaatc aatatggaaa ttttataaac aactactata aaaataaatt
      601 caaaaatata aaaatatggg gcggaataga tgttagcttt tcaaatatga aacacttata
      661 caaaatacca tctattttgg aacaaaatgg gctaaatttg atatatattt tccagacaaa
      721 atactacaaa gaagatccga ataaaaaatt tattataata ttaaactact atctatggca
      781 ttttttagat ttcttaccaa atatactatc atcggcaaat atgaaagtat ccaacaatac
      841 aaaactttat tttatagagc acgcctattg tacgcccaga gttttaccta taatatctga
      901 taatccaaag caagagctaa atggatattt actaaaaaat aaaaataata taaatttaat
      961 aggaaataag caagattatg aaatatgcga aaaaatatat aattcaatta tcgtcaaagc
     1021 tggttatcca agcatagata aaaacttaga gaactacagc aacgactgta aaaaagagtg
     1081 ggttatgata gcctttgttg atgacgcaat agatgaaaac agtgcgttta atcttgcaaa
     1141 agtactacta gaaaatggat ataaagtcat agcaagagtt catccagctt tcaaagaaaa
     1201 tatgaaaaaa ctatattcaa tatcaaattt aaattttatt tttgatggat ctagttcgcc
     1261 tatagagtca tttaaaaact cttttactgt tatcacaaat cactcaagtc tagctcacac
     1321 ctacccttta actacgctta gaaaagctat tttatttatg cctaacagta ttttagataa
     1381 agaaatttat ggtaaaacat tttttgatga aaatttacat cttaaagcta caaattttga
     1441 tgaaatatta ttaaatttaa aagagttaga agccaaaaaa gatgatttat atgagcaaga
     1501 aaaaattaga tcttatagaa acaatga
//
LOCUS       DAPPKW010000170         1470 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.170, whole genome shotgun sequence.
ACCESSION   DAPPKW010000170 DAPPKW010000000
VERSION     DAPPKW010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1470)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1470)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1470
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.170"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..1430
                     /locus_tag="RPW04_001991"
     CDS             <1..1430
                     /locus_tag="RPW04_001991"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HDX6296063.1"
                     /translation="STKSISTTGDIVTNLNNTTGTVGLGSATTKTGNVTIAVNGATNS
                     VNTGDLQATARSVVVNAEGSNGAITVGNVTAASASINGGNSSGAMTVGNIATTSASIT
                     SGSGSTTIGTVAAGSVAIDLSSTLGDVAVGKITSDNVLFNGAKLKDNGTAGTITIDAS
                     TGANFVATVNGGLGKDALTVKGSATTETIKIAGDLGLGGTTPADQKLTLDLDASTKLS
                     SLDISGLKGLGAATAIDLKNVVVDNKLIVDIKGNDAAETITVATPTATLTEIKLSGDL
                     DGGENSISITPTAAAVALTTIDLSGLTFTGGSLSTTITLLAEHIKIATINGSLGADTI
                     TVKDENKAVTIDLGDDTAKDIVDLSAVKTTDVTSDAKIAEDLISIANFNTGDSIKFKA
                     NIASYTNKGAVDGATLKDAIASANGDVANSVYGFTWKGDTYLVFNTANGSGNLAANDD
                     QLVKLIGTSIDLDSLNASNTDIIFA"
BASE COUNT          508 a          258 c          315 g          389 t
ORIGIN      
        1 tgtcaaccaa atctatatct actacaggcg atatcgtaac taatctaaac aacaccaccg
       61 gtactgttgg cttaggtagt gctactacaa agaccggtaa cgtaactata gcagtaaatg
      121 gtgcaacaaa tagtgttaat acaggggatt tgcaagcaac agcaagatca gttgtggtaa
      181 atgctgaagg ctcaaatgga gctataaccg taggcaatgt tacggctgca tcggcttcta
      241 taaacggcgg aaactcaagc ggagctatga ctgtaggcaa tattgcaaca acatcggctt
      301 ctataactag cggtagcgga agtaccacta taggtacagt tgcggcagga agtgtagcca
      361 tagatctatc tagtactcta ggcgatgtag ccgtaggcaa gataacatct gataatgtac
      421 ttttcaacgg tgctaagctt aaagataatg gaacagccgg aactatcact atagatgcaa
      481 gcacaggcgc aaactttgta gctaccgtaa atggcggatt aggtaaagat gctctaacgg
      541 taaaaggatc ggctactacc gaaactataa aaatagccgg tgatttaggt ttgggcggca
      601 ctactccggc tgatcaaaaa cttactcttg atttagatgc ttctactaaa ctaagtagct
      661 tagatataag tgggcttaaa ggtttaggag ccgctactgc aattgatcta aaaaatgtag
      721 ttgtagataa taaactaatt gtagatatca aaggtaacga cgcggctgag actatcactg
      781 tagctactcc aacagccact ttaacagaga taaaactaag cggtgactta gacggaggtg
      841 aaaacagtat tagcattact ccaacagcag ctgcagtggc tttaaccacc atagacttga
      901 gtggcttaac atttacaggc ggtagtctta gtactacaat tactcttctt gcagagcata
      961 taaagattgc aactattaat ggtagtttag gtgccgatac tataactgtt aaagatgaaa
     1021 ataaagcagt aactatagat ttaggtgacg atacagcgaa agatattgta gatttaagtg
     1081 cagttaaaac aacagatgta acaagtgatg ccaaaatagc agaagattta ataagtattg
     1141 ctaactttaa taccggtgat agtatcaaat ttaaagctaa tattgctagt tatacaaata
     1201 aaggcgccgt agacggtgca actctaaaag atgctattgc gtctgctaac ggtgatgtag
     1261 caaactcagt atatggcttt acatggaaag gcgatacgta tctagtgttc aatacagcta
     1321 acggtagcgg caacttagct gcaaatgatg atcaactagt aaaattaata ggtacatcga
     1381 tagatctaga tagccttaat gcgtctaata ctgacataat atttgcttaa tcgtatttag
     1441 actaaacctt aaaaaaatag tagatagttt
//
LOCUS       DAPPKW010000171         1395 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.171, whole genome shotgun sequence.
ACCESSION   DAPPKW010000171 DAPPKW010000000
VERSION     DAPPKW010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1395)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1395)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.171"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            305..1282
                     /locus_tag="RPW04_001992"
     CDS             305..1282
                     /locus_tag="RPW04_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HDX6296064.1"
                     /translation="MKKSVKLAFSAVVILSLANSLQAFEPKKPTCLAPAKPGEGFDLT
                     CKIAANSFAATHLLNKPMIVNFIPGGVGAVAYNHVIGQKPNDGDVIVAFNSGSALNIA
                     QGKFGKYNENAVKWLAGIGADYGAIVVRSDSKWQNFKDMLEDLKKDPKGFAIGSGGSV
                     GSQDWFKSILIAKTAGINPQDMKYVAFEGREESLTALLGGRIQIYSGGISELSGQLDS
                     GKYRVLAVLSDQRLDGKFKDIQTAKEQGYDVVWSTWRGYYMGPKVSNAQYNFWVEKLK
                     ELSQTDEFKKERDLGGLQPFTMIGSEFDHFVKSEVAKFRNMAREAGLAK"
BASE COUNT          523 a          185 c          252 g          435 t
ORIGIN      
        1 acacttataa tatagatatt aaaataatag aaccataaaa atatattttt aaatttattt
       61 ttattatttc agataaattt aaaattatac tatgtgtatt tttgaaaaaa tatacaatat
      121 ataacaacat atcgataaat atatgcacaa ctattttatg ttaaagctta tattttttat
      181 ataataaaat tattttttac cgaatttatg ctaaaaaact taaataataa atcttatttt
      241 atcaaactta ttatatttat ttatatgtta taatccttga aaatcaaaaa ataaggaatt
      301 aattatgaaa aaatctgtga aacttgcttt tagcgctgtc gttatactta gtttagcaaa
      361 ttctctacaa gcatttgaac ctaaaaaacc tacttgttta gcaccggcaa aaccgggaga
      421 aggatttgat ctcacctgca aaatcgcagc caactctttt gctgcaacac atctgctaaa
      481 caaacctatg atagtaaatt ttatacccgg aggagtcgga gccgtagcgt ataatcacgt
      541 aataggtcaa aaaccaaacg acggagatgt tatagtagca tttaattctg gttctgcttt
      601 aaatatagct cagggaaaat tcggaaaata taatgaaaat gccgtaaaat ggcttgctgg
      661 tattggagct gattatggag ctatagtcgt aagatcagat tcaaaatggc aaaatttcaa
      721 agatatgtta gaagatctaa aaaaagatcc gaaaggcttt gctataggat caggaggctc
      781 agtaggaagt caagactggt ttaagtctat acttatagcc aaaaccgccg gtataaatcc
      841 gcaagatatg aaatacgtag catttgaagg tagagaagag agtttgactg ctcttttagg
      901 aggacgtatt caaatttatt caggaggtat atctgagctt tcggggcagt tagattctgg
      961 aaaatacaga gttttagctg ttctatcaga tcagagactt gatggtaaat ttaaagatat
     1021 ccaaacagca aaagaacaag gatatgacgt agtttggagt acttggagag gatattatat
     1081 gggaccaaaa gttagtaatg cacagtacaa tttttgggta gaaaaattaa aagaactatc
     1141 gcaaaccgat gaatttaaaa aagaacgcga ccttggaggt ttgcagcctt ttactatgat
     1201 aggttcggag tttgaccatt ttgtcaaaag cgaagtcgct aaatttagaa atatggcgcg
     1261 cgaggctggg cttgcaaaat gacagaaaga ttatgtaaag agttatttaa aatctaactg
     1321 atataaaaat agcttaaaga ttgattttag cgatatttga gggtattttt agcaaaatca
     1381 aactaatgaa tttag
//
LOCUS       DAPPKW010000172         1297 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.172, whole genome shotgun sequence.
ACCESSION   DAPPKW010000172 DAPPKW010000000
VERSION     DAPPKW010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.172"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            196..1191
                     /gene="mltG"
                     /locus_tag="RPW04_001993"
     CDS             196..1191
                     /gene="mltG"
                     /locus_tag="RPW04_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012661530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HDX6296065.1"
                     /translation="MRIPFIKVKIKAIIMVIENIKKKRAFLIICEIALILFLSLFATL
                     ARPIDTSKVVYLPNGSVGEIISYLDKRNFNVNKFDKYILVFMGFPQSGWIEIGQNRLS
                     KFDFLYKLTTAKAAMVDITLIPGETTLYFLKDIANELNLDYNRLTHEYNKQSPIKEGY
                     LVPDTYKIPVGISEKHLIYYLINSSKRYHEHISNKIFGEWDEKKWFNFLIIASVIQKE
                     AADAEEMPIVSSVIYNRLKKGMKLQMDGTLNYGLYSHEKVTAERIRKDNTRYNTYIHS
                     GLPLTAVCNVSLDAIKAAIFPRKTDFLYFVRNPKTGKHTFSKSYENHVNEIKKAK"
BASE COUNT          459 a          171 c          207 g          460 t
ORIGIN      
        1 atattttcta tatttatctc tttaaaaagt ctgcctagcc agattgcgtt atctgcgata
       61 tctaaaagct ctttgctgct agatttttcg ctttttttgt tataaatttc aatatttttt
      121 atatttacaa ttagtttttt atctaatttt atatataatt tttctattcg cagtagttcg
      181 gagtcgaagc tatctatgcg aataccattt attaaagtta aaattaaggc aattataatg
      241 gttattgaaa atattaaaaa aaaacgagct tttttaataa tttgtgaaat agcgctcata
      301 cttttcctaa gtctgtttgc aacgctcgct agacctattg atactagtaa ggttgtgtat
      361 cttcctaatg gaagcgttgg cgaaattata tcgtatttag ataagcgcaa ttttaatgtt
      421 aataaatttg ataaatatat tttagttttt atgggatttc cgcagtctgg ctggatagaa
      481 ataggtcaaa atagacttag caaatttgat tttttgtata aattaacaac cgcaaaagcc
      541 gctatggtag atataaccct gattcccggt gagacaactt tgtatttttt aaaagatatc
      601 gcaaatgaat taaatttaga ttacaatcgt ttaactcatg agtataataa acaatccccc
      661 atcaaagagg gttaccttgt tccagatact tataaaattc cagtaggtat aagcgaaaaa
      721 catctaattt attatttgat aaattcatca aaacgttatc atgagcatat aagcaataaa
      781 atatttggcg agtgggatga aaaaaaatgg tttaattttc ttattatagc ttctgtaata
      841 caaaaagagg ctgccgatgc agaagagatg cctatcgtct cttcagtcat ttataacaga
      901 ctcaaaaaag gtatgaagtt gcagatggac ggtacgttaa attatggatt atattcgcat
      961 gaaaaagtaa ctgcggaacg tattagaaaa gataatacta ggtataatac gtatattcat
     1021 agcggattgc cgctaactgc tgtttgtaac gtatctttag atgctataaa agcggcaatt
     1081 tttcctagaa aaactgattt tttatatttt gtaagaaatc caaaaaccgg aaaacatacg
     1141 ttttctaaga gctatgaaaa tcatgtaaat gagattaaaa aggcaaaata atatctcggt
     1201 ttcgtctttt taattgagta tttattaata ctgattttat ttaaatttga atataatcaa
     1261 aaatttaaaa taaattaaaa agtaggcaga tggaagc
//
LOCUS       DAPPKW010000173         1283 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.173, whole genome shotgun sequence.
ACCESSION   DAPPKW010000173 DAPPKW010000000
VERSION     DAPPKW010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1283)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1283)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.173"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..570)
                     /locus_tag="RPW04_001994"
     CDS             complement(<1..570)
                     /locus_tag="RPW04_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HDX6296066.1"
                     /translation="MKIVLATNNKDKVKEIKAFYDGYEIYALNEICEPFEIDETGSSF
                     KENALIKATAVYAKLCALKLENEFIALSDDSGISVEALGFAPGIYSARYSGKDATDAS
                     NRKKLTCELHKLRLKKSGAFYTACIAVASKFGNFSTHGFMYGTVIDEERGDNGFGYDF
                     MFMPDGFDGTIGQLDVKTKLAISHRSKGLE"
     gene            complement(619..1257)
                     /locus_tag="RPW04_001995"
     CDS             complement(619..1257)
                     /locus_tag="RPW04_001995"
                     /inference="COORDINATES: protein motif:HMM:NF020893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HDX6296067.1"
                     /translation="MKNSIFKFIIFIFLIVACFLIFDNLSFEILKNYIESHSKFSAVI
                     YILSWIILPIFMFPAAILALVGGAFFGIAEGLILTMIGVSINSVIMYFLGRFLGKDFL
                     AKFFDIYKFKTAYIKDEFFTIFLLRLIPIIPYNAINYFAGAFAFRFWKFFLGSFFGKV
                     LSSIVFLNLGVNASNVGTAQFWWAVFWVFVLVLVSIGLKLFYGRIFKFVTKF"
BASE COUNT          474 a          253 c          159 g          397 t
ORIGIN      
        1 ttccaaaccc tttgatctgt gagatatggc tagttttgtt ttaacgtcta attgtcctat
       61 ggtcccatca aaaccatcgg gcataaacat aaaatcatac ccaaaaccgt tatcgccgcg
      121 ctcttcgtct ataactgtgc cgtacataaa tccatgtgtg ctaaaattcc cgaatttaga
      181 agctacggct atacaagcag tataaaacgc tccgcttttt ttaagtctga gtttatgaag
      241 ttcacaggta agtttttttc tattgctagc gtcagtcgca tcttttccgc tatatcttgc
      301 agagtaaatt cccggcgcaa aaccgagtgc ttctacactt attccgctat catcactaag
      361 agcgataaac tcattttcaa gctttaaggc gcaaagcttc gcataaaccg ctgttgcttt
      421 tatgagagca ttttctttga aactagaccc tgtttcatcg atctcgaacg gctcacaaat
      481 ctcatttaga gcataaattt cataaccgtc ataaaaggct tttatctctt ttactttatc
      541 tttattattt gttgctaaaa ctattttcac gatttttcct tgaatttaaa aaagtaattc
      601 tactaagaac ggcttaatct aaaatttggt tacaaattta aagatacgac cgtaaaataa
      661 ctttaaacct atagaaacca aaaccaaaac aaacacccaa aaaactgccc accaaaactg
      721 tgctgttcct acattagaag catttactcc taaatttaaa aatacgatac tgctcaaaac
      781 cttaccaaaa aagcttccta aaaaaaattt ccaaaaccta aaagcaaaag ctccggcaaa
      841 ataatttata gcgttataag gaataatagg tataagtcta agtaaaaata tagtaaaaaa
      901 ctcatctttt atataagctg ttttaaattt ataaatatca aagaatttag ctaaaaaatc
      961 cttacctaaa aatcttccta gaaaatacat tataaccgag tttatactga ctcctatcat
     1021 agtcaaaatc aaaccttcag caattccgaa aaacgctccg cccacaagag ctaatatagc
     1081 tgccggaaac ataaaaatag gtaaaataat ccaagatagt atataaataa ctgcgctaaa
     1141 tttagaatga ctttctatat aattttttaa tatttcaaaa ctcaagttgt caaatattaa
     1201 aaaacaagcg actatcaaaa agataaaaat aataaattta aaaatgctgt ttttcatagc
     1261 ttccaatcgt atgtaaaata tat
//
LOCUS       DAPPKW010000174         1107 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.174, whole genome shotgun sequence.
ACCESSION   DAPPKW010000174 DAPPKW010000000
VERSION     DAPPKW010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1107
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.174"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(113..883)
                     /locus_tag="RPW04_001996"
     CDS             complement(113..883)
                     /locus_tag="RPW04_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HDX6296068.1"
                     /translation="MSITVLMYHHVLPKSGFIASSLNEFESQMRFLSQNGYKTLSSDE
                     FLKFKKGELKLPKKSIFITFDDGWRDNYYYAYPILKKYGLNATLFLVTSWIEKASEQN
                     ALRKAEFRPLSHKEAKQKIISDTAGLFLNWDEVEKMKDVFDFHSHTNGHDDAYFGNLR
                     FEDDIFACKKIIKDRLGFDDAHLCWPRGQYDKSRLQAAKEIGYEIFYTTKRGINKPDN
                     NLKYIKRVAVKKDYKWLKKTLFIYQNDILGSFYSALKN"
BASE COUNT          378 a          194 c          139 g          396 t
ORIGIN      
        1 ttattcaaaa aaacctatat tgcgttcctt gcggaaaaga tggttgtaat ggctcaaaaa
       61 ggagcgattg tcttataaat ttagatttaa atttaataaa aaacagcata tctcaattct
      121 tcaaagccga gtaaaagctt cctaaaatat cattttgata tatgaatagc gtctttttta
      181 accacttata atctttttta actgcaactc tttttatata ttttaaatta ttgtcaggtt
      241 tatttatacc tcgttttgtg gtataaaata tctcataacc gatctctttt gcagcttgta
      301 atctgctttt atcatattgc ccgcgcggcc aacaaagatg ggcgtcatca aatcctaaac
      361 gatcttttat gatcttttta caagcaaaaa tatcatcttc aaatcttaaa tttccaaaat
      421 aagcatcatc gtgtccatta gtatgagagt gaaaatcaaa aacatctttc attttttcca
      481 cctcgtccca gtttaaaaac aaaccagcag tatcgctgat aattttttgt tttgcttctt
      541 tatgcgataa cggtctaaac tcagcttttc taagtgcatt ttgctcactt gctttttcta
      601 tccagctagt cactaaaaac agagtcgcat ttaaaccgta ctttttcaaa ataggataag
      661 cgtagtaata attatctcgc caaccatcat caaaagttat aaaaatactc tttttaggta
      721 gtttaagctc acctttttta aatttcaaaa actcatctga acttaaagtt ttataaccat
      781 tttgactaag aaacctcatt tgagactcaa attcattaag actgctagcg ataaatcctg
      841 attttggcaa aacatgatga tacataagaa cggttatact catatctaat ctttttataa
      901 taaaaaaaat agtattctta caaaaaacag aggttgaatt tgtacgttat atactacttt
      961 ttactatatc cttttttatt gattttagca ttttttcgca aaaaaacaga taaaatatta
     1021 attattcaaa cagccaaaat cggagattat gccaactcta caatcatttt tggcgaagct
     1081 agcagcacta aaggcggtaa atttgat
//
LOCUS       DAPPKW010000175         1082 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.175, whole genome shotgun sequence.
ACCESSION   DAPPKW010000175 DAPPKW010000000
VERSION     DAPPKW010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.175"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..140)
                     /locus_tag="RPW04_001997"
     CDS             complement(<1..140)
                     /locus_tag="RPW04_001997"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296069.1"
                     /translation="MIEESNKTIEQIARESLHSLEMTFENFAIFGVCSLMIIGIVTAL
                     ILS"
     gene            complement(334..>1082)
                     /locus_tag="RPW04_001998"
     CDS             complement(334..>1082)
                     /locus_tag="RPW04_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009495786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HDX6296070.1"
                     /translation="KNFKKSDGSLVFKNKMNSILFPVNFTARDYDIFFTICWFAKQKG
                     YVENRGFIEMPYSEICRFMPSGLNKTRFNDEVKNFRSKVLGQNGAAIYRSVEITKDDE
                     ITTVGVFFTDIKIFRNKQSLSFRLNPIALDVLFSTLKFMRIDLNDFVSIRGKFAKTLY
                     RLLHQYDNIKADKDGFKCVNFSRDDFEKFMSTPMTYNVTDLDRFVIKPSISELDESYF
                     KKIIFEKKIADGSKKNVIGYSFKFILKDAS"
BASE COUNT          382 a          185 c          127 g          388 t
ORIGIN      
        1 gacaatatga gagctgtaac tattcctatt atcataagtg agcaaacgcc aaatatagca
       61 aaattctcaa atgtcatttc taaagaatgc aaactttctc ttgctatttg ctctatggtt
      121 ttattacttt cttctatcat tttcaatcat attcaaccaa gttattcaaa aagctcaatc
      181 caaatttttg taaaaacaac acctaataag aatgcaataa cgtacattgc aagaaatcct
      241 actaactcgt ccataatcaa taattcctta ttagtcttaa tttgtaagct ctgtatttta
      301 tggcaattta ttatttatta ttatatccat tctctatgaa gcatctttta aaataaattt
      361 aaaagaatag ccgataacat ttttctttga gccatctgct attttctttt caaaaataat
      421 ctttttaaaa tagctttcgt caagttcgct aatggatggt tttattacaa agcgatctag
      481 gtcggtgaca ttataggtca taggagtgct cataaatttt tcaaaatcat ctctactaaa
      541 atttacacat ttaaaaccat ctttgtcggc tttgatgtta tcatattgat gtagcaagcg
      601 atacaacgtc ttagcaaatt taccacgaat ggagacaaag tcgtttaaat ctattctcat
      661 aaatttaaga gtactaaata aaacatcaag agcgatagga tttaatctaa agcttaaaga
      721 ttgtttattt ctaaaaattt ttatatcagt aaaaaatacg ccaacagtag ttatttcatc
      781 atctttggta atttcaacac ttctataaat ggcagcacca ttttgcccca ataccttaga
      841 tctaaaattc tttacttcat cattaaatct agttttattc aagccagacg gcataaatct
      901 acaaatttca gagtaaggca tttctatgaa gcctctattt tcaacatatc ctttttgctt
      961 tgcaaaccaa caaatcgtaa agaatatgtc ataatctcta gctgtaaaat taacagggaa
     1021 aagaatagaa ttcatcttat ttttaaaaac aagagaacca tctgattttt tgaaattctt
     1081 tt
//
LOCUS       DAPPKW010000176         1038 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.176, whole genome shotgun sequence.
ACCESSION   DAPPKW010000176 DAPPKW010000000
VERSION     DAPPKW010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1038)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1038)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1038
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.176"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..407
                     /locus_tag="RPW04_001999"
     CDS             <1..407
                     /locus_tag="RPW04_001999"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296071.1"
                     /translation="TSSYFTLSEQLQIAIKTLQKGNIEKYSDVALHLCKKLCRLYINE
                     LKDLMGHSSYNLDYSDQKLFHDLHSIDDSSEYIATLEIFAEFANELEKIDENSISENN
                     QILEKYGTEWLKKSIDDMSLISDYIETLRKKA"
     gene            404..>1038
                     /locus_tag="RPW04_002000"
     CDS             404..>1038
                     /locus_tag="RPW04_002000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296072.1"
                     /translation="MKKIIFYLLSMISFAFADIYNEIENKVLQFVKNDEFLYKDEDEF
                     GFKIENKDEVAIFKIENYVDNEFKPHSDILNLKLSIINKKINKINPKSIAFDELRLNK
                     LELQNEINKLQENRAKLKKDASGEYYKKNFAMAHKAAFGSIVPIDHSSPIKDYTTTGA
                     FLDGYYSFCMYIFMWSDSLHNNFKEKKYKLNYTELFDANTLKRIAEEEGGF"
BASE COUNT          426 a          107 c          169 g          336 t
ORIGIN      
        1 aaactagtag ttattttaca ctatcagaac aattacagat agctataaaa actcttcaaa
       61 aaggcaatat agaaaagtat tcagatgttg cattacatct gtgcaagaag ctttgcagac
      121 tttatattaa tgaattaaaa gatcttatgg gtcatagttc atataattta gattatagcg
      181 atcaaaaatt atttcacgat ttacatagta ttgatgatag tagtgagtat atagcaactt
      241 tggagatttt tgctgagttt gctaatgagc tagagaaaat agatgaaaat tcaataagtg
      301 aaaataatca aattttagaa aaatatggta cagaatggct aaaaaaatca attgatgata
      361 tgagtttaat ctctgattat attgaaacat taaggaaaaa agcatgaaaa aaataatatt
      421 ttatctgctt agcatgattt cttttgcttt cgcagatatt tataatgaga tcgaaaacaa
      481 ggttttgcaa tttgtcaaaa acgatgaatt tctttataaa gatgaagatg aatttggttt
      541 taaaatagaa aataaagatg aagttgctat atttaaaata gaaaattatg tggataatga
      601 attcaaacct catagtgata ttttaaattt aaaactatca ataataaata aaaaaataaa
      661 caagatcaat ccgaagtcta tcgcatttga tgagctaaga ttaaataaat tggaattaca
      721 aaatgaaatt aataagctac aagaaaaccg agcaaaacta aaaaaagatg ctagtggcga
      781 gtattataaa aaaaatttcg caatggccca taaggcagct ttcggtagta tagttcctat
      841 agatcactcc agcccgatta aagattatac aacaactggt gcatttttgg atggatatta
      901 tagtttttgt atgtatattt ttatgtggtc tgattcatta cataataatt ttaaagaaaa
      961 gaaatataaa ctgaattata ctgaattatt tgatgctaat actttaaaaa ggattgcaga
     1021 agaagagggt gggtttag
//
LOCUS       DAPPKW010000177         1035 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.177, whole genome shotgun sequence.
ACCESSION   DAPPKW010000177 DAPPKW010000000
VERSION     DAPPKW010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.177"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(149..>1035)
                     /locus_tag="RPW04_002001"
     CDS             complement(149..>1035)
                     /locus_tag="RPW04_002001"
                     /inference="COORDINATES: protein motif:HMM:NF017870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF945 family protein"
                     /protein_id="HDX6296073.1"
                     /translation="KSSNLDFKLQILPINFQDEYSRLISDKIIFDVSLNGNKISKISF
                     FGDDIKFSQSGLFVQLLNLEYSISYPSEINFADFDKYGIFDNNSKLNLSKVLVNSGLI
                     GFNIDDISIISNLKTNNGIFDSNLNLDIKSLDSSGLSLNNINLITSVSSIDMEACRYI
                     IEAATNNSSISDIENKLLDIVKRDPKFDITNFSFESKDGDKFAFDFSFWFDNARNMIK
                     PKDILNYSNFTGNLITTNRLSSVSPWLLMTKSYEDYLIENGILIESGNGYKADFELSK
                     NKDDIIFNSLVPLNSVLR"
BASE COUNT          371 a          152 c          141 g          371 t
ORIGIN      
        1 ggatttctaa ctagaagagt taaaaggtct ttcccgtttc gtgagttgga attatacaag
       61 agtagtgctt aaaggaggct taaaattatg agtaaatttg agagagatga aaaaagtggg
      121 gaggggatgg gacgaatccc aacaaatatc aacgaagtac cgagttcaaa ggcactaaac
      181 tgttaaatat tatatcatct ttatttttgc ttagctcaaa atctgcttta tagccatttc
      241 cagactcaat caaaataccg ttttctataa gataatcttc ataagatttc gtcattaaaa
      301 gccatggaga tacgctagat aacctatttg tagtaattaa atttccggtg aaatttgaat
      361 aatttaaaat atcttttggt tttatcatat ttcgtgcatt atcaaaccaa aatgaaaaat
      421 caaacgcaaa tttatctccg tctttgctct caaaactaaa attagttata tcaaattttg
      481 gatctctttt aactatatct aatagtttat tttctatatc ggatatcgag ctattgtttg
      541 ttgcggcttc tataatatac cgacaagctt ccatatctat cgagcttacg ctggtaatta
      601 aattaatatt atttaaactc aaaccgctac tatctagcga ttttatatct aaatttaaat
      661 ttgaatcaaa aataccatta ttggttttta aattactaat aatagaaata tcgtctatat
      721 taaaaccgat gagtcctgaa tttaccaata ctttagacaa gtttaattta gaattattat
      781 caaatatacc atacttatca aaatcggcaa aatttatttc gctcggataa cttatagagt
      841 attctaaatt taaaagctga acaaaaagtc cgctttgtga aaattttata tcatctccga
      901 aaaatgatat tttactgatt ttattgccgt ttaaacttac atcaaaaatg attttatcac
      961 taataagccg actatattca tcttgaaaat ttataggaag tatttggagt ttaaaatcta
     1021 aatttgaact tttta
//
LOCUS       DAPPKW010000178         1019 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.178, whole genome shotgun sequence.
ACCESSION   DAPPKW010000178 DAPPKW010000000
VERSION     DAPPKW010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1019)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1019)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1019
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.178"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..>1019
                     /locus_tag="RPW04_002002"
     CDS             <1..>1019
                     /locus_tag="RPW04_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDX6296074.1"
                     /translation="TKSFLYLLGALLGKNEYKIYVYFENDYMVGDKKISQIIDKMGAT
                     FIYFKPKNRICKMKREILRVFSKKLLDKVLYTNDLKFAFDLLKSLSIHAVHLNNHFST
                     NLAYNEAANLLGIKVIQHLRKNSKIEDFKLSKLKKLNFLAISVSNSTYDFYANQIEIS
                     KNIVYNPVICSGLTTNKHSDNSDISIIMPANFLSLKGHSLVFDAFLSLKRDDIKLYLA
                     GGEVDKKLIQKLQVLEKQGKVKYLGFVKNMDKIYAKSDYILGFSSDEGLPRVVIEGLS
                     IGLGVIYSDIPVIREIYNISSNKDNFHIVKRDSVSLLECLKKLKKPTSKEPDMSIISN
                     FSLEN"
BASE COUNT          371 a          122 c          174 g          352 t
ORIGIN      
        1 acgaaaagtt ttttatatct tttaggtgct ttattaggca aaaatgagta taaaatttat
       61 gtatattttg aaaatgatta tatggttggt gataaaaaaa tatcgcagat aatcgataaa
      121 atgggtgcta cttttatata ttttaagcct aaaaatagga tttgtaaaat gaaaagagag
      181 attttaaggg tgttttcgaa aaaacttttg gataaagttt tgtatacaaa tgatctaaaa
      241 tttgcttttg atctgctaaa aagtctgagc atccatgccg tgcatcttaa caatcatttt
      301 tcaacgaatt tggcttacaa tgaagctgca aatttgcttg gcataaaagt tatccagcat
      361 ttaagaaaga attcaaaaat agaagatttt aagctatcca agctgaaaaa actcaatttt
      421 ttagctatta gcgtttcaaa ttcaacttat gatttttacg ctaatcagat agaaatttct
      481 aaaaatatcg tttataatcc tgttatttgt agcggtttaa ccacgaataa acactcggat
      541 aattctgata tttctatcat tatgccggca aatttcttga gtcttaaagg acacagcctt
      601 gttttcgatg cttttttgag tttaaaaaga gatgatatta agctttatct agcaggaggc
      661 gaagtggata aaaaacttat ccaaaaactt caggtgttag aaaaacaagg taaggtaaaa
      721 tatcttggtt ttgtaaaaaa tatggataaa atttatgcaa agagcgatta tattcttgga
      781 ttttcaagtg atgagggatt gcctagagtt gttatcgaag gacttagcat cggacttgga
      841 gtgatatatt ctgatatacc agttatcaga gaaatttata atatttcgtc aaataaagat
      901 aattttcata tagtaaaacg cgatagtgtt tctttgttag aatgtttgaa aaagcttaaa
      961 aagccaacat ctaaagaacc agatatgtct ataatatcta atttcagttt ggaaaacta
//
LOCUS       DAPPKW010000179         1000 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.179, whole genome shotgun sequence.
ACCESSION   DAPPKW010000179 DAPPKW010000000
VERSION     DAPPKW010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 1000)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1000)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1000
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.179"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            524..1000
                     /locus_tag="RPW04_002003"
                     /pseudo
     CDS             524..1000
                     /locus_tag="RPW04_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732157.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein"
BASE COUNT          405 a          135 c          164 g          296 t
ORIGIN      
        1 caaagttata gcgattatag ctattttaat ggcgatgctt attgtcctat ttgtcacttt
       61 agaaattttt atttctaaag tcaatttatc tttcaaagaa attaatagta tatcagatag
      121 acaagagctg ctatataaaa atattattaa tggcgaaaga accggtttga ccgtaaggca
      181 actgtatata gatataaatg ataaagatgc tttagatatt ttagaagcta caatgaaaga
      241 ttttgaagtt gttagaaata agtataaaga gctgtctgga ggccccgcaa acgctgctaa
      301 tcaatcagat aagttattgt ttatacaaaa cgatatatta caaggagcca aaaaaggcga
      361 aaaagtcaca atcacggatt tagaagatct aacccctaca tggagatcat atagatctgt
      421 tttagaaaaa cgacttgaaa aactcggcga agacaattta aaagctaata ataaccttgc
      481 tagtgatata agcgtactta ctatgggatt taccgtattt atcatcacta tcatcatact
      541 ttcaagtttg atactattaa ttagcaaatc atatcttcta aaagctatta aatctataga
      601 aaacggtctc aaagacttct ttgacttctt aaaccataaa aatgataatc ctaaagctat
      661 aagcttaaaa tcaaatgatg agtttggagt tatggctaaa cttataaacg ataatacatc
      721 taatataaaa gattctatgg aacaagacaa taaagcagta aaagagtctt tggaaaaagc
      781 aaatgaagtt gagaatggaa atttaaaagc taggataaat actataccat cttcacctgg
      841 acttgagaag ttaagacaag tattaaataa gatgttagat acgttagaaa gaaaaatagg
      901 aagcgatata aatgttattc aacaaacatt tgatagtttc aaagagttag attttacatc
      961 aagaattcca aacgctaaag gtgaagtcga aagagtaaca
//
LOCUS       DAPPKW010000180          985 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.180, whole genome shotgun sequence.
ACCESSION   DAPPKW010000180 DAPPKW010000000
VERSION     DAPPKW010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..985
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.180"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            235..624
                     /locus_tag="RPW04_002004"
     CDS             235..624
                     /locus_tag="RPW04_002004"
                     /inference="COORDINATES: protein motif:HMM:NF014763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDC sensor domain-containing protein"
                     /protein_id="HDX6296075.1"
                     /translation="MISSIEHLSNIIESDNQDYMNENTEFLLSTIDKTSNLTLIYMVL
                     DNNGMMYSTGGIKGLLASTFDARERKRYTSAKNANKLIITEPYTNAYNNLVSISAVKP
                     IYIKGKFIGVLGADMDNVAFKSLVNYL"
     gene            778..985
                     /locus_tag="RPW04_002005"
                     /pseudo
     CDS             778..985
                     /locus_tag="RPW04_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731727.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          410 a          132 c          139 g          304 t
ORIGIN      
        1 aaatcaatta aataaacgac aattatggta attttaaaaa atcctctttt ataagcagca
       61 gtatagcaaa taaaataaca cttagcgtag ctggtatatt tataattatt ttaactgttc
      121 tatcctatat aaattacaaa gattcgcaaa ttaaaataat acatctagtc gaaaacgaaa
      181 gaaaaaagat cggtagaagg cagtaagcta ataccgaaaa acaagagaaa tagattgatt
      241 tcaagtatag agcatctatc taatattata gaatcagata atcaagacta tatgaatgaa
      301 aatacagaat ttttattatc tacgatagat aaaacttcaa atttgacact tatatatatg
      361 gtattagata ataacggaat gatgtatagc acaggaggta taaaaggact tctggcttct
      421 acttttgacg caagagaaag aaaacggtat acaagtgcaa aaaatgcaaa caaactcata
      481 ataaccgagc cttacacaaa cgcatataat aatcttgtat ctataagtgc ggtaaaacct
      541 atctatataa aaggtaaatt tataggcgta cttggtgcag atatggataa tgtagcattt
      601 aagagtctag tgaattattt ataaacaatg acttagacgc taaattttta cagatcagac
      661 aaactcaatt ataaaaaagc atcggccttt aatatcatat ctattattat ttcatcactg
      721 atagtttggt ttgttataaa actaaatttc aaaccgttaa ataagatagt atatcgtctc
      781 aaaaacttct ttgacttctt aaaccataaa aatgataatc ctaaatactc ttcaaggcaa
      841 gataggatct gatataaatg ttattaaaaa aacatttgat gattttaaaa atcttgattt
      901 tacctctaat atacctaatg ccaaaggaga ggttgaaaag gttactaatc ttttaggtaa
      961 tgagataact aatatacgcg atata
//
LOCUS       DAPPKW010000181          983 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.181, whole genome shotgun sequence.
ACCESSION   DAPPKW010000181 DAPPKW010000000
VERSION     DAPPKW010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 983)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 983)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..983
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.181"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            81..365
                     /locus_tag="RPW04_002006"
     CDS             81..365
                     /locus_tag="RPW04_002006"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296076.1"
                     /translation="MHKILFFSLIAMLFTACGEFKLPELPKIQKSSEPTEAECAKIVK
                     KYKELRSRGYVGNEPSLERDYSLEANYCEKKYTYSPSTDEMIKNIEKLGN"
     gene            403..747
                     /locus_tag="RPW04_002007"
     CDS             403..747
                     /locus_tag="RPW04_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016646369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HDX6296077.1"
                     /translation="MTQVAKISKTPILTKDDILEYLSQIKPLLKKDGIKEIGLFGSYV
                     IGEEEANSDVDLVVLAEKEMLDRLKGIDCILYFENLREKISRDLNKSVDLIKVFSKEK
                     LNHNILKDAIYV"
     gene            740..>983
                     /locus_tag="RPW04_002008"
     CDS             740..>983
                     /locus_tag="RPW04_002008"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296078.1"
                     /translation="MYSKKTLNRLKEAVKQIEDIEKMVKAKNGVNNLLEDELFGRKAV
                     MKSFDIMAEQFEKIKNSDDSSLLAEPTIEKDYLGLKG"
BASE COUNT          438 a          110 c          167 g          268 t
ORIGIN      
        1 agctaaataa tcaaaaagga ttagaatatt ttaaaaataa tgttataatc ccaaaaacat
       61 aaaacagcaa aggatacaga atgcataaaa ttttattttt tagcttgatt gcaatgttat
      121 ttacggcttg cggtgaattt aagttaccag agcttccaaa aatacaaaaa agctctgaac
      181 caactgaagc agaatgtgca aaaatagtaa aaaaatacaa agaactaaga agtcgaggtt
      241 atgtaggaaa cgaaccttca ctagaaagag attattcgct tgaagcaaat tattgtgaga
      301 aaaaatatac atatagccca tctacagatg agatgataaa aaatatagaa aagttaggca
      361 attaaaggat aaatcatgcc aaccttagca ataactaacg aaatgacaca agtagccaaa
      421 atttctaaaa ctcctatttt aacaaaagat gatatactag agtatttatc gcaaataaaa
      481 ccacttctta aaaaagacgg cattaaagaa ataggcttgt ttggaagcta tgttattgga
      541 gaagaagagg caaattctga tgttgattta gtagttcttg cagaaaaaga gatgttagat
      601 aggctaaaag ggatagattg catcttatat tttgaaaatt taagagaaaa aatatctaga
      661 gatttaaata aatcagttga tttaataaaa gttttttcaa aagaaaaatt aaatcataat
      721 attttaaagg atgccattta tgtatagtaa aaaaacactt aacagactaa aagaagccgt
      781 aaagcaaatt gaagatatag aaaaaatggt aaaggctaaa aatggagtaa ataatttact
      841 agaagatgag ctttttggaa gaaaagctgt aatgaaaagc tttgatatta tggcagaaca
      901 atttgaaaaa attaaaaatt cagatgatag cagtttactt gcagagccta caatagaaaa
      961 ggattattta ggcttaaaag gca
//
LOCUS       DAPPKW010000182          974 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.182, whole genome shotgun sequence.
ACCESSION   DAPPKW010000182 DAPPKW010000000
VERSION     DAPPKW010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..974
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.182"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..862
                     /locus_tag="RPW04_002009"
     CDS             <1..862
                     /locus_tag="RPW04_002009"
                     /inference="COORDINATES: protein motif:HMM:NF012745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDX6296079.1"
                     /translation="LTNIKDKINSNFEYEIIFIDDGSQDKTALEIKKLCNKFNNTHLI
                     KFSRNFGKEAAILAGFRMAKNSSIVLIDVDLQHPVYLIEKMYEIWYSNEADIIYAIRK
                     DRKGESFLKSRLSEIFYKISNIISDVKLKPGVSDFRLMDKKVVDILVAMNEYHRFSKA
                     MFEWVGFKKIALEYDYAPRINGKTSWSYMKLFKYAVEGMISFSTTPLKISFWIGLMIS
                     FISGTYGIFIVFDTIINGNTVKGYPSMLTIILFLGGIQLIFLGIIGQYIARIYEQLKD
                     RPHYIVEEEI"
BASE COUNT          388 a          108 c          162 g          316 t
ORIGIN      
        1 attaacaaat atcaaagaca aaataaactc aaactttgaa tatgaaatta tttttataga
       61 tgatggaagt caagataaaa cagctttaga aataaaaaaa ttatgtaata aatttaataa
      121 tactcacctt attaaatttt cgcgtaattt tggtaaagaa gccgctattt tagcaggttt
      181 tagaatggca aaaaatagca gcatagtctt aatagacgta gatctacaac atcctgtata
      241 tctgatagaa aaaatgtatg aaatttggta tagcaatgaa gcagatatca tctatgctat
      301 aagaaaagat agaaaaggtg aaagcttttt gaaaagcaga ctaagtgaaa tattttataa
      361 aatttcaaat ataatctcag acgtaaaatt aaagccgggg gtaagcgact ttagattaat
      421 ggataaaaaa gttgtcgata tcttagtagc aatgaatgaa tatcatagat ttagcaaagc
      481 catgtttgag tgggtaggat ttaaaaaaat agcgttagaa tatgattatg ccccaagaat
      541 taacggtaaa actagctgga gttatatgaa gttatttaaa tatgccgtag aaggtatgat
      601 aagtttttcg actacacctc taaaaatatc attttggata gggttgatga taagttttat
      661 atccggaact tatggaattt ttatcgtttt tgatactatc ataaatggaa ataccgtaaa
      721 aggctaccct tcaatgctta ctataatact atttttagga ggaatacagc taatattttt
      781 aggaattata gggcaatata ttgcaagaat ttatgaacaa ttaaaagata gaccgcatta
      841 tatagttgaa gaggagattt agcacagtga atttaaaaca aactttaaaa aaagagctac
      901 tatttgttat agcaactgtt aaaaattttt tcaagtataa ccacttctat aaatatttta
      961 ttttcatttt tggg
//
LOCUS       DAPPKW010000183          931 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.183, whole genome shotgun sequence.
ACCESSION   DAPPKW010000183 DAPPKW010000000
VERSION     DAPPKW010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 931)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 931)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..931
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.183"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            130..894
                     /locus_tag="RPW04_002010"
     CDS             130..894
                     /locus_tag="RPW04_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002945109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDX6296080.1"
                     /translation="MNKIKEILSLTKFDFKQRYNSTNLGSLWYLVTPLVMIFIYTVIF
                     SDFMNARLGINSDKWSYSLYLVPGLFSFAAFQNTILNICDVPTQKAGVLKKISIPLYA
                     FEISPTIIQIIIFSISMILGVIFLSIVSNLNVQILLIIPMMILQSIFAFALGVILSIL
                     SIFIKDIKEGLPIFLQLLFWATPIVYPYQIIEQKLPILLEINPLYYFIKFYQKIFLSK
                     NVEYSDFITPFILSMITLLIAAYIYKKLISAIKDMY"
BASE COUNT          319 a          135 c          112 g          365 t
ORIGIN      
        1 aataaaatta aacaagcttt ttcagtaagt atttctttta atctcaatat atttatatcc
       61 atagttatta tctgatttta atctctttta tagtaaaatc accataaatt tgaaaattat
      121 ggggatgttt tgaataaaat aaaagagata ttatcattaa ctaaatttga ttttaaacaa
      181 cgatataatt caacaaatct cggctccctt tggtatcttg tcactccgct tgttatgata
      241 tttatatata cggtaatttt ttcagatttt atgaatgcaa gacttggtat caatagtgat
      301 aaatggtcat atagtttata tttagttcct gggttattct catttgcagc attccaaaat
      361 actattttaa atatatgtga tgttccgact caaaaagctg gagttcttaa aaaaatcagc
      421 attccactat atgcatttga aataagccca acgataatcc aaataattat attttctatc
      481 tcaatgatcc ttggggtaat atttttatct attgtttcca atctgaatgt tcaaatttta
      541 cttatcattc ctatgatgat tttacaaagt atatttgcat tcgctcttgg agttatatta
      601 tctatcttgt ctatatttat aaaagatatt aaagagggtt tgcctatatt cttgcagcta
      661 cttttttggg caactcctat agtatatcct taccaaatca tagaacaaaa gttgcctata
      721 ctccttgaaa taaacccgtt gtattatttc atcaaatttt atcaaaaaat atttttatca
      781 aaaaatgtcg aatactcaga ttttattact ccatttatac ttagtatgat aacgcttttg
      841 atagctgctt atatctataa aaagcttata tcagcaataa aggatatgta ttgaatgctg
      901 ttttggaagt aaaaaacctc acaaaaatat t
//
LOCUS       DAPPKW010000184          928 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.184, whole genome shotgun sequence.
ACCESSION   DAPPKW010000184 DAPPKW010000000
VERSION     DAPPKW010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 928)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 928)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..928
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.184"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..>928)
                     /locus_tag="RPW04_002011"
     CDS             complement(<1..>928)
                     /locus_tag="RPW04_002011"
                     /inference="COORDINATES: protein motif:HMM:NF025622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosyltransferase domain-containing protein"
                     /protein_id="HDX6296081.1"
                     /translation="VNYGDDYHRATYGDFGFQIWSRFSSEFLSKIFHISLNRNVEISP
                     LLQIIAIAILSIGSMILVKTILKKYNFWGLAASLPLGLSPFFLENMSFKFDSVFMAIS
                     LVSPIIPFLFLKNKIAFFIISILCLELTLTTYQTGNAVYIMLSLFIILSYILEGKDYK
                     QIIKCAMLLILAYISSLLIYKFFILNESSGEWYASKSTFELNNLIPGVSKNLKTVLKI
                     YEDVFKHTIFVPIFALGIIGFLFACIKVSKICRFWTLIASLGFIISGILLSYGAYLVL
                     EKQIFSDRTFNGIGMFLAIIFVFLFKIDIKIYK"
BASE COUNT          376 a          142 c           97 g          313 t
ORIGIN      
        1 acttatatat ttttatatct attttaaata aaaatacaaa tataattgct agaaacatac
       61 ctataccatt aaaagttcta tcactaaaaa tctgtttttc taataccaaa taagccccat
      121 aagataataa aattccagag attataaatc ctaaactagc gataagagtc caaaatctac
      181 atattttaga tacttttata caagcaaata aaaatccaat tatcccaagt gcaaatatag
      241 gtacaaaaat agtatgttta aaaacatctt catatatttt cagtaccgtt tttaaatttt
      301 tacttactcc tggaatcagg ttatttagtt caaatgtgct ttttgatgcg taccattctc
      361 cggaagattc atttaaaata aaaaacttat atataagaag tgatgaaata tatgccaata
      421 taagcaacat agcacattta ataatctgct tataatcttt accttctaat atataactca
      481 atattataaa taaagataac attatataca ccgcatttcc tgtttgatat gtggttaagg
      541 tcaattctaa acacaaaata gatattataa aaaatgctat tttatttttt aaaaatagaa
      601 aaggaatgat tggtgaaact aatgatatcg ccataaacac actatcaaat ttaaaactca
      661 tattttctaa aaaaaatgga ctaagcccca aaggtaggct agcagcaagt ccccaaaaat
      721 tatatttttt taaaatagtt tttactaaaa tcattgatcc gatagacaag atagcaattg
      781 cgattatctg taaaagagga gatatttcca catttctatt taaacttata tgaaatattt
      841 ttgataaaaa ctctgatgaa aatctgctcc atatctgaaa tccaaaatct ccatatgtag
      901 ctctatgata gtcatcgcca taattaac
//
LOCUS       DAPPKW010000185          920 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.185, whole genome shotgun sequence.
ACCESSION   DAPPKW010000185 DAPPKW010000000
VERSION     DAPPKW010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.185"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..572)
                     /locus_tag="RPW04_002012"
     CDS             complement(<1..572)
                     /locus_tag="RPW04_002012"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296082.1"
                     /translation="MDKNSSCKCLKNIIDKFKRLRNIAIFLVVIIIGLISITLYKESV
                     LTELYRDLNTVCGVALAVIAFIAYIEISKELKESNQEIDIFIEKIDKNGIKKKFKLPI
                     TIKRKYFTRAELLGILGGFHSKPHYSIRYTTKKEFFENIKNVQDVKENKITIFVDSSK
                     PTIDKSDDEPITNKEGNDKFDWEPNDSSMT"
BASE COUNT          293 a          130 c          111 g          386 t
ORIGIN      
        1 tctgtcatac tactgtcatt tggttcccag tcgaatttat cattaccttc tttatttgtt
       61 ataggttcgt catcgctttt atcaatcgta ggtttgctac tatctacaaa aattgttatt
      121 ttattttctt ttacgtcttg tacgtttttt atattttcaa aaaattcttt ttttgttgta
      181 tatcgtatag aataatgtgg tttggagtga aatccaccta gaattccaag tagttcagct
      241 ctagtaaaat attttcgctt aatcgttata ggtagtttaa atttcttttt gattccgttt
      301 ttatctattt tttcaataaa aatatctatc tcttgattgc tttcttttag ttccttgctt
      361 atttcaatat aagcaataaa agctatcaca gcaagtgcaa ctccgcaaac cgtattaaga
      421 tctctataca attctgttaa tacggattct ttatataatg ttatagaaat caaacctata
      481 atgattacaa ctaaaaaaat agctatattt cttagacgtt tgaacttatc tataatattt
      541 tttaagcatt tgcaagaact atttttatcc attcaaccct ccttttttat aaaaaaccat
      601 gacattttgt tttttataaa tttatgttta aatttaacta ttttactcaa taaaatatta
      661 atataaaatt aaaatattaa ataaatatat ttttaaatct atgtttaaat atggtaatta
      721 ttttttggaa tttgccggta ttaaaactat actttttatt tatcggattt agttaatcta
      781 cgcgatttta tttaaattta aaaatgtata tgataagata aaaatataat ttttgattaa
      841 tagaatttgg tgacccctac gagactcgaa ctcgtgttac cgccgtgaaa gggcgatgtc
      901 ctaaccgcta gacgaagggg
//
LOCUS       DAPPKW010000186          913 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.186, whole genome shotgun sequence.
ACCESSION   DAPPKW010000186 DAPPKW010000000
VERSION     DAPPKW010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 913)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 913)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.186"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..570
                     /locus_tag="RPW04_002013"
     CDS             <1..570
                     /locus_tag="RPW04_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDX6296083.1"
                     /translation="HFGNLFLSLNTMTSNFSGVPLAFAFIILMGANGAINLLFKDLGI
                     DFVIDIYGSVGINLVYIYFQIPLAILLLYPAFNVLDKQSSESSDILGASRAIYWLKVA
                     IPIMMPSIIGVFIVLFANAVGAYATIYALSSGNFNVVPVRIASLIAGDIDLNPYLASA
                     LSVMLFCLMFIIALMLFYVSNLFNYKRQI"
     gene            567..>913
                     /locus_tag="RPW04_002014"
     CDS             567..>913
                     /locus_tag="RPW04_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDX6296084.1"
                     /translation="MSRLSKIYHYSIVLVLFLIIVLPMAATFIYSISSSWSSNILPDG
                     FSISHYKELLSDPRFLKALLNSLLVCFAAIFLAILFLFPVVFCANFYFLNLKNVMSFI
                     SVLPFAIAPIVLST"
BASE COUNT          239 a          141 c          166 g          367 t
ORIGIN      
        1 cattttggga atttattttt gtctttaaat acgatgacta gcaatttttc aggagttcct
       61 ctagcctttg catttatcat tttaatgggt gcaaacggcg ctataaatct gctttttaag
      121 gatttgggaa ttgattttgt tatcgatata tacggaagcg tagggataaa cttagtatat
      181 atttactttc aaattccact tgctatcttg ctattgtatc ctgcgtttaa tgttttagat
      241 aaacaaagca gcgaatctag cgatatacta ggagctagca gagctattta ttggctaaag
      301 gtcgccatac ctattatgat gccctctata atcggagttt ttatagtatt gtttgcaaat
      361 gcggttggag cttacgctac tatttatgcc cttagcagcg gaaatttcaa tgtagttccg
      421 gtgcgaatag cgtctttgat agccggagat atcgacttaa atccgtattt agctagtgcg
      481 cttagcgtta tgctgttttg tttgatgttt atcatagcgt taatgctgtt ttacgtgtca
      541 aatttattta attacaagag acaaatatga gtagattatc gaaaatttat cattatagca
      601 ttgttttagt gttatttctt atcatagttt tgcctatggc ggctactttt atatactcga
      661 tatcctcaag ctggtcatca aatattttac cggacggatt tagtatttct cattataaag
      721 agcttttaag cgatcctaga tttttaaaag cacttttaaa ctcgctttta gtatgttttg
      781 cggcgatatt tttagctatt ttatttttgt ttccggttgt attttgtgca aatttttact
      841 ttttaaattt aaaaaacgta atgagtttta tatctgtttt accgtttgcc attgctccta
      901 tcgtgcttag cac
//
LOCUS       DAPPKW010000187          910 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.187, whole genome shotgun sequence.
ACCESSION   DAPPKW010000187 DAPPKW010000000
VERSION     DAPPKW010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 910)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 910)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.187"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..>910
                     /locus_tag="RPW04_002015"
     CDS             <1..>910
                     /locus_tag="RPW04_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010404288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase family protein"
                     /protein_id="HDX6296085.1"
                     /translation="VKKVKSIKDKSRPIINMDSPTANELKKRILEHGNLYAYQKEFLQ
                     SNDTFRIVLKSRQIGFSYVSSADALIGAVAGRDQLFLSASEEQALILMRYMRHWAKEY
                     GISFKKDSEHEVVLENGAYIKSFANNFRTVQGFAGDIWMDEFAWYPNPKRIWHAFVPS
                     IGAIKGRLTILSTPFEERSLFHQIYSDKTKFHMFKRFCVSIYKAIEDGLDFDLETMRD
                     LFDTDTWASAYECQFVDDESSLLSISLIKSCVDNKAHYFTPKSSECIYAGYDVGRVSD
                     RSTLAGVVLENGVYKTALMDILAKARF"
BASE COUNT          298 a          142 c          208 g          262 t
ORIGIN      
        1 gtaaaaaaag taaaaagcat aaaagataaa tcccgtccta ttataaatat ggatagccct
       61 actgctaatg agcttaaaaa gcgtatttta gaacatggga atttatacgc ctaccaaaag
      121 gaatttttac aaagcaatga tacttttagg atagtgttaa aatcacgtca gataggtttt
      181 tcgtatgtga gtagtgcaga tgctcttata ggcgcagttg cggggagaga ccagctcttt
      241 ttatctgcaa gtgaagagca agcccttata ctaatgcggt acatgcggca ctgggcaaag
      301 gagtatggta taagttttaa aaaagatagc gagcacgaag ttgttttaga aaatggagca
      361 tacattaaat cttttgctaa caactttagg accgtacaag gatttgcggg agatatctgg
      421 atggacgagt ttgcctggta tccaaatcca aaacgcattt ggcacgcatt tgtccctagc
      481 ataggagcta taaaaggccg attaaccata ctttcaacgc cgtttgaaga gcgtagcctt
      541 tttcatcaaa tttactcaga taaaactaaa ttccatatgt ttaaaagatt ttgcgtaagc
      601 atatataaag cgatagaaga cggactagat tttgacttag agacgatgag agatctgttt
      661 gacacagata cctgggctag cgcgtatgag tgtcagtttg tagatgacga gagtagcttg
      721 ctttctatat cgctcataaa atcttgcgtg gataacaagg cgcattattt tacgccaaaa
      781 agtagtgaat gtatttacgc aggatatgat gtaggtagag tgagcgatag atctacgcta
      841 gcgggggttg ttttagaaaa tggagtttat aaaactgctt taatggatat actagctaag
      901 gctagatttg
//
LOCUS       DAPPKW010000188          895 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.188, whole genome shotgun sequence.
ACCESSION   DAPPKW010000188 DAPPKW010000000
VERSION     DAPPKW010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 895)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 895)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..895
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.188"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..>895)
                     /locus_tag="RPW04_002016"
     CDS             complement(<1..>895)
                     /locus_tag="RPW04_002016"
                     /inference="COORDINATES: protein motif:HMM:NF024516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3971 domain-containing protein"
                     /protein_id="HDX6296086.1"
                     /translation="TPYLTINTQIENKNKVLIANVSELSLKDFNITINGNLVADLYDN
                     RYYFGGKFRSYELFGDIGLNLKNNILDYNISNVNANSIEKFIDNLAEKTDLHTEIKNW
                     IYGYIIAKEYTLYSLHGKLNLKNFDFYPNELYAKAVAKDLSIKFHENITPVKSNLAYV
                     ELKNDSLFFHLEKPTYMEKPLDGSSVVIRNIIGKNSNMSVNITTNSFLDNDIHAILKA
                     YGIDFPVSQKSGNLDSNLTLDIVFDPFSISSNGEFMLKDANIDIGGADFYTKYANIYL
                     KDNVIKFKNSNLMNNIFDANV"
BASE COUNT          275 a          132 c          119 g          369 t
ORIGIN      
        1 tctacgtttg cgtcaaatat attattcatc aaatttgagt ttttaaattt aattacgttg
       61 tcttttaaat atatatttgc atatttagta taaaaatcag ctcctccgat atctatattt
      121 gcatctttta gcataaactc gccgttgctt gagatggaaa acggatcaaa aactatatcg
      181 agagttaagt tgctatctag atttccgctt ttttgagaaa caggaaaatc tatgccatat
      241 gcttttaaaa tagcgtgtat atcattatct aaaaatgaat ttgtcgttat atttacactc
      301 atattcgagt tttttcctat tatatttctt atcacgacag aacttccatc tagcggtttt
      361 tccatgtatg tcggtttttc aagatgaaaa aacagactat cattttttag ctccacatat
      421 gctaaattag actttacggg ggttatattt tcatgaaatt taatggataa atctttcgca
      481 actgctttgg cgtatagttc atttggataa aaatcaaaat tttttaagtt tagttttccg
      541 tgcagcgaat ataaagtata ttcttttgct atgatatatc cataaatcca gtttttgatc
      601 tctgtgtgaa gatctgtttt ttcagctaga ttatctataa atttttcgat actatttgca
      661 tttacatttg aaatattata atccaatata ttatttttta gatttaaacc tatatctcca
      721 aataactcat atgatctgaa tttaccgcca aaatagtatc tgttgtcata taaatctgct
      781 actaaatttc catttatcgt tatattgaaa tctttaagcg acagttcgct tacatttgct
      841 attaatactt tatttttatt ttctatttgg gtatttatgg taagataagg cgtat
//
LOCUS       DAPPKW010000189          768 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.189, whole genome shotgun sequence.
ACCESSION   DAPPKW010000189 DAPPKW010000000
VERSION     DAPPKW010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 768)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 768)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.189"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(143..340)
                     /locus_tag="RPW04_002017"
     CDS             complement(143..340)
                     /locus_tag="RPW04_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005872544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296087.1"
                     /translation="MSKLKELEVGQRQERDALIAKMFLEEDATEVFKREKRQLQGYDL
                     TPVVVILSSEIRKLRQSSRVL"
     gene            501..>768
                     /locus_tag="RPW04_002018"
     CDS             501..>768
                     /locus_tag="RPW04_002018"
                     /inference="COORDINATES: protein motif:HMM:NF024252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDX6296088.1"
                     /translation="MGYGNQIKAIRIEKDISRVELADMIGVSIKTMYNYENEITKISS
                     EDLQKISNILNYNFMSSNMSSKNNKYVKQSQNLSSNKPLNTPNLK"
BASE COUNT          304 a          131 c           98 g          235 t
ORIGIN      
        1 caaaacgcta aagagcaact agctataaaa attttagaag aatttggatg ctttaacgaa
       61 gcaatccaaa tatcctctaa aaaatcatta gagccacact cactgcctca agatagtgta
      121 gaatatatca caaataggta tattacagca ctcgagatga ttgacgaagt ttgcgaatct
      181 cgctagacaa aatcacaact acaggggtca aatcgtaccc ttgtagttgt ctcttttctc
      241 tcttaaacac ctctgtagca tcttcttcta aaaacatctt agctattaaa gcgtctcttt
      301 cttgacgctg ccccacttct agctctttta acttactcat tttatctcct taaaatttgg
      361 tttaacaata aaaatttaaa tagcatttgt taaatttatc tttttgtgat acaattttct
      421 aaacaaacat tgaaattata cagtaaaatt ttaccgttgt caatataaaa cggaaatatt
      481 ttacattaat aaggtaaaaa atgggatacg gcaatcagat aaaggcaata agaatagaaa
      541 aagatatatc aagagtagaa ttagccgata tgataggtgt tagtataaaa actatgtata
      601 actacgaaaa tgaaataacc aaaatatcaa gtgaagattt acaaaaaata tctaatattt
      661 taaattataa ttttatgtcc agcaatatgt ccagcaaaaa taataaatat gtcaagcaat
      721 cccaaaattt gtccagcaat aagcctttaa acactccaaa ccttaaaa
//
LOCUS       DAPPKW010000190          750 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.190, whole genome shotgun sequence.
ACCESSION   DAPPKW010000190 DAPPKW010000000
VERSION     DAPPKW010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 750)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 750)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.190"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..>750
                     /locus_tag="RPW04_002019"
     CDS             <1..>750
                     /locus_tag="RPW04_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase family
                     protein"
                     /protein_id="HDX6296089.1"
                     /translation="IYVLMPNNLNLFLAKFAFSNHIITISHYKNSSLFYLLSKNAKVI
                     HHTKEDLTLKTYLKMLDLELFQNELQKDMIKVKKMVQKPLFIPEKYENLFINENKFKI
                     GLSLSAGNKMKTIIPQTWDKIFEILSKFDVEIYIFGVGDEINLLKNTNTKNIKIVSLV
                     DKISLNELPFYISKMNLYISSDTGNYYIADTMEVPTICFMGPCFASEQRGVFNSLIIK
                     SNLPPFSAVFDTIYKADAKKYFEITQKDEKN"
BASE COUNT          304 a          110 c          100 g          236 t
ORIGIN      
        1 aaatttatgt tttgatgcca aataatctaa atttatttct agctaaattc gctttttcaa
       61 atcatataat tacgatcagt cactacaaaa acagttctct tttttaccta ctttcaaaaa
      121 atgccaaggt tattcaccat acaaaagaag atttaacgct taaaacatac ttaaaaatgc
      181 ttgatttaga actttttcaa aatgagcttc aaaaagatat gattaaagtt aaaaaaatgg
      241 ttcaaaaacc actatttata cccgaaaagt atgaaaattt atttataaat gagaataaat
      301 tcaaaatcgg attgagtctt agtgccggaa ataaaatgaa aacgataatt cctcaaacat
      361 gggataaaat atttgaaata ttaagcaaat tcgatgttga aatttacatt tttggagtcg
      421 gagatgagat aaatttactt aaaaatacca acacaaaaaa tataaaaata gtatcgttag
      481 tagataaaat cagccttaac gaactgcctt tttacatatc aaaaatgaat ctttatatct
      541 caagcgatac cggaaattac tacatcgcag acactatgga agtgcctacc atatgtttta
      601 tggggccttg ttttgcaagc gaacaaagag gcgtatttaa ctcgcttatc ataaaatcaa
      661 atttaccacc gtttagtgct gtttttgata caatttataa agcggatgct aaaaagtatt
      721 ttgaaatcac tcaaaaagat gaaaaaaata
//
LOCUS       DAPPKW010000191          734 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.191, whole genome shotgun sequence.
ACCESSION   DAPPKW010000191 DAPPKW010000000
VERSION     DAPPKW010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..734
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.191"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            106..>734
                     /locus_tag="RPW04_002020"
     CDS             106..>734
                     /locus_tag="RPW04_002020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296090.1"
                     /translation="MITTQTRYLLGQNDKNFVYGDNGNCTRLSSIAKKIVNESYRLEK
                     LKYSRYDTTNFSFNNLYDPQTRQYSWRGEDSYQNQQYDRFINLYNDYMSELKNRDNYM
                     AGLSDEEKYQNIKSSVMIAVERDFTSATGLTFTLDNLQKVKDSFEKDRSDTANMLIDT
                     DILTAIKINKNGTFTLRFNSGREFVVDKLYKDTSKVFEARIELNLNINRL"
BASE COUNT          312 a          104 c          116 g          202 t
ORIGIN      
        1 atgcagcggt tttgctagaa tagataaaat acaaaatact cgaaaaacgc cgctttctac
       61 ttacctaaat ttaaatttat cttaataagt aagcttgtta ataatatgat tacaactcag
      121 actaggtatt tactcggaca aaatgataaa aattttgtgt atggcgataa tggaaattgt
      181 acgcgattaa gttcaattgc caaaaaaata gttaatgaaa gctatagact tgagaagtta
      241 aaatattcca gatatgatac aacaaatttt tcttttaata acttatatga tccacaaacc
      301 aggcagtatt cttggagagg cgaagactct taccaaaatc aacaatacga taggtttata
      361 aatttataca acgattatat gagcgaactt aaaaacagag ataactatat ggcaggtcta
      421 agcgacgaag aaaaatatca aaacataaaa tcaagcgtta tgatagccgt agaaagagac
      481 ttcacatctg cgactggtct aacattcacc ttagataact tacaaaaagt aaaagatagc
      541 tttgaaaaag atagaagcga tactgcaaat atgcttatag acaccgatat actaacagct
      601 ataaaaataa ataaaaacgg aacattcact cttagattta atagtggaag agagtttgta
      661 gtagataaac tatataaaga tacaagcaaa gtatttgaag caaggataga actaaactta
      721 aatataaata gact
//
LOCUS       DAPPKW010000192          707 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.192, whole genome shotgun sequence.
ACCESSION   DAPPKW010000192 DAPPKW010000000
VERSION     DAPPKW010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..707
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.192"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..148
                     /locus_tag="RPW04_002021"
     CDS             <1..148
                     /locus_tag="RPW04_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HDX6296091.1"
                     /translation="ENIEKLEQLRALQSGKKIKMMQIQTKSIGIDTKEDLKTAADKFG
                     FRID"
     gene            201..551
                     /locus_tag="RPW04_002022"
     CDS             201..551
                     /locus_tag="RPW04_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011732073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide-stimulated promoter family
                     protein"
                     /protein_id="HDX6296092.1"
                     /translation="MTNKQFLEQLTTVAKFTQIYCDDHHKNEPKTISKFKTIYKGVNL
                     DKFIEYNLCKECEHLLLYANERLQNCPHKEKPKCRKCPHICYEKNELKHIIKVMKSSG
                     IKLGLSKIKSFFKS"
BASE COUNT          319 a           90 c          100 g          198 t
ORIGIN      
        1 agaaaatata gaaaaactag agcagcttag ggctttacaa agcggtaaaa aaattaaaat
       61 gatgcaaata caaacaaaaa gtatcggaat agatacaaaa gaagatctta agaccgcagc
      121 ggataaattc ggttttagga ttgactaaaa tcaaatttaa ctatataaat ttgtgataca
      181 atagccacga aaaggcaaat atgacaaata aacaattttt agagcaacta acgaccgtag
      241 ccaaatttac acaaatttac tgcgatgatc atcacaaaaa tgagccaaaa actatatcta
      301 aatttaaaac tatttataaa ggagtaaatt tagataaatt tatagagtat aacttatgca
      361 aagagtgtga gcatcttctt ttatatgcca atgagagact acaaaactgt ccacacaaag
      421 aaaaaccaaa atgcagaaaa tgtccacaca tctgttatga aaaaaatgaa ctaaaacata
      481 ttataaaagt gatgaaaagt agcggaataa agcttggatt atcaaagata aaatcatttt
      541 ttaaaagtta gtatatatac tagattaagt tattttgtga tatcataaaa taaaaaatat
      601 gaaacaaatt atacaagaaa tcaaattaga atcagcacaa aacgtatatc ataaactact
      661 tgtgatatat ttattgttgc tatttgcata ttgcattgta tttgctt
//
LOCUS       DAPPKW010000193          671 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.193, whole genome shotgun sequence.
ACCESSION   DAPPKW010000193 DAPPKW010000000
VERSION     DAPPKW010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.193"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            13..366
                     /locus_tag="RPW04_002023"
     CDS             13..366
                     /locus_tag="RPW04_002023"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296093.1"
                     /translation="MKNTSPLSKDEVVKHIDKTGVERYANKKTFNHSISSNKRKISSS
                     DSVKALNSILKIAPHKDYQNRSVAISQNGYFMIFNGDYLYNIFKPSRNLEKYFKDSAV
                     LNKVEIIKWKFSIFA"
     gene            342..659
                     /locus_tag="RPW04_002024"
     CDS             342..659
                     /locus_tag="RPW04_002024"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296094.1"
                     /translation="MEIFNICLAHGWAIESVKNGNFGENAKYDLFAQFDVFYGQIAWI
                     YDICTPSDETIKECEKIAIFKQMCEFNVYISDDNDEGWTKKVNFTGTFIDALEYIKAN
                     FGK"
BASE COUNT          255 a           85 c          138 g          193 t
ORIGIN      
        1 gatggagtaa agatgaaaaa tacaagcccg cttagcaaag atgaagtagt aaagcatata
       61 gataaaactg gggttgagag atatgctaat aaaaagactt ttaatcacag cataagctca
      121 aataagcgaa aaatttcaag tagcgatagc gtaaaagcac ttaactctat tttaaaaata
      181 gcgccgcaca aggattatca aaatcgaagc gtggctatca gtcaaaatgg gtattttatg
      241 atttttaacg gagattattt gtataatatt tttaagccaa gcagaaattt ggaaaagtat
      301 tttaaagaca gtgcagtttt aaataaagtg gagataataa aatggaaatt ttcaatattt
      361 gcctagcaca cggctgggcg attgagagcg ttaaaaatgg caactttgga gaaaatgcaa
      421 aatatgatct ttttgctcag ttcgatgtgt tttacggtca gattgcatgg atttatgaca
      481 tctgcacacc aagcgatgag acaataaaag agtgtgaaaa gatagctatt tttaagcaaa
      541 tgtgcgagtt taatgtgtat atctctgatg ataatgatga gggctggacc aaaaaagtta
      601 acttcacagg tacttttata gacgctttag aatatatcaa agcaaatttc ggcaagtaaa
      661 atttataagt t
//
LOCUS       DAPPKW010000194          614 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.194, whole genome shotgun sequence.
ACCESSION   DAPPKW010000194 DAPPKW010000000
VERSION     DAPPKW010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 614)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 614)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..614
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.194"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            83..>614
                     /locus_tag="RPW04_002025"
     CDS             83..>614
                     /locus_tag="RPW04_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HDX6296095.1"
                     /translation="MLNKTDVSMLYITIMGMASEGDGNKYWLDYANNNSLGVSSLANI
                     MLDSPGAAKFFGDSLLAGNEKDFVTKIYSIALGNTSDVDGINYWTKAITGGGEFTDSK
                     GNVISVASLSKGDLIGAMINSMVNGGSAESKAIFEAKAAASDYFADATLGKDISGLDE
                     GTTSKLISEINSASDLD"
BASE COUNT          180 a           58 c          148 g          228 t
ORIGIN      
        1 agtatttagt atatagataa ctatatatat ggttggttgc ttttgctggt gattttattt
       61 tattttatta aggagtcctt aaatgttaaa caaaacagat gtttcaatgc tttatatcac
      121 tattatgggt atggcaagtg agggtgatgg taataagtat tggttagatt atgccaataa
      181 taatagttta ggagtttcaa gtttagctaa tattatgctt gatagtccag gggcggctaa
      241 attctttggt gattctcttt tagcaggtaa tgaaaaagat tttgttacta agatatatag
      301 tatagcttta ggtaatacta gtgatgttga tggcattaat tattggacta aggcaataac
      361 tggcggtgga gaatttactg atagtaaggg taatgttatt agtgttgcta gtttaagcaa
      421 gggtgattta ataggtgcta tgattaactc tatggttaat ggcggtagtg ctgagtctaa
      481 ggctatattt gaggctaagg cagctgctag tgattacttt gccgatgcta ctttgggtaa
      541 ggatattagt ggattagatg agggtactac ttctaagtta attagcgaga ttaatagtgc
      601 tagtgatctt gata
//
LOCUS       DAPPKW010000195          612 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.195, whole genome shotgun sequence.
ACCESSION   DAPPKW010000195 DAPPKW010000000
VERSION     DAPPKW010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 612)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 612)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..612
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.195"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..326
                     /locus_tag="RPW04_002026"
     CDS             <1..326
                     /locus_tag="RPW04_002026"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296096.1"
                     /translation="THLNAREITSNFIKQFASILNEGGSIFANWRTRKDSLYKRGKEI
                     DGDTFIIDEESHKGMLYYFPNLDEIEKIYESVGLKITSKDYEEFSTNDGNIINSWHII
                     EAKKV"
     gene            336..>612
                     /locus_tag="RPW04_002027"
     CDS             336..>612
                     /locus_tag="RPW04_002027"
                     /inference="COORDINATES: protein motif:HMM:NF019846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDX6296097.1"
                     /translation="MKNSFKDYETNLAKWEELVLNGDLIYPNEHVVRFIFKNKFQSAL
                     DFGCATGRHLECLNRAGVKKIIGVDINQKPLEVAFARLNECVEMGGVG"
BASE COUNT          242 a           75 c          125 g          170 t
ORIGIN      
        1 taacacatct aaacgcaaga gagataactt caaatttcat taaacagttt gcgtctattt
       61 taaatgaagg cggaagcata tttgccaact ggagaaccag aaaagactct ttatataaaa
      121 gaggaaaaga gatagatgga gatacgttta tcatagatga agagtctcac aaaggaatgc
      181 tttattactt cccaaattta gatgaaatag aaaaaattta tgagagtgtc ggcttaaaaa
      241 taaccagcaa agattatgaa gaatttagta caaatgatgg taatataata aattcatggc
      301 atattatcga agctaaaaag gtttaaggaa atttaatgaa aaatagtttt aaagattacg
      361 aaacaaattt agcaaaatgg gaagaacttg ttttaaatgg cgatttaata tatccaaacg
      421 agcatgtcgt gcgttttatt tttaaaaata aatttcaaag tgcgcttgat tttgggtgcg
      481 ctacaggaag acatcttgaa tgcttaaata gagccggagt aaagaaaata atcggcgtag
      541 atatcaacca aaagcctctt gaagtagctt ttgcaagact aaatgagtgc gtagaaatgg
      601 ggggggtagg ct
//
LOCUS       DAPPKW010000196          608 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.196, whole genome shotgun sequence.
ACCESSION   DAPPKW010000196 DAPPKW010000000
VERSION     DAPPKW010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 608)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 608)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.196"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            1..608
                     /locus_tag="RPW04_002028"
                     /pseudo
     CDS             1..608
                     /locus_tag="RPW04_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002344163.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
BASE COUNT          198 a           99 c          138 g          173 t
ORIGIN      
        1 tagtgcttct ggattttccc aagatatcaa agaagcgccg gctactataa acgttattga
       61 taaaaaagca ctacaaagca aaccgtatcg tgatatcgcc gaagttatat cggatattcc
      121 gggagttgat ctatatgcta gtaaaggtaa aaccggagct tataatatca ctatgcgcgg
      181 gataactggc tatacgttag ttctcataaa cggcagacgt caaagcgttg gcggcgagta
      241 ggtccaaatg gttttagtga agtttcaaat gctcttttac cgccgctttc tagtatagaa
      301 agaatcgaag tcataaaagg tcctatgtct actttatatg gatctgaggc tcttggcggc
      361 gttgtaaata taattacaaa aaaagtaggc gataagtggg gagcatcttt tagcctagat
      421 actatgataa atgaagatag tagctgggga aatacttatg gaaccggtat ttatgctagt
      481 ggtccattat tagataataa attaggatta gatcttcgtt ttagaaactc atatagagag
      541 cagtcaaagg ttgaatttac aaacggttct ggtcaaagag tagcaggaga tcaagctcaa
      601 agtcctac
//
LOCUS       DAPPKW010000197          582 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.197, whole genome shotgun sequence.
ACCESSION   DAPPKW010000197 DAPPKW010000000
VERSION     DAPPKW010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 582)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 582)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..582
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.197"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            46..570
                     /locus_tag="RPW04_002029"
     CDS             46..570
                     /locus_tag="RPW04_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDX6296098.1"
                     /translation="MKTLIILSHPDIENGVFNKKLRNEVLKNTSDVQIHELYKVYTGF
                     DFDIKKEQKLLESYEKIIFQFPLYWYSCPSLLKKYFDDIFEHGWAYGSNADKLKGKIF
                     GLCISAGGSKQDFDKSGEVGFSMEEILTPFKATAKFVGAKFMNSFITFEVEPQMSEEK
                     LKTRAKEYLEYLKK"
BASE COUNT          235 a           84 c           95 g          168 t
ORIGIN      
        1 tttaaagtat aattcaaaca tcaatctata aaaaaaggaa aagcaatgaa aactttgatc
       61 attttatcgc acccagatat agaaaacgga gtttttaaca aaaaactaag aaacgaagtt
      121 ctaaaaaaca cctcagacgt acaaatacac gaactttaca aagtctatac aggatttgat
      181 ttcgatataa aaaaagagca aaaactttta gaaagctatg agaaaattat tttccaattt
      241 ccgctatatt ggtactcttg tccttcttta cttaaaaaat actttgatga catttttgag
      301 catggttggg catatggaag caacgcagat aaattaaaag gtaaaatttt cgggctatgc
      361 ataagcgctg gcggaagcaa acaagacttt gataaaagcg gcgaagtagg atttagcatg
      421 gaagagatat taactccttt taaagctact gctaaatttg tcggagctaa atttatgaac
      481 tctttcataa cttttgaagt agagcctcaa atgagtgaag aaaaattaaa aactcgagca
      541 aaagagtatt tagaatatct taaaaaatag ttcttatact ta
//
LOCUS       DAPPKW010000198          581 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.198, whole genome shotgun sequence.
ACCESSION   DAPPKW010000198 DAPPKW010000000
VERSION     DAPPKW010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.198"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            183..>581
                     /locus_tag="RPW04_002030"
     CDS             183..>581
                     /locus_tag="RPW04_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HrcA family transcriptional regulator"
                     /protein_id="HDX6296099.1"
                     /translation="MKVDKRDLILESIIHAYLEANEPIGSSELGTRMSTSIPASTIRV
                     YFKKLSDEGAITQLHISGGRIPTVPTMQFYWQNRLKFDDNFIINDSDILNFLVYDFGI
                     YCMIFGAGKLTLKEILNLKDRFLVLDFESES"
BASE COUNT          203 a           66 c          110 g          202 t
ORIGIN      
        1 taaatacgtt tgtttttacg ctataatata tattttatac gaaaaaacgt gtatgtagtc
       61 taaatttatg ttgatagata taaatttttg caaatatttt aatattttta tttaaaagac
      121 ttgacaaaga taggctcaat gttgtataat tcacttagca attgaatagg aagagtgcta
      181 agatgaaggt agataaaaga gatctaatat tagaatcaat catacatgct tacttagaag
      241 caaatgagcc tataggctca agcgaacttg gaacgcgtat gagtactagt ataccggcat
      301 ctacgattag ggtttatttt aaaaagttaa gcgatgaggg agctataact cagcttcaca
      361 taagcggcgg acggattcct acagttccaa ctatgcagtt ttactggcaa aatagactta
      421 aatttgatga taattttatc ataaatgata gtgatatttt aaattttttg gtctatgatt
      481 ttggtattta ctgtatgatt tttggcgcag gaaaactaac attgaaagag atcttgaatt
      541 tgaaagatag atttttagtt ctggattttg aaagcgagag t
//
LOCUS       DAPPKW010000199          572 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.199, whole genome shotgun sequence.
ACCESSION   DAPPKW010000199 DAPPKW010000000
VERSION     DAPPKW010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.199"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(114..>572)
                     /locus_tag="RPW04_002031"
     CDS             complement(114..>572)
                     /locus_tag="RPW04_002031"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HDX6296100.1"
                     /translation="SVKGSLGADTITVVSENKAVAIDLGKDTAVDKVDVSSTKISDKT
                     NDASIKADLVSITNALSGDQIVLKGATSIKDRGDLSGEANLLAALGKLGEGKDGTLAG
                     TTAEVFTYKGNTYVVDAAGDAVFANNDILIELTGIVTFNDTVDANTITVA"
BASE COUNT          179 a          115 c           76 g          202 t
ORIGIN      
        1 ttaaaaacaa actatagagc agttaaattt aaaacaattc aaggagccta tttaaaggct
       61 cctctagcaa aaaactatct actattttta ttaaggtttt aatcaaaaag tcgttaagct
      121 actgtgattg tattagcatc aacagtgtca ttaaatgtaa cgatacctgt taattctatt
      181 aatatgtcat tattggcaaa tacagcatct cctgcagcat cgactacata agtatttcct
      241 ttataagtaa atacttcagc agtagtacca gctaaagttc catctttgcc ttcgcctaat
      301 tttcctaatg cagctaacaa attagcttcg ccagataaat ctcctctatc ttttatgcta
      361 gtagcacctt ttagtactat ttgatctccg gataaagcgt tagttatact tactaaatca
      421 gcttttatag aggcatcgtt tgtcttatct gatattttag ttgagcttac atctacctta
      481 tctaccgcag tatcttttcc taaatctata gctactgctt tattttcaga taccactgtg
      541 atagtatcgg cacctaagct acccttaaca ga
//
LOCUS       DAPPKW010000200          564 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.200, whole genome shotgun sequence.
ACCESSION   DAPPKW010000200 DAPPKW010000000
VERSION     DAPPKW010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 564)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 564)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..564
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.200"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..264)
                     /locus_tag="RPW04_002032"
     CDS             complement(<1..264)
                     /locus_tag="RPW04_002032"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296101.1"
                     /translation="MNSKLMSRVGNDFFSVFSEQSQENEIIENNELFFSSTTVSNEHS
                     YISNPQRGNLEQDEWFYMDFSSIIFGKDLLNMFDIFDNTGRYSN"
BASE COUNT          209 a           87 c           56 g          212 t
ORIGIN      
        1 atttgaatat ctgcccgtat tatcaaaaat atcaaacata tttaacaaat ctttgccaaa
       61 gattatactg ctaaaatcca tataaaacca ttcatcttgc tcaagatttc ctctttgcgg
      121 attactgata taactatgtt cattggatac cgtggtgctt gagaaaaaca attcattgtt
      181 ttcaataatc tcattctctt gagattgctc actaaataca ctaaaaaaat catttccaac
      241 cctagacatc aattttgaat tcattaattt tcctttattt tataaaatgt attttcatct
      301 attttaatca agctatctat tttcattgta tttttgagtt cattaatttt atctgcaatt
      361 attatgaaat ttgaattttc agattcaact ttataaactc gttttccaat aagatataaa
      421 aatggattta aatacccaat attattaata tggaaaatat aaaaaagaaa taagacaata
      481 attatctttc cgattagact tgtttctaca attgaatttg tatgtgtcaa aaatgacata
      541 gaaaaagtta caacacaaac ggca
//
LOCUS       DAPPKW010000201          546 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.201, whole genome shotgun sequence.
ACCESSION   DAPPKW010000201 DAPPKW010000000
VERSION     DAPPKW010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..546
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.201"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            44..286
                     /locus_tag="RPW04_002033"
     CDS             44..286
                     /locus_tag="RPW04_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296102.1"
                     /translation="MDKNYNKFQRAYEVMTELTKEPILFEPAELSNINSKELNYLKET
                     LELMANYMDILGFELKGIKKEILMPIYDELEKRSYK"
BASE COUNT          252 a           61 c           77 g          156 t
ORIGIN      
        1 tttacaaaat gtcggtcagc atataataaa gaaaggataa aatatggata aaaattataa
       61 taaatttcaa agagcctatg aagttatgac agaactaaca aaagagccaa tcctatttga
      121 accagcagag ctaagtaata taaacagcaa agagctaaac tacttaaaag agacattgga
      181 gctaatggca aattatatgg atatattggg ctttgagtta aaaggaataa aaaaagaaat
      241 tttaatgcca atttatgatg aattggaaaa aagaagctat aaataagcta ttaatacact
      301 ataaataaag ttatatacaa gctttaaata agcaattata taagctaaaa acaagctata
      361 attaaactaa ttttcattga aactgcaaaa ttttaaaata aaatacaaac gattatcata
      421 aaataaaagg gaaaagaaaa actatagaag taaaagctag acaacaagca caaaagctcg
      481 ttttttagat tttaaagttt agttaagttt ttaaaaattg gcttttactc cctttttatc
      541 gtgctt
//
LOCUS       DAPPKW010000202          513 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.202, whole genome shotgun sequence.
ACCESSION   DAPPKW010000202 DAPPKW010000000
VERSION     DAPPKW010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..513
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.202"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            65..382
                     /locus_tag="RPW04_002034"
     CDS             65..382
                     /locus_tag="RPW04_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002952520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296103.1"
                     /translation="MKKILKNLKRFYWFLTCSPAFLFGAGGSTNILKTLTTSANEQIT
                     ESGSSLASITNTVAIVFGVLWIIVMLLGLFFNMEAIKNHSKLIFGALVIIGIVYGLSA
                     KAM"
BASE COUNT          188 a           57 c           77 g          191 t
ORIGIN      
        1 ctacaaaatg ttcctttaat gaatttgata tagttctatt taaattttaa aaaaaggaaa
       61 aataatgaaa aaaattttaa aaaatctcaa aagattttat tggtttttaa cttgttctcc
      121 tgcatttctt tttggagctg gtggtagtac aaatatacta aaaactttaa caacatctgc
      181 aaatgaacaa attacagaat caggtagtag tttggcaagt atcactaata ctgtggcaat
      241 tgtatttggt gtactttgga ttatagttat gctattaggt ctatttttta atatggaagc
      301 cataaaaaat cactcaaaac ttatctttgg tgcattggtt atcattggta ttgtttatgg
      361 attatctgca aaagcaatgt agataggaaa ataaaatgat agtaacaaac tgctatatgg
      421 atctaactaa aaaaacaaaa atagtaggtt taacaaccac aagcttattt attttaatta
      481 tatttggatt tatagcttgg tttattttgc ttt
//
LOCUS       DAPPKW010000203          487 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.203, whole genome shotgun sequence.
ACCESSION   DAPPKW010000203 DAPPKW010000000
VERSION     DAPPKW010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..487
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.203"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..>487
                     /locus_tag="RPW04_002035"
     CDS             <1..>487
                     /locus_tag="RPW04_002035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HDX6296104.1"
                     /translation="EGTNAVTIDSENLATINYKAGTEAAEIKGNLTATKATNLTVNTD
                     ALANITNTGATLTANSATSMSLNINAEKTAQSLKLSATKLKDLAVVNKSVDGFTIKGD
                     ANSLDALSNLNVTTDGKFSFDTITGLAGVSTVTLSGANDKSAVTLGDLGSDKVTQGIA
                     LN"
BASE COUNT          196 a           89 c           86 g          116 t
ORIGIN      
        1 tgaaggtaca aatgcagtaa ctatagatag cgaaaactta gctactataa attacaaagc
       61 aggtacggaa gcagctgaaa taaaaggaaa cttaacagcc actaaagcta caaatcttac
      121 cgtaaataca gacgctttag caaacattac aaacacaggc gctactctaa ctgcaaattc
      181 agctactagc atgtcattaa acatcaatgc agagaaaact gctcaaagct taaagctaag
      241 tgcaactaaa ctaaaagatc tagcagttgt aaacaaatca gtagatggat ttactataaa
      301 aggagatgca aatagcttag atgcattatc aaatttaaac gtaactacag acggtaaatt
      361 ttcatttgat actataaccg gattagcagg agttagcacc gttactctaa gtggtgcaaa
      421 cgataaatca gcagttacac taggcgattt aggttcagac aaagttactc aaggcatagc
      481 gctaaat
//
LOCUS       DAPPKW010000204          470 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.204, whole genome shotgun sequence.
ACCESSION   DAPPKW010000204 DAPPKW010000000
VERSION     DAPPKW010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 470)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 470)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..470
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.204"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(53..>470)
                     /locus_tag="RPW04_002036"
     CDS             complement(53..>470)
                     /locus_tag="RPW04_002036"
                     /inference="COORDINATES: protein motif:HMM:NF012920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HDX6296105.1"
                     /translation="PYFEDTYASAGSGIINYDETPIVMSFDINFLRVFLKITGSLNNL
                     HIINAKGDSMEPTINGGELLYINPYDNEQSVISGCIYVINYDGDIFVKRVDKNPVTKS
                     LTLISDNPKYEPIKIEATDLINCKIIGRVVAHTSRI"
BASE COUNT          156 a           83 c           59 g          172 t
ORIGIN      
        1 cataaacttt acaaagtttt taaaaaccat ttaaaagccc attaaatcgc ttttaaatcc
       61 tagaagtatg agctactact cttcctatta ttttgcaatt tattaaatct gttgcttcta
      121 tcttaatagg ttcatacttt gggttatcgc taatgagcgt aagagatttt gtgactggat
      181 ttttatctac tcttttgaca aaaatatcgc catcatagtt tatcacatat atacacccac
      241 taataacgct ttgttcatta tcgtaaggat ttatatataa tagttccccg ccgtttatag
      301 taggctccat gctatcacct tttgcgttta taatatgtag gttatttaaa gaaccagtaa
      361 tctttaaaaa tacacgcaaa aaatttatat caaaactcat gacaatagga gtttcatcat
      421 aatttataat tccagatcct gcactagcgt aagtatcttc aaaataaggt
//
LOCUS       DAPPKW010000205          462 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.205, whole genome shotgun sequence.
ACCESSION   DAPPKW010000205 DAPPKW010000000
VERSION     DAPPKW010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..462
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.205"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..>462
                     /locus_tag="RPW04_002037"
     CDS             <1..>462
                     /locus_tag="RPW04_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDX6296106.1"
                     /translation="NQILILDIKYGFVGEVYLNENNNTTRLDFGMPLKNGDKFNIFDL
                     DTGIENLSNGASNVKALIKASKEYGYSDIFVTSDAKPFDFMIDSDNSGDKSTGKTGIH
                     LTYNNPLNINDSIRFSFIKGLLKDMRNESEDIYGVNYTLPVQSYQLNYSLQ"
BASE COUNT          169 a           54 c           80 g          159 t
ORIGIN      
        1 aaaatcaaat tcttatactt gatataaaat acggatttgt aggagaagtg tatttaaatg
       61 agaataataa tacaacaagg cttgattttg gtatgccttt aaaaaatggg gataaattta
      121 atatttttga tttagatacc ggtatagaaa atttaagcaa tggcgcaagc aatgtaaaag
      181 ctttgataaa agcaagcaag gaatacggct attcggatat ttttgtcaca agtgacgcca
      241 agccttttga ttttatgatt gattctgata atagtggtga taaatctaca ggcaagaccg
      301 gtattcatct aacttataat aatcctttaa atatcaatga ttctatacgt tttagtttta
      361 tcaaaggttt attaaaagat atgcgaaatg aaagtgaaga tatttacggt gttaattata
      421 ctttgcctgt acaaagttat cagttaaatt actccttgca at
//
LOCUS       DAPPKW010000206          454 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.206, whole genome shotgun sequence.
ACCESSION   DAPPKW010000206 DAPPKW010000000
VERSION     DAPPKW010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 454)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.206"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..116
                     /locus_tag="RPW04_002038"
     CDS             <1..116
                     /locus_tag="RPW04_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="portal protein"
                     /protein_id="HDX6296107.1"
                     /translation="SFKDDGEIVTTLVGSGILSIEEARSILGWQKNIKTYF"
     gene            207..>454
                     /locus_tag="RPW04_002039"
     CDS             207..>454
                     /locus_tag="RPW04_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010404288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDX6296108.1"
                     /translation="MTYTKEFKEECINFLKSGVSALALSKQTGVSRPTLAKWLKTYEK
                     ENFSIENAIKFTKQKIEELSKKASPTSDDVVMLSELISA"
BASE COUNT          189 a           62 c           93 g          110 t
ORIGIN      
        1 ctagctttaa agatgatggg gagatagtaa caactctagt tggaagtgga attcttagca
       61 tagaagaagc tagaagtata ttagggtggc aaaagaatat taaaacatac ttttaaacgc
      121 ttttaaaagg cgtttaaaaa cgtttaaaag gctttagggc ttatcggtat aagtattaag
      181 gtaaaaaatg caaaaaaagg agaattgtga catatacaaa agagtttaaa gaagagtgta
      241 taaactttct taaaagtgga gtttcagctc tagcactctc aaagcaaaca ggagtaagca
      301 gaccaacgct tgcaaagtgg ctaaagactt atgaaaaaga gaactttagc atagaaaatg
      361 ccattaaatt cacaaaacaa aagatagaag aattaagcaa aaaagctagt ccaactagcg
      421 acgacgtcgt tatgctaagc gaactcatat cagc
//
LOCUS       DAPPKW010000207          450 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.207, whole genome shotgun sequence.
ACCESSION   DAPPKW010000207 DAPPKW010000000
VERSION     DAPPKW010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 450)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 450)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.207"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            206..>450
                     /locus_tag="RPW04_002040"
     CDS             206..>450
                     /locus_tag="RPW04_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010404288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDX6296109.1"
                     /translation="MTYTKEFKEECVNLLKSGVSALALTRQTGVSRPTLAKWLKTYEK
                     ENFSIDNAINFTKKKIEELSKNDQTPQGVVMLSELVSA"
BASE COUNT          183 a           58 c           97 g          112 t
ORIGIN      
        1 ctagctttaa agatgatgga gagatagtaa caactctagt tggaagtgga attcttagca
       61 tagaagaagc tagaagtatt ttaggttggc aaaagaacat ttaaactagt ttttaaatgc
      121 ttttaaaagg cgtttaaaaa cgtttaaaag gcttttatgc ttatcggtat aagtattaag
      181 gtaaaaaatg caaaaaaggc gaattgtgac atatacaaaa gagtttaaag aagagtgcgt
      241 aaatttgcta aaaagcggag taagcgcatt agcactaaca aggcaaacag gagtaagcag
      301 accaacgctt gcaaagtggc taaagactta tgaaaaagag aattttagca tagataacgc
      361 aataaacttt accaagaaaa agatagaaga gcttagcaaa aatgaccaaa ccccacaagg
      421 agtggttatg ctaagtgagc ttgtatctgc
//
LOCUS       DAPPKW010000208          441 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.208, whole genome shotgun sequence.
ACCESSION   DAPPKW010000208 DAPPKW010000000
VERSION     DAPPKW010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..441
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.208"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(194..441)
                     /locus_tag="RPW04_002041"
                     /pseudo
     CDS             complement(194..441)
                     /locus_tag="RPW04_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004087517.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
BASE COUNT          161 a           73 c           41 g          166 t
ORIGIN      
        1 tctcgcgttg atttttttga caaatatctt ataaaaatat acaataaaaa atttataaaa
       61 aaagacaaaa ataaccatgc caatgaaaaa actatttcat actcaaatat ttttatatta
      121 aattttatat cattaactat caaaaaaagc ataacaatcc atacaaatga tgctaaattc
      181 aataaaaact ttatcatacc cttaccctga cctttcctgt tagtagattt tgcattaagc
      241 cctgcttttg gagctttaaa ttcgataact tatctttgag taaatttatc tcatcatcac
      301 aagcacttag aacttctgct attttttgtt gctcctttaa cggcggaagc gggatttata
      361 aatattgata ttctgaaatc caatatcttt tatgatcttc tgtactaaat tttattaact
      421 ccatagtttc ataaattatt t
//
LOCUS       DAPPKW010000209          433 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.209, whole genome shotgun sequence.
ACCESSION   DAPPKW010000209 DAPPKW010000000
VERSION     DAPPKW010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..433
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.209"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            115..189
                     /locus_tag="RPW04_002042"
     tRNA            115..189
                     /locus_tag="RPW04_002042"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:147..149,aa:Gln,seq:ttg)
     gene            202..276
                     /locus_tag="RPW04_002043"
     tRNA            202..276
                     /locus_tag="RPW04_002043"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:234..236,aa:Met,seq:cat)
BASE COUNT          157 a           76 c           61 g          139 t
ORIGIN      
        1 ctaaaaaccc ataattttaa atccagctca ttttacttat aaaattatgt atattcacaa
       61 aaaaaccttg acaaaaaagc aaaaaaatta tataatagcg gctcattttg aggttggggt
      121 atagccaagc ggtaaggcaa ctggttttgg tccagtcatt cagaggttcg aatcctctta
      181 ccccatccaa cttctatttg tcgcgagata gagcagtggt agctcgtcgg gctcataacc
      241 cgaaggtcgg aggttcaagt ccttctctcg caaccaaaaa tctataaaat catcatttca
      301 ataattaacc ctatttatat cactcaacat aaatttccag aatttgaaat aaaatttaca
      361 aggctattaa aattttaatt ttatgtgtgt aatttatact aaattatttt aatattatta
      421 gaaatgaaaa ata
//
LOCUS       DAPPKW010000210          393 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.211, whole genome shotgun sequence.
ACCESSION   DAPPKW010000210 DAPPKW010000000
VERSION     DAPPKW010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..393
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.211"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..>393)
                     /locus_tag="RPW04_002044"
     CDS             complement(<1..>393)
                     /locus_tag="RPW04_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002849061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="portal protein"
                     /protein_id="HDX6296110.1"
                     /translation="DLAIIYENAEPSEEQIKAFENFFGSNFRGYNNSHKTLIIYGENS
                     ANDKDAKIRFEELGRVSDLSFKELKSVTRDEIAVAHAIPPRLLGIVQGSALGGSGELS
                     GQLQMFNELEIKPKIEMIESFFTNIGVKV"
BASE COUNT           96 a           89 c           68 g          140 t
ORIGIN      
        1 tacttttact cctatgtttg taaaaaagct ctctatcatc tctatttttg gtttaatttc
       61 tagctcgtta aacatttgga gctgaccgct tagctcgcca ctaccgccaa gagcagagcc
      121 ttgtactatg cctaaaagac gcggaggaat ggcgtgagcg actgctattt catccctagt
      181 tacgcttttt aactctttga agctaagatc acttaccctt cctagctctt caaagcggat
      241 tttagcgtct ttgtcatttg cactgttttc tccataaatt ataagggtct tgtgtgagtt
      301 gttataacct ctaaaattgc taccaaaaaa attttcaaac gcctttattt gctcctcgct
      361 tggctctgcg ttttcataaa ttatggcaag gtc
//
LOCUS       DAPPKW010000211          362 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.212, whole genome shotgun sequence.
ACCESSION   DAPPKW010000211 DAPPKW010000000
VERSION     DAPPKW010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 362)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 362)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.212"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            50..>362
                     /locus_tag="RPW04_002045"
     CDS             50..>362
                     /locus_tag="RPW04_002045"
                     /inference="COORDINATES: protein motif:HMM:NF024252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDX6296111.1"
                     /translation="MIGNKIRTLREENGISQKEFAKELGIAYGTLQSYEYGTTKPKTD
                     FIEQLAKKFKIDVNYFYDDCRQYVVNMSSKSSSKNKKLSSIVRQSQNLSSNKPLNTSN
                     LK"
BASE COUNT          160 a           49 c           53 g          100 t
ORIGIN      
        1 aaataattat gtattgtcaa gagtataaca taaaaaaata ggtaaaaata tgattggtaa
       61 taaaattaga acattaagag aagaaaatgg cattagtcaa aaagaatttg ctaaagaact
      121 tggcatagcg tatggcactt tgcaaagcta tgagtatgga actacaaaac caaaaactga
      181 ctttatagaa caactagcaa aaaaattcaa aatagatgta aattactttt atgatgattg
      241 tcgtcaatat gtcgtcaata tgtcgtcaaa aagttcgtca aaaaataaaa aattgtcgtc
      301 aatagttcgt caatcccaaa atttgtccag caataagcct ttaaacactt caaaccttaa
      361 aa
//
LOCUS       DAPPKW010000212          361 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.213, whole genome shotgun sequence.
ACCESSION   DAPPKW010000212 DAPPKW010000000
VERSION     DAPPKW010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 361)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 361)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..361
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.213"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..141
                     /gene="murD"
                     /locus_tag="RPW04_002046"
     CDS             <1..141
                     /gene="murD"
                     /locus_tag="RPW04_002046"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850187.1"
                     /note="UDP-N-acetylmuramoylalanine--D-glutamate ligase;
                     involved in peptidoglycan biosynthesis; cytoplasmic;
                     catalyzes the addition of glutamate to the nucleotide
                     precursor UDP-N-acetylmuramoyl-L-alanine during cell wall
                     formation; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDX6296112.1"
                     /translation="NKAVENINTVMKIDEIGLLSPACASLDQFKSYAERGDMFKKYVN
                     SL"
     gene            234..309
                     /locus_tag="RPW04_002047"
     tRNA            234..309
                     /locus_tag="RPW04_002047"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:267..269,aa:Phe,seq:gaa)
BASE COUNT          124 a           53 c           56 g          128 t
ORIGIN      
        1 aacaaagccg tagaaaacat aaataccgtt atgaaaatag atgaaatagg gcttttaagt
       61 ccggcttgcg caagcttgga tcagtttaaa agttacgctg aacgcggaga tatgtttaaa
      121 aaatatgtaa attccctttg atatttaaat ttaatcgtta aatttaaata tttttacatc
      181 tttttagcta tttttaagta ttaaataaat ataataacac ttctttttta ggtggttgga
      241 tagctcagtc ggtagagcag cagactgaaa atctgcgtgt cggcagttcg attctgcctc
      301 taaccaccat ctttaaattt cacatttaat caacattaat ttaaaatctt tttaagatta
      361 t
//
LOCUS       DAPPKW010000213          358 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.214, whole genome shotgun sequence.
ACCESSION   DAPPKW010000213 DAPPKW010000000
VERSION     DAPPKW010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..358
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.214"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            75..>358
                     /locus_tag="RPW04_002048"
     CDS             75..>358
                     /locus_tag="RPW04_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002848693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296113.1"
                     /translation="MDLKSNFTGLDSSGVIKGVEKISLLNSGLISRTFDAKGIKDVQT
                     LALNSEKGIEVKNLANIADIELTNLQAANFNVDSIYADKVLDGSADVQNL"
BASE COUNT          126 a           45 c           80 g          107 t
ORIGIN      
        1 gctcacttgc tagtgaaaat actcttaatg caggagatgt tattgatggt ggagcaggaa
       61 gtgatatatt aaaagtggat cttaagagta actttactgg tttagatagt agtggggtta
      121 ttaagggtgt ggagaagata tcattactta atagcggact tatatcaaga acattcgacg
      181 ctaaaggtat caaagacgta caaactttag ctttaaatag cgaaaaaggc atagaagtta
      241 aaaaccttgc aaacatcgcg gatattgaat tgacaaatct tcaagctgct aatttcaatg
      301 tagattctat atatgcggat aaagtgcttg atggttcagc tgatgtgcaa aatttaaa
//
LOCUS       DAPPKW010000214          350 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.215, whole genome shotgun sequence.
ACCESSION   DAPPKW010000214 DAPPKW010000000
VERSION     DAPPKW010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 350)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 350)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..350
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.215"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            complement(<1..321)
                     /locus_tag="RPW04_002049"
     CDS             complement(<1..321)
                     /locus_tag="RPW04_002049"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296114.1"
                     /translation="MSNFNMKIIKAGYPSLDKNIDKYIHKQNPKYILISFFQSNAVAK
                     DTIKLVKFLIKNRYMIIIRLKPGENDFKCYSELDNKSIIYDDGSDDVIHSFENSFTLI
                     TDYSS"
BASE COUNT          107 a           56 c           43 g          144 t
ORIGIN      
        1 actagaataa tctgttataa gagtaaaaga gttttcaaat gaatgaatta cgtcatctga
       61 gccgtcatcg tatattatgc ttttattatc aagctcacta taacatttaa agtcattttc
      121 tcccggtttt agtcttataa tgatcatata tctgttcttg atcaagaatt taactaactt
      181 tatagtatct ttggctactg cattgctttg aaaaaatgat attagtatat attttggatt
      241 ttgtttgtgt atgtatttat ctatattttt atctaaactc ggataaccgg cttttataat
      301 tttcatatta aaattactca ttcccccccc catttgccaa gtataaatcc
//
LOCUS       DAPPKW010000215          314 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.216, whole genome shotgun sequence.
ACCESSION   DAPPKW010000215 DAPPKW010000000
VERSION     DAPPKW010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.216"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..>314
                     /locus_tag="RPW04_002050"
     CDS             <1..>314
                     /locus_tag="RPW04_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011731722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cobalt ABC transporter permease"
                     /protein_id="HDX6296115.1"
                     /translation="LIFIRSNLILFFGLSVFSSANSYAIARAVSNLKLGDKISAVFYF
                     TVKFIDEFKSEFQRIKKTLRARGFKPCSSLFTYKTYGNLVAMLFLIAFHKSQMLEKTF
                     IC"
BASE COUNT          108 a           43 c           48 g          115 t
ORIGIN      
        1 cgcttatttt tataagatca aatttgatct tattttttgg attatcggtt tttagctcag
       61 caaattcata tgccatagca agagccgttt caaatttaaa actaggtgac aagataagcg
      121 ccgtatttta ttttactgtg aaatttatag atgagtttaa atccgagttt caaagaatta
      181 aaaaaacact tagagcaaga ggatttaagc cttgcagctc tctttttact tataaaacat
      241 atggaaattt agttgcaatg ctgtttttaa tagcgtttca taaatctcaa atgttagaaa
      301 aaacatttat atgc
//
LOCUS       DAPPKW010000216          298 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.217, whole genome shotgun sequence.
ACCESSION   DAPPKW010000216 DAPPKW010000000
VERSION     DAPPKW010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 298)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 298)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..298
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.217"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..>298
                     /locus_tag="RPW04_002051"
     CDS             <1..>298
                     /locus_tag="RPW04_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002851362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDX6296116.1"
                     /translation="SSINERAGDVIKQSEDIKSIITIIRDIADQTNLLALNAAIEAAR
                     AGEHGRGFAVVADEVRQLAERTGKSLAEIEANVNILSQGINEMSQSINEQTEAIN"
BASE COUNT          129 a           46 c           62 g           61 t
ORIGIN      
        1 agttctatca atgaaagagc gggagatgtt ataaaacaat cagaagatat aaaaagcatt
       61 ataacaataa tcagagatat agcagatcaa acaaacttac tagcattaaa tgcagctata
      121 gaagcagcca gagccggaga gcacggtaga ggatttgctg ttgttgcaga tgaagtaaga
      181 caactagctg aaagaaccgg aaaatctcta gcagaaattg aagcaaacgt aaacatatta
      241 tctcaaggaa tcaatgagat gagtcaaagc ataaatgagc aaactgaagc aattaacc
//
LOCUS       DAPPKW010000217          292 bp    DNA     linear   BCT 25-SEP-2023
DEFINITION  TPA_asm: Campylobacter fetus subsp. venerealis isolate BS57-03
            SAMN31309404-rid19462943.denovo.219, whole genome shotgun sequence.
ACCESSION   DAPPKW010000217 DAPPKW010000000
VERSION     DAPPKW010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN31309404
            Sequence Read Archive: SRR21927871
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Campylobacter fetus subsp. venerealis
  ORGANISM  Campylobacter fetus subsp. venerealis
            Bacteria; Campylobacterota; Epsilonproteobacteria;
            Campylobacterales; Campylobacteraceae; Campylobacter.
REFERENCE   1  (bases 1 to 292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-SEP-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 22-SEP-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001893603.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001893603.1
            Genome Coverage       :: 75x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/22/2023 23:29:17
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,052
            CDSs (total)                      :: 2,007
            Genes (coding)                    :: 1,979
            CDSs (with protein)               :: 1,979
            Genes (RNA)                       :: 45
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 39
            ncRNAs                            :: 3
            Pseudo Genes (total)              :: 28
            CDSs (without protein)            :: 28
            Pseudo Genes (ambiguous residues) :: 0 of 28
            Pseudo Genes (frameshifted)       :: 19 of 28
            Pseudo Genes (incomplete)         :: 5 of 28
            Pseudo Genes (internal stop)      :: 5 of 28
            Pseudo Genes (multiple problems)  :: 1 of 28
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..292
                     /organism="Campylobacter fetus subsp. venerealis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN31309404-rid19462943.denovo.219"
                     /isolate="BS57-03"
                     /isolation_source="Bull prepuce"
                     /sub_species="venerealis"
                     /db_xref="taxon:32020"
                     /country="Germany: Baden-Wuerttemberg"
                     /collection_date="2003"
                     /collected_by="Friedrich-Loeffler-Institut"
     gene            <1..144
                     /locus_tag="RPW04_002052"
     CDS             <1..144
                     /locus_tag="RPW04_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002850362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDX6296117.1"
                     /translation="PGTKAQPYLEDGLNNYISSSGLAMAKEDLAKDVRNKVLNDIKKA
                     LKL"
BASE COUNT          113 a           38 c           53 g           88 t
ORIGIN      
        1 ccaggcacta aggctcagcc ttacctagaa gatggtttga ataattatat aagtagctcg
       61 gggcttgcaa tggctaaaga agaccttgca aaagatgtaa gaaataaggt cttaaacgat
      121 attaagaagg ctttgaaatt atagcaataa tcaaaggctc taaatgagcg tttgacgcct
      181 ttagtttgga agtattgcgt aaattgaaaa gcttttaaaa actagttaaa aatatataaa
      241 tttctaaaaa catttatata tttagtttaa gctaaatgcg atataattca ca
//
